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CcUC11G214240 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAACTCCAAACTATGACCAAATCTCTCAAAAATCCTTCCAAACCAAACATGAAGATAGATTATTCACTAGGGCTCTATCCAAAGAGCTCAATTCCACCATCAACTCCTCTTTTAGAGTCTATTACGGCGGAGCCACCGGTGCAATTCCGTTCCGATGGGAGTCCCGACCAGGAACTCCAAAGCATACTTTTTCAGAAACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCACTTTGCATTCTACTTCCAAGGCCTCTTCCAAACCAACCCTTTTGAGCTCCATTTTTCCTCGGCTCACGCCAAGGAAATCTCGAACCTCCCCGTCTTTCTCCTCTTCCTCGGGCTCCTCCTCCTCCTCCTCTTCTTTAGCATCATGGCCATCCTCTCGCTCATCGTCCTCCTCGTCTCCCTCGGCTTTCGTTAGACCTAAATTCTTCAAATGTCGTCGTCATTTCTCAAATTCTCCAAGCTTACCATTCGAGCATAGCTTCGACGATAACAACGACGTAGACGAGGTGGTGGCTGGGAGTCCCAATTCTCCTACATCAACTTTGTGCTTTGGTGGTTCTTCTTCAAGTAGAGCTTCATTGTTTGGAGGTTGTTACCAGTTAGTGAATGTGAAGAATGCTTTGTTGTCCATTGTTGGTCATGGATCTGCAAGCAGAGGTACTCTTAATAATTAG ATGCAAACTCCAAACTATGACCAAATCTCTCAAAAATCCTTCCAAACCAAACATGAAGATAGATTATTCACTAGGGCTCTATCCAAAGAGCTCAATTCCACCATCAACTCCTCTTTTAGAGTCTATTACGGCGGAGCCACCGGTGCAATTCCGTTCCGATGGGAGTCCCGACCAGGAACTCCAAAGCATACTTTTTCAGAAACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCACTTTGCATTCTACTTCCAAGGCCTCTTCCAAACCAACCCTTTTGAGCTCCATTTTTCCTCGGCTCACGCCAAGGAAATCTCGAACCTCCCCGTCTTTCTCCTCTTCCTCGGGCTCCTCCTCCTCCTCCTCTTCTTTAGCATCATGGCCATCCTCTCGCTCATCGTCCTCCTCGTCTCCCTCGGCTTTCGTTAGACCTAAATTCTTCAAATGTCGTCGTCATTTCTCAAATTCTCCAAGCTTACCATTCGAGCATAGCTTCGACGATAACAACGACGTAGACGAGGTGGTGGCTGGGAGTCCCAATTCTCCTACATCAACTTTGTGCTTTGGTGGTTCTTCTTCAAGTAGAGCTTCATTGTTTGGAGGTTGTTACCAGTTAGTGAATGTGAAGAATGCTTTGTTGTCCATTGTTGGTCATGGATCTGCAAGCAGAGGTACTCTTAATAATTAG ATGCAAACTCCAAACTATGACCAAATCTCTCAAAAATCCTTCCAAACCAAACATGAAGATAGATTATTCACTAGGGCTCTATCCAAAGAGCTCAATTCCACCATCAACTCCTCTTTTAGAGTCTATTACGGCGGAGCCACCGGTGCAATTCCGTTCCGATGGGAGTCCCGACCAGGAACTCCAAAGCATACTTTTTCAGAAACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCACTTTGCATTCTACTTCCAAGGCCTCTTCCAAACCAACCCTTTTGAGCTCCATTTTTCCTCGGCTCACGCCAAGGAAATCTCGAACCTCCCCGTCTTTCTCCTCTTCCTCGGGCTCCTCCTCCTCCTCCTCTTCTTTAGCATCATGGCCATCCTCTCGCTCATCGTCCTCCTCGTCTCCCTCGGCTTTCGTTAGACCTAAATTCTTCAAATGTCGTCGTCATTTCTCAAATTCTCCAAGCTTACCATTCGAGCATAGCTTCGACGATAACAACGACGTAGACGAGGTGGTGGCTGGGAGTCCCAATTCTCCTACATCAACTTTGTGCTTTGGTGGTTCTTCTTCAAGTAGAGCTTCATTGTTTGGAGGTTGTTACCAGTTAGTGAATGTGAAGAATGCTTTGTTGTCCATTGTTGGTCATGGATCTGCAAGCAGAGGTACTCTTAATAATTAG MQTPNYDQISQKSFQTKHEDRLFTRALSKELNSTINSSFRVYYGGATGAIPFRWESRPGTPKHTFSETSIPPLTPPPSYYSTLHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSGSSSSSSSLASWPSSRSSSSSSPSAFVRPKFFKCRRHFSNSPSLPFEHSFDDNNDVDEVVAGSPNSPTSTLCFGGSSSSRASLFGGCYQLVNVKNALLSIVGHGSASRGTLNN Homology
BLAST of CcUC11G214240 vs. NCBI nr
Match: XP_038885974.1 (putative protein TPRXL [Benincasa hispida]) HSP 1 Score: 367.1 bits (941), Expect = 1.1e-97 Identity = 209/233 (89.70%), Postives = 214/233 (91.85%), Query Frame = 0
BLAST of CcUC11G214240 vs. NCBI nr
Match: XP_016901982.1 (PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0052017.1 putative serine-rich protein [Cucumis melo var. makuwa]) HSP 1 Score: 367.1 bits (941), Expect = 1.1e-97 Identity = 207/234 (88.46%), Postives = 214/234 (91.45%), Query Frame = 0
BLAST of CcUC11G214240 vs. NCBI nr
Match: XP_011656432.1 (putative protein TPRXL [Cucumis sativus]) HSP 1 Score: 365.2 bits (936), Expect = 4.3e-97 Identity = 205/233 (87.98%), Postives = 215/233 (92.27%), Query Frame = 0
BLAST of CcUC11G214240 vs. NCBI nr
Match: KAE8646577.1 (hypothetical protein Csa_005771 [Cucumis sativus]) HSP 1 Score: 359.4 bits (921), Expect = 2.4e-95 Identity = 202/229 (88.21%), Postives = 211/229 (92.14%), Query Frame = 0
BLAST of CcUC11G214240 vs. NCBI nr
Match: XP_022134140.1 (putative protein TPRXL [Momordica charantia]) HSP 1 Score: 285.0 bits (728), Expect = 5.6e-73 Identity = 171/234 (73.08%), Postives = 189/234 (80.77%), Query Frame = 0
BLAST of CcUC11G214240 vs. ExPASy TrEMBL
Match: A0A5A7UC51 (Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005080 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 5.5e-98 Identity = 207/234 (88.46%), Postives = 214/234 (91.45%), Query Frame = 0
BLAST of CcUC11G214240 vs. ExPASy TrEMBL
Match: A0A1S4E178 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 5.5e-98 Identity = 207/234 (88.46%), Postives = 214/234 (91.45%), Query Frame = 0
BLAST of CcUC11G214240 vs. ExPASy TrEMBL
Match: A0A0A0K7T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 2.1e-97 Identity = 205/233 (87.98%), Postives = 215/233 (92.27%), Query Frame = 0
BLAST of CcUC11G214240 vs. ExPASy TrEMBL
Match: A0A6J1BX95 (Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111006479 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 2.7e-73 Identity = 171/234 (73.08%), Postives = 189/234 (80.77%), Query Frame = 0
BLAST of CcUC11G214240 vs. ExPASy TrEMBL
Match: A0A6J1K022 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=LOC111489820 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 9.1e-69 Identity = 160/201 (79.60%), Postives = 168/201 (83.58%), Query Frame = 0
BLAST of CcUC11G214240 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). ) HSP 1 Score: 90.1 bits (222), Expect = 2.5e-18 Identity = 84/199 (42.21%), Postives = 115/199 (57.79%), Query Frame = 0
BLAST of CcUC11G214240 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 6.5e-11 Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of CcUC11G214240 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). ) HSP 1 Score: 59.3 bits (142), Expect = 4.7e-09 Identity = 73/169 (43.20%), Postives = 88/169 (52.07%), Query Frame = 0
BLAST of CcUC11G214240 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 4.9e-06 Identity = 49/113 (43.36%), Postives = 69/113 (61.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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