CcUC11G219270 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G219270
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	RNA-binding KH domain-containing protein PEPPER
Location	CicolChr11: 22430173 .. 22438727 (-)
RNA-Seq Expression	CcUC11G219270
Synteny	CcUC11G219270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAACCCGCAGTTGCCTCTTTTCCCTTTCTCTTCCCTTCATTTTTCTTAAAACCTCTGTAAGCCTTAACCCTAACTTCTTCTTCATCTTTCTCGATGGCCACCAACACAACTACAGAGAATGGCTCCACTGATGCCAACGCCCTCAATTCCAACCCCCAAACTTCAACACTTTCCTCTCTAGCTCCTGCAGAACCAGACTCTACCGAAGCTGGTGGCGCTGATTCCGACATCGATCCTTCTAACCAAGACTACTTATCCGTTCCGGCTTCGGATTCTGCAGCTCATGAAGGCCCCAATCATACTGGCGCTTCCGATAAAAAGTGGCCCGGATGGCCTGGAGACTGCGTCTTCAGGCTTATTGTGCCGGTTGTTAAAGTCGGCAGCATTATTGGGCGTAAGGGCGATCTTATTAAGAAGATGTGTGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGAGTGTTTCTCAAACCTCAGCTCTTTCTTGTAGTTGTTACTCATGCCTACATAGGGGCAACGAGTTGAATCTCTTATCTTTATATTGGTTTATTTATTATGTTTGGTTCCAGTTAATGGGACTGTTTGGCTAGTTATTTGTTCAGCCCGACCACCTTTATGTGTTCCTCGATGGATAATTAGACTGGGTGTAATGATTTCTAGTCAAAAGATGTCTCCTTTTTCGATCCCTCGAGGGTTTCAGGGAAAAGGGAAAAAAAAATAGTATTCTCCCATCTTTGGCTGGTTCCATTAATTACATGCTAGTTTGTCATAACAAGTTATTTTCTACTTCTTTCACAGCAGCCGCTGAAGCGTGGTCTGATATTAGGTTAACTACGAGTATATATGGAACTTTTTGGGTACGAAAAGGAGCTTCTGTTAAACGTTGTTTGGGTTATTTAAAGTTGAGGCTTGATCTATGATGGAGGAGGTGCTTCTGAATTCTTCCTTTAGGGAGAAGGGACAATTGTTATGGCCTGCTAGTTTCTTTGCATTTAGCTTGAGAGGGATAATAGAATCTGTAGAAAGGTGGAGAGAGGTTTGTGAGATGGCTAGGTTTAATGCCTTCTTGTGCGTGCCTTTCACTAAGCCTTTTTGTTTTTTTGTTTTTTGTTTTTTGTTTTTTTTTAATAATTATGAGCTTGATCTTGTTTTGTTGGATTGGAGTCCTTTTCTGTGGTTAGGATCAAACTCCTTTTTTGTTGTTGTTTGTTTTTGTATGCAATTCTATATTTCATTTCTCCCCATAGAAGCGTGGTTTCTGACTAAAGGAAAATTGAAGCTTGATCGCGCTTTTTTGTTAATTTTATTTCGCAATATATGTATAGAAAAATTGAACCGTTGTTTCTTTGATGCTTCACTTTGATTTGCAAGAACACTTGGATGCACTTTCAGACAATTGTTCAAACTTGCTTGTTCAGTTTTTAACGTTCAGATTTTACTTCAGGTGCTGATTTCAGGAAAAGAAGAGCTTGAGGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTGTCAGGGTTATCTGAGAATGAAGATGAGGCTAAGGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATTTAATTGGAAAGCAGGGTTCATTAATCAAATCTATACAGGAGAGTACTGGAGCCTCTGTAAGAGTATTATCAGGAGGTATGCTTTCATTCTCTGTTATGCACTTGCCACTCTTTTATTGATTGGTTTTGGGCCTAGCTGTATTATTGTCGAAGATCATGAATTCTTCCAGATAGCTAAATTGTAGAGCCATTAAAAAGGTTGTTATTGAGAGAAAGACAAATAAGCACGCTGTCCAAAACTTCATTGCAAGAGATGGATCATGCTAAAGAGTAAAAATGCCCCTAGAGAACCAAGGGAATCAATAGAAGACCACCTTCATAATTGAGGTGCAAATGGGTCTGATAAAAACTGGGCAACCATACTAAGCTTTGGTTTTTGCAAAAGAACAATATCCCGAGCAGTATCAACTATAGTGTTTTGATAAGTTACACCTTAACCCTTTTTGTATATATATGCACCTAACTCTTTCCATTTAGTCCAATTTTGTATTAATCAGTTATTTGACCAGAGAGGCGATTCAGTTATAGGAAGTATTGTTTGTTTGTCTCCTTTAAGTTTGGGATCAAATGTTTGTAAGAAGTGGGAATTTAGGAAGCCTCTATTAGGAACCAAGGTATGATAGGAATGGTATTAGAGGGATATTAAGGGTATAATAATAAATAGTTAAATAGTTTGTTAGGGAAGGTTGGTTAAAATTACCGTGGGTAGGAAAGAAGGGGTAAGCAATATTTTGGAATATGACGTAAGGGCTTGAGAGTATCTCAAGATTGGGAGGGTCCAAGTACCTTGAACGCTTGGTTTATCTTGTATTTTCTTTATCATTTATCTTTCAATATATTCGGGTTCTATCAATTTGGTATCAGAGCGGTGAGACTTGAGTATGGTGGGGAAGATGGTAAGTAGAATGATCGTTGTGGAGGAGAAGTTACTGGAAATAGGGGAGAGGCAAGCCATGATGGAAGTGAAGATGGAGGAACAGTTCAATGAGGCCAAGACGGCAATAGATGAGCTCAGAGGAAGGATTGGCAAATGCTTTTGAAGAACACAGGCATGGAAGATGTGAAAGATTTGGCGGAAGCGGCAGCAAGCTTCGCAAAAGGACAACCATGATAGTAGTGTGTGCCAAGGGAGCAGATGGGTACACGAAAGTATAAACAAATAGGGAGACAAATGGTTGCCGGAGATCATCAACGGCGAAGAATGCACTAGTAGATGGGGAGGTAGGCTTGGGGAAGACGCTGCTGGGGAAGAAGGGGAGAGATTCCTTACCCACGTGAAGTGTGAGAATGTGGGGCCATGGTCATGGAAAAAATGCGACTTAACTTCGGGTGGAAGTTTTGGGCTAATTTTACATAAAAGACTGAAGGCCCATTTCTTTTTGGAGCTAAATAATGAAGCAGCAAGTTGTTGAGCCATGGCCTGGGCTGCCTCATTATGCTTGGTTCCCAACCACAATAGCCCACTGCCTAAGCTACTACAGTACAGTTGCTGATCTCTGTTTGCTATAAAATTAAAAAAAAAAAAAATCCTTCAATTTGTATCCACACCTTGAGGGCAAGGTGTGTTTTAGGGGCCGGTAAAGTTAGGAATGGTATTAGTTAGAGGGATATTAAGGGTATACTAGTAAATAGTTAAGTAGTTTGTTAGGGAAGGTTGGTTATAAATACAGTGGGTAGGAAAGATGGGGGTAAGCAATATTTTGGAATATGAAGTAGGGGCTTGAGAGTATCTCAAGATTGGAAGGGTCAAAGTACCTCGAACACTTGGTTTTTCGTGTATTTTCTTTATCGTTTATCTTTCAATATATCTGGGTTCTATCAATTGTTAGGTACTTAAGCACCTTGGAGAACCACACCCCAAAAGCTAGCTATTGAGGTGGGAGAGCGAAGCCACTTAAATACCACATTGGTCATCCCATTCTAACCAATGTGAGACAAAGGTAGCCTATACTACCTTGTTTCCTAACAATACCCCATTTCCGGAAAGCCAACGTCCGACGGCTACTCCAACGGTACTTAACTTGGCCACACCCAATCCGAACCCTCCACCGATTCCACTTCGGAATATCAAAAATCGACTCTGATACTGTTGTTAGGTACTTAAGCACCTTGGAGAACCACACCCCAAAAGCTAGCTATTGAGGTGGGAGAGCCAAGCCATTTAAGTACCACATTGGTCATGCCATTCTAACCAATGTAGGACAAAGGTAGTCCATACTACCTTGGTTCTTAACAGCCTCATTGCAAGATTGAAATCTCACAAGTTGTGCTGTGTTAGAGTTAGATTTTGATGGTTCAGTGTTTGGCCCCCTTCCATGTAAAGAGGCTCTTATTCTAGATAAATTAGATGGTCAGCTTCAGATTAAGTACTCTTCTCAATAACTAGTCTGTGAAGAAAATATTCACGAGAATCGCAAGAATCACTAGCATCTATGGGGGATTACATTTTTACCTTTTACCATCCCCCCACCTCTTCTTTAAAGATATTCCCCCATCTTATGATTGTCTGGTGTAGCTAACTTAATTGGAAGAACTTACCTTTCTTCTTTCCAGAAGGTGAAGGGCTCTTGAGGTCAAACTCCCTTTATTCAGTAGCTCGTTGAAAAGCCTTGCAGAAACGGCATCTCTTGTGCTATTTTGACATATTTGTCTCGAAGGATCGATTTGTGACTAAAGCCAATAAAAATTTGCCATTGGGTGGTCTCTCTCTCTCCCCCTCTCTAGAGGTGTACATGGGTTGGGTTGAGGATGTTTTTTGGACCAACCTAATAGGTTGGCAATCCAAAAGACCCAAATAAAGTCTCCAACCCTTAAAATTCGGGTTGGGTTGGGTTGTCAGGTTATAACTTATTTTTTTCCTTTTTAATTAAAAGTATGTAAGTTTATCTACAACACATGACTAATAACTAAAATATCACAACATTTTAAAAGAAAATATTAAAAATTCACAAATTAATCAATACAAAGTGATCAAACTTTAAACAAAGACAAACATATATATATATTATTAATATATACAGAATTTGGCCAACCCGCGACTCAACCTAACCCAACAAAAATAGAAAAAATTGAACCCAACCCAAGAACAAAAAGGTTGCGTAGCCGGGTTGTTTGGGTTGTCGGATCATTTGAACACCCCTTCTCTCTCCCCCCAAATAAACCACTAGGTAGGAGGGAGATTTGTTGAAGCCTATTATTCTCAATGAAAGGTTGTCTCATAAAGGAAATTTGATATTTTGTTTTTATTCAAAAAATAAAAGAAAATATGAACCCCTATTTCTGTCATCTCTTACAAAAGCTCTACTTTTTTTTTTCTTAAAATTTTAATTTCCCCATCGTTCATAAACTATACCTTTTCGTATGGAAAAAATGTTACTTGTGTTTTTTTATAGTGTACCCCACCAAAAAAAGGGTTCTCCCTTGCCCAAATGGCCATTACATATTTTTGTATGCTCGCTGTAGATTCTTTATTCGCTCTATGAAGGTTTGTATTTTCAATAAAAAACGGATATTATGTATCATGCGATTTGATAACACTAGCCTAGGCACGATATATGCCTCCAAACTTTGTCATCGGTGTTCACCTCAATTGTCTGAGAGCTAGGATTATACAGTCTAAGAAACTGAAAACAAAACTGTAAAACACAATCATCCTTTATCAATTTTGTAATCACTCTTTACACTCTATTTTCTATGGCTTTAGCCCTTTCCTCGAAGGTGGTGTCCTTTTGTGGGCATGGTTTTTGTATGCCCTTGTAATTTTTTATTTTTTTCTCAATGAAAATGGTTGTTTTTACATTAAAAAACAAATAACACAAGCGAACAAATAGAAAACAGCTCTATCAGCTACAATAGTTCAAAGGTATGGCGATAAGAGATGTACTTGCCTCAATCCCTTGTAAGCAGGCATGCATCTTTGTTCTGGTGAGTTTTATCACCATTACTTTATCAACGTTGCTTCCAAAACAAAATTTGATTCTAGAAATATGATTGTGTGGTTGAATTACAACCAAGGTTCATAAAATTCTTGGTCTTTTTTCCTACTTTGTGTTAGACATAGAGGTTAGAGGGAGATGGTCAAGGAGTTCCTTCTGCATCCACCTTTTTGAGGGACGGGGAAGTATCTATGAAATGGGATTTGTGCTGTGTCGTGGATTTGTGGGCTCAGAGGAATAATAGGATCTTTAGACAGATTGAGAGGGACCTAGTGATGTTTGGTTCTCTGTCAGATTCTTTGTTTAATTGTTTCCCTTTGGGGATAGAGACTTTTTGTTATTATCTTTTAGGTTTTGTTCTACTTCATTGGGGCCCTTCCTTTTGTGGGCTGGATGTTTTCTTGAAAATTCAGTTTATTTTTTTATTTTTATTTTTATTTTTTTTATTTTTCTATAAAGGGAACAACACTTTTCATCGATAAAATGAAAAGAGACTAATGCTCAAAATACAAGGATACAAACCAAAAGGCAAAAAAATTGATAAAGTACAAACCCGAAATTCAGTTTTTTATCAGAAAAAAAATGGTCCGAGACCTTTCATTCAACAGGACCTCATTGCTAACTTATTATTATTGATGAGTTAGATGCAAAAATGATAATGAGAATGTAAAGCATCTCTTCTTAATTGAAGGATGTAGTATAGTTTCATTCTTGAGTTTTGCGTTTTATCTGATCATCTTAGAGAAGCATGCTTGTTCTAATTCACTAACCTCTTTCTCGTGCTAATACATGATAAAAATGGCGTAAAGGCTAAAGCTAAAAGTGCATGGCAATAGCTGGATAATATAAGTTTTATCTTTTACCTCAACTATATTGATGACTATTAACTTCAAGCCTTGAGTTCAGCCAGCAGGTCCAAATAACTAATAATGTCCTGAGATAATAATACTTTTCCTCCTATAGTCAATGGTATATGAGTACTCTCTGAATGTTCCCTTACTCATCTAGATTTGATGTGCAGATGAGATGCCATTCTATGCCGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCACAGTGTTCTTCCTCTGTTTGAAAAGAGTGTAAGTTTTTTTCTTATTAGTCTATGACCAACCTTTTCAAGGACTCCTAGTGAATTTTTATTTTTATTTTCTTTATTTTTTATTTTTTACTTTTTCAGTTTAATACACCTACCTCACAAGATCGGCAAACAGAGACCTGGGCTGACAAGTCCTCACTTCTCACTGCATCTCAAAGTGTAATCTCCGCCGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGACCGGGAAACTCATCTTGATTCTCATATTCCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTACTTCCTACAATTCGATCATCAGGTGTTGGTCGCTCTGGGGGACCTATTGTAACTCAGGTTGGTATATGAAGCTCATTTATCTAGTTATTGGTAGAAGGAAATGGTCTATGTTGACTTAGTGAGGTATCAAACAATCCCACCTACTGGCCTCTATAATCATTAACATCAATTCATCATTCCATGCCTATTACTACAGTTAGGTGATTAGTTTTTTGTCGTCAGGTCAAGGCAAGCTAGAAGCTTGTCTGCTTTACATGTCCTTCGTGTCTTGGAAACACTAGGTCCAAAATGTTTGGCATATTACATACAAGTATGATTTAGATTTTAACATAATGCTGAATGGAGGCAGTGAGAACAGAGTAGTTTTAGAGTGTCTTTGTAGTTTGTTATTTCTGATCTAGTTACCTCTCTGGCTCCTGTTAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGATATCATTGGGGTAGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGTAAATAACTTATAACTTCGTGATTGAGAGCTTGTTTGTGGTCCGTAGAGTTGTAATTTTGTGATTCTATCATTGGCTAAACCTTTAGCCTCGTTACACTAGCTAGTTTTAGGTATCATTGTGGATCACTAGATTCAAGGAAAAAGATCTTTTTTGATCCTCCAACCAAAAAAGAAAAAAAAAAAAAAAGAAAGGAAAAAAGCATGCACTATATTATGTTATAAACCATCATGAGTTGACTTAGTGGTAAAAAAGAATAAATGGCTAAGAGGTCATGGGTTGTTCAATCCATAGTGACCACCTACCTAGGAATTAATTTTCTACGAGTTTCCTTGACACTCAAATGTTGTAGGGTCAAACGGGTTGTCCCGTGAGACTAGTTGAGGTGCGCGTAAGTTAGTCTGGACACTCACATATATATGTGTATATATGTATCACGATATTGTATATAAATATGTCTCTGTTGATGAACAAAAATTAAGGTAATGTTTAGATATTAATGATTATTTATGCCATGTAGGAAGCAGTAAGTGCCCCGAAGGAAGCAGTTACAAGCAGCAGCTATGGCAGGCTAGACACAGCAGGGTTGAGGTCGTCGTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGAATTTGATTGATCTGCAGAGATTCATATCCACTCGGATTTGATCCACTTTGGATTCATTAATTCTTGCTAAGAGAATGAATGAATTATGTTGGAATCTAGTTGTTGTAAAGTCAGCCTAAAGTAGTTAAAAACGCTTTTTTTACCCTCTCTGGCATATTCAAACTCATTCAGCTGGGT

mRNA sequence

AAAAAAAAAAAAACCCGCAGTTGCCTCTTTTCCCTTTCTCTTCCCTTCATTTTTCTTAAAACCTCTGTAAGCCTTAACCCTAACTTCTTCTTCATCTTTCTCGATGGCCACCAACACAACTACAGAGAATGGCTCCACTGATGCCAACGCCCTCAATTCCAACCCCCAAACTTCAACACTTTCCTCTCTAGCTCCTGCAGAACCAGACTCTACCGAAGCTGGTGGCGCTGATTCCGACATCGATCCTTCTAACCAAGACTACTTATCCGTTCCGGCTTCGGATTCTGCAGCTCATGAAGGCCCCAATCATACTGGCGCTTCCGATAAAAAGTGGCCCGGATGGCCTGGAGACTGCGTCTTCAGGCTTATTGTGCCGGTTGTTAAAGTCGGCAGCATTATTGGGCGTAAGGGCGATCTTATTAAGAAGATGTGTGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGCTGATTTCAGGAAAAGAAGAGCTTGAGGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTGTCAGGGTTATCTGAGAATGAAGATGAGGCTAAGGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATTTAATTGGAAAGCAGGGTTCATTAATCAAATCTATACAGGAGAGTACTGGAGCCTCTGTAAGAGTATTATCAGGAGATGAGATGCCATTCTATGCCGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCACAGTGTTCTTCCTCTGTTTGAAAAGAGTTTTAATACACCTACCTCACAAGATCGGCAAACAGAGACCTGGGCTGACAAGTCCTCACTTCTCACTGCATCTCAAAGTGTAATCTCCGCCGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGACCGGGAAACTCATCTTGATTCTCATATTCCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTACTTCCTACAATTCGATCATCAGGTGTTGGTCGCTCTGGGGGACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGATATCATTGGGGTAGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGAAGCAGTAAGTGCCCCGAAGGAAGCAGTTACAAGCAGCAGCTATGGCAGGCTAGACACAGCAGGGTTGAGGTCGTCGTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGAATTTGATTGATCTGCAGAGATTCATATCCACTCGGATTTGATCCACTTTGGATTCATTAATTCTTGCTAAGAGAATGAATGAATTATGTTGGAATCTAGTTGTTGTAAAGTCAGCCTAAAGTAGTTAAAAACGCTTTTTTTACCCTCTCTGGCATATTCAAACTCATTCAGCTGGGT

