CcUC11G210370 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC11G210370
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr11: 2307794 .. 2308562 (+)
RNA-Seq ExpressionCcUC11G210370
SyntenyCcUC11G210370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTTTGTACCTAAACGGGCGGCAGAGACGGTGGCAAAGTCAAGAAGAACCACTGCCGCCACCACCACCGACGGTGACAGATTCAAGTGAAACATTATTCAGCCGTTCCAGAGATAAAATCAAGGCCTGTGTGCCCAAATTCCCCTCCCCATGAGCCTTAAGTGACACATAAAGCTGCTGAGCCAATGCCAATCCAGGCAGAGCAAGCCCCATATTTTGACATTCCTTCAAGCAAATTCCTAAATCCTTCACAAAATGATTCACAAAAAACCCAGGTTCAAAATCCCTCTTCAGAATCCTACTTCCATACAAATCCAGCGATTTTGATCCTGCTGCTCCCGTTGATATGGCGTTCAAGAACAAACCCACATCAAGCCCGGCTTTGTGAGCGTAAATCATCCCTTCCACCAATCCCACCATTGTCGAAGCTATGGTGATCTGATTCGCCAGCTTCGCAAATTGCCCTTTCCCACTTTCTCCCATGTAATTCACTTTCCCTAGCAGGGAGAATAACGGGCTCAATCGCCGGACTTCGCCTTCATCGCCGCCGGCAAAGATCGCCAGAGTGGCGTTTTTTGCGCCGCGATCGCCGCCTGATACTGGAGCGTCAATTGCCCCACAGCCTTTGGCGGTTGCAGCGGCGGCGATTTCAGAGGCGAGTGAGGGTTCAGAAGTGGTCATGTCGACGAGGACGCCGCCGGGGCGAAGGCCGGCGAGGGCGCCGGAGGTGGGGTCGAGGAGGACGGAGCGGACGTCGGAGGGGTAG

mRNA sequence

ATGGCCTTTGTACCTAAACGGGCGGCAGAGACGGTGGCAAAGTCAAGAAGAACCACTGCCGCCACCACCACCGACGGTGACAGATTCAAAATCCTACTTCCATACAAATCCAGCGATTTTGATCCTGCTGCTCCCGTTGATATGGCGTTCAAGAACAAACCCACATCAAGCCCGGCTTTGGAGAATAACGGGCTCAATCGCCGGACTTCGCCTTCATCGCCGCCGGCAAAGATCGCCAGAGTGGCGTTTTTTGCGCCGCGATCGCCGCCTGATACTGGAGCGTCAATTGCCCCACAGCCTTTGGCGGTTGCAGCGGCGGCGATTTCAGAGGCGAGTGAGGGTTCAGAAGTGGTCATGTCGACGAGGACGCCGCCGGGGCGAAGGCCGGCGAGGGCGCCGGAGGTGGGGTCGAGGAGGACGGAGCGGACGTCGGAGGGGTAG

Coding sequence (CDS)

ATGGCCTTTGTACCTAAACGGGCGGCAGAGACGGTGGCAAAGTCAAGAAGAACCACTGCCGCCACCACCACCGACGGTGACAGATTCAAAATCCTACTTCCATACAAATCCAGCGATTTTGATCCTGCTGCTCCCGTTGATATGGCGTTCAAGAACAAACCCACATCAAGCCCGGCTTTGGAGAATAACGGGCTCAATCGCCGGACTTCGCCTTCATCGCCGCCGGCAAAGATCGCCAGAGTGGCGTTTTTTGCGCCGCGATCGCCGCCTGATACTGGAGCGTCAATTGCCCCACAGCCTTTGGCGGTTGCAGCGGCGGCGATTTCAGAGGCGAGTGAGGGTTCAGAAGTGGTCATGTCGACGAGGACGCCGCCGGGGCGAAGGCCGGCGAGGGCGCCGGAGGTGGGGTCGAGGAGGACGGAGCGGACGTCGGAGGGGTAG

Protein sequence

MAFVPKRAAETVAKSRRTTAATTTDGDRFKILLPYKSSDFDPAAPVDMAFKNKPTSSPALENNGLNRRTSPSSPPAKIARVAFFAPRSPPDTGASIAPQPLAVAAAAISEASEGSEVVMSTRTPPGRRPARAPEVGSRRTERTSEG
Homology
BLAST of CcUC11G210370 vs. NCBI nr
Match: KAB8083453.1 (hypothetical protein EE612_005646 [Oryza sativa] >BAH91293.1 Os01g0742350 [Oryza sativa Japonica Group] >BAS74285.1 Os01g0742350 [Oryza sativa Japonica Group])

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-21
Identity = 78/159 (49.06%), Postives = 86/159 (54.09%), Query Frame = 0

Query: 28  RFKILLPYKSSDFDPAAPVDMAFKNKPTSSPAL--------------------------- 87
           R  I  PY+SSD DPAAPV+MA  +  TSSPAL                           
Sbjct: 3   RSSIRFPYRSSDLDPAAPVEMASSHFATSSPALCAYTMPSTSPTMVDAIAIWLPSFARCP 62

Query: 88  -------------ENNGLNRRTSPSSPPAKIARVAFFAPRSPPDTGASIAPQPLAVAAAA 147
                         N G  R T+ +SPPAK+  VA  APRSPP+TGAS A Q LA AA+A
Sbjct: 63  APGPPMYSAFPISLNRGARRATTAASPPAKMESVALRAPRSPPETGASTAAQLLAAAASA 122

BLAST of CcUC11G210370 vs. NCBI nr
Match: CBI27998.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-18
Identity = 58/79 (73.42%), Postives = 60/79 (75.95%), Query Frame = 0

Query: 58  PALENNGLNRRTSPSSPPAKIARVAFFAPRSPPDTGASIAPQPLAVAAAAISEASEGSEV 117
           P  EN G  R T+ SSPPAKIARVAF APRSPP+TGAS   QPL  A  AIS ASEGSEV
Sbjct: 11  PRWENKGFRRLTTDSSPPAKIARVAFLAPRSPPETGASTEKQPLEAAEEAISAASEGSEV 70

Query: 118 VMSTRTPPGRRPARAPEVG 137
           VMSTRTPPGR P RAPE G
Sbjct: 71  VMSTRTPPGRSPERAPEEG 89

BLAST of CcUC11G210370 vs. NCBI nr
Match: KAF8091058.1 (hypothetical protein N665_0455s0016 [Sinapis alba])

HSP 1 Score: 96.7 bits (239), Expect = 1.8e-16
Identity = 59/89 (66.29%), Postives = 62/89 (69.66%), Query Frame = 0

Query: 58  PALENNGLNRRTSPSSPPAKIARVAFFAPRSPPDTGASIAPQPLAVAAAAISEASEGSEV 117
           P  ENNG  R T  SSPPAKI    F APRSPP+TGAS   Q    AA  IS A EGS+V
Sbjct: 6   PISENNGSRRFTVVSSPPAKIESFPFLAPRSPPETGASTEKQFTEEAALDISSAREGSDV 65

Query: 118 VMSTRTPPGRRPARAPEVGSRRTERTSEG 147
           VMSTRTPPG RP +APE GSRRT RTSEG
Sbjct: 66  VMSTRTPPGVRPDKAPEFGSRRTWRTSEG 94

BLAST of CcUC11G210370 vs. NCBI nr
Match: KAF4390052.1 (hypothetical protein F8388_002994 [Cannabis sativa])

HSP 1 Score: 88.2 bits (217), Expect = 6.4e-14
Identity = 49/69 (71.01%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 59  ALENNGLNRRTSPSSPPAKIARVAFFAPRSPPDTGASIAPQPLAVAAAAISEASEGSEVV 118
           A+   G NR T+ SSPPAKIARV F APRSPPDTGASIA QPLA A   IS+A EGS+VV
Sbjct: 137 AILKRGFNRLTTDSSPPAKIARVPFLAPRSPPDTGASIAAQPLAAAEEEISDAREGSDVV 196

Query: 119 MSTRTPPGR 128
           +STRTPP R
Sbjct: 197 ISTRTPPER 205

BLAST of CcUC11G210370 vs. NCBI nr
Match: KAF1862290.1 (hypothetical protein Lal_00026816 [Lupinus albus])

HSP 1 Score: 74.7 bits (182), Expect = 7.3e-10
Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 78  IARVAFFAPRSPPDTGASIAPQPLAVAAAAISEASEGSEVVMSTRTPPGRRPARAPE 135
           +ARV F APRSPP+TGAS   Q  + AAAAIS ASEGS+VVMSTR PPGRRP RAPE
Sbjct: 1   MARVPFLAPRSPPETGASTEWQFFSAAAAAISTASEGSDVVMSTRIPPGRRPERAPE 57

BLAST of CcUC11G210370 vs. ExPASy TrEMBL
Match: A0A0A9JAG2 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.0e-22
Identity = 78/159 (49.06%), Postives = 87/159 (54.72%), Query Frame = 0

Query: 28  RFKILLPYKSSDFDPAAPVDMAFKNKPTSSPAL--------------------------- 87
           R +I  PY+SSD DPAAPVDMA  +  TSSPAL                           
Sbjct: 3   RSRIRFPYRSSDLDPAAPVDMASSHLATSSPALCAYTMPSTSPTMVDAMAIWLPSFARCP 62

Query: 88  -------------ENNGLNRRTSPSSPPAKIARVAFFAPRSPPDTGASIAPQPLAVAAAA 147
                          +G  R T+ +SPP K+ RVA  APRSPP+TGAS A QP   AA+A
Sbjct: 63  APGPPMYSAFPMSLKSGARRVTTAASPPEKMERVALRAPRSPPETGASTAAQPAEAAASA 122

BLAST of CcUC11G210370 vs. ExPASy TrEMBL
Match: A0A0P0V844 (Os01g0742350 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0742350 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 9.0e-22
Identity = 78/159 (49.06%), Postives = 86/159 (54.09%), Query Frame = 0

Query: 28  RFKILLPYKSSDFDPAAPVDMAFKNKPTSSPAL--------------------------- 87
           R  I  PY+SSD DPAAPV+MA  +  TSSPAL                           
Sbjct: 3   RSSIRFPYRSSDLDPAAPVEMASSHFATSSPALCAYTMPSTSPTMVDAIAIWLPSFARCP 62

Query: 88  -------------ENNGLNRRTSPSSPPAKIARVAFFAPRSPPDTGASIAPQPLAVAAAA 147
                         N G  R T+ +SPPAK+  VA  APRSPP+TGAS A Q LA AA+A
Sbjct: 63  APGPPMYSAFPISLNRGARRATTAASPPAKMESVALRAPRSPPETGASTAAQLLAAAASA 122

BLAST of CcUC11G210370 vs. ExPASy TrEMBL
Match: C7IY07 (Os01g0742350 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0742350 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 9.0e-22
Identity = 78/159 (49.06%), Postives = 86/159 (54.09%), Query Frame = 0

Query: 28  RFKILLPYKSSDFDPAAPVDMAFKNKPTSSPAL--------------------------- 87
           R  I  PY+SSD DPAAPV+MA  +  TSSPAL                           
Sbjct: 3   RSSIRFPYRSSDLDPAAPVEMASSHFATSSPALCAYTMPSTSPTMVDAIAIWLPSFARCP 62

Query: 88  -------------ENNGLNRRTSPSSPPAKIARVAFFAPRSPPDTGASIAPQPLAVAAAA 147
                         N G  R T+ +SPPAK+  VA  APRSPP+TGAS A Q LA AA+A
Sbjct: 63  APGPPMYSAFPISLNRGARRATTAASPPAKMESVALRAPRSPPETGASTAAQLLAAAASA 122

BLAST of CcUC11G210370 vs. ExPASy TrEMBL
Match: A0A0A9EAU2 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 7.1e-19
Identity = 61/89 (68.54%), Postives = 66/89 (74.16%), Query Frame = 0

Query: 58  PALENNGLNRRTSPSSPPAKIARVAFFAPRSPPDTGASIAPQPLAVAAAAISEASEGSEV 117
           P    +G  R T+ +SPPAK+ RVA  APRSPP+TGAS A  P A AAAAIS A EGSEV
Sbjct: 6   PMSLKSGARRVTTAASPPAKMERVALRAPRSPPETGASTAAHPAAAAAAAISAAREGSEV 65

Query: 118 VMSTRTPPGRRPARAPEVGSRRTERTSEG 147
           VMSTRTPPG RPARAP  GSR  ERTSEG
Sbjct: 66  VMSTRTPPGARPARAPVEGSRAVERTSEG 94

BLAST of CcUC11G210370 vs. ExPASy TrEMBL
Match: A0A0A9GN46 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.3e-17
Identity = 58/89 (65.17%), Postives = 65/89 (73.03%), Query Frame = 0

Query: 58  PALENNGLNRRTSPSSPPAKIARVAFFAPRSPPDTGASIAPQPLAVAAAAISEASEGSEV 117
           P    +G  R T+ +SPPAK+ R+A  APRSPP+TGAS A QP A A AAIS A  GSEV
Sbjct: 6   PMSLKSGARRVTTAASPPAKMERLALRAPRSPPETGASTAAQPAAAATAAISAARVGSEV 65

Query: 118 VMSTRTPPGRRPARAPEVGSRRTERTSEG 147
           V+STRTPPG RPARAP  GSR  ERTSEG
Sbjct: 66  VISTRTPPGARPARAPVEGSRAVERTSEG 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAB8083453.11.9e-2149.06hypothetical protein EE612_005646 [Oryza sativa] >BAH91293.1 Os01g0742350 [Oryza... [more]
CBI27998.31.5e-1873.42unnamed protein product, partial [Vitis vinifera][more]
KAF8091058.11.8e-1666.29hypothetical protein N665_0455s0016 [Sinapis alba][more]
KAF4390052.16.4e-1471.01hypothetical protein F8388_002994 [Cannabis sativa][more]
KAF1862290.17.3e-1073.68hypothetical protein Lal_00026816 [Lupinus albus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A9JAG24.0e-2249.06Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0P0V8449.0e-2249.06Os01g0742350 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0742350 PE... [more]
C7IY079.0e-2249.06Os01g0742350 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0742350 PE... [more]
A0A0A9EAU27.1e-1968.54Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9GN462.3e-1765.17Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC11G210370.1CcUC11G210370.1mRNA