CcUC11G217710 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G217710
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	CLAVATA3/ESR (CLE)-related protein 45
Location	CicolChr11: 16076193 .. 16077295 (-)
RNA-Seq Expression	CcUC11G217710
Synteny	CcUC11G217710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTTAGTATACACAGAGTACTTGTTGTCCTCATGTGTGTTGTTGCACTTTTAGCTGTTAAACCAGATCAGGCTTGTGCTTCGAGAAGCATAGACCTTGCTCTAAGACCAAGCCGCCACATTCTAGTTGAAGACTCAAGGGTGGAGGAAATGAATATGAAAAGGAATTCACTACCACGAAACAACAAGTTCGATCCAAATAGATCAAGCAAAAGAAGGGTTCGACGAGGATCAGATCCTATCCACAACAGGTCTTAGTTCATTTCTTCTGTTTGCTGAAGGAACCCACAAGTTTGACATCAATTGAAGGAAAGAAACAGAGAAAGGTTGAGGCCACAGCAGAGGAAGAAACACCAGCAGGAATCTGGTTTCTCCCGTGGTTGGTTGGTTTGATGATTTATCCCTGTTTGATAACAATTCCGTTTTTAGTTTTCTATTTTTGAAAATTATGCTTGATTTTTCGCAGTTTCTTTGGTATATTTTTTTACCTTTCTTAAAAAGACATTTGACTTCTAAGCCAAATTTAAAAACAAAGACAATTTCTTTATTAAGAAAAAAATAGTTTAAAATTTTGGTTCAGATTTTGAAAATGTTTTAACAGAGTAGGTAACAAAACAAAGTTGAAATACCTTACTTATTTTTAAAAACGGAAAATTAAAAACAAAACTGTTATCAAATGGGTTTAATGTTTTGTTTTCAGAGTTATTGTTCTTGAGATGTGTATAGTAAAGCTTACTAGAGGAAGTCCAACACAATGCCTCCACACTGATACTAGAAGTGCAGTCACAAATTTAGCAGTAAAAAGATCACACAGATGAATGACAAAGAGTTGAGTTACTTCACAAAGTATCATTGAATTTCTTTTGAAGAGGGGTGAATCTGTTTGGAACTTCAAGTTCAAGTTTCAGGGTGCAACGAGATTCTTTTGTAATCCATCAGCTAGCTCTTAACAAAGCTTTTTTTATTAACTTAGTTCATCTTCTACGGATACTATTTTGGGAAATTATATAGAAGTTGTTCTCCTCTCTTTCCCAGAAATTGCTCAGTTACACTCAAATCTGCACACAATCAATTACCCATCTGCTCACTGTGGAGCCTAG

mRNA sequence

ATGGTTTTTAGTATACACAGAGTACTTGTTGTCCTCATGTGTGTTGTTGCACTTTTAGCTGTTAAACCAGATCAGGCTTGTGCTTCGAGAAGCATAGACCTTGCTCTAAGACCAAGCCGCCACATTCTAGTTGAAGACTCAAGGGTGGAGGAAATGAATATGAAAAGGAATTCACTACCACGAAACAACAAGTTCGATCCAAATAGATCAAGCAAAAGAAGGGTTCGACGAGGATCAGATCCTATCCACAACAGTTCATCTTCTACGGATACTATTTTGGGAAATTATATAGAAGTTGTTCTCCTCTCTTTCCCAGAAATTGCTCAGTTACACTCAAATCTGCACACAATCAATTACCCATCTGCTCACTGTGGAGCCTAG

Coding sequence (CDS)

ATGGTTTTTAGTATACACAGAGTACTTGTTGTCCTCATGTGTGTTGTTGCACTTTTAGCTGTTAAACCAGATCAGGCTTGTGCTTCGAGAAGCATAGACCTTGCTCTAAGACCAAGCCGCCACATTCTAGTTGAAGACTCAAGGGTGGAGGAAATGAATATGAAAAGGAATTCACTACCACGAAACAACAAGTTCGATCCAAATAGATCAAGCAAAAGAAGGGTTCGACGAGGATCAGATCCTATCCACAACAGTTCATCTTCTACGGATACTATTTTGGGAAATTATATAGAAGTTGTTCTCCTCTCTTTCCCAGAAATTGCTCAGTTACACTCAAATCTGCACACAATCAATTACCCATCTGCTCACTGTGGAGCCTAG

Protein sequence

MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSSSSTDTILGNYIEVVLLSFPEIAQLHSNLHTINYPSAHCGA

Homology

[Close]

BLAST of CcUC11G217710 vs. NCBI nr
Match: KAA0032271.1 (CLAVATA3/ESR (CLE)-related protein 45 [Cucumis melo var. makuwa] >TYK17075.1 CLAVATA3/ESR (CLE)-related protein 45 [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 2.9e-31
Identity = 77/86 (89.53%), Postives = 82/86 (95.35%), Query Frame = 0


