CcUC11G210450 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G210450
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	E3 ubiquitin-protein ligase RNF181-like
Location	CicolChr11: 2334538 .. 2334906 (+)
RNA-Seq Expression	CcUC11G210450
Synteny	CcUC11G210450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACAGTCTTGCCTGTAACAACAACATCAGCTAATTATGCAGCCAGTTACATCATGGACATTGAATCAATGTTCGATCTCGACACAGTCCTCACCGGAGCCGACGACTTCTATTACAACGACAACGTTGTAGCGCCACCATCCGTGGTGGTCGCCGACATGCCAACGGTGGCTGTTGAGGACGTATGTGCGGTTTGCATGGAGGATTTCCTGCCGGACGAAGGCGGTAAACAGATCGCCTGCGGGCATGTGTACCATCAATCTTGTATATCCTCTTGGCTCTCCGTCGGCGACTCTTGCCCTCTTTGCCGCCGTCATATCTCCTCCGGTGACAAAAGGGAGGCGCCTAAAACCGTACAAGTTTAG

mRNA sequence

ATGGCCACAGTCTTGCCTGTAACAACAACATCAGCTAATTATGCAGCCAGTTACATCATGGACATTGAATCAATGTTCGATCTCGACACAGTCCTCACCGGAGCCGACGACTTCTATTACAACGACAACGTTGTAGCGCCACCATCCGTGGTGGTCGCCGACATGCCAACGGTGGCTGTTGAGGACGTATGTGCGGTTTGCATGGAGGATTTCCTGCCGGACGAAGGCGGTAAACAGATCGCCTGCGGGCATGTGTACCATCAATCTTGTATATCCTCTTGGCTCTCCGTCGGCGACTCTTGCCCTCTTTGCCGCCGTCATATCTCCTCCGGTGACAAAAGGGAGGCGCCTAAAACCGTACAAGTTTAG

Coding sequence (CDS)

ATGGCCACAGTCTTGCCTGTAACAACAACATCAGCTAATTATGCAGCCAGTTACATCATGGACATTGAATCAATGTTCGATCTCGACACAGTCCTCACCGGAGCCGACGACTTCTATTACAACGACAACGTTGTAGCGCCACCATCCGTGGTGGTCGCCGACATGCCAACGGTGGCTGTTGAGGACGTATGTGCGGTTTGCATGGAGGATTTCCTGCCGGACGAAGGCGGTAAACAGATCGCCTGCGGGCATGTGTACCATCAATCTTGTATATCCTCTTGGCTCTCCGTCGGCGACTCTTGCCCTCTTTGCCGCCGTCATATCTCCTCCGGTGACAAAAGGGAGGCGCCTAAAACCGTACAAGTTTAG

Protein sequence

MATVLPVTTTSANYAASYIMDIESMFDLDTVLTGADDFYYNDNVVAPPSVVVADMPTVAVEDVCAVCMEDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTVQV

Homology

[Close]

BLAST of CcUC11G210450 vs. NCBI nr
Match: XP_038877426.1 (E3 ubiquitin-protein ligase RNF126-like [Benincasa hispida])

HSP 1 Score: 204.9 bits (520), Expect = 3.9e-49
Identity = 100/122 (81.97%), Postives = 109/122 (89.34%), Query Frame = 0


Query: 1   MATVLPVTTTSANYAASYIMDIESMFDLDTVLTGADDFYYNDNVVAPPSVVVADMPTVAV 60
           MATVLP TT++  YAASYIMDIESMFDLDTVLTGADDFYYN  VVAPP VVVAD+PTVA 
Sbjct: 1   MATVLPETTSA--YAASYIMDIESMFDLDTVLTGADDFYYNKTVVAPPPVVVADLPTVAG 60

Query: 61  EDVCAVCMEDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTV 120
           +DVCAVC+EDFLPDE GKQI CGHVYHQSC+SSWLSVGDSCPLCRRHI+S ++ EAPKT 
Sbjct: 61  KDVCAVCIEDFLPDESGKQIPCGHVYHQSCLSSWLSVGDSCPLCRRHIASDEEMEAPKTE 120

Query: 121 QV 123
            V
Sbjct: 121 TV 120

[Close]

