CcUC11G215130 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G215130
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	thylakoid lumenal 15 kDa protein 1, chloroplastic
Location	CicolChr11: 7407782 .. 7410090 (-)
RNA-Seq Expression	CcUC11G215130
Synteny	CcUC11G215130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATAAGAATATTTGATGTAAAGATGTTGTTTGTGAGTTGTTAGATCCAATATCTGAAAAGTTAGTTGTCATTCCTATTATCTAATCCCTTGCACATTCTTGAAGGACTATGAATTAAGTGAAAGTAGTACCACGTGGCAAAATCTACGTGGACAAAGGGAGGAGAAGTAAGATACAGCAGCTGCAGGGAAACACAACTCATAATCCGTTTCCAGATTATGGTGTGCGGTCCGTCACATTATCCAATTGGAAAAAGGCACTAAAACTAAAACAATGCTGGGCTGAATTGCAGCTTCGTGAAAATGGCTCTTCTCAACGCTTCATTATGTTGTTCCAATTCCAGGTTTCCTTCCCGACTTCACCTTCCTCTTCCTCCCTCCATTTCCGATCATTCTACGCCTCAGGTAAACTCCCCCCCTCCATTTCCCATCCCAATTTCTTCTCCTTTCTCCTCAAATCCTATTATTTTATCCACAATGTGAAGGTATTAAACCAACAACTGCAAGCTACGCGGAATTTGGTCCTTTCCGTCGGAGAATCCGCCTCAAAAGCAACCTTCCTCGCTTTCCTTTCCGCCTCTGTCTTCCTCGCCGATCCTGCCCTAGCTTTTAAGGTTAATTTCCCACCGAAACTGCTCATAGCTGCATTGGATGATAATTTATTTTGATTGTTATATCTGTATGTATTGTATGATTGATTGATCGATTGATTTTTGGTGAACGGATTCAATTTCGTAATTAGGGCGGAGGTCCTTATGGCGCTGGGGTCACTAGAGGTCAGGATCTCTCTGGGAAAGATTTCAGTGGGAAGACGTTAATCAAGCAAGACTTCAAAACGGTTTCAGCTAAATTCCCTATCTCAAATGTTGTACATGTACTACAGTAATATGTGTTTGTGACATTGCTTTATGTTTCCTTTTGGTTAGTCTATTTTACGGCAAGCTAATTTTAAAGGTGCGAAGTTATTAGGTGCTAGCTTCTTCGATGCTGATTTAACAGGTTCATTATTTCTGTGTTTTTAAGTAATTTTATGAACTGGGTAACACAATCCTATTAATGCTGACTTCAATGCTTTCTTTCTTTGCTTAATTGTTAGGGGCGGATCTTTCAGATGCTGATCTCAGAGGTGCAGACTTTTCTTTGGCCAATGTTACCAAGGTGATGATTGTTTGATACGTTTACAATTAAATGCTTCCTTGTTTAATCTTTAATTTGCCCTTTCTGAAATTTTCAAATTTAAAAAATTATATTATATATATATATAAAGTTAGGAGGTCATCTCAGTCTTGAATGTTCAAAAATTTGATAAAAAATGATGGGAAACTACTCTGCAAAAAGTATTGTTGTGACACAATAACCTTGAACTGTGTTTGCAGTTCGAGATGCAGAATAACCTGCAGTTTTTATCTGAGATTTTACATTCAAATTTTGTGCTTTGATGTTAGAAGTCATTGAAGTTATAACTTTAACCTGAATGGTTGGTTTTTTCTGCTTTGGGCAGGCAAACTTAAGCAATGCCAACTTAGAGGGTGCGCTTGCCACAGGAAATACTTCTTTCCGTGGATCAACAATAAACGGAGCTGGTATATAAAACCAACATTTATGTAGCTTTTAGTATTTCATTGGCGGTCCTTTCATCTCCAAAATTGTTTCAGATCCCATAATACATTAACATAGGTTGTTATTCCAACCTCTATTTTTCATAAATTTGAAACTCTACACTTTTAGCTTTGAATTTAGCTGAAACTCATTTTTGTCAGCAATGCATTTAGCTCAAAGAGTTGTAGGAAATTGTAATTGAGGTAACAAGTATGGTTTTCTACAAGAGTATGGAAAAACTGTCGAAGAGTGGTGCTACGAAGAAATACTTACGCATGATTTACCTCATAATGGCAGACTTCACTGACGTGCCTTTGAGAGAGGATCAGCGGGAATACCTTTGCAAAGTTGCAGATGGGTAAAGACGAATTCTTCTGTTTCTTATGTTGACTGTAAATGATTCATGATAAATATACTAGGAGACTTGGTGATTTTTGTTTATAGGGTGAACCCAACAACTGGAAATGCAACCCGGGAGACCTTGCTCTGTGATTGAGACTCGAATTATACGGCAAGCCATTGAGGTACAAGAATCGTACAGATCAACCTATAAATGTATAAAGTTTTTAATAACCATATCAGTATCCAATCCAATGAGTTCAATTTTGTCAATCATCTATTAATGTCTCCTTATACCATGTTTTCTATCATGAGGTTTGTCGACATCATAAAGCTTAACGTAAGTAACAGATTCAAAGAATCAAAACACG