Coding sequence (CDS)

ATGGCCACCAACACAACTACAGAGAATGGCTCCACTGATGCCAACGCCCTCAATTCCAACCCCCAAACTTCAACACTTTCCTCTCTAGCTCCTGCAGAACCAGACTCTACCGAAGCTGGTGGCGCTGATTCCGACATCGATCCTTCTAACCAAGACTACTTATCCGTTCCGGCTTCGGATTCTGCAGCTCATGAAGGCCCCAATCATACTGGCGCTTCCGATAAAAAGTGGCCCGGATGGCCTGGAGACTGCGTCTTCAGGCTTATTGTGCCGGTTGTTAAAGTCGGCAGCATTATTGGGCGTAAGGGCGATCTTATTAAGAAGATGTGTGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGCTGATTTCAGGAAAAGAAGAGCTTGAGGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTGTCAGGGTTATCTGAGAATGAAGATGAGGCTAAGGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATTTAATTGGAAAGCAGGGTTCATTAATCAAATCTATACAGGAGAGTACTGGAGCCTCTGTAAGAGTATTATCAGGAGATGAGATGCCATTCTATGCCGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCACAGTGTTCTTCCTCTGTTTGAAAAGAGTTTTAATACACCTACCTCACAAGATCGGCAAACAGAGACCTGGGCTGACAAGTCCTCACTTCTCACTGCATCTCAAAGTGTAATCTCCGCCGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGACCGGGAAACTCATCTTGATTCTCATATTCCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTACTTCCTACAATTCGATCATCAGGTGTTGGTCGCTCTGGGGGACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGATATCATTGGGGTAGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGAAGCAGTAAGTGCCCCGAAGGAAGCAGTTACAAGCAGCAGCTATGGCAGGCTAGACACAGCAGGGTTGAGGTCGTCGTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGA

Protein sequence

MATNTTTENGSTDANALNSNPQTSTLSSLAPAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

Homology

[Close]

BLAST of CcUC11G219270 vs. NCBI nr
Match: XP_038890982.1 (RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida])

HSP 1 Score: 863.2 bits (2229), Expect = 1.0e-246
Identity = 457/473 (96.62%), Postives = 464/473 (98.10%), Query Frame = 0


Query: 1   MATNTTTENGSTDANALNSNPQTSTLSSLAPAEPDSTEAGGADSDIDPSNQDYLSVPASD 60
           MAT TTTENGSTDANALNSNPQ+STLSSLA AEPDSTEAGG +SDIDPSN+DYLSVPASD
Sbjct: 1   MATTTTTENGSTDANALNSNPQSSTLSSLAAAEPDSTEAGGTESDIDPSNEDYLSVPASD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAA+EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAYEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEL+APLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTP SQDRQ +TWADKSSLLTASQS+IS EYPPSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQMDTWADKSSLLTASQSIISTEYPPSTKRES 300

Query: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAV 420
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKE V
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLD  GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
Sbjct: 421 TSSSYGRLDATGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 473

[Close]

BLAST of CcUC11G219270 vs. NCBI nr
Match: TYK03085.1 (RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa])

HSP 1 Score: 828.9 bits (2140), Expect = 2.1e-236
Identity = 445/473 (94.08%), Postives = 454/473 (95.98%), Query Frame = 0


Query: 1   MATNTTTENGSTDANALNSNPQTSTLSSLAPAEPDSTEAGGADSDIDPSNQDYLSVPASD 60
           MATNTTT+NGSTDA A   NPQ+STL SLA AE DSTE G  DSDIDPSNQDY S+P SD
Sbjct: 1   MATNTTTDNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAAHE  +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEYPPSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRES 300

Query: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRETHLDSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAV 420
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKE V
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 TSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of CcUC11G219270 vs. NCBI nr
Match: XP_004149510.2 (RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus] >KGN61176.1 hypothetical protein Csa_021288 [Cucumis sativus])

HSP 1 Score: 825.5 bits (2131), Expect = 2.4e-235
Identity = 444/473 (93.87%), Postives = 450/473 (95.14%), Query Frame = 0


Query: 1   MATNTTTENGSTDANALNSNPQTSTLSSLAPAEPDSTEAGGADSDIDPSNQDYLSVPASD 60
           MATNTTTENGSTDA     NP +STL SLA AEPDSTEAG  DSD DPSNQDY SVP SD
Sbjct: 1   MATNTTTENGSTDA---IPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAAHE  NHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEELE+PLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEY PSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRES 300

Query: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRE H DSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAV 420
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKE V
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLDT GLRSSYSQLAASGSS+TSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 TSSSYGRLDTTGLRSSYSQLAASGSSFTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of CcUC11G219270 vs. NCBI nr
Match: XP_016901887.1 (PREDICTED: RNA-binding KH domain-containing protein PEPPER [Cucumis melo])

HSP 1 Score: 808.9 bits (2088), Expect = 2.3e-230
Identity = 438/477 (91.82%), Postives = 449/477 (94.13%), Query Frame = 0


Query: 1   MATNTTTENGSTDANALNSNPQTSTLSSLAPAEPDSTEAGGADSDIDPSNQDYLSVPASD 60
           MATNTTT+NGSTDA A   NPQ+STL SLA AE DSTE G  DSDIDPSNQDY S+P SD
Sbjct: 1   MATNTTTDNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAAHE  +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEYPPSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRES 300

Query: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRS----GGPIVTQVTQTMQIPLSY 360
           LFLDRETHLDSHI SSGISLYGQDRVLPTIRSSGVGRS       ++  VTQTMQIPLSY
Sbjct: 301 LFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSXXXXXXXLIYSVTQTMQIPLSY 360

Query: 361 AEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAP 420
           AEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+AP
Sbjct: 361 AEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAP 420

Query: 421 KEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           KE VTSSSYGRLDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 KEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 474

[Close]

BLAST of CcUC11G219270 vs. NCBI nr
Match: XP_022996845.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita maxima])

HSP 1 Score: 807.4 bits (2084), Expect = 6.7e-230
Identity = 432/474 (91.14%), Postives = 448/474 (94.51%), Query Frame = 0


Query: 1   MATNTTTENGSTDANALNSNPQTSTLSSLAPAEPDSTEAGGADSDIDPSNQDYLSVPASD 60
           MATNT T+NGSTDANALN NP++S L+S+A AEPDS EAGGA+SD+DPSNQDYLS PASD
Sbjct: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60

Query: 61  SAAH-EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
           SA H E PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV
Sbjct: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+ EAPLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEG 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALE 
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240

Query: 241 VVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRE 300
           VVGHLRKFLVD SVLPLFEKSFNTP SQDRQ + WADKSSLLTASQSVISAEYP STKRE
Sbjct: 241 VVGHLRKFLVDRSVLPLFEKSFNTPPSQDRQMDAWADKSSLLTASQSVISAEYPSSTKRE 300

Query: 301 SLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360
           SL+LDRE +LDS+IPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED
Sbjct: 301 SLYLDREAYLDSYIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEA 420
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKE 
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEP 420

Query: 421 VTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           VTSSSYGRL+ +G+RSSYSQL ASGSSYTSSSLSSQ YGGYGSSGLGGYSTFRL
Sbjct: 421 VTSSSYGRLEASGMRSSYSQLDASGSSYTSSSLSSQLYGGYGSSGLGGYSTFRL 474

[Close]

BLAST of CcUC11G219270 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.7e-122
Identity = 256/456 (56.14%), Postives = 326/456 (71.49%), Query Frame = 0


Query: 54  LSVPASDSAAHEG-PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 113
           L+ P S +AA    P+   +++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEE
Sbjct: 43  LNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEE 102

Query: 114 TRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDE----AK 173
           TRARI+VLDG V TPDR+VLISGKEE EA +SPAMDAV+RVF+RVSGL +N+D+    A 
Sbjct: 103 TRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAG 162

Query: 174 ASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQG 233
           + F S+RLLVASTQAINLIGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQG
Sbjct: 163 SVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQG 222

Query: 234 ESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWAD-KSSLLTASQSV 293
           E+LK+LKALE +VGHLR+FLVDH+V+PLFEK +    SQ RQ E  A+ KSSL T S ++
Sbjct: 223 EALKILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL 282

Query: 294 ISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVT 353
           +  ++    +RE LFL+R++ +DS +  SG+S+Y QD VL    S G+ R     VTQV+
Sbjct: 283 MEPDFSLLARREPLFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVS 342

Query: 354 QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ 413
           QTMQIP SYAEDIIGV G NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+Q
Sbjct: 343 QTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQ 402

Query: 414 LIQEAVSAPKEAVT-SSSYGRLDTAGL---------------------------RSSYSQ 473
           LIQE +   KE V+ S  Y R+D+  +                            ++YSQ
Sbjct: 403 LIQEFIINHKEPVSVSGGYARIDSGYVPAYPPQLSNRQEPLPSTYMGTEPVQYRPTAYSQ 462

[Close]

BLAST of CcUC11G219270 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 6.4e-74
Identity = 178/411 (43.31%), Postives = 242/411 (58.88%), Query Frame = 0


Query: 71  GASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRV 130
           G  +K+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R 
Sbjct: 174 GGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233

Query: 131 VLISGKEELEAPLSPAMDAVIRVFKR-VSGLSENEDEA-KASFCSIRLLVASTQAINLIG 190
           V++SGKEE E+ L P+MD ++RV  R V GL     +A   S  S RLLV ++QA +LIG
Sbjct: 234 VMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIG 293

Query: 191 KQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFL 250
           KQG  +K+IQE++   VRVL  +++P +A  D+R+VE+ GE   V +ALE +  HLRKFL
Sbjct: 294 KQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL 353

Query: 251 VDHSVLPLFEKSFNTPTSQ-DRQTETWADKSSLLTASQSVISAEY--------PPSTKRE 310
           VD S++P FE     PT Q D               + SV    Y         P  + +
Sbjct: 354 VDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHD 413

Query: 311 SLFLDRETHLD--SHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYA 370
           S +   E         P  GIS YG++  +    +  V  +   +  QVTQ MQIPLSYA
Sbjct: 414 SYYPPPEMRQPPMEKQPHQGISAYGREPPM----NVHVSSAPPMVAQQVTQQMQIPLSYA 473

Query: 371 EDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPK 430
           + +IG  G+NI++ RR SGA +TIQE+RG+P E+TVE+ GT SQVQ A QLIQ  ++   
Sbjct: 474 DAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMA--- 533

Query: 431 EAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY 469
           EA   +       A  +  Y+  A  GS Y ++  +    GGY +    GY
Sbjct: 534 EAGAPAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNPP--GGYATDYSSGY 575

[Close]

BLAST of CcUC11G219270 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.6e-19
Identity = 97/390 (24.87%), Postives = 172/390 (44.10%), Query Frame = 0


Query: 83  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAP 142
           D VF+++      G +IG  G +++ +  ET A I V +      +R++ ++  E  E  
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510

Query: 143 LSPAMDAVIRVFKRVSGLSENE--DEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQES 202
            SPA  A++ +F R+  L+ N+  D    S  + RL+V ++Q   ++GK G ++  ++++
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570

Query: 203 TGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKS 262
           TGA++++L  ++ P     ++++V++ GE   V +A+  +   LR  +  +S+     KS
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKS 630

Query: 263 FNTPTSQ---DRQTET---------------------WADKSSLLTASQSVI----SAEY 322
            +  T++   DRQ++                         + S L+ S S +    S   
Sbjct: 631 SSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGT 690

Query: 323 PPSTKRESLFLDR----------------ETHLDS--HI------------PSSGISLYG 382
            P  + E  F DR                  H D+  H+            P++   L  
Sbjct: 691 DPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGLSD 750

Query: 383 QDRVLPTIRSSGVGRSG--GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILT 410
               L + R+  V  SG    IVT  T  +++P +    + G  G N+  +R+ SGA + 
Sbjct: 751 ASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVI 810

[Close]

BLAST of CcUC11G219270 vs. ExPASy Swiss-Prot
Match: P57721 (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 7.6e-19
Identity = 99/346 (28.61%), Postives = 159/346 (45.95%), Query Frame = 0


Query: 87  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPA 146
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G           
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG----------P 108

Query: 147 MDAVIRVFKRVSGLSE--------NEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQ 206
            DA+ + F  ++   E        N         ++RL+V ++Q  +LIGK GS IK I+
Sbjct: 109 TDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIR 168