Query: 1  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLP 60
          MVFSIHRVL+VL+  VALLAVKP+QACA RSIDLALRPSRHILVEDSRVEE+NMKRNSLP
Sbjct: 1  MVFSIHRVLIVLLMCVALLAVKPEQACALRSIDLALRPSRHILVEDSRVEELNMKRNSLP 60

Query: 61 RNNKFDPNRSSKRRVRRGSDPIHNSS 87
          +NNKFDPNRSSKRRVRRGSDPIHN S
Sbjct: 61 QNNKFDPNRSSKRRVRRGSDPIHNRS 86

[Close]

BLAST of CcUC11G217710 vs. NCBI nr
Match: KAG7029950.1 (hypothetical protein SDJN02_08294, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-30
Identity = 79/87 (90.80%), Postives = 82/87 (94.25%), Query Frame = 0


Query: 1  MVFSIHRVLVV-LMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSL 60
          MVFSIHRVLVV LMCVVALLAV+PDQACA RSIDLALR SRHILVEDSRVEE NMKRNSL
Sbjct: 1  MVFSIHRVLVVLLMCVVALLAVQPDQACAVRSIDLALRSSRHILVEDSRVEEKNMKRNSL 60

Query: 61 PRNNKFDPNRSSKRRVRRGSDPIHNSS 87
          PRN+KFDPN+SSKRRVRRGSDPIHN S
Sbjct: 61 PRNSKFDPNQSSKRRVRRGSDPIHNKS 87

[Close]

BLAST of CcUC11G217710 vs. NCBI nr
Match: KGN61380.1 (hypothetical protein Csa_006322 [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 9.4e-30
Identity = 78/87 (89.66%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 1  MVFSIHRVLVV-LMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSL 60
          M FSIHRVL+V LMCVVALLAVK DQACA RSIDLALRPSRHILVEDS VEE+NMKRNS 
Sbjct: 1  MGFSIHRVLIVLLMCVVALLAVKTDQACALRSIDLALRPSRHILVEDSTVEELNMKRNSQ 60

Query: 61 PRNNKFDPNRSSKRRVRRGSDPIHNSS 87
          PRNNKFDPNRSSKRRVRRGSDPIHN S
Sbjct: 61 PRNNKFDPNRSSKRRVRRGSDPIHNRS 87

[Close]

BLAST of CcUC11G217710 vs. NCBI nr
Match: KAG6598982.1 (hypothetical protein SDJN03_08760, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139.8 bits (351), Expect = 1.6e-29
Identity = 78/87 (89.66%), Postives = 81/87 (93.10%), Query Frame = 0


Query: 1  MVFSIHRVLVV-LMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSL 60
          MVFSIHRVLVV LMCVVALLAV+PDQACA RSIDLA R SRHILVEDSRVEE NMKRNSL
Sbjct: 1  MVFSIHRVLVVLLMCVVALLAVQPDQACALRSIDLAPRSSRHILVEDSRVEEKNMKRNSL 60

Query: 61 PRNNKFDPNRSSKRRVRRGSDPIHNSS 87
          PRN+KFDPN+SSKRRVRRGSDPIHN S
Sbjct: 61 PRNSKFDPNQSSKRRVRRGSDPIHNKS 87

[Close]

BLAST of CcUC11G217710 vs. NCBI nr
Match: KAG7036811.1 (hypothetical protein SDJN02_00431, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 104.8 bits (260), Expect = 5.7e-19
Identity = 66/87 (75.86%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 1  MVFSIHRV-LVVLMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSL 60
          MVFSIHRV LV+LMCVVALLAVKP+QAC   S+DLALRP RH+L ED R       RNS 
Sbjct: 1  MVFSIHRVLLVLLMCVVALLAVKPEQACGLTSMDLALRPIRHVL-EDPR------DRNSR 60

Query: 61 PRNNKFDPNRSSKRRVRRGSDPIHNSS 87
          PR NKFDPNRSSKRRVRRGSDPIHN S
Sbjct: 61 PR-NKFDPNRSSKRRVRRGSDPIHNRS 79

[Close]

BLAST of CcUC11G217710 vs. ExPASy TrEMBL
Match: A0A5A7SRV2 (CLAVATA3/ESR (CLE)-related protein 45 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1327G00220 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-31
Identity = 77/86 (89.53%), Postives = 82/86 (95.35%), Query Frame = 0


Query: 1  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSLP 60
          MVFSIHRVL+VL+  VALLAVKP+QACA RSIDLALRPSRHILVEDSRVEE+NMKRNSLP
Sbjct: 1  MVFSIHRVLIVLLMCVALLAVKPEQACALRSIDLALRPSRHILVEDSRVEELNMKRNSLP 60

Query: 61 RNNKFDPNRSSKRRVRRGSDPIHNSS 87
          +NNKFDPNRSSKRRVRRGSDPIHN S
Sbjct: 61 QNNKFDPNRSSKRRVRRGSDPIHNRS 86

[Close]

BLAST of CcUC11G217710 vs. ExPASy TrEMBL
Match: A0A0A0LHH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G101100 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.5e-30
Identity = 78/87 (89.66%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 1  MVFSIHRVLVV-LMCVVALLAVKPDQACASRSIDLALRPSRHILVEDSRVEEMNMKRNSL 60
          M FSIHRVL+V LMCVVALLAVK DQACA RSIDLALRPSRHILVEDS VEE+NMKRNS 
Sbjct: 1  MGFSIHRVLIVLLMCVVALLAVKTDQACALRSIDLALRPSRHILVEDSTVEELNMKRNSQ 60

Query: 61 PRNNKFDPNRSSKRRVRRGSDPIHNSS 87
          PRNNKFDPNRSSKRRVRRGSDPIHN S
Sbjct: 61 PRNNKFDPNRSSKRRVRRGSDPIHNRS 87

[Close]

BLAST of CcUC11G217710 vs. ExPASy TrEMBL
Match: A5APJ5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_010312 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.2e-11
Identity = 51/95 (53.68%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 1  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSR--HILVEDSR-------VEE 60
          MVFS  RVLV L+C + +LAV+PD+    RSIDL LR S+  H+L   ++       VE+
Sbjct: 1  MVFSAQRVLVFLIC-IGVLAVEPDKVSGLRSIDLVLRQSQEDHMLAPKNQRILKAVVVED 60

Query: 61 MNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS 87
          +N + N+ P N KFD N+SSKRRVRRGSDPIHN S
Sbjct: 61 LNREENAAPVNKKFDLNQSSKRRVRRGSDPIHNRS 94

[Close]

BLAST of CcUC11G217710 vs. ExPASy TrEMBL
Match: A0A067GTG0 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034426mg PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.8e-11
Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 1  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRH---------ILVEDSRVEE 60
          MVF   RVL++L+C+  LL+V+PD+    RSIDL LR ++H          +++++ +  
Sbjct: 1  MVFFARRVLILLICMGLLLSVQPDKVSGLRSIDLVLRQNQHNQGMVPQNQRILKETTMVG 60

Query: 61 MNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS 87
          MN ++ S   +NKFDPN+SSKRRVRRGSDPIHN S
Sbjct: 61 MNAEKKSTKIHNKFDPNQSSKRRVRRGSDPIHNRS 95

[Close]

BLAST of CcUC11G217710 vs. ExPASy TrEMBL
Match: V4VH78 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033178mg PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.8e-11
Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 1  MVFSIHRVLVVLMCVVALLAVKPDQACASRSIDLALRPSRH---------ILVEDSRVEE 60
          MVF   RVL++L+C+  LL+V+PD+    RSIDL LR ++H          +++++ +  
Sbjct: 1  MVFFARRVLILLICMGLLLSVQPDKVSGLRSIDLVLRQNQHNQGMVPQNQRILKETTMVG 60

Query: 61 MNMKRNSLPRNNKFDPNRSSKRRVRRGSDPIHNSS 87
          MN ++ S   +NKFDPN+SSKRRVRRGSDPIHN S
Sbjct: 61 MNAEKKSTKIHNKFDPNQSSKRRVRRGSDPIHNRS 95

The following BLAST results are available for this feature:

BLAST of CcUC11G217710 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032271.1	2.9e-31	89.53	CLAVATA3/ESR (CLE)-related protein 45 [Cucumis melo var. makuwa] >TYK17075.1 CLA...	[more]
KAG7029950.1	2.5e-30	90.80	hypothetical protein SDJN02_08294, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KGN61380.1	9.4e-30	89.66	hypothetical protein Csa_006322 [Cucumis sativus]	[more]
KAG6598982.1	1.6e-29	89.66	hypothetical protein SDJN03_08760, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7036811.1	5.7e-19	75.86	hypothetical protein SDJN02_00431, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CcUC11G217710 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC11G217710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SRV2	1.4e-31	89.53	CLAVATA3/ESR (CLE)-related protein 45 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0LHH0	4.5e-30	89.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G101100 PE=4 SV=1	[more]
A5APJ5	1.2e-11	53.68	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_010312 PE=4 SV=1	[more]
A0A067GTG0	2.8e-11	48.42	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034426mg PE=4 SV=1	[more]
V4VH78	2.8e-11	48.42	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033178mg PE=4 ...	[more]

BLAST of CcUC11G217710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..80
None	No IPR available	PANTHER	PTHR36726:SF4	CLAVATA3/ESR (CLE)-RELATED PROTEIN 45	coord: 1..85
IPR038821	CLE-related protein 45-like	PANTHER	PTHR36726	CLAVATA3/ESR (CLE)-RELATED PROTEIN 45	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G217710.1	CcUC11G217710.1	mRNA