CcUC11G209890 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G209890
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	PHD finger protein ALFIN-LIKE 4-like
Location	CicolChr11: 1834464 .. 1838328 (+)
RNA-Seq Expression	CcUC11G209890
Synteny	CcUC11G209890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGGGGAGCAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGGGATTTTAAAGGTCGTCGTGCCGGAATGATTAGAGCTCTCACCACTGGTCTAGTTCAATCTCCGTTTTCCTTTTCCTCCTCATCTATTTCTGGCTTTTCGTTTTCTAGTTTTAGGGTTTTCAATAGGCTTTTCATGGCGCTGTACATTTCTAGTTAGTTTTCTGCAGGCTGCCTTGTAATTTTACACTTATCTATTGCTTTCTTCTTGCAGATGTCGAAGAATTTTATCAGCTTTGCGACCCTGGTCTGAGCTCCCTTCTCTGTATTCTTTTTCTTTTACATAACTTGTGGGTACTTGTGATTGGGATTTGATAGTCAACACTATACATATGTGTGTTAATTAATATTCTTTTGAAATCTTCTCTGTGGGGGTATTCTCTTGATTCATGAATTTTTGGTAATGGAAAAATAAAGCAATACAATAACTACTTGTTCCTATTTGATAGTGAGAGCCTCGAATTTGGTGAGATTTCAACGAGCTACTTGCTCTACAGTTTATTACACACACACTTTAAAGCTGGAACCTGTGTTTTACTAGCGTTTTTATTTGCTTTTTTTTTTTTTTTGGGCAATTTATTTAAATTCATTGTGAGATGTAGATGATACCTGAAATTTTGTTTGAAATCACCAACTGTGCTTTGCAAACTAGAATGTAGTAAGTAATTGTTTCTGGAATTTCAGTCACTAATTGTTTCTTGAGTATTGAAGTTGGTAACAAAAATACGAGCATAGACTTTTCTTCATACTTCCTGTTCTAGGTCACTCAAAGACTAAATGCGGTTAATTGGGGACCCAATTCCTTCTAATATTTGAATAATGAAATATTTGCTTTTGGAATGGAACCATGTACTTTTTTAATAGCACTCAAGTACTCTGTGTAGCTATTTCAGCTTTTACGGATAGTGGCGAGCTTTTCAACTATTTACACAACTGTTACAAATTTCAGAGAAGGAAAACCTCTGCCTTTATGGGTTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCTGAGGAAGTACCTCCAGAGCTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAGAAAAGGATTGGCTATCCCTTGTTGCCGTTCATAGTGACGCCTGGCTTCTGGCTGTGGCTTTCTATTTTGGTGCTAGATTTGGCTTTGATAAATCGGACAGGTACTTTCCTTCCCTCTAAATTTGCTGGCTGTTGCCGCTGCCTTCGGCACCTCAGTTATATGACATTACGTTTATGACTTCGGTTTTGAAAATACAAAAATGGTCTCTGATATTTAAAAAGGCAAAAAGAGAAACAAAATGATTAGATGTGCAGAGCACTATTCTGATGTCTGGCATATCTCTTTATTAATTGTGTTTCCACCTGTTCTTTGAAGATTTCACAATATGGAGACTGACTGATGGGCCATTATTCTTATGAGTAAAAGCGTTGTATTTTAATTTAACCGATAAATTTGAGTTAAAAAAGATCAAAGAAAACTAAAGTCCGTGTCTCTCTTACAAAAAGATCAAGGAAAAGTAGGTGGCTTGGGAAAATGGACACAAATTCATGTATTTTATTTCTTGAACCGTGATCATTTTCTCTTGTTTGTGTCAGCGTTTAATTTTTGTAGAATTAATTCATGATCCAGGAAACGCCTTTTTACAATGATAAATGATCTACCCACAATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATTAGTTTCAAATAACAGCAGCAACAAATCCAAGATGGGCCCAAAAGCGGTAGATAGAACTTTCAGTATTATATTTCATTTTCGTTTGTTGAACAATGATCTGTCTTAATTGGGTCGATAGATGAAGAACTTTGGACCTTAGGGCTAGCAATTGATATAATCAACTATTTTCTTTTACCTTATGCAATTGTTCTCTCTTCAAGAACAGAAAACAAAATATAAGAGAAATTTTCAAAGTATTTTGACTTGCTTCTATATCACCATGCAGTAAATATTAATATTAGAAGCAAATTATTGATGTAGACATTGTTCATTTTGCAACGAAGTTATTGAATTTTAATACATTACACAAGATGGAATTTATCTGCAGCTCTATATGTCCAGTCGGTTTGCATCTATATATGATCTTTTGACCATATAATATTTGTTTCTCTTTTTTTAAAAACAAAACTAACATTATCAACAGCGAGGTTCTGAATCAAGCAAATTGTCCAAGGGGTTGGCAAAAGATGAGGACGAGGGACTGGATGAGGAAGATGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGTGGGGAGAATTATGCATCAGACGAGTTCTGGATATGTTGTGACATCTGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCTGAACATATCAAGCAGTACAAATGCCCCTCGTGCAGCAATAAGAGAGCACGGCCCTGACAATGATGGGTACCTCGTTAATTTATTCATGTTGGATTAAACTAACTTGTAGTCAGTCCAATGTTAATCCACGTTCCCACAGGGTATGTACTAAATGCGTTTGCTGGAACCTTGTTTATTCGGATAACTTATAGGCTATTAAAATGTATTCTGTGTAATTCCGAACTAGGATACGTAGATTGCTCTCTATGTGCGAACCTGTTGTAAGGTGGAGTACGAAACATTCTAATTTGTCTTGTTTAATTCGTTAATTGTTTTCTGATCTGCTTCTTGTCCTGGGCTTCAGAACATAAACATCATTCTCACTTCCAAGGTATGTTAACTTTACTCTGGTTTTCTTGTGGTCGCCAGCTGAAATGAGGTAGTTCATTTCCTTCTTCCACCCTTCACTCTAATGCGCAAATTGTTAAGAACCAAGTGTGTTTGGATGAGGATTTGACGATGCTTTCTGGCAATCTGACTATTGTTCAAGGCAAAATAGACAGGTGAAAAAAGCACTGTTGGATGCTGTGGATTTTAACCGTGCCCTGTGCCAAGATGTTTGAGATTCTGGCTTGTTAGTCGTCAGTAATTATATCTGTTGCGGAAGTATGAGATATGAGAATGGCAAAGCCTAAATCCTTGGTGGTTGATACAGCAGCACATGAAACCAGGTCCAGAACAATGCACAACCAAACCCTTGATTTTGTCGTGTAAATTTTACAATTCTCGGAAGATGAAGTTTTCTCTGATGTTGAAATCTAGTTAAGGTTGTAAAACACATTAGTTTTTCATCTTTCATGGCGATCTCAATGTCGTGATAGGAGTGTTATTTGACGCTCCTATTGAGGTATGTACATTTTCATTTAGTGAGGTATGTACATTTTCATCTTATCACCTTTTGAATGCATTTTTATTTAGTGAGGTATGTACATTTACTTCCTGACCAATCACTCATTTGTTCGTGATCATTCTCTTTATCGAGTTTGCCTTCTTATGCGGCTGGTTTAGTTTACCCTGAAGGTACTAAGCAACTTGGCACTTGATGGGGGAACTGATAGCTGAGAAACGAGCTAAAGACGCCCTATCTGTCGAAAGGGTGTGTTTTTTCATTCATATATCTCCCTCCTCTTTGGCACTATATTGCTTTATTTACTTGGTTGTATTGTACCATTCATTTATACTTGAAGATAGTAAACTGCTATCCATTTATTCTATATTCCCATCTTTAGGCAGTTTTTTGTACAGAGAAACGATGATTTTCAAATGTGATTATGGAACGTCTTAGAACGAATGGTGGTGCACACTTGGAAAGTGAAATACGGTGGATGTTGATGAGGTTGTTTCATGGATCTTGAAGGGTTTGTGCGATTCAGA

mRNA sequence

ATGGATGGGGGAGCAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGGGATTTTAAAGGTCGTCGTGCCGGAATGATTAGAGCTCTCACCACTGGTCTAGTTCAATCTCCGTTTTCCTTTTCCTCCTCATCTATTTCTGGCTTTTCGTTTTCTAATGTCGAAGAATTTTATCAGCTTTGCGACCCTGGTCTGAGCTCCCTTCTCTGTATTCTTTTTCTTTTACATAACTTGTGGTGGGAAGTTAATTTGCCTGCTGAGGAAGTACCTCCAGAGCTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAGAAAAGGATTGGCTATCCCTTGTTGCCGTTCATAGTGACGCCTGGCTTCTGGCTGTGGCTTTCTATTTTGGTGCTAGATTTGGCTTTGATAAATCGGACAGGAAACGCCTTTTTACAATGATAAATGATCTACCCACAATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATTAGTTTCAAATAACAGCAGCAACAAATCCAAGATGGGCCCAAAAGCGCGAGGTTCTGAATCAAGCAAATTGTCCAAGGGGTTGGCAAAAGATGAGGACGAGGGACTGGATGAGGAAGATGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGTGGGGAGAATTATGCATCAGACGAGTTCTGGATATGTTGTGACATCTGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCTGAACATATCAAGCAGTACAAATGCCCCTCGTGCAGCAATAAGAGAGCACGGCCCTGACAATGATGGGTACCTCGTTAATTTATTCATGTTGGATTAAACTAACTTGTAGTCAGTCCAATGTTAATCCACGTTCCCACAGGGTATGTACTAAATGCGTTTGCTGGAACCTTGTTTATTCGGATAACTTATAGGCTATTAAAATGTATTCTGTGTAATTCCGAACTAGGATACGTAGATTGCTCTCTATGTGCGAACCTGTTGTAAGGTGGAGTACGAAACATTCTAATTTGTCTTGTTTAATTCGTTAATTGTTTTCTGATCTGCTTCTTGTCCTGGGCTTCAGAACATAAACATCATTCTCACTTCCAAGGTATGTTAACTTTACTCTGGTTTTCTTGTGGTCGCCAGCTGAAATGAGGTAGTTCATTTCCTTCTTCCACCCTTCACTCTAATGCGCAAATTGTTAAGAACCAAGTGTGTTTGGATGAGGATTTGACGATGCTTTCTGGCAATCTGACTATTGTTCAAGGCAAAATAGACAGGTGAAAAAAGCACTGTTGGATGCTGTGGATTTTAACCGTGCCCTGTGCCAAGATGTTTGAGATTCTGGCTTGTTAGTCGTCAGTAATTATATCTGTTGCGGAAGTATGAGATATGAGAATGGCAAAGCCTAAATCCTTGGTGGTTGATACAGCAGCACATGAAACCAGGTCCAGAACAATGCACAACCAAACCCTTGATTTTGTCGTGTAAATTTTACAATTCTCGGAAGATGAAGTTTTCTCTGATGTTGAAATCTAGTTAAGGTTGTAAAACACATTAGTTTTTCATCTTTCATGGCGATCTCAATGTCGTGATAGGAGTGTTATTTGACGCTCCTATTGAGGTATGTACATTTTCATTTAGTGAGGTATGTACATTTTCATCTTATCACCTTTTGAATGCATTTTTATTTAGTGAGGTATGTACATTTACTTCCTGACCAATCACTCATTTGTTCGTGATCATTCTCTTTATCGAGTTTGCCTTCTTATGCGGCTGGTTTAGTTTACCCTGAAGGTACTAAGCAACTTGGCACTTGATGGGGGAACTGATAGCTGAGAAACGAGCTAAAGACGCCCTATCTGTCGAAAGGAGAAACGATGATTTTCAAATGTGATTATGGAACGTCTTAGAACGAATGGTGGTGCACACTTGGAAAGTGAAATACGGTGGATGTTGATGAGGTTGTTTCATGGATCTTGAAGGGTTTGTGCGATTCAGA

Coding sequence (CDS)

ATGGATGGGGGAGCAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGGGATTTTAAAGGTCGTCGTGCCGGAATGATTAGAGCTCTCACCACTGGTCTAGTTCAATCTCCGTTTTCCTTTTCCTCCTCATCTATTTCTGGCTTTTCGTTTTCTAATGTCGAAGAATTTTATCAGCTTTGCGACCCTGGTCTGAGCTCCCTTCTCTGTATTCTTTTTCTTTTACATAACTTGTGGTGGGAAGTTAATTTGCCTGCTGAGGAAGTACCTCCAGAGCTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAGAAAAGGATTGGCTATCCCTTGTTGCCGTTCATAGTGACGCCTGGCTTCTGGCTGTGGCTTTCTATTTTGGTGCTAGATTTGGCTTTGATAAATCGGACAGGAAACGCCTTTTTACAATGATAAATGATCTACCCACAATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATTAGTTTCAAATAACAGCAGCAACAAATCCAAGATGGGCCCAAAAGCGCGAGGTTCTGAATCAAGCAAATTGTCCAAGGGGTTGGCAAAAGATGAGGACGAGGGACTGGATGAGGAAGATGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGTGGGGAGAATTATGCATCAGACGAGTTCTGGATATGTTGTGACATCTGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCTGAACATATCAAGCAGTACAAATGCCCCTCGTGCAGCAATAAGAGAGCACGGCCCTGA

Protein sequence

MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQLCDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNKSKMGPKARGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP

Homology

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BLAST of CcUC11G209890 vs. NCBI nr
Match: XP_038890757.1 (PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890759.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890760.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890761.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890762.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890763.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890764.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890765.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890766.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890767.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890768.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890769.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890770.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_038890771.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 466.1 bits (1198), Expect = 2.1e-127
Identity = 235/273 (86.08%), Postives = 240/273 (87.91%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           MDGGAAYNPRTVEEVFRDFKGRRAGMIRALT                    ++VEEFYQL
Sbjct: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALT--------------------ADVEEFYQL 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+   N  WEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS
Sbjct: 61  CDPEKENL--CLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKS VSNNSSNK
Sbjct: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSSVSNNSSNK 180

Query: 181 SKMGPKARGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICE 240
           SKMGP+ RGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICE
Sbjct: 181 SKMGPRGRGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICE 240

Query: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP
Sbjct: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 251

[Close]

BLAST of CcUC11G209890 vs. NCBI nr
Match: XP_022154756.1 (PHD finger protein ALFIN-LIKE 4-like [Momordica charantia] >XP_022154758.1 PHD finger protein ALFIN-LIKE 4-like [Momordica charantia])

HSP 1 Score: 457.2 bits (1175), Expect = 9.8e-125
Identity = 230/273 (84.25%), Postives = 236/273 (86.45%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTT                    +VEEFYQ 
Sbjct: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTT--------------------DVEEFYQQ 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+   N  WEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS
Sbjct: 61  CDPEKENL--CLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTG+VKKQGKDKSLV+NNSSNK
Sbjct: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGNVKKQGKDKSLVTNNSSNK 180

Query: 181 SKMGPKARGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICE 240
           SK G K RGSESSK  KGLAKDEDEG+DEEDEEEHGETLCGACGENYASDEFWICCDICE
Sbjct: 181 SKTGSKGRGSESSKFPKGLAKDEDEGMDEEDEEEHGETLCGACGENYASDEFWICCDICE 240

Query: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP
Sbjct: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 251

[Close]

BLAST of CcUC11G209890 vs. NCBI nr
Match: KAG7030505.1 (PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 455.7 bits (1171), Expect = 2.9e-124
Identity = 233/273 (85.35%), Postives = 244/273 (89.38%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           MDGG AYNPRTVEEVFRDFKGRRAGMIRALTTGLVQS FSFSSSSIS  S++ +     L
Sbjct: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSHFSFSSSSIS-MSWNFISFATLL 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
                   LC L+ L N  WEVNLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHS
Sbjct: 61  FQISEKENLC-LYGLPNEQWEVNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           DAWLLAVAFYFG+RFG DKSDR+RLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSS+K
Sbjct: 121 DAWLLAVAFYFGSRFGCDKSDRRRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSK 180

Query: 181 SKMGPKARGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICE 240
           S+ GPK R SESSKLS GLAKDEDEGL+EE EEEHGETLCGACGENYASDEFWICCDICE
Sbjct: 181 SRTGPKGRDSESSKLSNGLAKDEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICE 240

Query: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP
Sbjct: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 271

[Close]

BLAST of CcUC11G209890 vs. NCBI nr
Match: XP_023537397.1 (PHD finger protein ALFIN-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023537398.1 PHD finger protein ALFIN-LIKE 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.8 bits (1161), Expect = 4.1e-123
Identity = 229/274 (83.58%), Postives = 237/274 (86.50%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTT                    +VEEFYQ 
Sbjct: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTT--------------------DVEEFYQQ 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+   N  WEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS
Sbjct: 61  CDPEKENL--CLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           DAWLLAVAFYFGARFGFDKSDRKRLFTMIND+PTIFEVVTG VKKQGKDKSLVSNNSSNK
Sbjct: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNSSNK 180

Query: 181 SKMGPKARGSESSKLSKGLAKDEDEG-LDEEDEEEHGETLCGACGENYASDEFWICCDIC 240
           SK G K RGSE+SKLSKGLAK+EDEG LDEE+EEEHGETLCGACGENYASDEFWICCD+C
Sbjct: 181 SKTGSKGRGSEASKLSKGLAKEEDEGLLDEEEEEEHGETLCGACGENYASDEFWICCDLC 240

Query: 241 EKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           EKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP
Sbjct: 241 EKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 252

[Close]

BLAST of CcUC11G209890 vs. NCBI nr
Match: XP_022937738.1 (PHD finger protein ALFIN-LIKE 4-like [Cucurbita moschata] >XP_022937739.1 PHD finger protein ALFIN-LIKE 4-like [Cucurbita moschata] >KAG6586490.1 PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 449.5 bits (1155), Expect = 2.0e-122
Identity = 228/274 (83.21%), Postives = 236/274 (86.13%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTT                    +VEEFYQ 
Sbjct: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTT--------------------DVEEFYQQ 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+   N  WEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS
Sbjct: 61  CDPEKENL--CLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           DAWLLAVAFYFGARFGFDKSDRKRLFTMIND+PTIFEVVTG VKKQGKDKSLVSNN SNK
Sbjct: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNK 180

Query: 181 SKMGPKARGSESSKLSKGLAKDEDEG-LDEEDEEEHGETLCGACGENYASDEFWICCDIC 240
           SK G K RGSE+SKLSKGLAK+EDEG LDEE+EEEHGETLCGACGENYASDEFWICCD+C
Sbjct: 181 SKTGSKGRGSEASKLSKGLAKEEDEGLLDEEEEEEHGETLCGACGENYASDEFWICCDLC 240

Query: 241 EKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           EKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP
Sbjct: 241 EKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 252

[Close]

BLAST of CcUC11G209890 vs. ExPASy Swiss-Prot
Match: O81488 (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2)

HSP 1 Score: 389.8 bits (1000), Expect = 2.5e-107
Identity = 201/277 (72.56%), Postives = 222/277 (80.14%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           M+ G AYNPRTVEEVFRDFKGRRAGMI+ALTT                    +V+EF++L
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTT--------------------DVQEFFRL 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+   N  WEVNLPAEEVPPELPEP LGINFARDGM EKDWLSLVAVHS
Sbjct: 61  CDPEKENL--CLYGHPNEHWEVNLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           DAWLLAVAF+FGARFGFDK+DRKRLF M+NDLPTIFEVV G+ KKQGKDKS VSNNSSN+
Sbjct: 121 DAWLLAVAFFFGARFGFDKADRKRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNR 180

Query: 181 SKMGPKARGSES-SKLSKGLAKD----EDEGLDEEDEEEHGETLCGACGENYASDEFWIC 240
           SK   K RGSES +K SK   KD    E+EG++EEDE+E GET CGACGE+YA+DEFWIC
Sbjct: 181 SKSSSK-RGSESRAKFSKPEPKDDEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWIC 240

Query: 241 CDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 273
           CD+CE WFHGKCVKITPARAEHIKQYKCPSCSNKRAR
Sbjct: 241 CDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 254

[Close]

BLAST of CcUC11G209890 vs. ExPASy Swiss-Prot
Match: Q5XEM9 (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.3e-100
Identity = 184/282 (65.25%), Postives = 219/282 (77.66%), Query Frame = 0


Query: 1   MDGGAA-YNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQ 60
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTT                    +VE+F+Q
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTT--------------------DVEDFFQ 60

Query: 61  LCDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVH 120
            CDP   +L   L+   N  WEVNLPAEEVPPELPEPALGINFARDGMQE++WLSLVAVH
Sbjct: 61  QCDPEKQNL--CLYGFPNEVWEVNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVH 120

Query: 121 SDAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSN 180
           SDAWLL+V+FYFG+RFGFD++DRKRLF+MIN++PT++EVVTG+ +KQ K+    +N + N
Sbjct: 121 SDAWLLSVSFYFGSRFGFDRADRKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGN 180

Query: 181 KSKMGPKARGSESSKLSKGLAKDEDEGL--------DEEDEEEHGETLCGACGENYASDE 240
           +SK   K RG ES       AKDE+EGL        ++EDE+EHGETLCGACG+NYASDE
Sbjct: 181 RSKSNSKMRGLESKSSKTIHAKDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDE 240

Query: 241 FWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           FWICCD+CEKWFHG+CVKITPARAEHIK YKCP+CSNKRARP
Sbjct: 241 FWICCDMCEKWFHGECVKITPARAEHIKHYKCPTCSNKRARP 260

[Close]

BLAST of CcUC11G209890 vs. ExPASy Swiss-Prot
Match: Q9M2B4 (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 3.6e-98
Identity = 180/273 (65.93%), Postives = 208/273 (76.19%), Query Frame = 0


Query: 1   MDGGAA-YNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQ 60
           M+GGAA YNPRTVEEVF+DFKGRR  +++ALTT                    +V+EFYQ
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTT--------------------DVQEFYQ 60

Query: 61  LCDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVH 120
            CDP   +L   L+ L N  WEVNLPAEEVPPELPEPALGINFARDG+ EK+WLSLVA+H
Sbjct: 61  QCDPEKENL--CLYGLPNEEWEVNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIH 120

Query: 121 SDAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSN 180
           SDAWLL+V+FYFG+RF F K +RKRLF MIND+PTIFEVVTG  K   KDKS  +N + N
Sbjct: 121 SDAWLLSVSFYFGSRFSFHKEERKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGN 180

Query: 181 KSKMGPKARGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDIC 240
           KSK   K R SE         K+EDE +DE+DE++HGETLCGACG++  +DEFWICCD+C
Sbjct: 181 KSKSNSKVRTSEGKSSKTKQPKEEDEEIDEDDEDDHGETLCGACGDSDGADEFWICCDLC 240

Query: 241 EKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 273
           EKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR
Sbjct: 241 EKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 249

[Close]

BLAST of CcUC11G209890 vs. ExPASy Swiss-Prot
Match: B8B8C5 (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26819 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.1e-91
Identity = 183/299 (61.20%), Postives = 210/299 (70.23%), Query Frame = 0


Query: 5   AAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQLCDPG 64
           A YNPRTVEEVFRDFKGRRAG++RALT                    ++VE+F++ CDP 
Sbjct: 3   AQYNPRTVEEVFRDFKGRRAGLVRALT--------------------ADVEDFFRQCDPE 62

Query: 65  LSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWL 124
             +L   L+   N  WEVNLPAEEVPPELPEPALGINFARDGMQEKDWLS+VAVHSDAWL
Sbjct: 63  KENL--CLYGFPNEHWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWL 122

Query: 125 LAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNKSKMG 184
           L+VAFYFGARFGFDK+DRKRLF MINDLPTIFEVV+G  K + K  S  +N+S++KSK  
Sbjct: 123 LSVAFYFGARFGFDKNDRKRLFGMINDLPTIFEVVSG--KSKAKPPS-ANNHSNSKSKSS 182

Query: 185 PKARGSESSKLS---------KGLAKDEDEGLDEED---------EEEHGETLCGACGEN 244
            K + SE              K   ++E+ G D+E+         EEEHGETLCGACGE+
Sbjct: 183 NKTKSSEPRAKQPKPQPQPPVKNEGREEEGGPDDEEGGGGGGGGREEEHGETLCGACGES 242

Query: 245 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCS------------NKRARP 274
           Y +DEFWICCDICEKWFHGKCVKITPA+AEHIKQYKCPSCS             KRARP
Sbjct: 243 YGADEFWICCDICEKWFHGKCVKITPAKAEHIKQYKCPSCSGGNGGGGGGSGNGKRARP 276

[Close]

BLAST of CcUC11G209890 vs. ExPASy Swiss-Prot
Match: Q6YTY3 (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0608400 PE=2 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.5e-91
Identity = 183/300 (61.00%), Postives = 210/300 (70.00%), Query Frame = 0


Query: 5   AAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQLCDPG 64
           A YNPRTVEEVFRDFKGRRAG++RALT                    ++VE+F++ CDP 
Sbjct: 3   AQYNPRTVEEVFRDFKGRRAGLVRALT--------------------ADVEDFFRQCDPE 62

Query: 65  LSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWL 124
             +L   L+   N  WEVNLPAEEVPPELPEPALGINFARDGMQEKDWLS+VAVHSDAWL
Sbjct: 63  KENL--CLYGFPNEHWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWL 122

Query: 125 LAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNKSKMG 184
           L+VAFYFGARFGFDK+DRKRLF MINDLPTIFEVV+G  K + K  S  +N+S++KSK  
Sbjct: 123 LSVAFYFGARFGFDKNDRKRLFGMINDLPTIFEVVSG--KSKAKPPS-ANNHSNSKSKSS 182

Query: 185 PKARGSESSKLS---------KGLAKDEDEGLDEED----------EEEHGETLCGACGE 244
            K + SE              K   ++E+ G D+E+          EEEHGETLCGACGE
Sbjct: 183 NKTKSSEPRAKQPKPQPQPPVKNEGREEEGGPDDEEGGGGGGGGGREEEHGETLCGACGE 242

Query: 245 NYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCS------------NKRARP 274
           +Y +DEFWICCDICEKWFHGKCVKITPA+AEHIKQYKCPSCS             KRARP
Sbjct: 243 SYGADEFWICCDICEKWFHGKCVKITPAKAEHIKQYKCPSCSGGNGGGGGVSGNGKRARP 277

[Close]

BLAST of CcUC11G209890 vs. ExPASy TrEMBL
Match: A0A6J1DL70 (PHD finger protein ALFIN-LIKE 4-like OS=Momordica charantia OX=3673 GN=LOC111021932 PE=3 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.7e-125
Identity = 230/273 (84.25%), Postives = 236/273 (86.45%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTT                    +VEEFYQ 
Sbjct: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTT--------------------DVEEFYQQ 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+   N  WEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS
Sbjct: 61  CDPEKENL--CLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTG+VKKQGKDKSLV+NNSSNK
Sbjct: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGNVKKQGKDKSLVTNNSSNK 180

Query: 181 SKMGPKARGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICE 240
           SK G K RGSESSK  KGLAKDEDEG+DEEDEEEHGETLCGACGENYASDEFWICCDICE
Sbjct: 181 SKTGSKGRGSESSKFPKGLAKDEDEGMDEEDEEEHGETLCGACGENYASDEFWICCDICE 240

Query: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP
Sbjct: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 251

[Close]

BLAST of CcUC11G209890 vs. ExPASy TrEMBL
Match: A0A6J1FGT0 (PHD finger protein ALFIN-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111444046 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 9.9e-123
Identity = 228/274 (83.21%), Postives = 236/274 (86.13%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTT                    +VEEFYQ 
Sbjct: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTT--------------------DVEEFYQQ 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+   N  WEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS
Sbjct: 61  CDPEKENL--CLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           DAWLLAVAFYFGARFGFDKSDRKRLFTMIND+PTIFEVVTG VKKQGKDKSLVSNN SNK
Sbjct: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNK 180

Query: 181 SKMGPKARGSESSKLSKGLAKDEDEG-LDEEDEEEHGETLCGACGENYASDEFWICCDIC 240
           SK G K RGSE+SKLSKGLAK+EDEG LDEE+EEEHGETLCGACGENYASDEFWICCD+C
Sbjct: 181 SKTGSKGRGSEASKLSKGLAKEEDEGLLDEEEEEEHGETLCGACGENYASDEFWICCDLC 240

Query: 241 EKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           EKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP
Sbjct: 241 EKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 252

[Close]

BLAST of CcUC11G209890 vs. ExPASy TrEMBL
Match: A0A6J1HSJ7 (PHD finger protein ALFIN-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465768 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.7e-122
Identity = 228/274 (83.21%), Postives = 236/274 (86.13%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           MD GAAYNPRTVEEVFRDFKGRRAGMIRALTT                    +VEEFYQ 
Sbjct: 1   MDRGAAYNPRTVEEVFRDFKGRRAGMIRALTT--------------------DVEEFYQQ 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+   N  WEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS
Sbjct: 61  CDPEKENL--CLYGFPNELWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           DAWLLAVAFYFGARFGFDKSDRKRLFTMIND+PTIFEVVTG VKKQGKDKSLVSNNSSNK
Sbjct: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNSSNK 180

Query: 181 SKMGPKARGSESSKLSKGLAKDEDEG-LDEEDEEEHGETLCGACGENYASDEFWICCDIC 240
           SK G K RGSE+SKLSKGLAK+EDEG LDEE+EEEHGETLCGACGENYASDEFWICCD+C
Sbjct: 181 SKTGSKGRGSEASKLSKGLAKEEDEGLLDEEEEEEHGETLCGACGENYASDEFWICCDLC 240

Query: 241 EKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           EKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP
Sbjct: 241 EKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 252

[Close]

BLAST of CcUC11G209890 vs. ExPASy TrEMBL
Match: A0A6J1KET6 (PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493665 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 6.4e-122
Identity = 226/273 (82.78%), Postives = 235/273 (86.08%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           MDGG AYNPRTVEEVFRDFKGRRAGMIRALTT +V                    EFYQL
Sbjct: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVV--------------------EFYQL 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+ L N  WEVNLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHS
Sbjct: 61  CDPEKENL--CLYGLPNEQWEVNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           DAWLLAVAFYFG+RFG DKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSS+K
Sbjct: 121 DAWLLAVAFYFGSRFGCDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSK 180

Query: 181 SKMGPKARGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICE 240
           S+ GPK R SESSKLS GLAKDEDEGL+EE EEEHGETLCGACGENYASDEFWICCDICE
Sbjct: 181 SRTGPKGRDSESSKLSNGLAKDEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICE 240

Query: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP
Sbjct: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 251

[Close]

BLAST of CcUC11G209890 vs. ExPASy TrEMBL
Match: A0A6J1G4T7 (PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450718 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.4e-121
Identity = 225/273 (82.42%), Postives = 235/273 (86.08%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           MDGG AYNPRTVEEVFRDFKGRRAGMIRALTT +V                    EFYQL
Sbjct: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVV--------------------EFYQL 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+ L N  WEVNLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHS
Sbjct: 61  CDPEKENL--CLYGLPNEQWEVNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           DAWLLAVAFYFG+RFG DKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSS+K
Sbjct: 121 DAWLLAVAFYFGSRFGCDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSK 180

Query: 181 SKMGPKARGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICE 240
           S+ GPK R SESSKLS GLAKDED+GL+EE EEEHGETLCGACGENYASDEFWICCDICE
Sbjct: 181 SRTGPKGRDSESSKLSNGLAKDEDDGLNEEAEEEHGETLCGACGENYASDEFWICCDICE 240

Query: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP
Sbjct: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 251

[Close]

BLAST of CcUC11G209890 vs. TAIR 10
Match: AT5G26210.1 (alfin-like 4 )

HSP 1 Score: 389.8 bits (1000), Expect = 1.8e-108
Identity = 201/277 (72.56%), Postives = 222/277 (80.14%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           M+ G AYNPRTVEEVFRDFKGRRAGMI+ALTT                    +V+EF++L
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTT--------------------DVQEFFRL 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+   N  WEVNLPAEEVPPELPEP LGINFARDGM EKDWLSLVAVHS
Sbjct: 61  CDPEKENL--CLYGHPNEHWEVNLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           DAWLLAVAF+FGARFGFDK+DRKRLF M+NDLPTIFEVV G+ KKQGKDKS VSNNSSN+
Sbjct: 121 DAWLLAVAFFFGARFGFDKADRKRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNR 180

Query: 181 SKMGPKARGSES-SKLSKGLAKD----EDEGLDEEDEEEHGETLCGACGENYASDEFWIC 240
           SK   K RGSES +K SK   KD    E+EG++EEDE+E GET CGACGE+YA+DEFWIC
Sbjct: 181 SKSSSK-RGSESRAKFSKPEPKDDEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWIC 240

Query: 241 CDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 273
           CD+CE WFHGKCVKITPARAEHIKQYKCPSCSNKRAR
Sbjct: 241 CDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 254

[Close]

BLAST of CcUC11G209890 vs. TAIR 10
Match: AT5G20510.1 (alfin-like 5 )

HSP 1 Score: 367.5 bits (942), Expect = 9.5e-102
Identity = 184/282 (65.25%), Postives = 219/282 (77.66%), Query Frame = 0


Query: 1   MDGGAA-YNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQ 60
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTT                    +VE+F+Q
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTT--------------------DVEDFFQ 60

Query: 61  LCDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVH 120
            CDP   +L   L+   N  WEVNLPAEEVPPELPEPALGINFARDGMQE++WLSLVAVH
Sbjct: 61  QCDPEKQNL--CLYGFPNEVWEVNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVH 120

Query: 121 SDAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSN 180
           SDAWLL+V+FYFG+RFGFD++DRKRLF+MIN++PT++EVVTG+ +KQ K+    +N + N
Sbjct: 121 SDAWLLSVSFYFGSRFGFDRADRKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGN 180

Query: 181 KSKMGPKARGSESSKLSKGLAKDEDEGL--------DEEDEEEHGETLCGACGENYASDE 240
           +SK   K RG ES       AKDE+EGL        ++EDE+EHGETLCGACG+NYASDE
Sbjct: 181 RSKSNSKMRGLESKSSKTIHAKDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDE 240

Query: 241 FWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           FWICCD+CEKWFHG+CVKITPARAEHIK YKCP+CSNKRARP
Sbjct: 241 FWICCDMCEKWFHGECVKITPARAEHIKHYKCPTCSNKRARP 260

[Close]

BLAST of CcUC11G209890 vs. TAIR 10
Match: AT3G42790.1 (alfin-like 3 )

HSP 1 Score: 359.4 bits (921), Expect = 2.6e-99
Identity = 180/273 (65.93%), Postives = 208/273 (76.19%), Query Frame = 0


Query: 1   MDGGAA-YNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQ 60
           M+GGAA YNPRTVEEVF+DFKGRR  +++ALTT                    +V+EFYQ
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTT--------------------DVQEFYQ 60

Query: 61  LCDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVH 120
            CDP   +L   L+ L N  WEVNLPAEEVPPELPEPALGINFARDG+ EK+WLSLVA+H
Sbjct: 61  QCDPEKENL--CLYGLPNEEWEVNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIH 120

Query: 121 SDAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSN 180
           SDAWLL+V+FYFG+RF F K +RKRLF MIND+PTIFEVVTG  K   KDKS  +N + N
Sbjct: 121 SDAWLLSVSFYFGSRFSFHKEERKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGN 180

Query: 181 KSKMGPKARGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDIC 240
           KSK   K R SE         K+EDE +DE+DE++HGETLCGACG++  +DEFWICCD+C
Sbjct: 181 KSKSNSKVRTSEGKSSKTKQPKEEDEEIDEDDEDDHGETLCGACGDSDGADEFWICCDLC 240

Query: 241 EKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 273
           EKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR
Sbjct: 241 EKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 249

[Close]

BLAST of CcUC11G209890 vs. TAIR 10
Match: AT2G02470.1 (alfin-like 6 )

HSP 1 Score: 330.9 bits (847), Expect = 9.9e-91
Identity = 178/280 (63.57%), Postives = 206/280 (73.57%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           M+G     PRTVEEVF DF+GRRAG+I+ALT  +V                    +FYQ 
Sbjct: 1   MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMV--------------------KFYQT 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+ L N  WEVNLP EEVPPELPEPALGINFARDGMQEKDW+SLVAVHS
Sbjct: 61  CDPEKENL--CLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           D+WLL+VAFYFGARFGF K++RKRLF MIN+LPTIFEVV+G+  KQ KD S V+NN+S  
Sbjct: 121 DSWLLSVAFYFGARFGFGKNERKRLFQMINELPTIFEVVSGNA-KQSKDLS-VNNNNSKS 180

Query: 181 SKMGPKARGSES----SKLSKGLAKDEDEGLDE-EDEEEHGE--TLCGACGENYASDEFW 240
              G K+R SES    +K+S    K+E+E  DE EDE E  E   +CGACG+NY +DEFW
Sbjct: 181 KPSGVKSRQSESLSKVAKMSSPPPKEEEEEEDESEDESEDDEQGAVCGACGDNYGTDEFW 240

Query: 241 ICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           ICCD CEKWFHGKCVKITPA+AEHIK YKCP+CSNKRARP
Sbjct: 241 ICCDACEKWFHGKCVKITPAKAEHIKHYKCPTCSNKRARP 256

[Close]

BLAST of CcUC11G209890 vs. TAIR 10
Match: AT2G02470.2 (alfin-like 6 )

HSP 1 Score: 327.4 bits (838), Expect = 1.1e-89
Identity = 171/273 (62.64%), Postives = 201/273 (73.63%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTGLVQSPFSFSSSSISGFSFSNVEEFYQL 60
           M+G     PRTVEEVF DF+GRRAG+I+ALT  +V                    +FYQ 
Sbjct: 1   MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMV--------------------KFYQT 60

Query: 61  CDPGLSSLLCILFLLHNLWWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHS 120
           CDP   +L   L+ L N  WEVNLP EEVPPELPEPALGINFARDGMQEKDW+SLVAVHS
Sbjct: 61  CDPEKENL--CLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHS 120

Query: 121 DAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSNK 180
           D+WLL+VAFYFGARFGF K++RKRLF MIN+LPTIFEVV+G+  KQ KD S+  NN+++K
Sbjct: 121 DSWLLSVAFYFGARFGFGKNERKRLFQMINELPTIFEVVSGNA-KQSKDLSV--NNNNSK 180

Query: 181 SKMGPKARGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICE 240
           SK         SS   K   ++EDE  DE +++E G  +CGACG+NY +DEFWICCD CE
Sbjct: 181 SKPSGVKVAKMSSPPPKEEEEEEDESEDESEDDEQG-AVCGACGDNYGTDEFWICCDACE 240

Query: 241 KWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 274
           KWFHGKCVKITPA+AEHIK YKCP+CSNKRARP
Sbjct: 241 KWFHGKCVKITPAKAEHIKHYKCPTCSNKRARP 247

The following BLAST results are available for this feature:

BLAST of CcUC11G209890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890757.1	2.1e-127	86.08	PHD finger protein ALFIN-LIKE 4-like isoform X1 [Benincasa hispida] >XP_03889075...	[more]
XP_022154756.1	9.8e-125	84.25	PHD finger protein ALFIN-LIKE 4-like [Momordica charantia] >XP_022154758.1 PHD f...	[more]
KAG7030505.1	2.9e-124	85.35	PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_023537397.1	4.1e-123	83.58	PHD finger protein ALFIN-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023537398....	[more]
XP_022937738.1	2.0e-122	83.21	PHD finger protein ALFIN-LIKE 4-like [Cucurbita moschata] >XP_022937739.1 PHD fi...	[more]

BLAST of CcUC11G209890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81488	2.5e-107	72.56	PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2	[more]
Q5XEM9	1.3e-100	65.25	PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1	[more]
Q9M2B4	3.6e-98	65.93	PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1	[more]
B8B8C5	1.1e-91	61.20	PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26...	[more]
Q6YTY3	1.5e-91	61.00	PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07...	[more]

BLAST of CcUC11G209890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DL70	4.7e-125	84.25	PHD finger protein ALFIN-LIKE 4-like OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1FGT0	9.9e-123	83.21	PHD finger protein ALFIN-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114440...	[more]
A0A6J1HSJ7	1.7e-122	83.21	PHD finger protein ALFIN-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465768...	[more]
A0A6J1KET6	6.4e-122	82.78	PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G4T7	1.4e-121	82.42	PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CcUC11G209890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26210.1	1.8e-108	72.56	alfin-like 4	[more]
AT5G20510.1	9.5e-102	65.25	alfin-like 5	[more]
AT3G42790.1	2.6e-99	65.93	alfin-like 3	[more]
AT2G02470.1	9.9e-91	63.57	alfin-like 6	[more]
AT2G02470.2	1.1e-89	62.64	alfin-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 219..267 e-value: 2.1E-9 score: 47.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 210..268 e-value: 3.7E-26 score: 92.3
IPR021998	Alfin, N-terminal	PFAM	PF12165	Alfin	coord: 52..161 e-value: 7.7E-47 score: 158.2
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 220..268 e-value: 2.0E-10 score: 40.4
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 217..269 score: 9.5256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..186
None	No IPR available	PANTHER	PTHR12321:SF141	PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1	coord: 3..273
IPR045104	Alfin	PANTHER	PTHR12321	CPG BINDING PROTEIN	coord: 3..273
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 220..266
IPR044104	Alfin1-like, PHD finger	CDD	cd15613	PHD_AL_plant	coord: 219..269 e-value: 2.71524E-32 score: 111.048
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 209..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G209890.1	CcUC11G209890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0042393	histone binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003712	transcription coregulator activity