Query: 207 ESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFE 266
           ESTGA V+V +GD +P    + ER V + G    +++ ++ +   + +     + +P   
Sbjct: 169 ESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRP 228

Query: 267 KSFNTP---------TSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHL 326
           K  +TP         T Q +      D+ + L    ++    +PP  +    F   +  L
Sbjct: 229 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKL-HQLAMQQTPFPPLGQTNPAFPGEK--L 288

Query: 327 DSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIA 386
             H      +L GQ        SSG+  S        T  + IP      IIG  GT I 
Sbjct: 289 PLHSSEEAQNLMGQ--------SSGLDAS----PPASTHELTIPNDLIGCIIGRQGTKIN 348

Query: 387 FIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA 416
            IR+ SGA + I  +     E  + I GT + + +AQ LI   +++
Sbjct: 349 EIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 363

[Close]

BLAST of CcUC11G219270 vs. ExPASy Swiss-Prot
Match: P57722 (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3)

HSP 1 Score: 96.7 bits (239), Expect = 7.6e-19
Identity = 99/346 (28.61%), Postives = 159/346 (45.95%), Query Frame = 0


Query: 87  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPA 146
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G           
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG----------P 108

Query: 147 MDAVIRVFKRVSGLSE--------NEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQ 206
            DA+ + F  ++   E        N         ++RL+V ++Q  +LIGK GS IK I+
Sbjct: 109 TDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIR 168

Query: 207 ESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFE 266
           ESTGA V+V +GD +P    + ER V + G    +++ ++ +   + +     + +P   
Sbjct: 169 ESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRP 228

Query: 267 KSFNTP---------TSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHL 326
           K  +TP         T Q +      D+ + L    ++    +PP  +    F   +  L
Sbjct: 229 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKL-HQLAMQQTPFPPLGQTNPAFPGEK--L 288

Query: 327 DSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIA 386
             H      +L GQ        SSG+  S        T  + IP      IIG  GT I 
Sbjct: 289 PLHSSEEAQNLMGQ--------SSGLDAS----PPASTHELTIPNDLIGCIIGRQGTKIN 348

Query: 387 FIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA 416
            IR+ SGA + I  +     E  + I GT + + +AQ LI   +++
Sbjct: 349 EIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 363

[Close]

BLAST of CcUC11G219270 vs. ExPASy TrEMBL
Match: A0A5D3BVI2 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001920 PE=4 SV=1)

HSP 1 Score: 828.9 bits (2140), Expect = 1.0e-236
Identity = 445/473 (94.08%), Postives = 454/473 (95.98%), Query Frame = 0


Query: 1   MATNTTTENGSTDANALNSNPQTSTLSSLAPAEPDSTEAGGADSDIDPSNQDYLSVPASD 60
           MATNTTT+NGSTDA A   NPQ+STL SLA AE DSTE G  DSDIDPSNQDY S+P SD
Sbjct: 1   MATNTTTDNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAAHE  +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEYPPSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRES 300

Query: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRETHLDSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAV 420
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKE V
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 TSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of CcUC11G219270 vs. ExPASy TrEMBL
Match: A0A0A0LMH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1)

HSP 1 Score: 825.5 bits (2131), Expect = 1.2e-235
Identity = 444/473 (93.87%), Postives = 450/473 (95.14%), Query Frame = 0


Query: 1   MATNTTTENGSTDANALNSNPQTSTLSSLAPAEPDSTEAGGADSDIDPSNQDYLSVPASD 60
           MATNTTTENGSTDA     NP +STL SLA AEPDSTEAG  DSD DPSNQDY SVP SD
Sbjct: 1   MATNTTTENGSTDA---IPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAAHE  NHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEELE+PLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEY PSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRES 300

Query: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRE H DSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAV 420
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKE V
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPV 420

Query: 421 TSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           TSSSYGRLDT GLRSSYSQLAASGSS+TSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 TSSSYGRLDTTGLRSSYSQLAASGSSFTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of CcUC11G219270 vs. ExPASy TrEMBL
Match: A0A1S4E0X0 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo OX=3656 GN=LOC103492560 PE=4 SV=1)

HSP 1 Score: 808.9 bits (2088), Expect = 1.1e-230
Identity = 438/477 (91.82%), Postives = 449/477 (94.13%), Query Frame = 0


Query: 1   MATNTTTENGSTDANALNSNPQTSTLSSLAPAEPDSTEAGGADSDIDPSNQDYLSVPASD 60
           MATNTTT+NGSTDA A   NPQ+STL SLA AE DSTE G  DSDIDPSNQDY S+P SD
Sbjct: 1   MATNTTTDNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSD 60

Query: 61  SAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAAHE  +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEYPPSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRES 300

Query: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRS----GGPIVTQVTQTMQIPLSY 360
           LFLDRETHLDSHI SSGISLYGQDRVLPTIRSSGVGRS       ++  VTQTMQIPLSY
Sbjct: 301 LFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSXXXXXXXLIYSVTQTMQIPLSY 360

Query: 361 AEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAP 420
           AEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+AP
Sbjct: 361 AEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAP 420

Query: 421 KEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           KE VTSSSYGRLDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 KEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 474

[Close]

BLAST of CcUC11G219270 vs. ExPASy TrEMBL
Match: A0A6J1K7W7 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111491969 PE=4 SV=1)

HSP 1 Score: 807.4 bits (2084), Expect = 3.2e-230
Identity = 432/474 (91.14%), Postives = 448/474 (94.51%), Query Frame = 0


Query: 1   MATNTTTENGSTDANALNSNPQTSTLSSLAPAEPDSTEAGGADSDIDPSNQDYLSVPASD 60
           MATNT T+NGSTDANALN NP++S L+S+A AEPDS EAGGA+SD+DPSNQDYLS PASD
Sbjct: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60

Query: 61  SAAH-EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
           SA H E PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV
Sbjct: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+ EAPLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEG 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALE 
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240

Query: 241 VVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRE 300
           VVGHLRKFLVD SVLPLFEKSFNTP SQDRQ + WADKSSLLTASQSVISAEYP STKRE
Sbjct: 241 VVGHLRKFLVDRSVLPLFEKSFNTPPSQDRQMDAWADKSSLLTASQSVISAEYPSSTKRE 300

Query: 301 SLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360
           SL+LDRE +LDS+IPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED
Sbjct: 301 SLYLDREAYLDSYIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEA 420
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKE 
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEP 420

Query: 421 VTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           VTSSSYGRL+ +G+RSSYSQL ASGSSYTSSSLSSQ YGGYGSSGLGGYSTFRL
Sbjct: 421 VTSSSYGRLEASGMRSSYSQLDASGSSYTSSSLSSQLYGGYGSSGLGGYSTFRL 474

[Close]

BLAST of CcUC11G219270 vs. ExPASy TrEMBL
Match: A0A6J1EV22 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=3662 GN=LOC111436202 PE=4 SV=1)

HSP 1 Score: 804.7 bits (2077), Expect = 2.1e-229
Identity = 430/474 (90.72%), Postives = 448/474 (94.51%), Query Frame = 0


Query: 1   MATNTTTENGSTDANALNSNPQTSTLSSLAPAEPDSTEAGGADSDIDPSNQDYLSVPASD 60
           MATNT T+NGSTDANALN NP++S L+S+A AEPDS EAGGA+SD+DPSNQDYLS PASD
Sbjct: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60

Query: 61  SAAH-EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
           SA H E PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV
Sbjct: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+ EAPLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEG 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALE 
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240

Query: 241 VVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRE 300
           VVGHLRKFLVD SVLPLFEKSFN P SQDRQ + WADKSSLLT+SQSVISAEYP STKRE
Sbjct: 241 VVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSVISAEYPSSTKRE 300

Query: 301 SLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360
           SL+LDRE +LDS+IPSSGISLYGQ+RVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED
Sbjct: 301 SLYLDREAYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEA 420
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKE 
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEP 420

Query: 421 VTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 474
           VTSSSYGRLDT+G+RSSYSQL A+GSSYTSSSLSSQ YGGYGSSGLGGYSTFRL
Sbjct: 421 VTSSSYGRLDTSGMRSSYSQLDAAGSSYTSSSLSSQLYGGYGSSGLGGYSTFRL 474

[Close]

BLAST of CcUC11G219270 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 441.0 bits (1133), Expect = 1.2e-123
Identity = 256/456 (56.14%), Postives = 326/456 (71.49%), Query Frame = 0


Query: 54  LSVPASDSAAHEG-PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 113
           L+ P S +AA    P+   +++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEE
Sbjct: 43  LNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEE 102

Query: 114 TRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDE----AK 173
           TRARI+VLDG V TPDR+VLISGKEE EA +SPAMDAV+RVF+RVSGL +N+D+    A 
Sbjct: 103 TRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAG 162

Query: 174 ASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQG 233
           + F S+RLLVASTQAINLIGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQG
Sbjct: 163 SVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQG 222

Query: 234 ESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWAD-KSSLLTASQSV 293
           E+LK+LKALE +VGHLR+FLVDH+V+PLFEK +    SQ RQ E  A+ KSSL T S ++
Sbjct: 223 EALKILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL 282

Query: 294 ISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVT 353
           +  ++    +RE LFL+R++ +DS +  SG+S+Y QD VL    S G+ R     VTQV+
Sbjct: 283 MEPDFSLLARREPLFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVS 342

Query: 354 QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ 413
           QTMQIP SYAEDIIGV G NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+Q
Sbjct: 343 QTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQ 402

Query: 414 LIQEAVSAPKEAVT-SSSYGRLDTAGL---------------------------RSSYSQ 473
           LIQE +   KE V+ S  Y R+D+  +                            ++YSQ
Sbjct: 403 LIQEFIINHKEPVSVSGGYARIDSGYVPAYPPQLSNRQEPLPSTYMGTEPVQYRPTAYSQ 462

[Close]

BLAST of CcUC11G219270 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 279.6 bits (714), Expect = 4.5e-75
Identity = 178/411 (43.31%), Postives = 242/411 (58.88%), Query Frame = 0


Query: 71  GASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRV 130
           G  +K+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R 
Sbjct: 174 GGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233

Query: 131 VLISGKEELEAPLSPAMDAVIRVFKR-VSGLSENEDEA-KASFCSIRLLVASTQAINLIG 190
           V++SGKEE E+ L P+MD ++RV  R V GL     +A   S  S RLLV ++QA +LIG
Sbjct: 234 VMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIG 293

Query: 191 KQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFL 250
           KQG  +K+IQE++   VRVL  +++P +A  D+R+VE+ GE   V +ALE +  HLRKFL
Sbjct: 294 KQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL 353

Query: 251 VDHSVLPLFEKSFNTPTSQ-DRQTETWADKSSLLTASQSVISAEY--------PPSTKRE 310
           VD S++P FE     PT Q D               + SV    Y         P  + +
Sbjct: 354 VDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHD 413

Query: 311 SLFLDRETHLD--SHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYA 370
           S +   E         P  GIS YG++  +    +  V  +   +  QVTQ MQIPLSYA
Sbjct: 414 SYYPPPEMRQPPMEKQPHQGISAYGREPPM----NVHVSSAPPMVAQQVTQQMQIPLSYA 473

Query: 371 EDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPK 430
           + +IG  G+NI++ RR SGA +TIQE+RG+P E+TVE+ GT SQVQ A QLIQ  ++   
Sbjct: 474 DAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMA--- 533

Query: 431 EAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY 469
           EA   +       A  +  Y+  A  GS Y ++  +    GGY +    GY
Sbjct: 534 EAGAPAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNPP--GGYATDYSSGY 575

[Close]

BLAST of CcUC11G219270 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 110.9 bits (276), Expect = 2.8e-24
Identity = 94/343 (27.41%), Postives = 153/343 (44.61%), Query Frame = 0


Query: 83  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAP 142
           +  FRL+ P  KVGS+IG+ G +++ +  E+ A I+V D    + +R+++IS +E LE  
Sbjct: 275 EVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERR 334

Query: 143 LSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTG 202
            S A D V+RV  R+  +      A  +    RLLV S     L+GK G LI  ++ +TG
Sbjct: 335 HSLAQDGVMRVHNRIVEIGFEPSAAVVA----RLLVHSPYIGRLLGKGGHLISEMRRATG 394

Query: 203 ASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSV--------L 262
           AS+RV + D+   Y    + +V++ G    V  AL  ++  LR+ +    +         
Sbjct: 395 ASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMGGPP 454

Query: 263 PLFEKSFNTPTSQ--DRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSH 322
           P F   +  P      RQ     D+               P   +      DR     S 
Sbjct: 455 PPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSW 514

Query: 323 IPSSGISLYGQDRVLP------TIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 382
            P  GI  +    V P       +R+  +G S  P++T     + IP +Y   + G   +
Sbjct: 515 TPQPGIDGHPGGMVPPDVNHGFALRNEPIG-SENPVMTSANVEIVIPQAYLGHVYGENCS 574

Query: 383 NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLI 410
           N+ +I++ SGA + + + +    E  V + GTS Q   AQ L+
Sbjct: 575 NLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLL 612

[Close]

BLAST of CcUC11G219270 vs. TAIR 10
Match: AT5G64390.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 96.7 bits (239), Expect = 5.4e-20
Identity = 97/390 (24.87%), Postives = 172/390 (44.10%), Query Frame = 0


Query: 83  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAP 142
           D VF+++      G +IG  G +++ +  ET A I V +      +R++ ++  E  E  
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510

Query: 143 LSPAMDAVIRVFKRVSGLSENE--DEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQES 202
            SPA  A++ +F R+  L+ N+  D    S  + RL+V ++Q   ++GK G ++  ++++
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570

Query: 203 TGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKS 262
           TGA++++L  ++ P     ++++V++ GE   V +A+  +   LR  +  +S+     KS
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKS 630

Query: 263 FNTPTSQ---DRQTET---------------------WADKSSLLTASQSVI----SAEY 322
            +  T++   DRQ++                         + S L+ S S +    S   
Sbjct: 631 SSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGT 690

Query: 323 PPSTKRESLFLDR----------------ETHLDS--HI------------PSSGISLYG 382
            P  + E  F DR                  H D+  H+            P++   L  
Sbjct: 691 DPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGLSD 750

Query: 383 QDRVLPTIRSSGVGRSG--GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILT 410
               L + R+  V  SG    IVT  T  +++P +    + G  G N+  +R+ SGA + 
Sbjct: 751 ASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVI 810

[Close]

BLAST of CcUC11G219270 vs. TAIR 10
Match: AT5G46190.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 95.9 bits (237), Expect = 9.3e-20
Identity = 97/332 (29.22%), Postives = 156/332 (46.99%), Query Frame = 0


Query: 87  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVG-TPDRVVLISGKEELEAPLSP 146
           ++I    K+G +IG+ G  IK + + + + I V D       D V+ ++  E  +   S 
Sbjct: 320 KVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSM 379

Query: 147 AMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 206
           A++AV+ + ++++   E+ED+ K     ++LLV+S     +IGK GS+I  I++ T A +
Sbjct: 380 AVEAVLLLQEKIN--DEDEDKVK-----MQLLVSSKVIGCIIGKSGSIISEIRKRTKADI 439

Query: 207 RVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPT 266
            +  G+  P  A  ++ +VE+ GE   V  AL  +V  LR    D  +      S N P 
Sbjct: 440 HISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLR----DDVLRDRETGSRNQPP 499

Query: 267 SQDRQTETWADKSSL--LTASQSVISAEYPPSTKRESLFLDRETHLD-SHIPSS-GISLY 326
           ++      ++  SS   L   QS +S+   P           ET    S +PSS GI  Y
Sbjct: 500 ARSENNNFFSSSSSNTGLALPQSFMSS--VPQVASVDFNRRPETGSSMSMLPSSGGIYGY 559

Query: 327 GQDRVLPTIRSSGVGRSG---GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAI 386
           G   V  T   S    S    G +    T  ++IP +    ++G GG N+  IRR SGA+
Sbjct: 560 GSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAM 619

Query: 387 LTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ 411
           + I +S+         I GTS Q + A+ L Q
Sbjct: 620 IEISDSKNSHGGRVALISGTSEQKRTAENLFQ 638

The following BLAST results are available for this feature:

BLAST of CcUC11G219270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890982.1	1.0e-246	96.62	RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida]	[more]
TYK03085.1	2.1e-236	94.08	RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa]	[more]
XP_004149510.2	2.4e-235	93.87	RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus] >KG...	[more]
XP_016901887.1	2.3e-230	91.82	PREDICTED: RNA-binding KH domain-containing protein PEPPER [Cucumis melo]	[more]
XP_022996845.1	6.7e-230	91.14	RNA-binding KH domain-containing protein PEPPER-like [Cucurbita maxima]	[more]

BLAST of CcUC11G219270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZH4	1.7e-122	56.14	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SR13	6.4e-74	43.31	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
F4KDN0	7.6e-19	24.87	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
P57721	7.6e-19	28.61	Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2	[more]
P57722	7.6e-19	28.61	Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3	[more]

BLAST of CcUC11G219270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BVI2	1.0e-236	94.08	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0LMH4	1.2e-235	93.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1	[more]
A0A1S4E0X0	1.1e-230	91.82	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1K7W7	3.2e-230	91.14	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1EV22	2.1e-229	90.72	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=36...	[more]

BLAST of CcUC11G219270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26000.1	1.2e-123	56.14	RNA-binding KH domain-containing protein	[more]
AT3G04610.1	4.5e-75	43.31	RNA-binding KH domain-containing protein	[more]
AT1G51580.1	2.8e-24	27.41	RNA-binding KH domain-containing protein	[more]
AT5G64390.1	5.4e-20	24.87	RNA-binding KH domain-containing protein	[more]
AT5G46190.1	9.3e-20	29.22	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 82..155 e-value: 3.6E-9 score: 46.5 coord: 344..414 e-value: 6.9E-11 score: 52.2 coord: 170..245 e-value: 8.0E-9 score: 45.3
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 337..416 e-value: 2.8E-14 score: 54.5
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 341..414
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 168..251
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 77..138
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 86..138 e-value: 4.5E-11 score: 42.4 coord: 347..411 e-value: 1.5E-11 score: 43.9 coord: 174..238 e-value: 3.2E-10 score: 39.7
None	No IPR available	GENE3D	3.30.310.210		coord: 83..247 e-value: 1.2E-29 score: 105.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 72..459
None	No IPR available	PANTHER	PTHR10288:SF277	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER	coord: 72..459
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 171..240 score: 13.439081
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 345..409 score: 14.361462
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 83..150 score: 13.879309
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 85..154 e-value: 2.17467E-19 score: 79.8279
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 173..238 e-value: 3.92432E-16 score: 70.5831
None	No IPR available	CDD	cd00105	KH-I	coord: 347..410 e-value: 1.10493E-11 score: 57.9551

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G219270.1	CcUC11G219270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048467	gynoecium development
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0048579	negative regulation of long-day photoperiodism, flowering
biological_process	GO:0048577	negative regulation of short-day photoperiodism, flowering
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding