CcUC11G212220 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G212220
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ATP synthase subunit alpha
Location	CicolChr11: 4135985 .. 4140865 (-)
RNA-Seq Expression	CcUC11G212220
Synteny	CcUC11G212220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGTTTGTTTTATTATCTATTAGAGAATTTTATTTGAAATTTGACGATGAATTCACTTGCTTTGTTATGAAATAAGAAAAAATCAAGCCAAGTTTTAAACAACAATGTTCAAATTTTAAATTATAAAAAACAAGAGTTTCCTGTGTTTGGAATTTGACTATATTTAAATGTCTATTTAAAAAATAAAAATTACTATAAAAAAGGTGTGAGAAAGAAAACATAATTTTAAAGAACGAAAGACTAAATAATTATAAAATGAGACTTTCATATTTTTTTAATATGTTTTATATTTATAGAAAATTTTAAATTCTTAAGACTGGCTTACAAAATTCAAGTACCTTTTTATAATAAGAAAAGGTTTTTATTTTTTAATTTTAACTATAATTCAAATGCCATTATAAAAAAATGGTGAGAAAATAGAAACCTCAAAAATTAAAAAACAAACAGTTATTAAACAGGATTTATAATTTTCTAATATATATTATTTTAAAAAAACATAAATTTATAATATCTTAATTGTTAAGCTTGTCTTTCACGAAAATATCTATTTAAAAAAACATTTGAATAAAAGAGCCAAAGTTTAACTACTAGTATGAACAATAGAATAAAAAAAAGTTCAACCACTACGGGCAAATTTCAATTAGTATATAATTTGTACTATCAATCTCAAAGTCATTTAGGTTAAATTTACTCATCCTATATATATAATATAATATAATATAAAATATTTTTGAATTTTGTGTAAAAATACCCTCAAATTTTCAAAAGTTTCAAAAATACACTTGAACTTTCAAAAGTAGTTAAAAAAATATCCTTACCGTTAGTTTTGGATGAAATTCGTTAGTGTTTTGTTTAAAAAATACTCAATACTCTTACTGCTAGTATATGAACACAAATCATTAATATTTGTTTCAAATATCTTTGAACTTTTAAAAGTTAGATTAATACTATTAGCTTTGCAAAAAATAAAGTTTAAAATCTCACAAAAATCCAAAAATAAAAATATCCCCTTAAACTTACCAAAACTATAAATAGCCAAGTACAAGAAGAATGTATTTGCCTCTTAACACACTTAACTACTAATGTATAATCTTGTCAAAACATACAAGTTATAAGTTTCCCTTGGTATTTCCATTATTCTCTTTCTCTTTGTTATAATCTATGTACCTTAACTGAAGGAGGCAATTTTTTAATGAGATAAACCAAATGTTAAACAGGTAACAAGAAGGAGAGTAAGAGAGGAGAAAGAAAAAAAAAAAAAAAAAAAAGAGAAAATAGATAAGTGTTAGGTCATAAGTTGAATTAGGAGAGAGAGAAAATGGAAGAGATGTAGAGCAATGGTAAGAGCATTTTTTACTTTTTTTTTTCTTATGATACTAATTTAACTTTTGAAAGTTTATATTTATGCAATGAGATATTTATTATTTTTATTCATATATTAATAGTAAGCGTACTTTTGAATATTTCATTTAAGTTTAAAGGTATTTTTGAAACTTTTGAAAGTATAATGGTATTTTTTACACAAAGTGCAAAATTCAAAGACATTTTGTAATTTAACTTATATATATTAAAAAATAAAACTTCAACCTACTTTTACACGAATTTTCAAGTGGATGAGATCGATCGAGTCGTCTCAGTTAGAGATGGGATTGCACATGTTTATGGAGTGAAGGAGATTCAAGCTGGAAAAATGGTGGAATTTGCCAGCGGTGTAAAAGGAATAGCCTTAAATCTTGAGAATGAGAATGTAGGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAGGAGATCTTGTCAAGCGCACTGGATCAATTGTGGATGTTCCTGCGGAAAAGGCTATGCTCGGGCGTGTGGTCGATGCGTTGGGAGTACCTATTGATGGAAGAGGGGCTGTAAGCAATCACGAGTGAAGACGTGTCGAAGTGAAAGCCTATGGGATTATTGAATGTAAATTAGTGCTGTAACGACCCGACTAATACATCCTAATCAGACCATTACTCAATGCATGCAAATTTTAAGAAAAGACACGACGCTGAGTAATAAGAAAGAAATAATGCTACTTACGGAAATTTCTGTTTTATTTAACCCAAGAAAAACAATGAATAACCATATAGAAAGAATTTTTTTGGTTCGGGGTACCCCTAATAAAATCAACAAAATTCCATGAACAGAAAACAAAAAAAATCCATATACAAAATAAAAGACAAGCCTAAAAAAAAATGCAGTGCTAGGCGGAAGCTACTATGGGTCCCGTGAAGCCATCAAAGATTCCTCTTGTCATTCGCCAGCACGTTCTTTCCCTTACCTGAAAAAAAAATAAGATGAAAGGGTGAGCAATTATATTACTCAGTAAGTGACTTCACTACCGGAGCCGGGCTAGGCACCCAAGTCCTTTAAGTACATTAGTCATACAACATGCATATCAACATACTTCAATAGGAAACTGGTTATACTGGCACCCAAGTCCTTTAAGTGCATTAGTCATATGACAAACATATCAACATACTTCAATAGGAAACTGGTTATACTGGCACCCAAGTCCTTTAAGTGCATTAGTCATACGACAAGCATATCAACATACTTCAATAGGAAAACTAGTTATACTGGCACCCAAGTCCTTTAAGTGCATTAGCCTTAAGACATGCATATCTAACATACTTTTATAGGGAACTGGTTATACTCTCCCTAAGTTGGATTTGGATGTCCACAAACCTCTGGAGCCCCGAAGGAACTCTTACCTCTGGTGATCCCGAAGGATCACAAAACCTCTGGTGATCCCGAGGGACCACAACCTTTGGTGAACTCGAAGGAACACATCCTCTGGTGACCCCGAAGGACCACAACCTCTGGTGAACCCGAAGGAACACAACCTCTGGTGAACCCGAAGGAACACAACCTCTGGTGACCCCGAAGGACCACCACCTCTGGTGAACCCGAAGGAACACAACCTCTGGTGACCCCGAAGGACCACAACCTTTGGTGAACCCGAAGGAACACAACCTCTGGTGACCCCGAAGGAACACAACCTCTGGTGAACCCGAAGGAACTCAACCTCTGGTGACCCCGAAGGACCACAACCTCTGGTGAACCCGAAGGAACACAACCTCTGGTGAACCCGAAGGAACACAACCTCTGGTGAACCCGAAGGAACACAACCTCTGGTGACCCCGAAGGACCACAACCTCTGGTGAACCCGAAGGAACACATCCTCTGGTGAACATCCAGCCGACGTAGGGGAGTTACCACTACCCAGTACTCATGACCAATTTAAATTCTCACTCCTTTACTTCCATGAATTTATACACTAACAGCGCTGTTTACAATCATCTCATATACAAGCATAAGCATTTCACATACATCCTTTGAAACATAGGAAAAATCATACAAGCATGCTATCTCAATGGGCGTAGAAGTNTCATGACCAATTTAAATTCTCACTCCTTTACTTCCATGAATTTATACACTAACAGCGCTGTTTACAATCATCTCATATACAAGCATAAGCATTTCACATACATCCTTTGAAACATAGGAAAAATCATACAAGCATGCTATCTCAATGGGCGTAGAAGTATTACTCATCGTGGCAACTAAACATAAGGCGGGAAGGTGGTTCAGGTAGTAAAGTCACTTACCTGAGCAATTATATTCACTTATTCGCACGGCAGTCTGTTGGAAAGTTCTTGGTCCACCAAGTGTGGCTTAACTTGCAGTTGCTCTAATCCTTTTTACCCAACACAATTCCCGGCCACCTAAGGGAATTTTTATCACATAAGTCTCAAGCATCAACAGTTTTTTAACCAAATTAAGCTATAAATTTTTCCTTGGGTCCAAGATACTTACTCTCACGTTACCGGTTTGGTGACGAGAAATCAGGCGTGGTTTGATTGAAATGGCAGCGGAGGAGTACCGGGGTGGAAGAGAGAGAAAGTAGGCGGCACTGCAAGGAGAGAGAGAGAGACCGCGGCGGCGCTGGTAGAGAGAGAGAGATTGATTGAAACCGCGGCGGCGCTGAAGATGTCGCGGCGGTGCTCCACTTGCGAGGAAGGAGAAGAAGAAGAAGAAAGAAAGAAGAGAGTAGCGTCGGCGGAAGAAGAAGAAAGAAAGGAAAAAACCAGGGGGGGGGCGGCGGCACGCGAGGGAGAAGAGAAAAATCCCTTTTTACTGTTTTTTTTTGGCACGCAAATCGATGCCTATTTATAAAAACCCAAATTCCCTATTCCTTCCTCCTTTCCCCTTTTCTTTTCCAACCAAACAAAATAAAATCAAATAAAATCTTCTACAACCAAGATTTACTTCAATTATCCAATCCCACCAAAATTAATCACCTTATTTTACTTGCCCTAAGATAAAATTATCTTTTTTTTTTTTTTTATTTCAAGGGGAAATAAATTCTTTACTAAAATGTTACCAGCTGTTTAAAGTAAATATATTTATTCCAATTTTGACATTCCCTGCATTTTCTTTCATTTCAATCTTGTAAATGAGTGTACATTTGAAAAATAGTACACTTAAAAGATGGTGAAACTTACCATAATACTATAGTTTTTTTTTTTTTCAAAAAAAAAAGAAATAAAAACTCCACATCCACTTATATATACTCATTTTGTTTTCTAAATATATTTTTGATATTAAAAAAATATCGATGAATAGATTTGAACATTTGACCTCTTAGTTGAATGTAAATAGTTTTTATGTCAGTTGATTCTTATTCATGTCAGCTAATCATATTTTTTTAATCTTAAAAGAAAAACAAGTTGGGTGAATATGTGTCCAAATTCAAGTTTTGTGCATACGATAATACATCTTAAAATTAATTCATATAATTTATTTGTTTCTATTTTTTAATAGAAACCAATGTTAATTTTGTAA

mRNA sequence

ATGAACGAGATTCAAGCTGGAAAAATGGTGGAATTTGCCAGCGGTGTAAAAGGAATAGCCTTAAATCTTGAGAATGAGAATGTAGGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAGGAGATCTTGTCAAGCGCACTGGATCAATTGTGGATGTTCCTGCGGAAAAGGCTATGCTCGGGCGTGTGGTCGATGCGTTGGGAGTACCTATTGATGGAAGAGGGGCTAAACCAATGTTAATTTTGTAA

Coding sequence (CDS)

ATGAACGAGATTCAAGCTGGAAAAATGGTGGAATTTGCCAGCGGTGTAAAAGGAATAGCCTTAAATCTTGAGAATGAGAATGTAGGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAGGAGATCTTGTCAAGCGCACTGGATCAATTGTGGATGTTCCTGCGGAAAAGGCTATGCTCGGGCGTGTGGTCGATGCGTTGGGAGTACCTATTGATGGAAGAGGGGCTAAACCAATGTTAATTTTGTAA

Protein sequence

MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGAKPMLIL

Homology

[Close]

BLAST of CcUC11G212220 vs. NCBI nr
Match: AAQ74488.1 (F1-ATPase alpha subunit, partial [Trichopus sempervirens])

HSP 1 Score: 144.8 bits (364), Expect = 3.3e-31
Identity = 74/78 (94.87%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
          +NEIQAG+MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 2  LNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 61

Query: 61 LGRVVDALGVPIDGRGAK 79
          LGRVVDALGVPIDGRGA+
Sbjct: 62 LGRVVDALGVPIDGRGAR 79

[Close]

BLAST of CcUC11G212220 vs. NCBI nr
Match: AER11591.1 (F1-ATPase alpha subunit, partial [Trichopus sempervirens])

HSP 1 Score: 144.8 bits (364), Expect = 3.3e-31
Identity = 74/78 (94.87%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
          +NEIQAG+MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 1  LNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 60

Query: 61 LGRVVDALGVPIDGRGAK 79
          LGRVVDALGVPIDGRGA+
Sbjct: 61 LGRVVDALGVPIDGRGAR 78

[Close]

BLAST of CcUC11G212220 vs. NCBI nr
Match: AAM12438.1 (ATP synthase alpha subunit, partial [Enkianthus campanulatus])

HSP 1 Score: 144.4 bits (363), Expect = 4.3e-31
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
          +NEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 16 LNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 75

Query: 61 LGRVVDALGVPIDGRGA 78
          LGRVVDALGVPIDGRG+
Sbjct: 76 LGRVVDALGVPIDGRGS 92

[Close]

BLAST of CcUC11G212220 vs. NCBI nr
Match: AAM12462.1 (ATP synthase alpha subunit, partial [Styrax officinalis])

HSP 1 Score: 144.4 bits (363), Expect = 4.3e-31
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
          +NEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 16 LNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 75

Query: 61 LGRVVDALGVPIDGRGA 78
          LGRVVDALGVPIDGRG+
Sbjct: 76 LGRVVDALGVPIDGRGS 92

[Close]

BLAST of CcUC11G212220 vs. NCBI nr
Match: ABY66747.1 (atp1, partial [Kallstroemia parviflora])

HSP 1 Score: 144.1 bits (362), Expect = 5.6e-31
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
          +NEIQAG+MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 10 LNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 69

Query: 61 LGRVVDALGVPIDGRGA 78
          LGRVVDALGVPIDGRGA
Sbjct: 70 LGRVVDALGVPIDGRGA 86

[Close]

BLAST of CcUC11G212220 vs. ExPASy Swiss-Prot
Match: Q06735 (ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris OX=161934 GN=ATPA PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.3e-34
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
           +NEIQAG+MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 46  LNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 105

Query: 61  LGRVVDALGVPIDGRGA 78
           LGRVVDALGVPIDGRGA
Sbjct: 106 LGRVVDALGVPIDGRGA 122

[Close]

BLAST of CcUC11G212220 vs. ExPASy Swiss-Prot
Match: P18260 (ATP synthase subunit alpha, mitochondrial OS=Helianthus annuus OX=4232 GN=ATPA PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.3e-34
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
           +NEIQAG+MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 46  LNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 105

Query: 61  LGRVVDALGVPIDGRGA 78
           LGRVVDALGVPIDGRGA
Sbjct: 106 LGRVVDALGVPIDGRGA 122

[Close]

BLAST of CcUC11G212220 vs. ExPASy Swiss-Prot
Match: P24459 (ATP synthase subunit alpha, mitochondrial OS=Phaseolus vulgaris OX=3885 GN=ATPA PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.3e-34
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
           +NEIQAG+MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 46  LNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 105

Query: 61  LGRVVDALGVPIDGRGA 78
           LGRVVDALGVPIDGRGA
Sbjct: 106 LGRVVDALGVPIDGRGA 122

[Close]

BLAST of CcUC11G212220 vs. ExPASy Swiss-Prot
Match: Q01915 (ATP synthase subunit alpha, mitochondrial OS=Glycine max OX=3847 GN=ATPA PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.3e-34
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
           +NEIQAG+MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 46  LNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 105

Query: 61  LGRVVDALGVPIDGRGA 78
           LGRVVDALGVPIDGRGA
Sbjct: 106 LGRVVDALGVPIDGRGA 122

[Close]

BLAST of CcUC11G212220 vs. ExPASy Swiss-Prot
Match: P05494 (ATP synthase subunit alpha, mitochondrial OS=Zea mays OX=4577 GN=ATPA PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.6e-33
Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
           +NEIQAG+MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 46  LNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 105

Query: 61  LGRVVDALGVPIDGRGA 78
           LGRVVDALGVPIDG+GA
Sbjct: 106 LGRVVDALGVPIDGKGA 122

[Close]

BLAST of CcUC11G212220 vs. ExPASy TrEMBL
Match: Q5VL79 (ATP synthase subunit alpha (Fragment) OS=Trichopus sempervirens OX=167580 GN=atpA PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31
Identity = 74/78 (94.87%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
          +NEIQAG+MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 2  LNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 61

Query: 61 LGRVVDALGVPIDGRGAK 79
          LGRVVDALGVPIDGRGA+
Sbjct: 62 LGRVVDALGVPIDGRGAR 79

[Close]

BLAST of CcUC11G212220 vs. ExPASy TrEMBL
Match: G9JKI3 (ATP synthase subunit alpha (Fragment) OS=Trichopus sempervirens OX=167580 GN=atpA PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31
Identity = 74/78 (94.87%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
          +NEIQAG+MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 1  LNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 60

Query: 61 LGRVVDALGVPIDGRGAK 79
          LGRVVDALGVPIDGRGA+
Sbjct: 61 LGRVVDALGVPIDGRGAR 78

[Close]

BLAST of CcUC11G212220 vs. ExPASy TrEMBL
Match: Q8SIC8 (ATP synthase subunit alpha (Fragment) OS=Styrax officinalis OX=153544 GN=atp1 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.1e-31
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
          +NEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 16 LNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 75

Query: 61 LGRVVDALGVPIDGRGA 78
          LGRVVDALGVPIDGRG+
Sbjct: 76 LGRVVDALGVPIDGRGS 92

[Close]

BLAST of CcUC11G212220 vs. ExPASy TrEMBL
Match: Q8SIF2 (ATP synthase subunit alpha (Fragment) OS=Enkianthus campanulatus OX=13508 GN=atp1 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.1e-31
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
          +NEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 16 LNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 75

Query: 61 LGRVVDALGVPIDGRGA 78
          LGRVVDALGVPIDGRG+
Sbjct: 76 LGRVVDALGVPIDGRGS 92

[Close]

BLAST of CcUC11G212220 vs. ExPASy TrEMBL
Match: Q9XPB2 (ATP synthase subunit alpha OS=Vigna radiata var. radiata OX=3916 GN=atp alpha PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
           +NEIQAG+MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 46  LNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 105

Query: 61  LGRVVDALGVPIDGRGA 78
           LGRVVDALGVPIDGRGA
Sbjct: 106 LGRVVDALGVPIDGRGA 122

[Close]

BLAST of CcUC11G212220 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 135.2 bits (339), Expect = 2.4e-32
Identity = 68/77 (88.31%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1   MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
           +NEIQAG+MV FA+GVKG+ALNLENENVGIVVFG DTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 316 LNEIQAGEMVLFANGVKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAM 375

Query: 61  LGRVVDALGVPIDGRGA 78
           LGRVVDA+GVPIDG+GA
Sbjct: 376 LGRVVDAMGVPIDGKGA 392

[Close]

BLAST of CcUC11G212220 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 135.2 bits (339), Expect = 2.4e-32
Identity = 68/77 (88.31%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1   MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
           +NEIQAG+MV FA+GVKG+ALNLENENVGIVVFG DTAIKEGDLVKRTGSIVDVPA KAM
Sbjct: 46  LNEIQAGEMVLFANGVKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAM 105

Query: 61  LGRVVDALGVPIDGRGA 78
           LGRVVDA+GVPIDG+GA
Sbjct: 106 LGRVVDAMGVPIDGKGA 122

[Close]

BLAST of CcUC11G212220 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha )

HSP 1 Score: 86.7 bits (213), Expect = 9.9e-18
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 1   MNEIQAGKMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAEKAM 60
           ++E+ AG++VEF  G  GIALNLE+ NVG+V+ G    I+EG  VK TG I  +P  +A 
Sbjct: 45  LDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAY 104

Query: 61  LGRVVDALGVPIDGRG 77
           LGRV++AL  PIDGRG
Sbjct: 105 LGRVINALANPIDGRG 120

The following BLAST results are available for this feature:

BLAST of CcUC11G212220 vs. NCBI nr


Match Name	E-value	Identity	Description
AAQ74488.1	3.3e-31	94.87	F1-ATPase alpha subunit, partial [Trichopus sempervirens]	[more]
AER11591.1	3.3e-31	94.87	F1-ATPase alpha subunit, partial [Trichopus sempervirens]	[more]
AAM12438.1	4.3e-31	96.10	ATP synthase alpha subunit, partial [Enkianthus campanulatus]	[more]
AAM12462.1	4.3e-31	96.10	ATP synthase alpha subunit, partial [Styrax officinalis]	[more]
ABY66747.1	5.6e-31	96.10	atp1, partial [Kallstroemia parviflora]	[more]

BLAST of CcUC11G212220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q06735	7.3e-34	96.10	ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris OX=161934 GN=ATPA PE=...	[more]
P18260	7.3e-34	96.10	ATP synthase subunit alpha, mitochondrial OS=Helianthus annuus OX=4232 GN=ATPA P...	[more]
P24459	7.3e-34	96.10	ATP synthase subunit alpha, mitochondrial OS=Phaseolus vulgaris OX=3885 GN=ATPA ...	[more]
Q01915	7.3e-34	96.10	ATP synthase subunit alpha, mitochondrial OS=Glycine max OX=3847 GN=ATPA PE=3 SV...	[more]
P05494	1.6e-33	94.81	ATP synthase subunit alpha, mitochondrial OS=Zea mays OX=4577 GN=ATPA PE=3 SV=1	[more]

BLAST of CcUC11G212220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q5VL79	1.6e-31	94.87	ATP synthase subunit alpha (Fragment) OS=Trichopus sempervirens OX=167580 GN=atp...	[more]
G9JKI3	1.6e-31	94.87	ATP synthase subunit alpha (Fragment) OS=Trichopus sempervirens OX=167580 GN=atp...	[more]
Q8SIC8	2.1e-31	96.10	ATP synthase subunit alpha (Fragment) OS=Styrax officinalis OX=153544 GN=atp1 PE...	[more]
Q8SIF2	2.1e-31	96.10	ATP synthase subunit alpha (Fragment) OS=Enkianthus campanulatus OX=13508 GN=atp...	[more]
Q9XPB2	2.7e-31	96.10	ATP synthase subunit alpha OS=Vigna radiata var. radiata OX=3916 GN=atp alpha PE...	[more]

BLAST of CcUC11G212220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07698.1	2.4e-32	88.31	ATPase, F1 complex, alpha subunit protein	[more]
ATMG01190.1	2.4e-32	88.31	ATP synthase subunit 1	[more]
ATCG00120.1	9.9e-18	53.95	ATP synthase subunit alpha	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	PFAM	PF02874	ATP-synt_ab_N	coord: 1..49 e-value: 1.8E-12 score: 47.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 46..81 e-value: 9.8E-7 score: 30.2
IPR023366	ATP synthase subunit alpha, N-terminal domain-like superfamily	GENE3D	2.40.30.20		coord: 1..45 e-value: 2.0E-19 score: 71.2
None	No IPR available	PANTHER	PTHR48082:SF2	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	coord: 1..77
None	No IPR available	PANTHER	PTHR48082	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	coord: 1..77
IPR036121	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	SUPERFAMILY	50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase	coord: 2..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G212220.1	CcUC11G212220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0046034	ATP metabolic process
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism