CcUC11G212540 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G212540
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	late embryogenesis abundant protein-like
Location	CicolChr11: 4446145 .. 4448603 (-)
RNA-Seq Expression	CcUC11G212540
Synteny	CcUC11G212540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAATGTACGTGATGAGCATGGAAACCCGGTTCAACTGACCGACGAACGTGGAAACCCGGTTCAGTTGACCGACGAATTTGGCAACCCCATGCACCTGACCGGAGTCGTCGCCACCACACCCTCCAAGCTTGACACCACCACCACTATACCCTCCAAGCTCGACTCCACCACCACCACCACCACCACCACCACAACACCCTCCAAGCCCGACTCTGCCACCACCACCACCCCCGCTAAGGATGATGTCGCCCCGACGCAGCTCACTCGAGAAGCCCATGATGGCTCACCGCGTCGTTCTAGCAGCTCCAGCTCTAGCTCTGTGAGTAATTTGTGTTGAGAAGATTGTGAATTAAGAGTCGTTTTTGCTGTTTCTAATTTTCTCTCTGTCCAAGTTTGGCAATTCTTTCACTAAAATTAGATTATGAGTTTTAGCAGATATTCTAAAATTGTTTTAAATTATTTTTATTATGTTTGAAATTACTTCAAATTAATTTAATAGTTAATTTCACATGCAATTTTTATATCAACAAATTGGTTTTGAATGATTAAAAATAAAATGATTTTGAACATGACAAAAAGAAAAAATTTAACCATTTTAGAATTACCCATGTCCTTAATTTGGTTGTTTAATGCATTCCCTTTAAGAGGTGTACTTTCAATTTTTGGATCTCATAGATTGGACTTTAAAATATAATTTTTAAGTTCTCTTGGGTAACTATTTCCATTTTTTTCCTCAATTTTTTTGCCTGGTTTGCATCTATTTTAAACGTTAAACACAAAAAAAAAATTGTTACCAAACAAGTTTGAATTTTTAATTTTGTCGTGGATAGGTTTACAAATCTTCATTCTATAAAATTCGAGTGCTTGTTAGGTACAAAACTGAACATTAGAGTACATTATTTATAATACAAAATTTAATTTTGTATCAAATAGATGAATTGAGTCTACCATAAGGTTTTTTTTTTTTTTAATATCTATAGGACACTTTCTGTTTAAGAAACTTCGATAACCATTTGGTTTTTATTTTTATTTTTCTTTTAAATTAAGCTTCATTTCTAAATTTCAATTTTGTTTTCAACTTTGTATGAACTTGTTTTCCTGATAGGAGCTTAAGTCTTTGGTCTTTGGGTTTTTTTTTTTTTTTTTTTTTGTTAAATAAAGTCGATAGAGACTACTCTTACTTCAAATTTCTTTTTTGGTTATCTATTTTTTACAAAAAATAGAGTCAATATTTGAAAGTTAAAAAAATTAACTTTTAAAAAATTGTTTTTGTTTTTAGAATTTGACTAATAATTCAACCATCTTATTCAAGAAAAACAAATCATAAATTGGGAATCGTTACTAGATGACGCCAAAAATTTTGTCCGTTTTTCTTATTTACTTTTTGAAAATTTGAGCCCTCCTTCCACCCACTTCTTTTTGTTATCGATCTTTATTAAGCTTTTAAAAAATCGAGCTAAGTTTTAAAATGTTCTTAGAAAATAGTTTTTTAAAAATTTTTCTTTTTTTAAAATTCAGCTAAAAATCTAATTCAGAGAAAGATGAAAATTCTTTAAAAAAAAATTAAGAGGAAATAACTTAATTTTAAATAGGCTATTTTGATAAATATAATCTGATTTTTGTTTTATGTTTTTGAAAATTAGGTTTATTTTTACACAATTTCTTTTGGAAGTGATCTTGGAGTAATTTAATATTTTATTTTATACATTTAGATGTAATTTTCAGTTCGAGGTTTGGAATGATTAAAATTATTTGATTTTTTAGTTCTACTACAAAAAATTGAACACTAGTTTTGTAAGTTTTCAAATTTTGGCTTTTGATTTCTATTTTCGTGGCTTTTGATTTTGTAACTTCTCCTAAAATATTAACAACAATAGAAATCCATATTTATAAGTTCAATTATTTAAAAAAAAAAAAAAAAAGAAAAAAGAAAAACTAAATTGATATCAAATACGAGTCTAGAAAATTATAGTTATGTCAAAAAGGTGCGTAAGGGCATGTTTAGTAAAATCAGTACTGTAGTTTTCAAGATGTTCGTAAAAAATTTTTTAATCCTTCAATAGGAGAGAAGGAGAGATATGTTTAGAAGTATAAAATAAAACATTAATTAGTGATATTAAATATGATAAAAATAACAATAATAATAATAATAATAATAAACAATAATTTGTTATATTTTAACAATTAGACCTAATTTTCAATTCACAATTGATGATGACTGTGCAGTCGGAGGATGACGGGCAAGGCGGGAGGAGGAGGAAGAAGAAGGGGTTGACACAGAAGATAAAGGAGAAGTTAACAGGAAGCGGAAAACACAAAGAGGCGAGCACGGCGGGGGTAGAGCACCACCATAGCAGCACCGTGACCACGTCGGTGGACATCGAACATCAAGAACATGGCAAGAAGGGGGTTATGGAGAAGATCAAAGAGAAATTGCCTGGCCATCACCATTAA

mRNA sequence

ATGGCTAATGTACGTGATGAGCATGGAAACCCGGTTCAACTGACCGACGAACGTGGAAACCCGGTTCAGTTGACCGACGAATTTGGCAACCCCATGCACCTGACCGGAGTCGTCGCCACCACACCCTCCAAGCTTGACACCACCACCACTATACCCTCCAAGCTCGACTCCACCACCACCACCACCACCACCACCACAACACCCTCCAAGCCCGACTCTGCCACCACCACCACCCCCGCTAAGGATGATGTCGCCCCGACGCAGCTCACTCGAGAAGCCCATGATGGCTCACCGCGTCGTTCTAGCAGCTCCAGCTCTAGCTCTTCGGAGGATGACGGGCAAGGCGGGAGGAGGAGGAAGAAGAAGGGGTTGACACAGAAGATAAAGGAGAAGTTAACAGGAAGCGGAAAACACAAAGAGGCGAGCACGGCGGGGGTAGAGCACCACCATAGCAGCACCGTGACCACGTCGGTGGACATCGAACATCAAGAACATGGCAAGAAGGGGGTTATGGAGAAGATCAAAGAGAAATTGCCTGGCCATCACCATTAA

Coding sequence (CDS)

ATGGCTAATGTACGTGATGAGCATGGAAACCCGGTTCAACTGACCGACGAACGTGGAAACCCGGTTCAGTTGACCGACGAATTTGGCAACCCCATGCACCTGACCGGAGTCGTCGCCACCACACCCTCCAAGCTTGACACCACCACCACTATACCCTCCAAGCTCGACTCCACCACCACCACCACCACCACCACCACAACACCCTCCAAGCCCGACTCTGCCACCACCACCACCCCCGCTAAGGATGATGTCGCCCCGACGCAGCTCACTCGAGAAGCCCATGATGGCTCACCGCGTCGTTCTAGCAGCTCCAGCTCTAGCTCTTCGGAGGATGACGGGCAAGGCGGGAGGAGGAGGAAGAAGAAGGGGTTGACACAGAAGATAAAGGAGAAGTTAACAGGAAGCGGAAAACACAAAGAGGCGAGCACGGCGGGGGTAGAGCACCACCATAGCAGCACCGTGACCACGTCGGTGGACATCGAACATCAAGAACATGGCAAGAAGGGGGTTATGGAGAAGATCAAAGAGAAATTGCCTGGCCATCACCATTAA

Protein sequence

MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTTTTTTTTTPSKPDSATTTTPAKDDVAPTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEKIKEKLPGHHH

Homology

[Close]

BLAST of CcUC11G212540 vs. NCBI nr
Match: XP_038902144.1 (late embryogenesis abundant protein-like isoform X2 [Benincasa hispida])

HSP 1 Score: 247.7 bits (631), Expect = 7.9e-62
Identity = 142/183 (77.60%), Postives = 147/183 (80.33%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVAT+PSKLD              
Sbjct: 83  MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATSPSKLD-------------- 142

Query: 61  TTTTTTTPSKPDSATTTTPAKDDVAPTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRK 120
                        +TTTTPA DDVA TQLTREAHDGSPRRSSSSSSSSSEDDGQGG RRK
Sbjct: 143 -------------STTTTPAGDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGG-RRK 202

Query: 121 KKGLTQKIKEKLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEKIKEKLPG 180
           KKGLTQKIKEKLTGSGKHKEA T G EHH S+TVTTS  +EHQEHGKKGVMEKIKE+LPG
Sbjct: 203 KKGLTQKIKEKLTGSGKHKEAGTTGAEHHQSTTVTTST-VEHQEHGKKGVMEKIKERLPG 236

Query: 181 HHH 184
           HHH
Sbjct: 263 HHH 236

[Close]

BLAST of CcUC11G212540 vs. NCBI nr
Match: XP_038902143.1 (embryogenic cell protein 40-like isoform X1 [Benincasa hispida])

HSP 1 Score: 240.7 bits (613), Expect = 9.7e-60
Identity = 142/183 (77.60%), Postives = 147/183 (80.33%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVAT+PSKLD+TTT P        
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATSPSKLDSTTTTP-------- 60

Query: 61  TTTTTTTPSKPDSATTTTPAKDDVAPTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRK 120
                   S          A DDVA TQLTREAHDGSPRRSSSSSSSSSEDDGQGG RRK
Sbjct: 61  -------VSYTHLDVYKRQAGDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGG-RRK 120

Query: 121 KKGLTQKIKEKLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEKIKEKLPG 180
           KKGLTQKIKEKLTGSGKHKEA T G EHH S+TVTTS  +EHQEHGKKGVMEKIKE+LPG
Sbjct: 121 KKGLTQKIKEKLTGSGKHKEAGTTGAEHHQSTTVTTST-VEHQEHGKKGVMEKIKERLPG 166

Query: 181 HHH 184
           HHH
Sbjct: 181 HHH 166

[Close]

BLAST of CcUC11G212540 vs. NCBI nr
Match: XP_004150075.1 (embryogenic cell protein 40 [Cucumis sativus] >KGN61826.1 hypothetical protein Csa_006233 [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 5.1e-53
Identity = 132/183 (72.13%), Postives = 136/183 (74.32%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPM LTGVV TTPS L  T   PS L  T  
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTP--PSNLHPTAV 60

Query: 61  TTTTTTTPSKPDSATTTTPAKDDVAPTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRK 120
           TTT                  ++VA TQ  RE HD SPRRSSSSSSSSSEDDGQGGRRRK
Sbjct: 61  TTT-----------------GENVAQTQPPREIHDASPRRSSSSSSSSSEDDGQGGRRRK 120

Query: 121 KKGLTQKIKEKLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEKIKEKLPG 180
           KKGLTQKIKEKLTGSGKHKEA T G   HH ST TT+  +EH E GKKGVMEKIKEKLPG
Sbjct: 121 KKGLTQKIKEKLTGSGKHKEAGTTG--EHHESTTTTTTSVEHHEPGKKGVMEKIKEKLPG 162

Query: 181 HHH 184
           HHH
Sbjct: 181 HHH 162

[Close]

BLAST of CcUC11G212540 vs. NCBI nr
Match: XP_008460975.1 (PREDICTED: late embryogenesis abundant protein-like [Cucumis melo])

HSP 1 Score: 217.6 bits (553), Expect = 8.8e-53
Identity = 129/183 (70.49%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVV TTPSKLD              
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVGTTPSKLD-------------- 60

Query: 61  TTTTTTTPSKPDSATTTTPAKDDVAPTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRK 120
                  P+ P S    T   ++VA TQ  REAHD SPRRSSSSSSSSSEDDGQGGRRRK
Sbjct: 61  -------PTAPPSNLGPTTIGENVAQTQPPREAHDTSPRRSSSSSSSSSEDDGQGGRRRK 120

Query: 121 KKGLTQKIKEKLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEKIKEKLPG 180
           KKGLTQKIKEKLTGSGKHKE  T    H  ++T TT   +EHQE GKKGVMEKIKEKLPG
Sbjct: 121 KKGLTQKIKEKLTGSGKHKEGGT----HDSTATTTTVTSVEHQETGKKGVMEKIKEKLPG 158

Query: 181 HHH 184
           HHH
Sbjct: 181 HHH 158

[Close]

BLAST of CcUC11G212540 vs. NCBI nr
Match: XP_022986610.1 (late embryogenesis abundant protein-like [Cucurbita maxima])

HSP 1 Score: 182.2 bits (461), Expect = 4.1e-42
Identity = 124/206 (60.19%), Postives = 138/206 (66.99%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+ LTGV  T    +     +  +  +   
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60

Query: 61  TTTTTTTPSKP----------------DSATTTTPAK------DDVAPTQLTREAHDGSP 120
            T  +TT SKP                 +   TT +K      D V  TQ  RE HD S 
Sbjct: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 RRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEA--STAGVEHHHSSTVTT 180
            RSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT  GKHKEA  +T G  HH S+TVT+
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT--GKHKEAGTTTTGAGHHQSTTVTS 180

Query: 181 SVDIEHQEHGKKGVMEKIKEKLPGHH 183
           +VD+EHQEHGKKGV+EKIKEKLPGHH
Sbjct: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 204

[Close]

BLAST of CcUC11G212540 vs. ExPASy Swiss-Prot
Match: Q96261 (Probable dehydrin LEA OS=Arabidopsis thaliana OX=3702 GN=LEA PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.6e-25
Identity = 95/190 (50.00%), Postives = 115/190 (60.53%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNP-VQLTDEFGNPMHLTGVVATTPS-KLDTTTTIPSKLDST 60
           MA++RDE GNP+ LTD +GNP V LTDE GNPM+LTGVV++TP  K  TT+ I     ST
Sbjct: 1   MADLRDEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAEHPTST 60

Query: 61  TTTTTTTTTPSKPDSATTTTPAKDDVAP-TQLTREAHDGS----PRRSSSSSSSSSEDDG 120
              T     P+   +AT  T            T + H GS     RRS SSSSSSSEDDG
Sbjct: 61  VGETHPAAAPAGAGAATAATATGVSAGTGATTTGQQHHGSLEEHLRRSGSSSSSSSEDDG 120

Query: 121 QGGRRRKKKGLTQKIKEKLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEK 180
           QGGRR  KK + +KIKEK  GSGKHK+  T       ++  TT      Q H KKG++EK
Sbjct: 121 QGGRR--KKSIKEKIKEKF-GSGKHKDEQTP------ATATTTGPATTDQPHEKKGILEK 180

Query: 181 IKEKLPGHHH 184
           IK+KLPGHH+
Sbjct: 181 IKDKLPGHHN 181

[Close]

BLAST of CcUC11G212540 vs. ExPASy Swiss-Prot
Match: P21298 (Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-24
Identity = 90/189 (47.62%), Postives = 112/189 (59.26%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MA+++DE GNP+ LTD  GNPVQL+DEFGNPMH+TGV ++ P   D+ T     +    T
Sbjct: 1   MADLKDERGNPIHLTDAYGNPVQLSDEFGNPMHITGVASSAPQYKDSVT---GNIAEYPT 60

Query: 61  TTTTTTTPSKPDSATTTTPAKDDVAPTQLTREAHDGS----PRRSSSSSSSSSEDDGQGG 120
                   +   +A TT         T  T + H GS     RRS SSSSSSSEDDGQGG
Sbjct: 61  EAPPAGVAAGTGAAATTAAGVTTSETT--TGQEHHGSLGEHLRRSGSSSSSSSEDDGQGG 120

Query: 121 RRRKKKGLTQKIKEKLTGSGKHK--EASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEKI 180
           RR  KK +  KIK+KL G GKHK  +  T       ++T TT+     Q H KKG++EKI
Sbjct: 121 RR--KKSIKDKIKDKL-GGGKHKDEQTPTTATTTGPTTTTTTTGAAADQHHEKKGILEKI 180

Query: 181 KEKLPGHHH 184
           KEKLPGHH+
Sbjct: 181 KEKLPGHHN 181

[Close]

BLAST of CcUC11G212540 vs. ExPASy Swiss-Prot
Match: P25863 (Dehydrin Xero 1 OS=Arabidopsis thaliana OX=3702 GN=XERO1 PE=2 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 5.4e-13
Identity = 58/113 (51.33%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 71  PDSATTTTPAKDDVAPTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKE 130
           P  ATT        AP         G   RS SSSSSSSEDDG GGRRRKKKG+T+KIKE
Sbjct: 23  PFPATTGAYGTAGGAPAVAEGGGLSGMLHRSGSSSSSSSEDDGLGGRRRKKKGITEKIKE 82

Query: 131 KLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEKIKEKLPGHHH 184
           KL G     + S+ G       + TT+ D     H KKG+MEKIKEKLPG HH
Sbjct: 83  KLPGHHDSNKTSSLG-------STTTAYDTGTVHHEKKGMMEKIKEKLPGGHH 128

[Close]

BLAST of CcUC11G212540 vs. ExPASy Swiss-Prot
Match: Q07322 (Embryogenic cell protein 40 OS=Daucus carota OX=4039 GN=ECP40 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.1e-11
Identity = 93/304 (30.59%), Postives = 118/304 (38.82%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSK---------------- 60
           MA++RDE GNP+QLTD+ GNPVQLTDE+GNP+H+TGV  T  +                 
Sbjct: 1   MADLRDEKGNPIQLTDQHGNPVQLTDEYGNPVHITGVATTGATTGHHDHGVGGASHGGVG 60

Query: 61  ---LDTTTTIPSKLDSTTTTTT-----------------------TTTTPSKPDSATTTT 120
              L           +T    T                        T T +   + T TT
Sbjct: 61  STGLGGVAGAAGLAGATAAAATHGGSHGGTGTHGVGPTGVGAAHGGTGTTTGLGTGTGTT 120

Query: 121 PAKDDVAPTQL-------------------------------TREAHDG----------- 180
                + PT +                               T  AH G           
Sbjct: 121 GQTHGMGPTGIGGTHGVGSTGIGGAHGGTGVLGQTHGMGPTGTGAAHGGLGTGQSGLGSS 180

Query: 181 -------------------------SPRRS---------SSSSSSSSEDDGQGGRRRKKK 183
                                    +P +          S+SSSSSSEDDGQGGRR  KK
Sbjct: 181 YATHGGLGTGIGTGSAPASAGSHSHAPEKKTALGEQLHRSNSSSSSSEDDGQGGRR--KK 240

[Close]

BLAST of CcUC11G212540 vs. ExPASy Swiss-Prot
Match: A8CVF3 (Dehydrin DHN1 OS=Avicennia marina OX=82927 GN=DHN1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-09
Identity = 79/209 (37.80%), Postives = 95/209 (45.45%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MA   D++G   + TDE GNP++ T EFG     TG          T TT+    D   T
Sbjct: 1   MAEYGDQYG---RQTDEYGNPIRQTGEFG----ATGAYGANQQYGTTGTTVGYGTDQCVT 60

Query: 61  TTTT--TTTPSKPDSATTTTPAKDDVAPTQLTRE------------------AHDGSPRR 120
           T TT    T       TT     D    T  T E                     G  RR
Sbjct: 61  TVTTGAQKTDQYGTPGTTGAYGTDQYGTTGTTGEYGTHGGGIAPGATDAGLAGGGGGHRR 120

Query: 121 SSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEAS------TAGVEHHHSSTV 180
             SS SSSSEDDGQGGRR  KKG+ +KIKEKL G G   + +      + G  + H    
Sbjct: 121 LGSSGSSSSEDDGQGGRR--KKGIKEKIKEKLPGGGHGDDQTHPTPPGSGGYGYEHGGAA 180

Query: 181 TTSVDIEHQEHGKKGVMEKIKEKLPGHHH 184
            +    EH+E  KKG+M+KIKEKLPG HH
Sbjct: 181 ESP---EHEE--KKGIMDKIKEKLPGGHH 195

[Close]

BLAST of CcUC11G212540 vs. ExPASy TrEMBL
Match: A0A0A0LPB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249810 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.5e-53
Identity = 132/183 (72.13%), Postives = 136/183 (74.32%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPM LTGVV TTPS L  T   PS L  T  
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTP--PSNLHPTAV 60

Query: 61  TTTTTTTPSKPDSATTTTPAKDDVAPTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRK 120
           TTT                  ++VA TQ  RE HD SPRRSSSSSSSSSEDDGQGGRRRK
Sbjct: 61  TTT-----------------GENVAQTQPPREIHDASPRRSSSSSSSSSEDDGQGGRRRK 120

Query: 121 KKGLTQKIKEKLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEKIKEKLPG 180
           KKGLTQKIKEKLTGSGKHKEA T G   HH ST TT+  +EH E GKKGVMEKIKEKLPG
Sbjct: 121 KKGLTQKIKEKLTGSGKHKEAGTTG--EHHESTTTTTTSVEHHEPGKKGVMEKIKEKLPG 162

Query: 181 HHH 184
           HHH
Sbjct: 181 HHH 162

[Close]

BLAST of CcUC11G212540 vs. ExPASy TrEMBL
Match: A0A1S3CDP4 (late embryogenesis abundant protein-like OS=Cucumis melo OX=3656 GN=LOC103499700 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.2e-53
Identity = 129/183 (70.49%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVV TTPSKLD              
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVGTTPSKLD-------------- 60

Query: 61  TTTTTTTPSKPDSATTTTPAKDDVAPTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRK 120
                  P+ P S    T   ++VA TQ  REAHD SPRRSSSSSSSSSEDDGQGGRRRK
Sbjct: 61  -------PTAPPSNLGPTTIGENVAQTQPPREAHDTSPRRSSSSSSSSSEDDGQGGRRRK 120

Query: 121 KKGLTQKIKEKLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEKIKEKLPG 180
           KKGLTQKIKEKLTGSGKHKE  T    H  ++T TT   +EHQE GKKGVMEKIKEKLPG
Sbjct: 121 KKGLTQKIKEKLTGSGKHKEGGT----HDSTATTTTVTSVEHQETGKKGVMEKIKEKLPG 158

Query: 181 HHH 184
           HHH
Sbjct: 181 HHH 158

[Close]

BLAST of CcUC11G212540 vs. ExPASy TrEMBL
Match: A0A6J1JEI1 (late embryogenesis abundant protein-like OS=Cucurbita maxima OX=3661 GN=LOC111484299 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 2.0e-42
Identity = 124/206 (60.19%), Postives = 138/206 (66.99%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+ LTGV  T    +     +  +  +   
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60

Query: 61  TTTTTTTPSKP----------------DSATTTTPAK------DDVAPTQLTREAHDGSP 120
            T  +TT SKP                 +   TT +K      D V  TQ  RE HD S 
Sbjct: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 RRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEA--STAGVEHHHSSTVTT 180
            RSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT  GKHKEA  +T G  HH S+TVT+
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT--GKHKEAGTTTTGAGHHQSTTVTS 180

Query: 181 SVDIEHQEHGKKGVMEKIKEKLPGHH 183
           +VD+EHQEHGKKGV+EKIKEKLPGHH
Sbjct: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 204

[Close]

BLAST of CcUC11G212540 vs. ExPASy TrEMBL
Match: A0A6J1FTT6 (late embryogenesis abundant protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448732 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.2e-41
Identity = 122/208 (58.65%), Postives = 136/208 (65.38%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+ LTGV  T    +     +  +L +   
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60

Query: 61  TTTTTTT-----------------PSKPDSATTT-----TPAKDDVAPTQLTREAHDGSP 120
            T  +TT                 P  P    TT     +   D V  TQ  RE HD S 
Sbjct: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 RRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEA----STAGVEHHHSSTV 180
            RSSSSSSSSSEDDGQGGRR+KKKGLTQKIKEKLT  GKHKEA    +T G  HH S+TV
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLT--GKHKEAGTTTTTTGAGHHQSTTV 180

Query: 181 TTSVDIEHQEHGKKGVMEKIKEKLPGHH 183
           T++VD+EHQEHGKKGV+EKIKEKLPGHH
Sbjct: 181 TSTVDVEHQEHGKKGVLEKIKEKLPGHH 206

[Close]

BLAST of CcUC11G212540 vs. ExPASy TrEMBL
Match: A0A5D3DZ78 (Late embryogenesis abundant protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00160 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 2.4e-40
Identity = 111/183 (60.66%), Postives = 117/183 (63.93%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVV TTPSKLD              
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVGTTPSKLD-------------- 60

Query: 61  TTTTTTTPSKPDSATTTTPAKDDVAPTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRK 120
                  P+ P S    T   ++VA TQ  REAHD SPRRSSSSSSSS            
Sbjct: 61  -------PTAPPSNLGPTTIGENVAQTQPPREAHDTSPRRSSSSSSSS------------ 120

Query: 121 KKGLTQKIKEKLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEKIKEKLPG 180
                 KIKEKLTGSGKHKE  T    H  ++T TT   +EHQE GKKGVMEKIKEKLPG
Sbjct: 121 ------KIKEKLTGSGKHKEGGT----HDSTATTTTVTSVEHQETGKKGVMEKIKEKLPG 140

Query: 181 HHH 184
           HHH
Sbjct: 181 HHH 140

[Close]

BLAST of CcUC11G212540 vs. TAIR 10
Match: AT2G21490.1 (dehydrin LEA )

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-26
Identity = 95/190 (50.00%), Postives = 115/190 (60.53%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNP-VQLTDEFGNPMHLTGVVATTPS-KLDTTTTIPSKLDST 60
           MA++RDE GNP+ LTD +GNP V LTDE GNPM+LTGVV++TP  K  TT+ I     ST
Sbjct: 1   MADLRDEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAEHPTST 60

Query: 61  TTTTTTTTTPSKPDSATTTTPAKDDVAP-TQLTREAHDGS----PRRSSSSSSSSSEDDG 120
              T     P+   +AT  T            T + H GS     RRS SSSSSSSEDDG
Sbjct: 61  VGETHPAAAPAGAGAATAATATGVSAGTGATTTGQQHHGSLEEHLRRSGSSSSSSSEDDG 120

Query: 121 QGGRRRKKKGLTQKIKEKLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEK 180
           QGGRR  KK + +KIKEK  GSGKHK+  T       ++  TT      Q H KKG++EK
Sbjct: 121 QGGRR--KKSIKEKIKEKF-GSGKHKDEQTP------ATATTTGPATTDQPHEKKGILEK 180

Query: 181 IKEKLPGHHH 184
           IK+KLPGHH+
Sbjct: 181 IKDKLPGHHN 181

[Close]

BLAST of CcUC11G212540 vs. TAIR 10
Match: AT3G50980.1 (dehydrin xero 1 )

HSP 1 Score: 75.9 bits (185), Expect = 3.8e-14
Identity = 58/113 (51.33%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 71  PDSATTTTPAKDDVAPTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKE 130
           P  ATT        AP         G   RS SSSSSSSEDDG GGRRRKKKG+T+KIKE
Sbjct: 23  PFPATTGAYGTAGGAPAVAEGGGLSGMLHRSGSSSSSSSEDDGLGGRRRKKKGITEKIKE 82

Query: 131 KLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEKIKEKLPGHHH 184
           KL G     + S+ G       + TT+ D     H KKG+MEKIKEKLPG HH
Sbjct: 83  KLPGHHDSNKTSSLG-------STTTAYDTGTVHHEKKGMMEKIKEKLPGGHH 128

[Close]

BLAST of CcUC11G212540 vs. TAIR 10
Match: AT4G39130.1 (Dehydrin family protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-11
Identity = 68/183 (37.16%), Postives = 93/183 (50.82%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MA+++DE GNP+ LTD  G P QL DEFGN MHLTGV  T P   +++ T P  + +  T
Sbjct: 1   MADLKDERGNPIYLTDAHGEPAQLMDEFGNAMHLTGVATTVPHLKESSYTGPHPITAPVT 60

Query: 61  TTTTTTTPSKPDSATTTTPAKDDVAPTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRK 120
           TT T      P  A   + + D +       + HD          +SS+E++G+G  R  
Sbjct: 61  TTNT------PHHAQPISVSHDPL-------QDHD-----LRWFGTSSTEENGEGVGR-- 120

Query: 121 KKGLTQKIKEKLTGSGKHKEASTAGVEHHHSSTVTTSVDIEHQEHGKKGVMEKIKEKLPG 180
           K  +T + K KL            GV+   ++TVT S       H KKG  +KIKEKL G
Sbjct: 121 KTNITDETKSKL------------GVDKPSAATVTGSG--SGSVHEKKGFFKKIKEKLSG 149

Query: 181 HHH 184
           HH+
Sbjct: 181 HHN 149

The following BLAST results are available for this feature:

BLAST of CcUC11G212540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902144.1	7.9e-62	77.60	late embryogenesis abundant protein-like isoform X2 [Benincasa hispida]	[more]
XP_038902143.1	9.7e-60	77.60	embryogenic cell protein 40-like isoform X1 [Benincasa hispida]	[more]
XP_004150075.1	5.1e-53	72.13	embryogenic cell protein 40 [Cucumis sativus] >KGN61826.1 hypothetical protein C...	[more]
XP_008460975.1	8.8e-53	70.49	PREDICTED: late embryogenesis abundant protein-like [Cucumis melo]	[more]
XP_022986610.1	4.1e-42	60.19	late embryogenesis abundant protein-like [Cucurbita maxima]	[more]

BLAST of CcUC11G212540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96261	3.6e-25	50.00	Probable dehydrin LEA OS=Arabidopsis thaliana OX=3702 GN=LEA PE=2 SV=1	[more]
P21298	3.1e-24	47.62	Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1	[more]
P25863	5.4e-13	51.33	Dehydrin Xero 1 OS=Arabidopsis thaliana OX=3702 GN=XERO1 PE=2 SV=2	[more]
Q07322	5.1e-11	30.59	Embryogenic cell protein 40 OS=Daucus carota OX=4039 GN=ECP40 PE=1 SV=1	[more]
A8CVF3	2.1e-09	37.80	Dehydrin DHN1 OS=Avicennia marina OX=82927 GN=DHN1 PE=1 SV=1	[more]

BLAST of CcUC11G212540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPB7	2.5e-53	72.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249810 PE=3 SV=1	[more]
A0A1S3CDP4	4.2e-53	70.49	late embryogenesis abundant protein-like OS=Cucumis melo OX=3656 GN=LOC103499700...	[more]
A0A6J1JEI1	2.0e-42	60.19	late embryogenesis abundant protein-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1FTT6	2.2e-41	58.65	late embryogenesis abundant protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5D3DZ78	2.4e-40	60.66	Late embryogenesis abundant protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of CcUC11G212540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21490.1	2.6e-26	50.00	dehydrin LEA	[more]
AT3G50980.1	3.8e-14	51.33	dehydrin xero 1	[more]
AT4G39130.1	1.4e-11	37.16	Dehydrin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 22..182 e-value: 1.2E-39 score: 136.4
IPR000167	Dehydrin	PANTHER	PTHR33346	DEHYDRIN XERO 2-RELATED	coord: 1..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..146
None	No IPR available	PANTHER	PTHR33346:SF5	DEHYDRIN XERO 2-RELATED	coord: 1..183
IPR030513	Dehydrin, conserved site	PROSITE	PS00315	DEHYDRIN_1	coord: 105..122
IPR030513	Dehydrin, conserved site	PROSITE	PS00823	DEHYDRIN_2	coord: 173..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G212540.1	CcUC11G212540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009631	cold acclimation
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009415	response to water