CcUC11G211280 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC11G211280
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr11: 3240833 .. 3246608 (-)
RNA-Seq ExpressionCcUC11G211280
SyntenyCcUC11G211280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTTAACAGTAGCTGCAAGAATCGAATTCATATCTCGGCTAAGTTTTGAAGTTTTGAGTTAGGTATGCGTTCTTAGATATATATATATATTTTTGGGTTCATCTATTTATTGTGGGGTTTATGGGGTTGATTTTAGTTGCCTAATGTTGTAGTACAGAATCTATTTCTATGACTGGAGAATGAACTGTTGTGGATGTTTATGAGGCTGTCCAGAATGTTTAACTAATATCTACTATTATTCATGATCGTTTATTGGTTTTTTTAGATACCCGTTTCCAGCAGAACACACCCCACCCCATGGCAGCATGCTGATGTTTACTGTAACTTGGGAAGTTCATATATTGCACAGTTATGTGTTTAGATCATACATGCTTATAAACAATAGAACTTTCAAGGGAGGAGGGGAATTCAAACTCATCTCAGGGGATGTCTCGCAATTATGTTGAGCTTCAGTTTTCTGTTACCTGAAAATGAGCTTTAATTTGCAAGTTTCGTTCTCTTGCCTACTGCATTTTGAACTCCGACATTTGTTTTTGCATTCTTTATTTTAAATTCGGGAATGGTGATTTAAAAGTGATCAAGAGTTCAGCTTTAGGGTATACAATATGAAAATATCCATTGAAATTGGGATCTGCTTATCCTCATTAAAATGATCCCTGGTCAATCAAGACTCGAGTACTTATTGATGTCCCATCCTTATCAATCCACACTCTGGAGTAATGTGGAATACAAGAAACAAAATGAACAAGCCCAAATTCTAGCTTAGTTTACTAGCATTTCTCAGCTGCAGATCCCCCATTGGTACTAGTCTCCATCTCTAGAACTTGTTTGGGTTTCTGTGGCTTATACCATATTGCACAAACTAAAAATGCTACAATATTTATGCCACTTAGTATGGCAAGAAGTCCATAGAAACAATCGAGCCTAGCATAATTTATGTTGTCTGCCAGCCATCCCTGTCCATCCTTGCTTCCCGTCACCCTCTTCACAACTGCAACCAAAAAACTACTAACAAAGAACCCAAGTGACAAAGTTGTGAGGAAGAGGCCAGTGCTCATAGTTTTCATTCCCTTTGGGGATTGTGTTATGAAGAAATCAAGCTGGCCAGTATAGATGAAAGCTTCTCCAGAGCCTACCAAGAAGAATTGAGGAATCAGTAGGAACACACTTAAAGGCAAAGTTGCAGTGGATCTACCCACAGCTTTAGCCACTGAGAGCCGTTTCATCTCGGCTAAAGCTGCAGCTGCCATTCCAAAAGTTGACAAGATAAGACCTATGGCAATCCTCTGTAGGTTTGTAAAACCTGTGAAGAAAAGGGGCGAATCATGTTTCCGAAAATTCTAATACGTAAATAAACTGCTTCCTAACCTGAAGGTAATTTAATATTTTCTTTCCCCCGCAATATATAGGTTCTTAAACTTTGCAACCTTCAATAAAGTTTTGATAATTCAATGGAAATTCATTCCGGTTCTTTTATGTATATGATATCTATGCTTATTAGAAAATTACCTTCATTTCCTAATGTTACTACTAACAGTCCCAAAACTTTTAATTTTTTGGGCTCAGACAGATCAAATATTCTAAAAAAACTTTAGAGATGACAAAATTTCTGACTGTAAACCAACCTGAATGGGGGAATCTCGGTTAGACTGGGAACATGGTCAGAAATAGAGGGTTTAAGATTTTTTTCTCCGAGCTAATTTCGAGAATGGGAATGGATGATAATGTGAATATTCCATATTTACCTGGTTGCCCTTTCCATTTCTTCCAAAGAGGCATGATAAGGCGGTCATAAAAGGCCAGTGTGATCAATATGGCTGCCACAAAGAAAACAGTTAGAGAGCCGGCAGGGATTTGGAAATTTCCTAACGATCTTTCCATGGTGGATGCCTGCACCACTGAGAAAGTGATCATCTGAGCATATGTAGTCCAGAAGATTATGGTTGTGGCCCATATTGGTAGCAGTCTCATCATCATCTTTACCTCCTCTACCCTTGTTACTGAGCAGAGCTTCCAGGGATTGGGAGCTGAGCTTACAGATTTATCAAAATCTCCCTCTGCAACAATTGCAGCCTTGTCCAGAAATCTAGAAAGTAAAAGAAATCAATAGCCTCTAAAAACTAATCACCCTTGTCCAAATTCTGATTTATAGAATGTTCCTTTTAAATCAATAACTTGTTAAATGTTGTCATAGATTTGCATTTCGATTTTAATGTATGTGTAAAGGTTAATTCAAGTATGTTTAGTTAGGCCAAAAAATCACTTACTGGAATTGATTTGTGTGATCTATTCTTGAGGTTGCAGCAGAATCTTCATATAGCAAAGTAGCATTGAGTTGAAGTTCCATCTTCCTCTTGTTTATTGCTGCAGCAATGACCTGGAAGATATGAACTATTGGACTTCCCATGCTTTTCTTGTATCGGTATCTCTTAGTACCACTCAGGAATATTAAAATTGCTGTGAACATTGAAACAGAACAAATTCCATAAGCCCAACTGCGGCCCACTTCATCTTGCAAGTAAACAAGCACTGTCACTGCTAACAAAGTCCCACTGCTGACAAACAAAAAAAATCTGTTGAAGAAATATGCCATTTGAGCCTTCTCCTTGTCATCTTTCTCGTCGAATTGGTCGGTCCCAAATCCCGAAACACTGGATTTGATACCCCCAGTTCCTAGAGCAATTAGATACAGAGGCAAATAAATCATTCCCATTTGAAACCCATTTGCTTGTTTGCAGTTCTTGCTGGCACTAGAATGGCAAGGAGGTGGATGTAGTTGTGGTAGCTTTGTTATTACTGCTAGAGCCCCAGTTCCCTAGTTCATTTTAGCAAGTATGGTTGAGTTATGAAAAGTTAAGATTGTCGAATGTTTAACGGAAGAAAATCTATAATTACCAGTGTCTGTATTGAGGCAAAGATTGCTATTGTCTTATATCTTCCAAGGAAAGAATCTGCCAGAAAACCTCCAAGCAAGCAAAGGAGGAAACATGTACCCATGAAATCTGTGACAATGTTGGCTGAAGTTGCACTAGGCAGATGCAATGTTCCCACCAAGTAAGTCACCAGATTTACAGCTATTCCCATTGTTGAAAGTCTTTCACATAGTTCTATCCCTGTCCAAGATTTAATGAGCTTGATTCATTCTGTAGCAAAAATTCCATCTTCTCTCTTTAATGATTTTATCTTTTGTCTGGTTATGATTTTCTTGGGGAAACAAGAACCAAATTTCACACCAGAAGGAGAACTTTTTGTGCAGCTAGGAAATGTGAGCAGGAATTCAATATTCTTTCTTTTGTAGAAAGTGGAGTATAATTGAAGATGGGCAAAATTAGTTACAATTAAATATGTGTGAAAGTTCCAGCTAGAACATTTGTCCTTTTCCCATACTCGGTTGTCTGAATAATAATGTCATGGACAGAATTATTTGAAGTTGTCTATGGCTTTGGTTGCTCTTTAGGGTCCCATCCTCTCACTTCAAGAAATGGTAAAATATTGATTTGAACTGGGATTGACCAGGCTCTGAATGCTGAATGTGCTAAAGATGTATCCTAATCGAAACTTCATTTAACGTAAAATCCTATCTATCATGATTAAGATCATCATTTTTTAAGTGGGTCATCCTTCTAAAACATCTCATAAATACCATGGCTATGACTTGAACCCGCAAATGTAGCTGTTCATAATAGTTACATTGATCATGAAACTCATTCAAACGTTTCTCAAAACTGGATTAGCTATGTTTTTCAGTTCAGACAAGAGAAGAATTTGTAGTTCTTGATGATCTAATACTACCTATAGTCCAGACTAGATAGATAGGTGAGATATGGGAACATGTCAAACTCTTCTCTAAGACAGACAACCTTTTATTTACATTCTTAAAGCTGGTTTTGGTTTCAGTTACCAGAAACACTCCAAGGAGGGGTGCATCAGAGAGATAAGACAAAATGTAGTACCTACGATAAGAGCAGCGGTGGCCCAACCACCGGTTTTAGACCGGTTTGCCGGACACCCTTTGTAGTCCACTGCATCAGCAACTGTTAAACTCTGCTTGCCATCCTGTAGCCATTGAGATAGTTACTTAGAAAGAAGAAATATTTGAATCTTATCGATCCTATTTTGAATACTGTAAGGAACTAACCATTCTTTTGGTAGAGAATGTAAGGTAAGAAGTAAGCCTTATGGTGCTTCTGCTTCAGCTATTCTCCAATTTGGTTTGTTTATGCATTGGTGGGAACTTCCCATTATATAGACATTTCTTGGCAAATTAGTTAATCAATGAAAGTATGAACCTCTACAAGATTGAGACAGGTCATATTTGGTCATGATGAAGTTGGAGGTCAGTTTCGTCATATTGCTCGTTTAAACTTTGTTTCTTTTAAGAATGACTTTTATCAAAAAAAAGATCAAGGGGAATGTGTAAAGAAGAGATTGATTGCAAAGGCTAGACGACAGGATAATGGGAATCTCAAACATGAAAAACCAATAGCTTTTTCCTTCTCTATTCGTTCTATCAGGTAAGATTGAGTTTGATTTTGCAGATTGTGAAATCAACGACAATCAAGCCTTCCTGTGAGTGCTTTTGCTACCCCACTCCAGTAGCCAAATCCCTCTGCCTTTGTTCTTCTATTGCTCGACCCGAGCAAATAAGGAAAGACACGTTCCATCGCGAGGTAAGAATGATCACTGGAGTGGTTATGACTTTTACATTGAGACATTTTTTCAAGTACTTAGGAAGTCACTCCAAACAGACTAGACTCAGATGTGGTGTATAATGTGTCAGAAATTTTGATATTGATTTGATTCACATGTTCTTTTGGAGGGGGGTTAATAACTTTTTAGTTAATGAGTTTTAAGTAGTTCTAATTGGTTATGTAGTTTTTATGGTAGTTAAAAGAGGTGCTTCGTGAAGTAAAAGAAGAAAAGGGGAAAAACTATGTTTAGTATAATTTTTTTAAAGCAGTTAAAAAAATCATTTCGAACACCACTAACACTACATAGTTAGTGTTAGGGTTAATTGTATTGTTTGTCCATAATATTAGGCCAAAATGAGATTTGACTCGACTCTTATAACCTTTTGGTTACCTAAGCAAATATATTTTTTATTATTATTTTCTCTCATCTCTCTTGCTGCCTCAATCCCTCTCTCAGCGGGGCTCATCATTCTCCTTGTCTTCTCCTCCATGCCTCTTCTCCTTTACTTCATATGTGAAAGTAGTATGAAAGAAATTCAGATGTGGAAAATTTCAAATTTGGAAGGCAATGGCCCTTAGTGGGACGATTAGTAGCAGTAATGGCGGTGAGAAGATATGAAGAAGAAGTGGCAGAGCGAATGAACAAGCATTAGAGCATGAAAAACGAGCAAGAGCAGTGAGCGAGATCCAGAAAAATATTTACGAACGTCAACAAAAGGTTGACAAAAAAAAAAAAAAACTTGATCGCGTGAAACCAAGTCAAATCTCATTTCCGCGAATTTTTTAGGCATCCATAGAAATCTCCCTATAATTCAAGGCATGCATATCATAGTTGTTTTGTATTTCTTACACATTTAAAATGGTTTTTACAATGTTCACACTGTTGGTTTCACCTCTTCAGGTAGTAGAATGTTATATTTGAGGACATAAAAATATGAAAAAGAAGGAGAAAGTTGTATGTGATGAGAACTATATGTAGGGTCATATAAAGTTGTACAAGTATATCTTTTCATGACAGTTGGAAGCATTGTTTATTATTATGGCCATGTGAGAATCAGATCATATCATTTTAAGTCAGAC

mRNA sequence

ATGATATACCCGTTTCCAGCAGAACACACCCCACCCCATGGCAGCATGCTGATGAACACACTTAAAGGCAAAGTTGCAGTGGATCTACCCACAGCTTTAGCCACTGAGAGCCGTTTCATCTCGGCTAAAGCTGCAGCTGCCATTCCAAAAGTTGACAAGATAAGACCTATGGCAATCCTCTGTAGGTTTATTGTGAAATCAACGACAATCAAGCCTTCCTGTGAGTGCTTTTGCTACCCCACTCCAGTAGCCAAATCCCTCTGCCTTTGTTCTTCTATTGCTCGACCCGAGCAAATAAGGAAAGACACGTTCCATCGCGAGCGGGGCTCATCATTCTCCTTGTCTTCTCCTCCATGCCTCTTCTCCTTTACTTCATATGTGAAAGTAGTATGAAAGAAATTCAGATGTGGAAAATTTCAAATTTGGAAGGCAATGGCCCTTAGTGGGACGATTAGTAGCAGTAATGGCGGTGAGAAGATATGAAGAAGAAGTGGCAGAGCGAATGAACAAGCATTAGAGCATGAAAAACGAGCAAGAGCAGTGAGCGAGATCCAGAAAAATATTTACGAACGTCAACAAAAGGTTGACAAAAAAAAAAAAAAACTTGATCGCGTGAAACCAAGTCAAATCTCATTTCCGCGAATTTTTTAGGCATCCATAGAAATCTCCCTATAATTCAAGGCATGCATATCATAGTTGTTTTGTATTTCTTACACATTTAAAATGGTTTTTACAATGTTCACACTGTTGGTTTCACCTCTTCAGGTAGTAGAATGTTATATTTGAGGACATAAAAATATGAAAAAGAAGGAGAAAGTTGTATGTGATGAGAACTATATGTAGGGTCATATAAAGTTGTACAAGTATATCTTTTCATGACAGTTGGAAGCATTGTTTATTATTATGGCCATGTGAGAATCAGATCATATCATTTTAAGTCAGAC

Coding sequence (CDS)

ATGATATACCCGTTTCCAGCAGAACACACCCCACCCCATGGCAGCATGCTGATGAACACACTTAAAGGCAAAGTTGCAGTGGATCTACCCACAGCTTTAGCCACTGAGAGCCGTTTCATCTCGGCTAAAGCTGCAGCTGCCATTCCAAAAGTTGACAAGATAAGACCTATGGCAATCCTCTGTAGGTTTATTGTGAAATCAACGACAATCAAGCCTTCCTGTGAGTGCTTTTGCTACCCCACTCCAGTAGCCAAATCCCTCTGCCTTTGTTCTTCTATTGCTCGACCCGAGCAAATAAGGAAAGACACGTTCCATCGCGAGCGGGGCTCATCATTCTCCTTGTCTTCTCCTCCATGCCTCTTCTCCTTTACTTCATATGTGAAAGTAGTATGA

Protein sequence

MIYPFPAEHTPPHGSMLMNTLKGKVAVDLPTALATESRFISAKAAAAIPKVDKIRPMAILCRFIVKSTTIKPSCECFCYPTPVAKSLCLCSSIARPEQIRKDTFHRERGSSFSLSSPPCLFSFTSYVKVV
Homology
[Close]
BLAST of CcUC11G211280 vs. NCBI nr
Match: RWW28438.1 (hypothetical protein GW17_00007083 [Ensete ventricosum])

HSP 1 Score: 55.8 bits (133), Expect = 3.1e-04
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 18  MNTLKGKVAVDLPTALATESRFISAKAAAAIPKVDKIRPMAILCRFIVKSTTIKPSCEC 77
           + TL G V V L  + ATESRF SA AAA IP ++K+RP+ ILCR +VK T  K S  C
Sbjct: 120 VKTLMGSVVVPLGASRATESRFTSASAAATIPMIEKLRPIPILCR-LVKPTWRKQSMHC 177

[Close]
BLAST of CcUC11G211280 vs. ExPASy TrEMBL
Match: A0A2N9IA49 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48811 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.2e-05
Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 0 

Query: 8  EHTPPHGSMLMNTLKGKVAVDLPTALATESRFISAKAAAAIPKVDKIRPMAILCRFI 65
          E T  +  +   TL GK+ V  PTA AT++RF+S +AAAAIPKVD+  P+AILC F+
Sbjct: 15 EPTKKNCGIKRKTLIGKLEVVRPTAFATDNRFLSHRAAAAIPKVDRTSPIAILCNFV 71

[Close]
BLAST of CcUC11G211280 vs. ExPASy TrEMBL
Match: A0A444G0P2 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00007083 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 18  MNTLKGKVAVDLPTALATESRFISAKAAAAIPKVDKIRPMAILCRFIVKSTTIKPSCEC 77
           + TL G V V L  + ATESRF SA AAA IP ++K+RP+ ILCR +VK T  K S  C
Sbjct: 120 VKTLMGSVVVPLGASRATESRFTSASAAATIPMIEKLRPIPILCR-LVKPTWRKQSMHC 177

The following BLAST results are available for this feature:
BLAST of CcUC11G211280 vs. NCBI nr
Match NameE-valueIdentityDescription
RWW28438.13.1e-0454.24hypothetical protein GW17_00007083 [Ensete ventricosum][more]
BLAST of CcUC11G211280 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC11G211280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2N9IA495.2e-0552.63Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48811 PE=4 SV=1[more]
A0A444G0P21.5e-0454.24Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00007083 PE=4 SV=1[more]
BLAST of CcUC11G211280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC11G211280.1CcUC11G211280.1mRNA