CcUC11G215550 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G215550
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein of unknown function (DUF 3339)
Location	CicolChr11: 8108055 .. 8108267 (+)
RNA-Seq Expression	CcUC11G215550
Synteny	CcUC11G215550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATTGGGGTCCGGTTTTCGTGGCGGTTGTGCTCTTCGTTCTTCTAACTCCTGGGTTGCTGGTTCAGATGCCAGGCAAGAACCGGTTCGTCGAATTTGGGAATTTTCAGACCAGTGGAGTCTCTATTCTGGTTCATTCCATTCTCTATTTTGCCTTAATTTGTATCTTCTTGTTGGCTGTTGGTGTTCATGTTTATATGGGCTCCTAA

mRNA sequence

ATGGCGGATTGGGGTCCGGTTTTCGTGGCGGTTGTGCTCTTCGTTCTTCTAACTCCTGGGTTGCTGGTTCAGATGCCAGGCAAGAACCGGTTCGTCGAATTTGGGAATTTTCAGACCAGTGGAGTCTCTATTCTGGTTCATTCCATTCTCTATTTTGCCTTAATTTGTATCTTCTTGTTGGCTGTTGGTGTTCATGTTTATATGGGCTCCTAA

Coding sequence (CDS)

ATGGCGGATTGGGGTCCGGTTTTCGTGGCGGTTGTGCTCTTCGTTCTTCTAACTCCTGGGTTGCTGGTTCAGATGCCAGGCAAGAACCGGTTCGTCGAATTTGGGAATTTTCAGACCAGTGGAGTCTCTATTCTGGTTCATTCCATTCTCTATTTTGCCTTAATTTGTATCTTCTTGTTGGCTGTTGGTGTTCATGTTTATATGGGCTCCTAA

Protein sequence

MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

Homology

[Close]

BLAST of CcUC11G215550 vs. NCBI nr
Match: XP_022134304.1 (uncharacterized protein LOC111006599 [Momordica charantia])

HSP 1 Score: 136.7 bits (343), Expect = 7.5e-29
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAVVLFVLLTPGLLVQMPGK+RFVEFGNFQTSGVSILVHSILYFALICIFLL
Sbjct: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60

Query: 61 AVGVHVYMGS 71
          AVGVHVYMGS
Sbjct: 61 AVGVHVYMGS 70

[Close]

BLAST of CcUC11G215550 vs. NCBI nr
Match: XP_023551540.1 (uncharacterized protein LOC111809330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.3 bits (342), Expect = 9.8e-29
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLL
Sbjct: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLL 60

Query: 61 AVGVHVYMGS 71
          AVGVHVYMGS
Sbjct: 61 AVGVHVYMGS 70

[Close]

BLAST of CcUC11G215550 vs. NCBI nr
Match: XP_022993368.1 (uncharacterized protein LOC111489412 [Cucurbita maxima])

HSP 1 Score: 136.3 bits (342), Expect = 9.8e-29
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLL
Sbjct: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLL 60

Query: 61 AVGVHVYMGS 71
          AVGVHVYMGS
Sbjct: 61 AVGVHVYMGS 70

[Close]

BLAST of CcUC11G215550 vs. NCBI nr
Match: XP_022939120.1 (uncharacterized protein LOC111445120 [Cucurbita moschata])

HSP 1 Score: 136.3 bits (342), Expect = 9.8e-29
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLL
Sbjct: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLL 60

Query: 61 AVGVHVYMGS 71
          AVGVHVYMGS
Sbjct: 61 AVGVHVYMGS 70

[Close]

BLAST of CcUC11G215550 vs. NCBI nr
Match: KAG6578365.1 (hypothetical protein SDJN03_22813, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 136.3 bits (342), Expect = 9.8e-29
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLL
Sbjct: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLL 60

Query: 61 AVGVHVYMGS 71
          AVGVHVYMGS
Sbjct: 61 AVGVHVYMGS 70

[Close]

BLAST of CcUC11G215550 vs. ExPASy TrEMBL
Match: A0A6J1BYE9 (uncharacterized protein LOC111006599 OS=Momordica charantia OX=3673 GN=LOC111006599 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.6e-29
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAVVLFVLLTPGLLVQMPGK+RFVEFGNFQTSGVSILVHSILYFALICIFLL
Sbjct: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60

Query: 61 AVGVHVYMGS 71
          AVGVHVYMGS
Sbjct: 61 AVGVHVYMGS 70

[Close]

BLAST of CcUC11G215550 vs. ExPASy TrEMBL
Match: A0A6J1K207 (uncharacterized protein LOC111489412 OS=Cucurbita maxima OX=3661 GN=LOC111489412 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.8e-29
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLL
Sbjct: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLL 60

Query: 61 AVGVHVYMGS 71
          AVGVHVYMGS
Sbjct: 61 AVGVHVYMGS 70

[Close]

BLAST of CcUC11G215550 vs. ExPASy TrEMBL
Match: A0A6J1FLS0 (uncharacterized protein LOC111445120 OS=Cucurbita moschata OX=3662 GN=LOC111445120 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.8e-29
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLL
Sbjct: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLL 60

Query: 61 AVGVHVYMGS 71
          AVGVHVYMGS
Sbjct: 61 AVGVHVYMGS 70

[Close]

BLAST of CcUC11G215550 vs. ExPASy TrEMBL
Match: A0A5D3BUE1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00130 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.9e-28
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAV+LFVLLTPGLLVQMPGK+RFVEFGNFQTSGVSILVHSILYFALICIFLL
Sbjct: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60

Query: 61 AVGVHVYMGS 71
          AV VHVYMGS
Sbjct: 61 AVRVHVYMGS 70

[Close]

BLAST of CcUC11G215550 vs. ExPASy TrEMBL
Match: A0A540LU73 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_024378 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-27
Identity = 61/70 (87.14%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          M+DWGPVF+AVVLF+LLTPGLL+QMPGK+RFVEFGNFQTSGVSILVHSI+YFALICIFLL
Sbjct: 1  MSDWGPVFIAVVLFILLTPGLLIQMPGKSRFVEFGNFQTSGVSILVHSIIYFALICIFLL 60

Query: 61 AVGVHVYMGS 71
          A+GVH+Y+GS
Sbjct: 61 AIGVHMYVGS 70

[Close]

BLAST of CcUC11G215550 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-24
Identity = 46/69 (66.67%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          M+DWGPV V V+LFV+LTPGLL Q+PG+ ++VEFGNFQTS VS++VHS+LYF+L+C+FLL
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 AVGVHVYMG 70
          A+ +H+Y+G
Sbjct: 61 ALKIHIYIG 69

[Close]

BLAST of CcUC11G215550 vs. TAIR 10
Match: AT3G27030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 1.9e-22
Identity = 45/66 (68.18%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          M DWGPVFVAV LFVLLTPGLL+Q+PG+ R VEFG FQTSG+S++VH+++YF L+CI LL
Sbjct: 1  MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 61 AVGVHV 67
          A+ +H+
Sbjct: 61 ALQIHI 66

[Close]

BLAST of CcUC11G215550 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 99.8 bits (247), Expect = 9.5e-22
Identity = 47/70 (67.14%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPV VAV+LFVLLTPGLL Q+P + R VEFGN QTSG SILVH+I++F LI IF +
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 AVGVHVYMGS 71
          A+ +H+Y G+
Sbjct: 61 AIRLHIYTGT 70

[Close]

BLAST of CcUC11G215550 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 96.7 bits (239), Expect = 8.0e-21
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPV +AV+LFV+L+PGLL Q+P   R VEFGN QTSG SILVH+I++F LI IF +
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 AVGVHVYMG 70
          A+ VH+Y G
Sbjct: 61 AINVHIYSG 69

[Close]

BLAST of CcUC11G215550 vs. TAIR 10
Match: AT5G40980.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 89.0 bits (219), Expect = 1.7e-18
Identity = 38/66 (57.58%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 2  ADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLA 61
          ADWGPV VAV LF+LL+PGLL Q+P + R +EFGN  TSG+SILVH+I+YF ++ I ++A
Sbjct: 3  ADWGPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVHAIIYFCILTILIIA 62

Query: 62 VGVHVY 68
          + +H++
Sbjct: 63 IQIHIH 68

The following BLAST results are available for this feature:

BLAST of CcUC11G215550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134304.1	7.5e-29	98.57	uncharacterized protein LOC111006599 [Momordica charantia]	[more]
XP_023551540.1	9.8e-29	97.14	uncharacterized protein LOC111809330 [Cucurbita pepo subsp. pepo]	[more]
XP_022993368.1	9.8e-29	97.14	uncharacterized protein LOC111489412 [Cucurbita maxima]	[more]
XP_022939120.1	9.8e-29	97.14	uncharacterized protein LOC111445120 [Cucurbita moschata]	[more]
KAG6578365.1	9.8e-29	97.14	hypothetical protein SDJN03_22813, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CcUC11G215550 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC11G215550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYE9	3.6e-29	98.57	uncharacterized protein LOC111006599 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1K207	4.8e-29	97.14	uncharacterized protein LOC111489412 OS=Cucurbita maxima OX=3661 GN=LOC111489412...	[more]
A0A6J1FLS0	4.8e-29	97.14	uncharacterized protein LOC111445120 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A5D3BUE1	6.9e-28	95.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A540LU73	2.6e-27	87.14	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_024378 PE=4 SV=1	[more]

BLAST of CcUC11G215550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08391.1	1.6e-24	66.67	Protein of unknown function (DUF 3339)	[more]
AT3G27030.1	1.9e-22	68.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G48660.1	9.5e-22	67.14	Protein of unknown function (DUF 3339)	[more]
AT5G63500.1	8.0e-21	65.22	Protein of unknown function (DUF 3339)	[more]
AT5G40980.1	1.7e-18	57.58	Protein of unknown function (DUF 3339)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021775	Protein of unknown function DUF3339	PFAM	PF11820	DUF3339	coord: 1..67 e-value: 3.7E-36 score: 123.1
IPR021775	Protein of unknown function DUF3339	PANTHER	PTHR33128	OS05G0103400 PROTEIN	coord: 1..69
None	No IPR available	PANTHER	PTHR33128:SF71	BNAC07G48990D PROTEIN	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G215550.1	CcUC11G215550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005635	nuclear envelope