CcUC11G221590 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC11G221590
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr11: 26048687 .. 26051139 (+)
RNA-Seq ExpressionCcUC11G221590
SyntenyCcUC11G221590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTAAGCTAAGCTCATGTTTTTGTAGCAAATTTTATTTTTTTATTTGAGAACAATAAGTTTAATTGTTGCATATATCAAAGTTACTCTTTGAAATACTACCATCATGGTCATAGGATTTCACCTACCATATAATTTTGTTAATCCGAATGTAGCTTAGTGAATTGGTCACTGGTTAACATTTGAATAGTAGATGTTTCCAACCTCCAACTCACAGTAGTTGAAATTGAAAAAAAAAAAAAAAAAAAAGAATGGTTATATTTAGTTATCAATTAGTATTTCCATGCTTGCCCATGGTCATAAATTGGAGTTTTGCACAAATTTTGATTTATCTTATATCAAATATAGATTTATCTCGTTGGACCTTCCATTCTTAAAATATTGTACAAATATATGTGGAGAAATAGAGAAGTGAAAATCGGGTTGGAACGGTTTGTCGCATTAAGTTGAGTTAAGTTGAATTGGTAATAATTATCTGAAAAGTTAGATTGTCTGCAAAGTTAGATTATTTGTGTTTGGAGTGTAAAGTTAGGTTGAATTGAGCTGAAATATCTGTATTTGTGATGCGAGTTGAGTTGAGTTGAATTAAAAAGTCTGCATTTGGGGATCATAGTTGAATTAAGGGGATCAGAGTTGAGTTAAGATATTTAGTGCAGTTTTTGTAAACAAATTGATTTTAACACTAAAAAAGGTTCATTTTTACGTCTAAGCAAAAATAAATGCCAACATGGGAATCGAAACCCAAAACATAAATCCAAAAAATTTTTAGATCTAAGCAAAATAAATGAAGTAGTAGAAGAAGAATTAGTCAAATCTAAAAATAAAAATTAAAAAAAAAAAAAAAAAGTTCATATATGGTTGATCTTAAAAAAACAGCCAAAGAAATTGAAAAAGAAAAAAGAGGGGTTAAGAAGATGAAGGAAAATAAAACTCATATGAGTTGGAGGAAGAAGAGAAAAGATGAGAAAACACAAACCAGAAGACAAAAGAAGAGAGAAGAAGAGAAGAGTAGTGTGAGAGATGCATGAGGGAGAGAGAAACATAGAGTAATTGAGGAAGTTGGGGATAACCAAAACACATGGGAAAATGAGAGCGGTAAAATGGTGGGTCATTAAATCCACTATTTTATTTTTATTGATGAAATAGTCCAAGTTTGATAACCTATCCAGTCCAACTCAACTCAACTCAACTCAAGTTGGGCTATTAAACACGTCCTAGAGAGTGAGTTTTCTTTGCTCAAACTAGGAAACCAAATGATCTAGTTTCAACTTGTTTAGTAAATTTTTACTTTTAAAAATAATTAAGATGTAAATTTTTTCAACTATATGTTTCATAACTTCTTATACAAATTATCAAAACATGATTATTGTTCTAGTGACTTGATCATAAGTGTTCTTTATGTACTTGCAAAATAGAATCTCAACATTGACGAAATGTGTGTCCCAACACATTTTAATACATAAGTTAGTATAGAGGATGAATATAACGATGCTAAGTTGGATATGGAGATACAATGTCCTAACATTTGCATTTAGACTTTGTTGGTTGGTGTGAGAGGGGAACTTATTTTGTTTTTTAATCCACAAATCTAAATCTAAAAATCATAAAAAAGGTTCATTTGGAATTTGAAATTTTATATGCACATATAATAATAAGTTGAATTCAAAATTGTAACCATTCTTCTAATATTAGGAACTTCTAAACATTTCTCAATTTCTATATAACCATTCATAAATTCAGTTGTAAGTTACTAAATTATAAATTGGAATCGGCATCCCCTTTTCCAGGGTAATATTGAAATAAGAACTTGAGATTTAATAAAGTATCTGTATTAATCAAATATACCAAAAAATAAAAAATGTGAATACAAAAATTCCCTAGAATGAATAAACGAATAAATGTAATTAAATCTTCAAAGCCTATCACTTCTAAACGCCGTCGTTTACGCGTTAAACGAGAGTAGAACAGCCGGAAGTGGACGGATCAAACAGCGCCGGAAGCAGATATTTCCGGCCATTCCGACCATTCGCATTGTAACTCCCACCGGTGACGGAATCGACGAGAAGCTCCCCAGGAAAGCCAGGATAAGAACCCTTGGCAAAGATTCCGGTGCAGGCCGACGCCGCCTCCAGCGGAGCCTCCTTAGGGCCCTGATAGAAGCCATTCCCAAAAGGGTTGGTGGCAGTTCCGGCGAGAAGAGCGGCGAGGTTAATTACAAGACCGTCCATTCCAACGTCGTTGTTGGGTGAGACCAGCGGCGGAGTTTGGGGACCGTACAAGGGCTGGTGGAAGGGCCAGGCGCAGTAACCGGGACATTGGGTTTGGGAATTACCCACCCAGATGTAAGCAAATTTATGGGTCTTTCCCTTAAGGGGAGCTCCGAGAGAGGATCCATGCGAGCCGCATTTGGTGGAACAGAATCCGTCGACAGTGACATCGGCGGCGGTTAA

mRNA sequence

ATGAACCTATCACTTCTAAACGCCGTCGTTTACGCGTTAAACGAGAGTAGAACAGCCGGAAGTGGACGGATCAAACAGCGCCGGAAGCAGATATTTCCGGCCATTCCGACCATTCGCATTGTAACTCCCACCGGTGACGGAATCGACGAGAAGCTCCCCAGGAAAGCCAGGATAAGAACCCTTGGCAAAGATTCCGGTGCAGGCCGACGCCGCCTCCAGCGGAGCCTCCTTAGGGCCCTGATAGAAGCCATTCCCAAAAGGGTTGGTGGCAGTTCCGGCGAGAAGAGCGGCGAGGGGAGCTCCGAGAGAGGATCCATGCGAGCCGCATTTGGTGGAACAGAATCCGTCGACAGTGACATCGGCGGCGGTTAA

Coding sequence (CDS)

ATGAACCTATCACTTCTAAACGCCGTCGTTTACGCGTTAAACGAGAGTAGAACAGCCGGAAGTGGACGGATCAAACAGCGCCGGAAGCAGATATTTCCGGCCATTCCGACCATTCGCATTGTAACTCCCACCGGTGACGGAATCGACGAGAAGCTCCCCAGGAAAGCCAGGATAAGAACCCTTGGCAAAGATTCCGGTGCAGGCCGACGCCGCCTCCAGCGGAGCCTCCTTAGGGCCCTGATAGAAGCCATTCCCAAAAGGGTTGGTGGCAGTTCCGGCGAGAAGAGCGGCGAGGGGAGCTCCGAGAGAGGATCCATGCGAGCCGCATTTGGTGGAACAGAATCCGTCGACAGTGACATCGGCGGCGGTTAA

Protein sequence

MNLSLLNAVVYALNESRTAGSGRIKQRRKQIFPAIPTIRIVTPTGDGIDEKLPRKARIRTLGKDSGAGRRRLQRSLLRALIEAIPKRVGGSSGEKSGEGSSERGSMRAAFGGTESVDSDIGGG
Homology
BLAST of CcUC11G221590 vs. NCBI nr
Match: KAE8818965.1 (hypothetical protein D1007_03168 [Hordeum vulgare])

HSP 1 Score: 59.3 bits (142), Expect = 2.7e-05
Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 0

Query: 11 YALNESRTAGSGRIKQRRKQIFPAIPTIRIVTPTGDGIDEKLPRKARIRTLGKDSGAGRR 70
          Y L++  T+  GR+ +RRKQ+ PA+  I IV   G  +  ++   AR+R + +DS AG  
Sbjct: 8  YRLHQGATSRRGRVVERRKQVLPAMRAITIVARPGGLVHFEVAGVARVRAVAEDSWAGGG 67

Query: 71 RLQRSLLRALIEAIPKRVGGSSGEKSGE 99
           LQR +  AL+  + +RVG  +GE + E
Sbjct: 68 GLQRRVAAALVIPVAERVGRRAGEHARE 95

BLAST of CcUC11G221590 vs. NCBI nr
Match: RWW88377.1 (hypothetical protein BHE74_00002753 [Ensete ventricosum] >RZR80526.1 hypothetical protein BHM03_00006575 [Ensete ventricosum])

HSP 1 Score: 58.2 bits (139), Expect = 6.0e-05
Identity = 32/79 (40.51%), Postives = 45/79 (56.96%), Query Frame = 0

Query: 16 SRTAGSGRIKQRRKQIFPAIPTIRIVTPTGDGIDEKLPRKARIRTLGKDSGAGRRRLQRS 75
          S+  G  R+KQ   Q+ P +  +R+V   GD + E++   AR+  L    GA R RLQR 
Sbjct: 11 SQMYGRRRVKQCSHQVLPPVDPVRVVAGPGDRVHEQVTGMARVSPLPVHPGARRSRLQRR 70

Query: 76 LLRALIEAIPKRVGGSSGE 95
          L R L EA+ KRVG  +G+
Sbjct: 71 LRRPLEEAVVKRVGDDAGQ 89

BLAST of CcUC11G221590 vs. NCBI nr
Match: RWV81170.1 (hypothetical protein GW17_00057436 [Ensete ventricosum])

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-04
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0

Query: 19 AGSGRIKQRRKQIFPAIPTIRIVTPTGDGIDEKLPRKARIRTLGKDSGAGRRRLQRSLLR 78
          +G  R+KQ   Q+ P +  +R+V   GD + E++   AR+  L    GA R RLQR L R
Sbjct: 8  SGRRRVKQCPHQVLPPVDPVRVVAGPGDRVHEQVTGMARVSPLPVHPGARRSRLQRRLRR 67

Query: 79 ALIEAIPKRVGGSSGE 95
           L EA+ KRVG  +G+
Sbjct: 68 PLEEAVVKRVGDDAGQ 83

BLAST of CcUC11G221590 vs. NCBI nr
Match: RRT59362.1 (hypothetical protein B296_00042322 [Ensete ventricosum])

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-04
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0

Query: 19  AGSGRIKQRRKQIFPAIPTIRIVTPTGDGIDEKLPRKARIRTLGKDSGAGRRRLQRSLLR 78
           +G  R+KQ   Q+ P +  +R+V   GD + E++   AR+  L    GA R RLQR L R
Sbjct: 26  SGRRRVKQCPHQVLPPVDPVRVVAGPGDRVHEQVTGMARVSPLPVHPGARRSRLQRRLRR 85

Query: 79  ALIEAIPKRVGGSSGE 95
            L EA+ KRVG  +G+
Sbjct: 86  PLEEAVVKRVGDDAGQ 101

BLAST of CcUC11G221590 vs. NCBI nr
Match: KAB8101767.1 (hypothetical protein EE612_032745, partial [Oryza sativa])

HSP 1 Score: 55.5 bits (132), Expect = 3.9e-04
Identity = 30/89 (33.71%), Postives = 50/89 (56.18%), Query Frame = 0

Query: 9  VVYALNESRTAGSGRIKQRRKQIFPAIPTIRIVTPTGDGIDEKLPRKARIRTLGKDSGAG 68
          VV  L+E    G   +++RR+++FPA+  +R+V   G  + ++    AR+R L   + A 
Sbjct: 9  VVDRLHERGAGGRVGVEERREEVFPAVRAVRVVAGAGGLVHQQRAGVARVRALAVHARAR 68

Query: 69 RRRLQRSLLRALIEAIPKRVGGSSGEKSG 98
          RR LQR     L+E + +RVG  +G  +G
Sbjct: 69 RRGLQRRAALPLVEPVAERVGHRAGHHAG 97

BLAST of CcUC11G221590 vs. ExPASy TrEMBL
Match: A0A444C5F2 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00057436 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.9e-05
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0

Query: 19 AGSGRIKQRRKQIFPAIPTIRIVTPTGDGIDEKLPRKARIRTLGKDSGAGRRRLQRSLLR 78
          +G  R+KQ   Q+ P +  +R+V   GD + E++   AR+  L    GA R RLQR L R
Sbjct: 8  SGRRRVKQCPHQVLPPVDPVRVVAGPGDRVHEQVTGMARVSPLPVHPGARRSRLQRRLRR 67

Query: 79 ALIEAIPKRVGGSSGE 95
           L EA+ KRVG  +G+
Sbjct: 68 PLEEAVVKRVGDDAGQ 83

BLAST of CcUC11G221590 vs. ExPASy TrEMBL
Match: A0A426Z5W2 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00042322 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.9e-05
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0

Query: 19  AGSGRIKQRRKQIFPAIPTIRIVTPTGDGIDEKLPRKARIRTLGKDSGAGRRRLQRSLLR 78
           +G  R+KQ   Q+ P +  +R+V   GD + E++   AR+  L    GA R RLQR L R
Sbjct: 26  SGRRRVKQCPHQVLPPVDPVRVVAGPGDRVHEQVTGMARVSPLPVHPGARRSRLQRRLRR 85

Query: 79  ALIEAIPKRVGGSSGE 95
            L EA+ KRVG  +G+
Sbjct: 86  PLEEAVVKRVGDDAGQ 101

BLAST of CcUC11G221590 vs. ExPASy TrEMBL
Match: A0A0P0WUF2 (Os06g0220100 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0220100 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.9e-04
Identity = 30/89 (33.71%), Postives = 50/89 (56.18%), Query Frame = 0

Query: 9  VVYALNESRTAGSGRIKQRRKQIFPAIPTIRIVTPTGDGIDEKLPRKARIRTLGKDSGAG 68
          VV  L+E    G   +++RR+++FPA+  +R+V   G  + ++    AR+R L   + A 
Sbjct: 9  VVDRLHERGAGGRVGVEERREEVFPAVRAVRVVAGAGGLVHQQRAGVARVRALAVHARAR 68

Query: 69 RRRLQRSLLRALIEAIPKRVGGSSGEKSG 98
          RR LQR     L+E + +RVG  +G  +G
Sbjct: 69 RRGLQRRAALPLVEPVAERVGHRAGHHAG 97

BLAST of CcUC11G221590 vs. ExPASy TrEMBL
Match: A0A371E4L3 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_60892 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.2e-04
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0

Query: 18 TAGSGRIKQRRKQIFPAIPTIRIVTPTGDGIDEKLPRKARIRTLGKDSGAGRRRLQRSLL 77
          T+GSG +K+  +QIFP I  + IV   G G+ ++ P  AR+  L   +GA     QR L 
Sbjct: 6  TSGSGWVKECWQQIFPVINAVSIVASAGCGVHQEFPGVARVSALAVQAGASGSGFQRRLF 65

Query: 78 RALIEAIPKRVGGSSGEKS 97
           +L  +IP+RVG    +++
Sbjct: 66 GSLEVSIPERVGNGPRQQT 84

BLAST of CcUC11G221590 vs. ExPASy TrEMBL
Match: C4J1K8 (Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 9.3e-04
Identity = 30/86 (34.88%), Postives = 48/86 (55.81%), Query Frame = 0

Query: 13  LNESRTAGSGRIKQRRKQIFPAIPTIRIVTPTGDGIDEKLPRKARIRTLGKDSGAGRRRL 72
           L++SRT    R++Q RKQ+ P I  I IV     G+  ++  +  +     D  AG   L
Sbjct: 33  LHQSRTRRGSRVEQSRKQVLPPIRAIGIVARPRRGVHRQVTCETGVGAAAVDPCAGSGGL 92

Query: 73  QRSLLRALIEAIPKRVGGSSGEKSGE 99
           QR +L AL+E + +RVG  +G+ +G+
Sbjct: 93  QRRVLVALVEPVAERVGHRAGDHAGD 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8818965.12.7e-0537.50hypothetical protein D1007_03168 [Hordeum vulgare][more]
RWW88377.16.0e-0540.51hypothetical protein BHE74_00002753 [Ensete ventricosum] >RZR80526.1 hypothetica... [more]
RWV81170.11.0e-0440.79hypothetical protein GW17_00057436 [Ensete ventricosum][more]
RRT59362.11.0e-0440.79hypothetical protein B296_00042322 [Ensete ventricosum][more]
KAB8101767.13.9e-0433.71hypothetical protein EE612_032745, partial [Oryza sativa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A444C5F24.9e-0540.79Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00057436 PE=4 SV=1[more]
A0A426Z5W24.9e-0540.79Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00042322 PE=4 SV=1[more]
A0A0P0WUF21.9e-0433.71Os06g0220100 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os06... [more]
A0A371E4L34.2e-0436.71Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_60892 P... [more]
C4J1K89.3e-0434.88Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC11G221590.1CcUC11G221590.1mRNA