CcUC11G216640 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC11G216640
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr11: 10373640 .. 10378462 (-)
RNA-Seq ExpressionCcUC11G216640
SyntenyCcUC11G216640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGGATCTCAAGGTTGCAAGCAACCCAAAGGTTATAGCCCCAGTTAAAGTGAACGCTAGCTGTCAATGTCAAAAATCCAATTTAATGAGGAAAGAGAAGCAAGTCCTTAGTACACTTCATGAGCTAATTGAAGTTATTCAAATTGAAAACATTAATGATTTTAATGCTGCAAAAAGTGAATGGTTGTCACTTGATATTCCCTTGAAGGTAGTTCAAAAGGTTTTTTCTCCAAACATCTGCTCTTCACGACTTGATTCAACTTCCATGAATATCAACCTCCATCCACATGTATAAGGCCTCCAGTATACCCTTGTGTTAATGTTACTTCTACGAATTCAAAAAATAACGGCGCTAGGTTTTTTTATGGATCTTTTTCCTTACTTGGCCGGTGAACAGATAGTCTCTTGCCCTGTTTTACATCATCCCCATTCAGTTCCCACGAAATTTGTGAGATTGTTGAAGCCTTGTCCAAAACACTTTTCTAAGAAGAAGACTTCTTTCCTCAGATCACTCTCGGCCATTGCTAATACAGATCTTTTAGAAGAAAGTTGTTGAAGGGCTCAAGCTCCGAGTGTGAGTTAAAAGAGCTGCTATTTCACCCCCTTCTCCAAAGTTTCTGCAGTCTGTTGTTAAAATCTCTTATTTCACTTTTGTAAGAGGCATCCCTTGCTCTTCTACAAGCTCTTCCCAATCAAGAAAGCAAGACTCAGATATTGATTAACAGTAAGTGCTAGTAGTGAAGACATTGAGGAGTCTGAGAGTGAGATTGAGCAAGAGGAGCCAGCCCTTGTTGACAACTTTGGCAAAGACTTATGTGAATTATTTCAGCTTGAAGAAAACCTGAAATCGATCATTTCTGATGTATCTAGACTTCCACCTTTGAACAAGTCTGTTATTCTTTTTTTTATTTTTTGAAAAGAAACGAGCCTCTTCATTAAGATTATGAATTGAGACATACAATGTAATAGAAACAAGAGTAGGCCTAAGGATCAGCGAGTGCACCCGGACATCTCAACTAGGTTGACACCCCCTTAGAACTCTCATCATATCCTAAACAATTAAATATCAAAGACAAGTATAAGAACTATAGAGATCGAAAATACAATAAAATACAATTTGCTTCTAAAGATAAACACTAGACATTGGGAAAATAAAAGCCTTCCAATTGATGCTAATATCTTAAATGGAGAAATCTTAAAACTTCTTGGAGATAGAACACCATGCCGACGCATTTAACCGAGCTGTCTCGAATCTCACCAACCAAGGGGAGGCTTTATCATGGAACACCCTTTGATTTCTTTCAAGCCAAATTTCAGATAAAATTGCCTTTACTGCGTTGACCAAATTAACATTGGTCTAGATTTCAGCTTAGGACCAATCAATACTTGTAGTACGTTGCTTTTAAACACTTTATCGAAGGACCAGCTTAGGTTAAAGCAGTCGAACAAGCTAAAACCAGCAGCTTTTTGCGTAGATACAGTTGAAGAATAGGTGCTGTAAATCCTCGAAATCTGCCAAGCATATGGGGCAAACATGTGGGGATAGGTATTGAGAAGGGAGCTTTAATTGTAACACTGAAGCACAGTTCAAAAGACCTTCAATCATTATCCAAATAATGATATTGACCCTCTTGGGGCATTTGGATTTCCAAAGAGTCTTCCAATAGTTTTTCAATTGGGTGGGTTTTGGAGAGATGCTTAACAAGGGATTTTACGGAAAAGATACCATTAGCTTCTAGCTTCCAATACCGCTTGTCCTTGTTTGTGGCAATTGACATTTCAGAGATTAACCCAAGGAGAGATTGAAAGTCATCAATCTCTTCTTCTTTGAGCGCCCGTCTAAAGGTAATGGACCAAGAGGAGTGAAGGAAATCCCAAAAATCTGCTACTGCTCCTTTCTGGTTCAAGGAAATTCTATAAAGTCATGGGAATGATACACTAAGCGAGGTGGAACCCACCCAATGGTCAAGCCAAAACGCCACTTTCCTTCCATCTCCCACCTTGAAACCCGCCAAATCTTCTACTTTTTTCCAGCATCTTGAAATGTTAATCCACGGACTACGAAGGCTAGAACCTACAACTCCACTAGTGGAGCTAAAACAATATACTCTACTTCAATACTACTTCTGGCCAACAGCTAATTATCTTATTTATAACCGGAGAGAGAATGGAAGTAGTTAGCTGCAAGATCAATGGAAGCTTCTTTTGTTCTTGGTTCGAAGATGGGAAATTCCTCGTCGAAGACTTGGAAGCACGGAAAGTAGTTCATCTATCGGAGATGCATATGTTTTGGACGGTACAACAAATCAAAGACCATCTCAATGGATCAAGTGTTCGATTCTTTCTAAGGGATATCCAGGACACTTCAGGAGCAGTGAAATTATCAAAATGGAAGAATAACTCGGGGTGGAACTTAAGATGCGTGGTGTGGCCAGCTACCCGTGGGCGTTTTTACATTCACGTACCTGAAGGGGCAGCGGAACAGGGCTGGAAAGAGTTTTTGGAAATGCTCAACAGTTGCATCCATCAAACAGGGAGTTCGAGAGTGAGCAAGGAGAAAATTCAGGATACTCTTCTTCTGCCAACTAAGCCTCAACCAAGCTTTGCAGAGGTTTTATCTCAAGGAATAAGACAACCAAAGGCTCCTGTTCGGGCTCCACTAACACAAGGCTTAATGAAGGCAACTCATGTGCATTCGAATCCCTCTGTTTCTGCAAAACAAAGCAAGCACCTCCAATGGATCCGAAGGAGAACGAAGTTTTGAAGGAAGATTTTGAGAATTTGTGGGTGGTGTCCAAATTATTCGCATTCGATGAATGGAAGAGTATCGGTCAATTCTTAGAAGATCTTTATCAAGTCAAAGTCAACATTAATACTCTGTTTGCCGATAAAGCCTTGATAAAAGTTTCTCAAGGAAACTTAGAAATGATGATTGAAACACCAGGAAAATGGTTCGACTACCGAAAGTTCCATCTTCTATTTGAAAAATGGAATCCTATTCAGCATAGTCGGCCCACTTGTATCAAAGGCTATGGAGGATGGTTGGCCATTAGAAATCTCCCTTTAGAATACTGGAATAGAGCCACATTTGAAGCCATCGGTTCTCATTTTGGAGGGTTGGAAGAGATAGTCCTAGAAACACTTAATCTTCTGAATGTATCAGAAGCTAAAATAAAAGTCCAAAAGAATTTGTGTGGTTTTATGCCAGCATCAATTGAAATCAAAAATGAATTGACAGGCTCAGTGGTATTAACTTTCGGGGACATTGAAGCAGTAGAAGCCCCTTCTTACGTTCATAAGGAGTTATTTTATAATGATTTCAACAATTCGATAGATCAATATAGAGTGAATAAAGTGGCAGAGGATGAAGATGGCGGTTTTAGTTCACTAAGCCACATAAAAGAGGGTCGAAAGTTTATTCCATCGTCGGAGAAAGTGTTGGAAAAGGCAGAGTGTGATGTAATTGTCGTGCCGGCTGCAAGGAATGTTGAAGGCCAGGATCTAACAAGAGGTGCGTCTTTTCAGATCCTCAGCCAAAAAGATGAAAAGTCTATTCCGTGTGAGAACAAAGGAGGAGTTGAAAAGTTGGAAGTTAATTGGAGAGAGAATTTCGGCGGTTGCAATTGTCGTCTTCCAGGGTCGGATGAGGAAAGGCAATCAGTAATCCGAGCCAGAATCCCAACGAGATTCCCAGCGAGATCCATTCCGGGACTTAGACTCGCATCCCACATTCCCAGCGAGACTCCCACGATAACCAATCCGAGAGTCGTCTTGCTACCCAGATTCCCAGCGAGAGTCCCAACGAGAACCAATCCAAGTGTCAACTCACTTCCCGGATTCCCAGCGAGATTCCCAACGAGAACCAATACGGGAGTCGACTCGCATCCCAAATTCACAGCGAGACTTCCAGCGAGATCCATTCTGGGAGTCGCCTTGCATTCCATGAGCAACGCGCATTTATTATTGATTCAAGCCTTGAAAGCAATATTAAAGAGGGAGAAATTGAAAAGTCGCTTGAAATGGAAAAGTCAGCCATTTTAATCCAGCGTGTGGGCAATAAAGGAAGGTACATTAAAGATGGAGTCTCCTTTAAATTCGGCCGGTCCAATCGATTCACCTTCCCGCCGAACACTTCAAAGGATAAACAAGATGTATTCGAAAAGTCACCTGCAAGAATTTTGGGCGATGGCATTATTACGCATGCATTTAATAATGTGGTATTCCGTGAACCAATGACAGCAATGACAGAAGGGACAGCCACCCCAACTGAAGCCCCTCCGGAATCCCAATCGGCTTTTCCAGTACCTTTATCCTTTGGCATTATTCCAAGATTAGATTGGACATCAAATCCCAAGAGAGATAGTTCAGCATTTGTGGTCCAAGGCGGGAGTTCCAAAGGAAGTCAAAAACTTCTCAGACCCTTCAATAAACACTTCATCCGAAAGAAAACTCCATTCAACAATTCATGGACAGCCATTGCGAACTGGGATTTGTTTGAAGAATGTTGTGTCAAAATTCACTATCAAGGTTCATCCCATATCAGGTCAGATCATCATATCTCCAAGAATAATTCCTTTTCCCAAGCAGAATTTAAAATCCCTGGCTCTAACTCACCCTTTATTCGAGGTATCCTAAGGCCCGATAATCGTGGGGTGCAAATCAATAAAGAAGATGAAGATTCAATTGTAAGCGCCTAGTAGTGATGATTTGGACTACTTAGGCTCTGAGGAAGATTTGGAAGAGGAGGCCCTTTTATCTAACAATGGAAGTGCTTTGAAGAATCTGTTCCAATCTATGGATAATCAAGACCTTGACACTGTGAAA

mRNA sequence

GAGGATCTCAAGGTTGCAAGCAACCCAAAGGTTATAGCCCCAGTTAAAGTGAACGCTAGCTGCCTCCAGTATACCCTTGTGTTAATGTTACTTCTACGAATTCAAAAAATAACGGCGCTAGAGTGTGATGTAATTGTCGTGCCGGCTGCAAGGAATGTTGAAGGCCAGGATCTAACAAGAGGTGCGTCTTTTCAGATCCTCAGCCAAAAAGATGAAAAGTCTATTCCGTGTGAGAACAAAGGAGGAGTTGAAAAGTTGGAAGTTAATTGGAGAGAGAATTTCGGCGGTTGCAATTGTCGTCTTCCAGGGTCGGATGAGGAAAGGCAATCAGTAATCCGAGCCAGAATCCCAACGAGATTCCCAGCGAGATCCATTCCGGGACTTAGACTCGCATCCCACATTCCCAGCGAGACTCCCACGATAACCAATCCGAGAGTCATTCCCAGCGAGAGTCCCAACGAGAACCAATCCAAGTGTCAACTCACTTCCCGGATTCCCAGCGAGATTCCCAACGAGAACCAATACGGGAGTCGACTCGCATCCCAAATTCACAGCGAGACTTCCAGCGAGATCCATTCTGGGAGTCGCCTTGCATTCCATGAGCAACGCGCATTTATTATTGATTCAAGCCTTGAAAGCAATATTAAAGAGGGAGAAATTGAAAAGTCGCTTGAAATGGAAAAGTCAGCCATTTTAATCCAGCGTGTGGGCAATAAAGGAAGGTACATTAAAGATGGAGTCTCCTTTAAATTCGGCCGGTCCAATCGATTCACCTTCCCGCCGAACACTTCAAAGGATAAACAAGATGTATTCGAAAAGTCACCTGCAAGAATTTTGGGCGATGGCATTATTACGCATGCATTTAATAATGTGGTATTCCGTGAACCAATGACAGCAATGACAGAAGGGACAGCCACCCCAACTGAAGCCCCTCCGGAATCCCAATCGGCTTTTCCAGTACCTTTATCCTTTGGCATTATTCCAAGATTAGATTGGACATCAAATCCCAAGAGAGATAGCTCTGAGGAAGATTTGGAAGAGGAGGCCCTTTTATCTAACAATGGAAGTGCTTTGAAGAATCTGTTCCAATCTATGGATAATCAAGACCTTGACACTGTGAAA

Coding sequence (CDS)

GAGGATCTCAAGGTTGCAAGCAACCCAAAGGTTATAGCCCCAGTTAAAGTGAACGCTAGCTGCCTCCAGTATACCCTTGTGTTAATGTTACTTCTACGAATTCAAAAAATAACGGCGCTAGAGTGTGATGTAATTGTCGTGCCGGCTGCAAGGAATGTTGAAGGCCAGGATCTAACAAGAGGTGCGTCTTTTCAGATCCTCAGCCAAAAAGATGAAAAGTCTATTCCGTGTGAGAACAAAGGAGGAGTTGAAAAGTTGGAAGTTAATTGGAGAGAGAATTTCGGCGGTTGCAATTGTCGTCTTCCAGGGTCGGATGAGGAAAGGCAATCAGTAATCCGAGCCAGAATCCCAACGAGATTCCCAGCGAGATCCATTCCGGGACTTAGACTCGCATCCCACATTCCCAGCGAGACTCCCACGATAACCAATCCGAGAGTCATTCCCAGCGAGAGTCCCAACGAGAACCAATCCAAGTGTCAACTCACTTCCCGGATTCCCAGCGAGATTCCCAACGAGAACCAATACGGGAGTCGACTCGCATCCCAAATTCACAGCGAGACTTCCAGCGAGATCCATTCTGGGAGTCGCCTTGCATTCCATGAGCAACGCGCATTTATTATTGATTCAAGCCTTGAAAGCAATATTAAAGAGGGAGAAATTGAAAAGTCGCTTGAAATGGAAAAGTCAGCCATTTTAATCCAGCGTGTGGGCAATAAAGGAAGGTACATTAAAGATGGAGTCTCCTTTAAATTCGGCCGGTCCAATCGATTCACCTTCCCGCCGAACACTTCAAAGGATAAACAAGATGTATTCGAAAAGTCACCTGCAAGAATTTTGGGCGATGGCATTATTACGCATGCATTTAATAATGTGGTATTCCGTGAACCAATGACAGCAATGACAGAAGGGACAGCCACCCCAACTGAAGCCCCTCCGGAATCCCAATCGGCTTTTCCAGTACCTTTATCCTTTGGCATTATTCCAAGATTAGATTGGACATCAAATCCCAAGAGAGATAGCTCTGAGGAAGATTTGGAAGAGGAGGCCCTTTTATCTAACAATGGAAGTGCTTTGAAGAATCTGTTCCAATCTATGGATAATCAAGACCTTGACACTGTGAAA

Protein sequence

EDLKVASNPKVIAPVKVNASCLQYTLVLMLLLRIQKITALECDVIVVPAARNVEGQDLTRGASFQILSQKDEKSIPCENKGGVEKLEVNWRENFGGCNCRLPGSDEERQSVIRARIPTRFPARSIPGLRLASHIPSETPTITNPRVIPSESPNENQSKCQLTSRIPSEIPNENQYGSRLASQIHSETSSEIHSGSRLAFHEQRAFIIDSSLESNIKEGEIEKSLEMEKSAILIQRVGNKGRYIKDGVSFKFGRSNRFTFPPNTSKDKQDVFEKSPARILGDGIITHAFNNVVFREPMTAMTEGTATPTEAPPESQSAFPVPLSFGIIPRLDWTSNPKRDSSEEDLEEEALLSNNGSALKNLFQSMDNQDLDTVK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC11G216640.1CcUC11G216640.1mRNA