CcUC11G212870 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G212870
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	organ-specific protein P4-like
Location	CicolChr11: 4897567 .. 4899603 (-)
RNA-Seq Expression	CcUC11G212870
Synteny	CcUC11G212870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGACCCAGAAATATTTGTCTATAAAATGGAAAACCAACCATGGTTAAAACCCAAAAAAAAGAAAATAATATTGCTTCTGCCTTCATCTGTTGTGAGACAAACACATATGAAGCTTTCTGTTGCTTTCTTCCTTCTCCTAATTTCTCTTCTCCTGGTAAGTTCTTCATCTTCCCTTTTTTCCTTGAATTTTTTTTTTTAGATTTTTGTGAATATTTATACCATCATAAATCATTGGATCATATTTCTTACAATATACTTTTAATTTTTTTTTTTTTTTTATGTTTTCTATTTTTTAAATTTATGTTTTTTTTTTTTAAAAAAAAAAAACAAAAGGGGTTTCTTTTTTTTTTTTTTTTTCCTTAGTGATTTACTCAGAAACCTAAAAATAAATTATTTAGGCTTCATTGTCTAACGATTTTTTTTTTTTTTATGTTTTCTATTTTTTAAATTTATGTTTTTTTTTTTTAAAAAAAAAAAACAAAAGGGGTTTCTTTTTTTTTTTTTTTTTCCTTAGTGATTTACTCAGAAACCTAAAAATAAATTATTTAGGCTTCATTGTCTAACGATTTTTTTTTTTTTTATGTTTTCTATTTTTTAAATTTATGTTTTTCATTGTTAAAAAAAATTATGCTTGTCATATTATGATTTTTACATTTTTTAAGAAACTAGTTAAATTTTTAAAATTAATTCCGTTTTTGAAATTAGATTTTTTTAGTTTCCAAATTTTAATTTTTGAAAATATTGATAGTAAAAGTAGATGACAACATGTAGAAACAAATAGGTGGAAATATTGTTTATAGACTTAATTTTCAAAAATAAAAATTTAAGACACTGTTTGGTAACAATTCATTATTTTACTATTATTATTTTTTTAAATCAAGCATATTTTTTTTACATTTTTTACAATGATTTGCATATTTGTTAAGTACAATGGTTGAATTCTTAGTCAAATTCCAAAAACAAAAACAAGATTTTAAACGCTACTTTTTTTAGTTTTCAAAATTTGGCTTGATTTTTTAAATCATTAGTAAAAAGTAGACAACAGATGAAGAAATTTGGAGGTGGGATTAGTGTCTATAGACTTAATTTTCAAAAACAAAAATAAAAAACAAAATGGTTACTAAACGGGGCGTAAAATATCATTTGCTAACCATTTGGTTTTGGTTTTTAAAAATTATGTTTGTTTTTCAAGATTTGTTTCCTATGTTTTTCATCTTTTTCTATAACTAAACACTTGAATTCTTGTTTTAAAAAAAGAAAAAAGAAAAAAAAACTTTTAGACATGAGAGGGATCAATCCGAATACCTCAATTATATGGACAAATGCATTCTTTAACACCCTCTATTACACTCCCTATGCATTACCAAAAGAAGCTTAAAACAAAAAACAAGTTTTTAAAATTGTCCTTTTTTTTCTTTTAAAAACTTAGTTTGGTTTTTAAAATGCCGTTGAAAATATAAATAACAAACTGAAGAAAACAATGGATAAAAGTTACCAAACAAACCTAAATAATTAGGATCTATATCTTACAAATGTTTTTAAAAAGAAAAAACAAAAAAGAGCCTTTGTCTTCGTCGACAAAATATATAAACTAAGAGAAAACAAACATAATTAAAAATCAAATCGAAATGGTAACAAAAGGAGACGAAATAAATTATTATAATTTGATTTGTTTGGGGATAACAGTTTGGAGATGTAAGCCATGGAAGCAAGAAGGAAGAAGGAGAATACTGGAAAAAGATAATGAAAGATGAAGCAATTCCAGAGATGTTAAAAGAGCTTTTATTGGATAATGATAATTCAATGGTTGTGGACAACAACAACAACAACCAAAAGGAGCATTTTATGACCAATTTTGATCCTCATCCAAATGCTATAATTTACCATGCCCATTCCCATGCTCATACCTCCACTCATACCAAAATCAATCCCACTCTTCCCAATTTATCCCCATAAAATCTTCTTAATTTCCCACATATATATATATATATATTCCTAATTGTCAACTTCCTTATCTTTTCTGTAAATTAATATAT

mRNA sequence

TTGACCCAGAAATATTTGTCTATAAAATGGAAAACCAACCATGGTTAAAACCCAAAAAAAAGAAAATAATATTGCTTCTGCCTTCATCTGTTGTGAGACAAACACATATGAAGCTTTCTGTTGCTTTCTTCCTTCTCCTAATTTCTCTTCTCCTGTTTGGAGATGTAAGCCATGGAAGCAAGAAGGAAGAAGGAGAATACTGGAAAAAGATAATGAAAGATGAAGCAATTCCAGAGATGTTAAAAGAGCTTTTATTGGATAATGATAATTCAATGGTTGTGGACAACAACAACAACAACCAAAAGGAGCATTTTATGACCAATTTTGATCCTCATCCAAATGCTATAATTTACCATGCCCATTCCCATGCTCATACCTCCACTCATACCAAAATCAATCCCACTCTTCCCAATTTATCCCCATAAAATCTTCTTAATTTCCCACATATATATATATATATATTCCTAATTGTCAACTTCCTTATCTTTTCTGTAAATTAATATAT

Coding sequence (CDS)

ATGGAAAACCAACCATGGTTAAAACCCAAAAAAAAGAAAATAATATTGCTTCTGCCTTCATCTGTTGTGAGACAAACACATATGAAGCTTTCTGTTGCTTTCTTCCTTCTCCTAATTTCTCTTCTCCTGTTTGGAGATGTAAGCCATGGAAGCAAGAAGGAAGAAGGAGAATACTGGAAAAAGATAATGAAAGATGAAGCAATTCCAGAGATGTTAAAAGAGCTTTTATTGGATAATGATAATTCAATGGTTGTGGACAACAACAACAACAACCAAAAGGAGCATTTTATGACCAATTTTGATCCTCATCCAAATGCTATAATTTACCATGCCCATTCCCATGCTCATACCTCCACTCATACCAAAATCAATCCCACTCTTCCCAATTTATCCCCATAA

Protein sequence

MENQPWLKPKKKKIILLLPSSVVRQTHMKLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKINPTLPNLSP

Homology

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BLAST of CcUC11G212870 vs. NCBI nr
Match: XP_038901980.1 (organ-specific protein P4 [Benincasa hispida])

HSP 1 Score: 148.7 bits (374), Expect = 3.6e-32
Identity = 80/107 (74.77%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 28  MKLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDN 87
           MKLSVAFFLLL+SLLL G++SHGS+KEEGEYWKKIMKDE IP++LKE LLD DNS+V   
Sbjct: 1   MKLSVAFFLLLLSLLLIGEISHGSRKEEGEYWKKIMKDEEIPDILKESLLD-DNSLV--- 60

Query: 88  NNNNQKEHFMTNFDPHPNAIIYH-AHSHAHTST-HTKINPTLPNLSP 133
            +NN+KEHFMTNFDPHPNAIIYH AH+  H +  H KINPTLPN SP
Sbjct: 61  -DNNKKEHFMTNFDPHPNAIIYHTAHASTHNNNHHLKINPTLPNSSP 102

[Close]

BLAST of CcUC11G212870 vs. NCBI nr
Match: XP_004148852.1 (uncharacterized protein LOC101213460 [Cucumis sativus] >KGN61786.1 hypothetical protein Csa_006572 [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-30
Identity = 80/109 (73.39%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 28  MKLSVAFFLLLISLLLFGDVSHG-SKKEEGEYWKKIMKDEAIPEMLKELLL--DNDNSMV 87
           MKLS+AFF LL SLLL GD++HG S+KEEGEYWKKIMK+EA+PEMLKELL+  D+ +SMV
Sbjct: 1   MKLSIAFFFLL-SLLLLGDLTHGRSRKEEGEYWKKIMKEEALPEMLKELLIEADDPSSMV 60

Query: 88  VDNNNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKINPT-LPNLSP 133
             NNN  QKEHF+TNFDPHPNAIIYHAH+HAH S     NPT LPNLSP
Sbjct: 61  EYNNNKQQKEHFLTNFDPHPNAIIYHAHAHAHNS-----NPTALPNLSP 103

[Close]

BLAST of CcUC11G212870 vs. NCBI nr
Match: XP_022986644.1 (organ-specific protein S2-like [Cucurbita maxima])

HSP 1 Score: 125.6 bits (314), Expect = 3.3e-25
Identity = 71/115 (61.74%), Postives = 84/115 (73.04%), Query Frame = 0


Query: 28  MKLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDN 87
           MKLS+AFFLLL SL+LF DVSHGS+K++G+YWKK+MK+E IPEMLKELL   D+SMV   
Sbjct: 1   MKLSLAFFLLL-SLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLF--DDSMV--- 60

Query: 88  NNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTH----------TKINPTLPNLSP 133
              NQK+ FM NFDPHPNAIIYHAH+HAH   H           K NPT+ N +P
Sbjct: 61  --ENQKQRFMNNFDPHPNAIIYHAHAHAHAHGHGAATPRRNIDIKFNPTVANSAP 107

[Close]

BLAST of CcUC11G212870 vs. NCBI nr
Match: XP_022944721.1 (organ-specific protein P4-like [Cucurbita moschata])

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-24
Identity = 72/113 (63.72%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 28  MKLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDN 87
           MKLS+AFF LLISL+LF DVSHGS+K++G+YWKK+MK+E IPEMLKELL   D+SMV   
Sbjct: 1   MKLSLAFF-LLISLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLF--DDSMV--- 60

Query: 88  NNNNQKEHFMTNFDPHPNAIIYHAHSHAH-----TSTHT---KINPTLPNLSP 133
              NQK+ FM NFDPHPNAIIYHAH+HAH     T T     K NPT+ N +P
Sbjct: 61  --ENQKQRFMNNFDPHPNAIIYHAHAHAHGHGAATPTRNIDIKSNPTVANSAP 105

[Close]

BLAST of CcUC11G212870 vs. NCBI nr
Match: KAG6571127.1 (hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010938.1 hypothetical protein SDJN02_27736, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-24
Identity = 72/113 (63.72%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 28  MKLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDN 87
           MKLS+AFFLLL SL+LF DVSHGS+K++G+YWKK+MK+E IPEMLKELL   D+SMV   
Sbjct: 1   MKLSLAFFLLL-SLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLF--DDSMV--- 60

Query: 88  NNNNQKEHFMTNFDPHPNAIIYHAHSHAH-----TSTHT---KINPTLPNLSP 133
              NQK+ FM NFDPHPNAIIYHAH+HAH     T T     K NPT+ N +P
Sbjct: 61  --ENQKQRFMNNFDPHPNAIIYHAHAHAHGHGAATPTRNIDIKSNPTVANSAP 105

[Close]

BLAST of CcUC11G212870 vs. ExPASy TrEMBL
Match: A0A0A0LP62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245500 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 9.6e-31
Identity = 80/109 (73.39%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 28  MKLSVAFFLLLISLLLFGDVSHG-SKKEEGEYWKKIMKDEAIPEMLKELLL--DNDNSMV 87
           MKLS+AFF LL SLLL GD++HG S+KEEGEYWKKIMK+EA+PEMLKELL+  D+ +SMV
Sbjct: 1   MKLSIAFFFLL-SLLLLGDLTHGRSRKEEGEYWKKIMKEEALPEMLKELLIEADDPSSMV 60

Query: 88  VDNNNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKINPT-LPNLSP 133
             NNN  QKEHF+TNFDPHPNAIIYHAH+HAH S     NPT LPNLSP
Sbjct: 61  EYNNNKQQKEHFLTNFDPHPNAIIYHAHAHAHNS-----NPTALPNLSP 103

[Close]

BLAST of CcUC11G212870 vs. ExPASy TrEMBL
Match: A0A6J1JGL9 (organ-specific protein S2-like OS=Cucurbita maxima OX=3661 GN=LOC111484322 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.6e-25
Identity = 71/115 (61.74%), Postives = 84/115 (73.04%), Query Frame = 0


Query: 28  MKLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDN 87
           MKLS+AFFLLL SL+LF DVSHGS+K++G+YWKK+MK+E IPEMLKELL   D+SMV   
Sbjct: 1   MKLSLAFFLLL-SLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLF--DDSMV--- 60

Query: 88  NNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTH----------TKINPTLPNLSP 133
              NQK+ FM NFDPHPNAIIYHAH+HAH   H           K NPT+ N +P
Sbjct: 61  --ENQKQRFMNNFDPHPNAIIYHAHAHAHAHGHGAATPRRNIDIKFNPTVANSAP 107

[Close]

BLAST of CcUC11G212870 vs. ExPASy TrEMBL
Match: A0A6J1FYV4 (organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111449094 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 6.0e-25
Identity = 72/113 (63.72%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 28  MKLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDN 87
           MKLS+AFF LLISL+LF DVSHGS+K++G+YWKK+MK+E IPEMLKELL   D+SMV   
Sbjct: 1   MKLSLAFF-LLISLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLF--DDSMV--- 60

Query: 88  NNNNQKEHFMTNFDPHPNAIIYHAHSHAH-----TSTHT---KINPTLPNLSP 133
              NQK+ FM NFDPHPNAIIYHAH+HAH     T T     K NPT+ N +P
Sbjct: 61  --ENQKQRFMNNFDPHPNAIIYHAHAHAHGHGAATPTRNIDIKSNPTVANSAP 105

[Close]

BLAST of CcUC11G212870 vs. ExPASy TrEMBL
Match: A0A6J1G7K5 (organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111451468 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.6e-20
Identity = 59/101 (58.42%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 28  MKLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDN 87
           MKLS AFFLL   L+L  +VSH ++KE+GEYWKK+MKDEAIPEMLKELL D+D+ +    
Sbjct: 1   MKLSAAFFLLF--LILLANVSH-ARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLV---- 60

Query: 88  NNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKINPTLP 129
           +++ Q EHFM NFD HPNAIIYH+H   H     K  P+ P
Sbjct: 61  SSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP 94

[Close]

BLAST of CcUC11G212870 vs. ExPASy TrEMBL
Match: A0A6J1L3N5 (organ-specific protein P4-like OS=Cucurbita maxima OX=3661 GN=LOC111499606 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.9e-19
Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 28  MKLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDN 87
           MKLS AFFLL  SLLL  +VSH ++KE+GEYWKK+MKDEAIPEMLKELL D+D+ +    
Sbjct: 1   MKLSAAFFLL--SLLLLANVSH-ARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLV---- 60

Query: 88  NNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKINPTLP 129
           +++ Q E FM NFD HPNAIIYH+H   H     K   T P
Sbjct: 61  SSDAQSERFMNNFDTHPNAIIYHSHGATHDHPGHKTKLTAP 94

[Close]

BLAST of CcUC11G212870 vs. TAIR 10
Match: AT1G49310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; Has 11 Blast hits to 11 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06
Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 35  FLLLISLLLFGDVSHG-SKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNNQK 94
           F++L+S LLF ++S G +     EYWKK+MK+E +PE +KELL         +N     +
Sbjct: 11  FIVLLSFLLFVNLSEGRTGGVAEEYWKKMMKNEPLPEPIKELL---------NNPFRTAQ 70

Query: 95  EHFMTNFDPHPNAIIYH 111
           E F+ NFD     IIYH
Sbjct: 71  ERFIQNFDTKSVVIIYH 78

The following BLAST results are available for this feature:

BLAST of CcUC11G212870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901980.1	3.6e-32	74.77	organ-specific protein P4 [Benincasa hispida]	[more]
XP_004148852.1	2.0e-30	73.39	uncharacterized protein LOC101213460 [Cucumis sativus] >KGN61786.1 hypothetical ...	[more]
XP_022986644.1	3.3e-25	61.74	organ-specific protein S2-like [Cucurbita maxima]	[more]
XP_022944721.1	1.2e-24	63.72	organ-specific protein P4-like [Cucurbita moschata]	[more]
KAG6571127.1	1.6e-24	63.72	hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CcUC11G212870 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC11G212870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LP62	9.6e-31	73.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245500 PE=4 SV=1	[more]
A0A6J1JGL9	1.6e-25	61.74	organ-specific protein S2-like OS=Cucurbita maxima OX=3661 GN=LOC111484322 PE=4 ...	[more]
A0A6J1FYV4	6.0e-25	63.72	organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111449094 PE=...	[more]
A0A6J1G7K5	7.6e-20	58.42	organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111451468 PE=...	[more]
A0A6J1L3N5	4.9e-19	59.41	organ-specific protein P4-like OS=Cucurbita maxima OX=3661 GN=LOC111499606 PE=4 ...	[more]

BLAST of CcUC11G212870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49310.1	1.6e-06	41.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024489	Organ specific protein	PFAM	PF10950	Organ_specific	coord: 53..116 e-value: 5.7E-10 score: 39.9
None	No IPR available	PANTHER	PTHR33731	PROTEIN, PUTATIVE-RELATED	coord: 32..122
None	No IPR available	PANTHER	PTHR33731:SF2	PROTEIN, PUTATIVE-RELATED	coord: 32..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G212870.1	CcUC11G212870.1	mRNA