mRNA sequence

ATTATAAGAATATTTGATGTAAAGATGTTGTTTGTGAGTTTGAAAGTAGTACCACGTGGCAAAATCTACGTGGACAAAGGGAGGAGAAGTAAGATACAGCAGCTGCAGGGAAACACAACTCATAATCCGTTTCCAGATTATGGTGTGCGGTCCGTCACATTATCCAATTGGAAAAAGGCACTAAAACTAAAACAATGCTGGGCTGAATTGCAGCTTCGTGAAAATGGCTCTTCTCAACGCTTCATTATGTTGTTCCAATTCCAGGTTTCCTTCCCGACTTCACCTTCCTCTTCCTCCCTCCATTTCCGATCATTCTACGCCTCAGGTAAACTCCCCCCCTCCATTTCCCATCCCAATTTCTTCTCCTTTCTCCTCAAATCCTATTATTTTATCCACAATGTGAAGGTATTAAACCAACAACTGCAAGCTACGCGGAATTTGGTCCTTTCCGTCGGAGAATCCGCCTCAAAAGCAACCTTCCTCGCTTTCCTTTCCGCCTCTGTCTTCCTCGCCGATCCTGCCCTAGCTTTTAAGGGCGGAGGTCCTTATGGCGCTGGGGTCACTAGAGGTCAGGATCTCTCTGGGAAAGATTTCAGTGGGAAGACGTTAATCAAGCAAGACTTCAAAACGTCTATTTTACGGCAAGCTAATTTTAAAGGTGCGAAGTTATTAGGTGCTAGCTTCTTCGATGCTGATTTAACAGGGGCGGATCTTTCAGATGCTGATCTCAGAGGTGCAGACTTTTCTTTGGCCAATGTTACCAAGGCAAACTTAAGCAATGCCAACTTAGAGGGTGCGCTTGCCACAGGAAATACTTCTTTCCGTGGATCAACAATAAACGGAGCTGACTTCACTGACGTGCCTTTGAGAGAGGATCAGCGGGAATACCTTTGCAAAGTTGCAGATGGGGTGAACCCAACAACTGGAAATGCAACCCGGGAGACCTTGCTCTGTGATTGAGACTCGAATTATACGGCAAGCCATTGAGGTACAAGAATCGTACAGATCAACCTATAAATGTATAAAGTTTTTAATAACCATATCAGTATCCAATCCAATGAGTTCAATTTTGTCAATCATCTATTAATGTCTCCTTATACCATGTTTTCTATCATGAGGTTTGTCGACATCATAAAGCTTAACGTAAGTAACAGATTCAAAGAATCAAAACACG

Coding sequence (CDS)

ATTATAAGAATATTTGATGTAAAGATGTTGTTTGTGAGTTTGAAAGTAGTACCACGTGGCAAAATCTACGTGGACAAAGGGAGGAGAAGTAAGATACAGCAGCTGCAGGGAAACACAACTCATAATCCGTTTCCAGATTATGGTGTGCGGTCCGTCACATTATCCAATTGGAAAAAGGCACTAAAACTAAAACAATGCTGGGCTGAATTGCAGCTTCGTGAAAATGGCTCTTCTCAACGCTTCATTATGTTGTTCCAATTCCAGGTTTCCTTCCCGACTTCACCTTCCTCTTCCTCCCTCCATTTCCGATCATTCTACGCCTCAGGTAAACTCCCCCCCTCCATTTCCCATCCCAATTTCTTCTCCTTTCTCCTCAAATCCTATTATTTTATCCACAATGTGAAGGTATTAAACCAACAACTGCAAGCTACGCGGAATTTGGTCCTTTCCGTCGGAGAATCCGCCTCAAAAGCAACCTTCCTCGCTTTCCTTTCCGCCTCTGTCTTCCTCGCCGATCCTGCCCTAGCTTTTAAGGGCGGAGGTCCTTATGGCGCTGGGGTCACTAGAGGTCAGGATCTCTCTGGGAAAGATTTCAGTGGGAAGACGTTAATCAAGCAAGACTTCAAAACGTCTATTTTACGGCAAGCTAATTTTAAAGGTGCGAAGTTATTAGGTGCTAGCTTCTTCGATGCTGATTTAACAGGGGCGGATCTTTCAGATGCTGATCTCAGAGGTGCAGACTTTTCTTTGGCCAATGTTACCAAGGCAAACTTAAGCAATGCCAACTTAGAGGGTGCGCTTGCCACAGGAAATACTTCTTTCCGTGGATCAACAATAAACGGAGCTGACTTCACTGACGTGCCTTTGAGAGAGGATCAGCGGGAATACCTTTGCAAAGTTGCAGATGGGGTGAACCCAACAACTGGAAATGCAACCCGGGAGACCTTGCTCTGTGATTGA

Protein sequence

IIRIFDVKMLFVSLKVVPRGKIYVDKGRRSKIQQLQGNTTHNPFPDYGVRSVTLSNWKKALKLKQCWAELQLRENGSSQRFIMLFQFQVSFPTSPSSSSLHFRSFYASGKLPPSISHPNFFSFLLKSYYFIHNVKVLNQQLQATRNLVLSVGESASKATFLAFLSASVFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD

Homology

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BLAST of CcUC11G215130 vs. NCBI nr
Match: XP_038883977.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 346.3 bits (887), Expect = 2.8e-91
Identity = 179/187 (95.72%), Postives = 185/187 (98.93%), Query Frame = 0


Query: 133 NVKVLNQQLQATRNLVLSVGESASKATFLAFLSASVFLADPALAFKGGGPYGAGVTRGQD 192
           N+KV NQQL+ATR+LVLS+GESASKA+FLAFLSAS+FLADPALAFKGGGPYGAGVTRGQD
Sbjct: 51  NMKVFNQQLEATRHLVLSLGESASKASFLAFLSASLFLADPALAFKGGGPYGAGVTRGQD 110

Query: 193 LSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLAN 252
           LSGKDFS KTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLAN
Sbjct: 111 LSGKDFSWKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLAN 170

Query: 253 VTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNAT 312
           VTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNAT
Sbjct: 171 VTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNAT 230

Query: 313 RETLLCD 320
           RETLLCD
Sbjct: 231 RETLLCD 237

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BLAST of CcUC11G215130 vs. NCBI nr
Match: XP_022133545.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 340.5 bits (872), Expect = 1.6e-89
Identity = 183/210 (87.14%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 111 LPPSIS-HPNFFSFLLKSYYFIHNVKVLNQQLQATRNLVLSVGESASKATFLAFLSASVF 170
           LPPSIS HP                 VL QQL+A+RNL+LSVGESASKATFLA LSAS+F
Sbjct: 23  LPPSISAHP--------------TPPVLKQQLEASRNLILSVGESASKATFLALLSASLF 82

Query: 171 LADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFF 230
           LADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFF
Sbjct: 83  LADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFF 142

Query: 231 DADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPL 290
           DADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTI GADFTDVPL
Sbjct: 143 DADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTIEGADFTDVPL 202

Query: 291 REDQREYLCKVADGVNPTTGNATRETLLCD 320
           REDQREYLCKVADGVNPTTGNATR+TLLC+
Sbjct: 203 REDQREYLCKVADGVNPTTGNATRDTLLCN 218

[Close]

BLAST of CcUC11G215130 vs. NCBI nr
Match: XP_023552471.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336.3 bits (861), Expect = 2.9e-88
Identity = 178/209 (85.17%), Postives = 188/209 (89.95%), Query Frame = 0


Query: 111 LPPSISHPNFFSFLLKSYYFIHNVKVLNQQLQATRNLVLSVGESASKATFLAFLSASVFL 170
           LPPSIS              + N +V+  Q++ATRN VLSVGESASKA+FLA +SAS+FL
Sbjct: 23  LPPSIS-------------ALSNPQVMKHQVEATRNFVLSVGESASKASFLALISASLFL 82

Query: 171 ADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 230
           ADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD
Sbjct: 83  ADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 142

Query: 231 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLR 290
           ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGS INGADFTDVPLR
Sbjct: 143 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSIINGADFTDVPLR 202

Query: 291 EDQREYLCKVADGVNPTTGNATRETLLCD 320
           EDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 203 EDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of CcUC11G215130 vs. NCBI nr
Match: XP_022991097.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 335.5 bits (859), Expect = 5.0e-88
Identity = 179/209 (85.65%), Postives = 188/209 (89.95%), Query Frame = 0


Query: 111 LPPSISHPNFFSFLLKSYYFIHNVKVLNQQLQATRNLVLSVGESASKATFLAFLSASVFL 170
           LPPSI  P F            N +V+  Q++ATRN VLSVGESASKA+FLA +SAS+FL
Sbjct: 23  LPPSI--PAF-----------SNPRVMKHQVEATRNFVLSVGESASKASFLALISASLFL 82

Query: 171 ADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 230
           ADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD
Sbjct: 83  ADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 142

Query: 231 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLR 290
           ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGS INGADFTDVPLR
Sbjct: 143 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSIINGADFTDVPLR 202

Query: 291 EDQREYLCKVADGVNPTTGNATRETLLCD 320
           EDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 203 EDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of CcUC11G215130 vs. NCBI nr
Match: XP_022955559.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 335.1 bits (858), Expect = 6.6e-88
Identity = 177/209 (84.69%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 111 LPPSISHPNFFSFLLKSYYFIHNVKVLNQQLQATRNLVLSVGESASKATFLAFLSASVFL 170
           LPPS+S                N +V+  Q++ATRN VLSVGESASKA+FLA +SAS+FL
Sbjct: 23  LPPSVS-------------AFSNPQVMKHQVEATRNFVLSVGESASKASFLALISASLFL 82

Query: 171 ADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 230
           ADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD
Sbjct: 83  ADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 142

Query: 231 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLR 290
           ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGS INGADFTDVPLR
Sbjct: 143 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSIINGADFTDVPLR 202

Query: 291 EDQREYLCKVADGVNPTTGNATRETLLCD 320
           EDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 203 EDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of CcUC11G215130 vs. ExPASy Swiss-Prot
Match: O22160 (Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g44920 PE=1 SV=2)

HSP 1 Score: 284.6 bits (727), Expect = 1.3e-75
Identity = 144/175 (82.29%), Postives = 158/175 (90.29%), Query Frame = 0


Query: 145 RNLVLSVGESASKATFLAFLSASVFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLI 204
           R++V S+GE  SK +  A +SAS+F  DPALAFKGGGPYG GVTRGQDLSGKDFSG+TLI
Sbjct: 50  RSVVWSLGEEVSKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQTLI 109

Query: 205 KQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNANLE 264
           +QDFKTSILRQANFKGAKLLGASFFDADLTGADLS+ADLRGADFSLANVTK NL+NANLE
Sbjct: 110 RQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNANLE 169

Query: 265 GALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 320
           GA  TGNTSF+GS I GADFTDVPLR+DQR YLCKVADGVN TTGNATR+TLLC+
Sbjct: 170 GATVTGNTSFKGSNITGADFTDVPLRDDQRVYLCKVADGVNATTGNATRDTLLCN 224

[Close]

BLAST of CcUC11G215130 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.0e-14
Identity = 55/126 (43.65%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 193 LSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLAN 252
           L G+DFSGK+L    F  + L  +NF  A L GA F  + L GADL  ADL      L +
Sbjct: 54  LIGEDFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTS 113

Query: 253 VTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNAT 312
              A+L+NA L  A+    T F  + I GADF+   L   + + LC  ADGVNP TG +T
Sbjct: 114 FKGADLTNAVLTEAIMM-RTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGVST 173

Query: 313 RETLLC 319
           RE+L C
Sbjct: 174 RESLGC 178

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BLAST of CcUC11G215130 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.2e-09
Identity = 60/199 (30.15%), Postives = 94/199 (47.24%), Query Frame = 0


Query: 138 NQQLQATRNLVLSVGESASKATFLAFLSASVFLADPALAFKGGGPYGAGV------TRGQ 197
           N +++ + N       SA   T+   LSA+  +A   +A   G P  A +      TRG+
Sbjct: 45  NLEIKDSSNTREGCCSSAESNTWKRILSAA--MAAAVIASSSGVPAMAELNRFEADTRGE 104

Query: 198 ------------DLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLS 257
                       DLS    S +   + +F ++ +R+++F G+   GA    A    A+ S
Sbjct: 105 FGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFS 164

Query: 258 DADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCK 317
            ADL         + +ANL+NA L  ++ T  +   G+ I GADF+D  +   Q++ LCK
Sbjct: 165 GADLSDTLMDRMVLNEANLTNAVLVRSVLT-RSDLGGAKIEGADFSDAVIDLLQKQALCK 224

Query: 318 VADGVNPTTGNATRETLLC 319
            A G NP TG  TR++L C
Sbjct: 225 YATGTNPLTGVDTRKSLGC 240

[Close]

BLAST of CcUC11G215130 vs. ExPASy Swiss-Prot
Match: Q9SE95 (FH protein interacting protein FIP2 OS=Arabidopsis thaliana OX=3702 GN=FIP2 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.5e-07
Identity = 42/111 (37.84%), Postives = 53/111 (47.75%), Query Frame = 0


Query: 189 RGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADF 248
           R  D  G  F    L + +F ++ LR A   G  L  A+  DA L G     ADLR A  
Sbjct: 174 RNADAEGSIFHNAILRECEFTSANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHL 233

Query: 249 SLANVTKANLSNANLEGALATG----NTSFRGSTINGADFTDVPLREDQRE 296
             A++T ANL  ANLEGA   G    N +F+G+ +  A    V LRE   E
Sbjct: 234 QNADLTNANLEGANLEGANLKGAKLSNANFKGANLQRAYLRHVNLREAHME 284

[Close]

BLAST of CcUC11G215130 vs. ExPASy Swiss-Prot
Match: P73709 (Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1819 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.9e-06
Identity = 43/116 (37.07%), Postives = 63/116 (54.31%), Query Frame = 0


Query: 190 GQDLSGKDFSGKTL---------IKQDFK-------TSILRQANFKGAKLLGASFFDADL 249
           G DL G D SG TL         ++Q+ K        +IL +A+ +GA + G     ADL
Sbjct: 114 GADLRGADLSGATLTGACLRGANMRQEKKGYYTNLQAAILGRADLQGANMKGVDLSRADL 173

Query: 250 TGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPL 290
           + A+L +A+LR  D     + KA+LS ANL+GAL T + +  G+ +NGAD  +  L
Sbjct: 174 SYANLKEANLRDVD-----LRKADLSYANLKGALLT-DANLSGAKLNGADLQNANL 223

[Close]

BLAST of CcUC11G215130 vs. ExPASy TrEMBL
Match: A0A6J1BVJ8 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006104 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 7.6e-90
Identity = 183/210 (87.14%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 111 LPPSIS-HPNFFSFLLKSYYFIHNVKVLNQQLQATRNLVLSVGESASKATFLAFLSASVF 170
           LPPSIS HP                 VL QQL+A+RNL+LSVGESASKATFLA LSAS+F
Sbjct: 23  LPPSISAHP--------------TPPVLKQQLEASRNLILSVGESASKATFLALLSASLF 82

Query: 171 LADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFF 230
           LADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFF
Sbjct: 83  LADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFF 142

Query: 231 DADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPL 290
           DADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTI GADFTDVPL
Sbjct: 143 DADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTIEGADFTDVPL 202

Query: 291 REDQREYLCKVADGVNPTTGNATRETLLCD 320
           REDQREYLCKVADGVNPTTGNATR+TLLC+
Sbjct: 203 REDQREYLCKVADGVNPTTGNATRDTLLCN 218

[Close]

BLAST of CcUC11G215130 vs. ExPASy TrEMBL
Match: A0A6J1JKT4 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487791 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 2.4e-88
Identity = 179/209 (85.65%), Postives = 188/209 (89.95%), Query Frame = 0


Query: 111 LPPSISHPNFFSFLLKSYYFIHNVKVLNQQLQATRNLVLSVGESASKATFLAFLSASVFL 170
           LPPSI  P F            N +V+  Q++ATRN VLSVGESASKA+FLA +SAS+FL
Sbjct: 23  LPPSI--PAF-----------SNPRVMKHQVEATRNFVLSVGESASKASFLALISASLFL 82

Query: 171 ADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 230
           ADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD
Sbjct: 83  ADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 142

Query: 231 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLR 290
           ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGS INGADFTDVPLR
Sbjct: 143 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSIINGADFTDVPLR 202

Query: 291 EDQREYLCKVADGVNPTTGNATRETLLCD 320
           EDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 203 EDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of CcUC11G215130 vs. ExPASy TrEMBL
Match: A0A6J1GWM1 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457530 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 3.2e-88
Identity = 177/209 (84.69%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 111 LPPSISHPNFFSFLLKSYYFIHNVKVLNQQLQATRNLVLSVGESASKATFLAFLSASVFL 170
           LPPS+S                N +V+  Q++ATRN VLSVGESASKA+FLA +SAS+FL
Sbjct: 23  LPPSVS-------------AFSNPQVMKHQVEATRNFVLSVGESASKASFLALISASLFL 82

Query: 171 ADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 230
           ADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD
Sbjct: 83  ADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 142

Query: 231 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLR 290
           ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGS INGADFTDVPLR
Sbjct: 143 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSIINGADFTDVPLR 202

Query: 291 EDQREYLCKVADGVNPTTGNATRETLLCD 320
           EDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 203 EDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of CcUC11G215130 vs. ExPASy TrEMBL
Match: A0A6J1JPS6 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487791 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 7.1e-88
Identity = 178/209 (85.17%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 111 LPPSISHPNFFSFLLKSYYFIHNVKVLNQQLQATRNLVLSVGESASKATFLAFLSASVFL 170
           LPPSI  P F            N + +  Q++ATRN VLSVGESASKA+FLA +SAS+FL
Sbjct: 23  LPPSI--PAF-----------SNPRAMKHQVEATRNFVLSVGESASKASFLALISASLFL 82

Query: 171 ADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 230
           ADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD
Sbjct: 83  ADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 142

Query: 231 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLR 290
           ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGS INGADFTDVPLR
Sbjct: 143 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSIINGADFTDVPLR 202

Query: 291 EDQREYLCKVADGVNPTTGNATRETLLCD 320
           EDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 203 EDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of CcUC11G215130 vs. ExPASy TrEMBL
Match: A0A6J1GU31 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457530 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 9.3e-88
Identity = 176/209 (84.21%), Postives = 186/209 (89.00%), Query Frame = 0


Query: 111 LPPSISHPNFFSFLLKSYYFIHNVKVLNQQLQATRNLVLSVGESASKATFLAFLSASVFL 170
           LPPS+S                N + +  Q++ATRN VLSVGESASKA+FLA +SAS+FL
Sbjct: 23  LPPSVS-------------AFSNPQTMKHQVEATRNFVLSVGESASKASFLALISASLFL 82

Query: 171 ADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 230
           ADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD
Sbjct: 83  ADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFD 142

Query: 231 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLR 290
           ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGS INGADFTDVPLR
Sbjct: 143 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSIINGADFTDVPLR 202

Query: 291 EDQREYLCKVADGVNPTTGNATRETLLCD 320
           EDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 203 EDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of CcUC11G215130 vs. TAIR 10
Match: AT2G44920.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 284.6 bits (727), Expect = 9.5e-77
Identity = 144/175 (82.29%), Postives = 158/175 (90.29%), Query Frame = 0


Query: 145 RNLVLSVGESASKATFLAFLSASVFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLI 204
           R++V S+GE  SK +  A +SAS+F  DPALAFKGGGPYG GVTRGQDLSGKDFSG+TLI
Sbjct: 50  RSVVWSLGEEVSKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQTLI 109

Query: 205 KQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNANLE 264
           +QDFKTSILRQANFKGAKLLGASFFDADLTGADLS+ADLRGADFSLANVTK NL+NANLE
Sbjct: 110 RQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNANLE 169

Query: 265 GALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 320
           GA  TGNTSF+GS I GADFTDVPLR+DQR YLCKVADGVN TTGNATR+TLLC+
Sbjct: 170 GATVTGNTSFKGSNITGADFTDVPLRDDQRVYLCKVADGVNATTGNATRDTLLCN 224

[Close]

BLAST of CcUC11G215130 vs. TAIR 10
Match: AT2G44920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 216.5 bits (550), Expect = 3.2e-56
Identity = 112/138 (81.16%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 145 RNLVLSVGESASKATFLAFLSASVFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLI 204
           R++V S+GE  SK +  A +SAS+F  DPALAFKGGGPYG GVTRGQDLSGKDFSG+TLI
Sbjct: 50  RSVVWSLGEEVSKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQTLI 109

Query: 205 KQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNANLE 264
           +QDFKTSILRQANFKGAKLLGASFFDADLTGADLS+ADLRGADFSLANVTK NL+NANLE
Sbjct: 110 RQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNANLE 169

Query: 265 GALATGNTSFRGSTINGA 283
           GA  TGNTSF+GS I GA
Sbjct: 170 GATVTGNTSFKGSNITGA 187

[Close]

BLAST of CcUC11G215130 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-10
Identity = 47/141 (33.33%), Postives = 72/141 (51.06%), Query Frame = 0


Query: 181 GPYGAGVTR---GQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGAD 240
           G +G G        DLS    S +   + +F ++ +R+++F G+   GA    A    A+
Sbjct: 27  GEFGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKAN 86

Query: 241 LSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYL 300
            S ADL         + +ANL+NA L  ++ T  +   G+ I GADF+D  +   Q++ L
Sbjct: 87  FSGADLSDTLMDRMVLNEANLTNAVLVRSVLT-RSDLGGAKIEGADFSDAVIDLLQKQAL 146

Query: 301 CKVADGVNPTTGNATRETLLC 319
           CK A G NP TG  TR++L C
Sbjct: 147 CKYATGTNPLTGVDTRKSLGC 166

[Close]

BLAST of CcUC11G215130 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 62.8 bits (151), Expect = 5.9e-10
Identity = 60/199 (30.15%), Postives = 94/199 (47.24%), Query Frame = 0


Query: 138 NQQLQATRNLVLSVGESASKATFLAFLSASVFLADPALAFKGGGPYGAGV------TRGQ 197
           N +++ + N       SA   T+   LSA+  +A   +A   G P  A +      TRG+
Sbjct: 45  NLEIKDSSNTREGCCSSAESNTWKRILSAA--MAAAVIASSSGVPAMAELNRFEADTRGE 104

Query: 198 ------------DLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLS 257
                       DLS    S +   + +F ++ +R+++F G+   GA    A    A+ S
Sbjct: 105 FGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFS 164

Query: 258 DADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCK 317
            ADL         + +ANL+NA L  ++ T  +   G+ I GADF+D  +   Q++ LCK
Sbjct: 165 GADLSDTLMDRMVLNEANLTNAVLVRSVLT-RSDLGGAKIEGADFSDAVIDLLQKQALCK 224

Query: 318 VADGVNPTTGNATRETLLC 319
            A G NP TG  TR++L C
Sbjct: 225 YATGTNPLTGVDTRKSLGC 240

[Close]

BLAST of CcUC11G215130 vs. TAIR 10
Match: AT5G55000.2 (potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein )

HSP 1 Score: 57.0 bits (136), Expect = 3.2e-08
Identity = 42/111 (37.84%), Postives = 53/111 (47.75%), Query Frame = 0


Query: 189 RGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADF 248
           R  D  G  F    L + +F ++ LR A   G  L  A+  DA L G     ADLR A  
Sbjct: 174 RNADAEGSIFHNAILRECEFTSANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHL 233

Query: 249 SLANVTKANLSNANLEGALATG----NTSFRGSTINGADFTDVPLREDQRE 296
             A++T ANL  ANLEGA   G    N +F+G+ +  A    V LRE   E
Sbjct: 234 QNADLTNANLEGANLEGANLKGAKLSNANFKGANLQRAYLRHVNLREAHME 284

The following BLAST results are available for this feature:

BLAST of CcUC11G215130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883977.1	2.8e-91	95.72	thylakoid lumenal 15 kDa protein 1, chloroplastic [Benincasa hispida]	[more]
XP_022133545.1	1.6e-89	87.14	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 [Momordica charanti...	[more]
XP_023552471.1	2.9e-88	85.17	thylakoid lumenal 15 kDa protein 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022991097.1	5.0e-88	85.65	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 [Cucurbita maxima]	[more]
XP_022955559.1	6.6e-88	84.69	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 [Cucurbita moschata...	[more]

BLAST of CcUC11G215130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22160	1.3e-75	82.29	Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
B1WVN5	5.0e-14	43.65	Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ...	[more]
Q8H1Q1	8.2e-09	30.15	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SE95	4.5e-07	37.84	FH protein interacting protein FIP2 OS=Arabidopsis thaliana OX=3702 GN=FIP2 PE=1...	[more]
P73709	2.9e-06	37.07	Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]

BLAST of CcUC11G215130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BVJ8	7.6e-90	87.14	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Momordica charan...	[more]
A0A6J1JKT4	2.4e-88	85.65	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita maxima...	[more]
A0A6J1GWM1	3.2e-88	84.69	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita moscha...	[more]
A0A6J1JPS6	7.1e-88	85.17	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Cucurbita maxima...	[more]
A0A6J1GU31	9.3e-88	84.21	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Cucurbita moscha...	[more]

BLAST of CcUC11G215130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44920.2	9.5e-77	82.29	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G44920.1	3.2e-56	81.16	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12250.2	2.6e-10	33.33	Pentapeptide repeat-containing protein	[more]
AT1G12250.1	5.9e-10	30.15	Pentapeptide repeat-containing protein	[more]
AT5G55000.2	3.2e-08	37.84	potassium channel tetramerisation domain-containing protein / pentapeptide repea...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.160.20.80		coord: 176..319 e-value: 1.4E-46 score: 159.3
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 188..290
IPR001646	Pentapeptide repeat	PFAM	PF00805	Pentapeptide	coord: 211..249 e-value: 2.0E-12 score: 46.5
IPR044213	Thylakoid lumenal 15kDa protein 1-like	PANTHER	PTHR47200	THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC	coord: 125..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G215130.1	CcUC11G215130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009534	chloroplast thylakoid