BLAST of CcUC11G210450 vs. NCBI nr
Match: KAA0061529.1 (RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 3.3e-48
Identity = 95/113 (84.07%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 10  TSANYAASYIMDIESMFDLDTVLTGADDFYYNDNVVAPPSVVVADMPTVAVEDVCAVCME 69
           TSAN+AA YIMDIESMFDLDTVL+GADDFYY    VAPP VVVAD+PTVA +D CAVCME
Sbjct: 3   TSANHAARYIMDIESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATDDACAVCME 62

Query: 70  DFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTVQV 123
           DFLPDEGGKQI CGHVYHQSCISSWLSVGDSCPLCRRHI+ GDK E  KTVQV
Sbjct: 63  DFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 115

[Close]

BLAST of CcUC11G210450 vs. NCBI nr
Match: XP_011650093.1 (E3 ubiquitin-protein ligase RNF115 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 2.4e-46
Identity = 94/114 (82.46%), Postives = 101/114 (88.60%), Query Frame = 0


Query: 10  TSANYAASYIMDIESMFDLDTVLTGADDFYYNDNVVAPPSVVVADMPTV-AVEDVCAVCM 69
           TSANYAASYIMDIESMFDLDTVLTGADDFYY   VVAPP V+VA++PTV A +DVCAVCM
Sbjct: 3   TSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCM 62

Query: 70  EDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTVQV 123
           EDFLPDEGGKQI CGHVYHQSC+SSWLS+ DSCPLCR HI+ GDK E  KTVQV
Sbjct: 63  EDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116

[Close]

BLAST of CcUC11G210450 vs. NCBI nr
Match: KAE8651508.1 (hypothetical protein Csa_019333 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 1.0e-44
Identity = 91/111 (81.98%), Postives = 98/111 (88.29%), Query Frame = 0


Query: 10  TSANYAASYIMDIESMFDLDTVLTGADDFYYNDNVVAPPSVVVADMPTV-AVEDVCAVCM 69
           TSANYAASYIMDIESMFDLDTVLTGADDFYY   VVAPP V+VA++PTV A +DVCAVCM
Sbjct: 3   TSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCM 62

Query: 70  EDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKT 120
           EDFLPDEGGKQI CGHVYHQSC+SSWLS+ DSCPLCR HI+ GDK E  KT
Sbjct: 63  EDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKT 113

[Close]

BLAST of CcUC11G210450 vs. NCBI nr
Match: XP_023537996.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.0 bits (463), Expect = 1.6e-42
Identity = 89/122 (72.95%), Postives = 100/122 (81.97%), Query Frame = 0


Query: 1   MATVLPVTTTSANYAASYIMDIESMFDLDTVLTGADDFYYNDNVVAPPSVVVADMPTVAV 60
           MA VLP  T SA +AASYIMD+ESMFDLDTVLTGADD+Y +  +  PPSVVVAD+PTV  
Sbjct: 1   MAAVLPEATRSA-FAASYIMDLESMFDLDTVLTGADDYYNDQIITEPPSVVVADLPTVVT 60

Query: 61  EDVCAVCMEDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTV 120
           +DVCAVCME+F  DEGGKQI CGHVYHQ+CISSWLSVGD CPLCR H+SS +K E  K V
Sbjct: 61  DDVCAVCMEEFRADEGGKQIPCGHVYHQTCISSWLSVGDCCPLCRCHVSSDNKSETAKPV 120

Query: 121 QV 123
           QV
Sbjct: 121 QV 121

[Close]

BLAST of CcUC11G210450 vs. ExPASy Swiss-Prot
Match: Q91YL2 (E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.1e-09
Identity = 31/97 (31.96%), Postives = 48/97 (49.48%), Query Frame = 0


Query: 28  LDTVLTGADDFYYNDNVVAPPSVVVADMPTVAVED-------VCAVCMEDFLPDEGGKQI 87
           LDT++T   + + N          +  +PTV V +        C VC ED+   E  +Q+
Sbjct: 188 LDTIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQL 247

Query: 88  ACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAP 118
            C H++H SCI  WL   DSCP+CR+ ++  +    P
Sbjct: 248 PCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATNP 284

[Close]

BLAST of CcUC11G210450 vs. ExPASy Swiss-Prot
Match: Q9Y4L5 (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 5.4e-09
Identity = 30/89 (33.71%), Postives = 48/89 (53.93%), Query Frame = 0


Query: 42  DNVVAPPS--VVVADMPTVAV--EDV-----CAVCMEDFLPDEGGKQIACGHVYHQSCIS 101
           +N   PP+    +  +PTV V  E V     C VC ED+  +E  +Q+ C H +H SCI 
Sbjct: 197 ENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIV 256

Query: 102 SWLSVGDSCPLCRRHISSGDKREAPKTVQ 122
            WL + D+CP+CR+ ++  D     ++ +
Sbjct: 257 PWLELHDTCPVCRKSLNGEDSTRQSQSTE 285

[Close]

BLAST of CcUC11G210450 vs. ExPASy Swiss-Prot
Match: Q9D0C1 (E3 ubiquitin-protein ligase RNF115 OS=Mus musculus OX=10090 GN=Rnf115 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.2e-09
Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 0


Query: 42  DNVVAPPS--VVVADMPTVAV--EDV-----CAVCMEDFLPDEGGKQIACGHVYHQSCIS 101
           +N   PP+    +  +PTV V  E V     C VC ED+  +E  +Q+ C H +H SCI 
Sbjct: 198 ENTGPPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIV 257

Query: 102 SWLSVGDSCPLCRRHISSGD 113
            WL + D+CP+CR+ ++  D
Sbjct: 258 PWLELHDTCPVCRKSLNGED 277

[Close]

BLAST of CcUC11G210450 vs. ExPASy Swiss-Prot
Match: Q6DIP3 (E3 ubiquitin-protein ligase RNF126 OS=Xenopus tropicalis OX=8364 GN=rnf126 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08
Identity = 28/97 (28.87%), Postives = 48/97 (49.48%), Query Frame = 0


Query: 28  LDTVLTGADDFYYNDNVVAPPSVVVADMPTVAVED-------VCAVCMEDFLPDEGGKQI 87
           LDT++T   + + N       +  +  +PT+ + +        C VC ED+   E  +Q+
Sbjct: 184 LDTIITQLLNQFENTGPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESVRQL 243

Query: 88  ACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAP 118
            C H++H  CI  WL   D+CP+CR+ +S  +    P
Sbjct: 244 PCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATNP 280

[Close]

BLAST of CcUC11G210450 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08
Identity = 26/66 (39.39%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 52  VADMPTVAVEDV--CAVCMEDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHIS 111
           V  +PTV +E+V  C+VC++D       KQ+ C H +H SCI  WL +  SCP+CR  + 
Sbjct: 185 VEALPTVKIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELP 244

Query: 112 SGDKRE 116
           S + ++
Sbjct: 245 SEETKD 250

[Close]

BLAST of CcUC11G210450 vs. ExPASy TrEMBL
Match: A0A5A7V793 (RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00900 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 95/113 (84.07%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 10  TSANYAASYIMDIESMFDLDTVLTGADDFYYNDNVVAPPSVVVADMPTVAVEDVCAVCME 69
           TSAN+AA YIMDIESMFDLDTVL+GADDFYY    VAPP VVVAD+PTVA +D CAVCME
Sbjct: 3   TSANHAARYIMDIESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATDDACAVCME 62

Query: 70  DFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTVQV 123
           DFLPDEGGKQI CGHVYHQSCISSWLSVGDSCPLCRRHI+ GDK E  KTVQV
Sbjct: 63  DFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 115

[Close]

BLAST of CcUC11G210450 vs. ExPASy TrEMBL
Match: A0A0A0LEZ1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000920 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.2e-46
Identity = 94/114 (82.46%), Postives = 101/114 (88.60%), Query Frame = 0


Query: 10  TSANYAASYIMDIESMFDLDTVLTGADDFYYNDNVVAPPSVVVADMPTV-AVEDVCAVCM 69
           TSANYAASYIMDIESMFDLDTVLTGADDFYY   VVAPP V+VA++PTV A +DVCAVCM
Sbjct: 3   TSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCM 62

Query: 70  EDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTVQV 123
           EDFLPDEGGKQI CGHVYHQSC+SSWLS+ DSCPLCR HI+ GDK E  KTVQV
Sbjct: 63  EDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116

[Close]

BLAST of CcUC11G210450 vs. ExPASy TrEMBL
Match: A0A6J1HNM2 (E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita maxima OX=3661 GN=LOC111465331 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.9e-42
Identity = 92/124 (74.19%), Postives = 102/124 (82.26%), Query Frame = 0


Query: 1   MATVLPVTTTSANYAASYIMDIESMFDLDTVLTGADDFYYNDNVV--APPSVVVADMPTV 60
           MA VLP  T SA +AASYIMD+ESMFDLDTVLTGADD YYND ++   PPSVVV+D+PTV
Sbjct: 1   MAAVLPEATRSA-FAASYIMDLESMFDLDTVLTGADD-YYNDQMIITEPPSVVVSDLPTV 60

Query: 61  AVEDVCAVCMEDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPK 120
             +DVCAVCME+F  DEGGKQI CGHVYHQSCISSWLSVGD CPLCR H+SS +K E  K
Sbjct: 61  VTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDNKLETTK 120

Query: 121 TVQV 123
            VQV
Sbjct: 121 PVQV 122

[Close]

BLAST of CcUC11G210450 vs. ExPASy TrEMBL
Match: A0A6J1FDN7 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111444430 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 7.2e-41
Identity = 88/123 (71.54%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MATVLPVTTTSANYAASYIMDIESMFDLDTVLTGADDFYYNDNVVAPPSVVVADMPTVAV 60
           MA VLP  T SA +AA YIMD+ESMFDLDTVLTGADD+Y +  +  PPSVVVAD+PTV  
Sbjct: 1   MAAVLPEATRSA-FAARYIMDLESMFDLDTVLTGADDYYNDQIITEPPSVVVADLPTVVT 60

Query: 61  EDVCAVCMEDFLPDEGGKQIACGHVYHQSCISSWLSV-GDSCPLCRRHISSGDKREAPKT 120
           +DVCAVCME+F  DEGGKQI CGHVYHQ+CISSWLSV GD CPLCR H+SS +K E  K 
Sbjct: 61  DDVCAVCMEEFRADEGGKQIPCGHVYHQTCISSWLSVGGDCCPLCRCHVSSDNKSETAKP 120

Query: 121 VQV 123
           VQV
Sbjct: 121 VQV 122

[Close]

BLAST of CcUC11G210450 vs. ExPASy TrEMBL
Match: A0A6J1G511 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111450796 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 8.0e-24
Identity = 67/122 (54.92%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 1   MATVLPVTTTSANYAASYIMDIESMFDLDTVLTGADDFYYNDNVVAPPSVVVADMPTVAV 60
           MA V     T+ N AA+Y   IE +FDLD VL+GADDF      ++    +VAD+PTV V
Sbjct: 1   MAAVSVSAETTRNLAAAY--PIEFLFDLDMVLSGADDF--GCCQISASDSLVADLPTV-V 60

Query: 61  EDVCAVCMEDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTV 120
            DVCAVC+EDF PDE GKQI CGHVYH+SCISSWL+V + CPLCR  I +G   E+P + 
Sbjct: 61  ADVCAVCLEDFRPDEDGKQIPCGHVYHESCISSWLAVANCCPLCRCLI-AGQPPESPSST 116

Query: 121 QV 123
            +
Sbjct: 121 LI 116

[Close]

BLAST of CcUC11G210450 vs. TAIR 10
Match: AT1G68180.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 7.0e-12
Identity = 29/68 (42.65%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 44  VVAPPSVVVADMPTVAVEDVCAVCMEDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPL 103
           + A  +V++ D   V  E VCA+C E+F   E GK++ C H+YH SCI SWL++ ++CP+
Sbjct: 119 IEAVRTVIITDEDLVK-EKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPI 178

Query: 104 CRRHISSG 112
           CR  ++ G
Sbjct: 179 CRFEVNLG 185

[Close]

BLAST of CcUC11G210450 vs. TAIR 10
Match: AT3G60080.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 3.8e-10
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 63  VCAVCMEDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCR 106
           +CAVC EDF+  E  +++ C H+YH  CI  WLS  +SCPLCR
Sbjct: 168 LCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCR 210

[Close]

BLAST of CcUC11G210450 vs. TAIR 10
Match: AT3G02340.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 5.0e-10
Identity = 37/112 (33.04%), Postives = 58/112 (51.79%), Query Frame = 0


Query: 13  NYAASYIMD--IESMFDLDTVLTGADDFYYNDNVVAPPSV--VVADMPTV--AVED---- 72
           N++  Y  D  +  MFD +T + G            PP+   V+ D+P V  AVE+    
Sbjct: 283 NHSGHYDADAILGQMFDDETGIRG-----------NPPAAKSVIQDLPVVELAVEELDKG 342

Query: 73  --VCAVCMEDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGD 113
             VCAVC ++ L +E  +++ C H YH  CI  WL + ++CP+CR  + + D
Sbjct: 343 NNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPTDD 383

[Close]

BLAST of CcUC11G210450 vs. TAIR 10
Match: AT5G64920.1 (COP1-interacting protein 8 )

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 0


Query: 63  VCAVCMEDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGD 113
           VCAVC +  +  E GK++ CGH YH  CI  WL   +SCP+CR  + + D
Sbjct: 256 VCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDD 305

[Close]

BLAST of CcUC11G210450 vs. TAIR 10
Match: AT2G44330.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09
Identity = 21/42 (50.00%), Postives = 29/42 (69.05%), Query Frame = 0


Query: 64  CAVCMEDFLPDEGGKQIACGHVYHQSCISSWLSVGDSCPLCR 106
           CA+C EDF+  E  +++ C H+YH  CI  WL+  +SCPLCR
Sbjct: 96  CAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCR 137

The following BLAST results are available for this feature:

BLAST of CcUC11G210450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877426.1	3.9e-49	81.97	E3 ubiquitin-protein ligase RNF126-like [Benincasa hispida]	[more]
KAA0061529.1	3.3e-48	84.07	RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa]	[more]
XP_011650093.1	2.4e-46	82.46	E3 ubiquitin-protein ligase RNF115 [Cucumis sativus]	[more]
KAE8651508.1	1.0e-44	81.98	hypothetical protein Csa_019333 [Cucumis sativus]	[more]
XP_023537996.1	1.6e-42	72.95	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC11G210450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91YL2	4.1e-09	31.96	E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1	[more]
Q9Y4L5	5.4e-09	33.71	E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2	[more]
Q9D0C1	9.2e-09	37.50	E3 ubiquitin-protein ligase RNF115 OS=Mus musculus OX=10090 GN=Rnf115 PE=1 SV=1	[more]
Q6DIP3	1.2e-08	28.87	E3 ubiquitin-protein ligase RNF126 OS=Xenopus tropicalis OX=8364 GN=rnf126 PE=2 ...	[more]
Q6AVN2	1.2e-08	39.39	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]

BLAST of CcUC11G210450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V793	1.6e-48	84.07	RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A0A0LEZ1	1.2e-46	82.46	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000920 P...	[more]
A0A6J1HNM2	2.9e-42	74.19	E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita maxima OX=3661 GN=LOC111465...	[more]
A0A6J1FDN7	7.2e-41	71.54	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1G511	8.0e-24	54.92	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of CcUC11G210450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68180.1	7.0e-12	42.65	RING/U-box superfamily protein	[more]
AT3G60080.1	3.8e-10	53.49	RING/U-box superfamily protein	[more]
AT3G02340.1	5.0e-10	33.04	RING/U-box superfamily protein	[more]
AT5G64920.1	1.1e-09	46.00	COP1-interacting protein 8	[more]
AT2G44330.1	1.5e-09	50.00	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 64..104 e-value: 2.4E-7 score: 40.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 63..105 e-value: 1.2E-11 score: 44.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 64..105 score: 12.577796
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 54..121 e-value: 2.6E-18 score: 66.9
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 22..109
None	No IPR available	PANTHER	PTHR15710:SF74	E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE	coord: 22..109
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 56..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G210450.1	CcUC11G210450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding