CcUC11G214210 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC11G214210
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr11: 6307035 .. 6308128 (+)
RNA-Seq ExpressionCcUC11G214210
SyntenyCcUC11G214210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTGCATCAGACATGAAAGCAAAATATTGACCCTCGAAATCCCCATTTTCATCAATAAAACCGGCAAATCGTGCCATTGAATAAAGGGTTCCAGTGGTATCCAAAATATCCACGTATAAGAAAGTGATCATAGCTTCCCAAAAGTAAGGTTTCCCCAAATCCTTAAAGCTAAGTGCTCCAGCTGTGCTTTTAATTATGTGTATATCCACAACTTTCTTAAAGTACTTATACGCCGCCTCCCCTGACGCCGTTTCTGAAAACGCCGTCACACTCGTTTTTGGAATCCATGAAACAGCCGTTACGAATATGATCCCGTAAATCATAGCTCCTTTTATGTTTTTCACCAAACAATATGCAATTACTACGAATCCCACTATTCCCAGCCACATCCTTGGGCTTTCCATTCGCCCATTCAAACAGAGGATTCCTTCTGAAGCTGTTCCTCCGGCCATTACACTCACCGTTCCGTTCAGGTAACTCACCACCGGCGCTACTGACACTCGAGAGGATTCTGGGCAGCCTCCAATTGTTACTAATGTCGATGGGTTGAAGGCGATTAAACCAATTCCTTGGCTGCTCTGTAATCCGATGAAGGCTAAAAACAGACCAATTCCGGCAGAGGAACTGATTCGGACTGGCTTTGGGATTAATTTCGCTAACTTCGCACGAAACCCAATTGCGGAAATTAGTAAAAATATTAACCCCTCCATTAGAACGGCGGTTAAGGCGCTCTGGTAAGATATATTACCGGACCCATGGAATCCGACGACGGTGTAAGCGAAATAAGCGTTAGTTCCCATTCCTGGTGCTAAAGCCAGTGGAAGGTTTGCAAAAACGCCCATTATAACGCAGCCAATTAGCGACGAAGCAATCGTCGCTACAATCAAGTCTCTACGGACCTGATCGAGGCAATCGGCGTAGCCGGTATTGACCGGGTCGAACATGCAGGACTGGTCGGGTTGGATGAGGCGGAGATCCGGCCCGGTACAGTTGGGGATTGAAATTGAAGGGTCGGAACAGAGAGGGATACAATCGGATTGAGAACAGGTGGCGCCGGAGTCGGCAAGGATGGAGGCGTTGACGGCTAA

mRNA sequence

ATGGCGTACTTATACGCCGCCTCCCCTGACGCCGTTTCTGAAAACGCCGTCACACTCGTTTTTGGAATCCATGAAACAGCCGTTACGAATATGATCCCCCACATCCTTGGGCTTTCCATTCGCCCATTCAAACAGAGGATTCCTTCTGAAGCTGTTCCTCCGGCCATTACACTCACCGTTCCGTTCAGCCAATTAGCGACGAAGCAATCGTCGCTACAATCAAGTCTCTACGGACCTGATCGAGGCAATCGGCGTAGCCGGGTCGGAACAGAGAGGGATACAATCGGATTGAGAACAGGTGGCGCCGGAGTCGGCAAGGATGGAGGCGTTGACGGCTAA

Coding sequence (CDS)

ATGGCGTACTTATACGCCGCCTCCCCTGACGCCGTTTCTGAAAACGCCGTCACACTCGTTTTTGGAATCCATGAAACAGCCGTTACGAATATGATCCCCCACATCCTTGGGCTTTCCATTCGCCCATTCAAACAGAGGATTCCTTCTGAAGCTGTTCCTCCGGCCATTACACTCACCGTTCCGTTCAGCCAATTAGCGACGAAGCAATCGTCGCTACAATCAAGTCTCTACGGACCTGATCGAGGCAATCGGCGTAGCCGGGTCGGAACAGAGAGGGATACAATCGGATTGAGAACAGGTGGCGCCGGAGTCGGCAAGGATGGAGGCGTTGACGGCTAA

Protein sequence

MAYLYAASPDAVSENAVTLVFGIHETAVTNMIPHILGLSIRPFKQRIPSEAVPPAITLTVPFSQLATKQSSLQSSLYGPDRGNRRSRVGTERDTIGLRTGGAGVGKDGGVDG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC11G214210.1CcUC11G214210.1mRNA