CcUC11G209800 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G209800
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Elf4 domain-containing protein
Location	CicolChr11: 1786087 .. 1786512 (+)
RNA-Seq Expression	CcUC11G209800
Synteny	CcUC11G209800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTATGTTTGAATTTATATTATGGAAATTGCAAGTAATTATTTGTTTAATTAATATTATTGGAAGCAGGATTATTATTATAATTGGAAGTGATAATATGGAAGGGGAGATGAGATTGTGGAAAGGAAGGGAAATGGATGGGAAAATGGTTGAGACATTTCAGAAGAATTTTGTTAAAGTTGAGAATATTTTAGACCAAAACAGATTGCTGATTAATGAAATTAACCAAAATCACGAGTCCAAATTGCCGGATAATCTCACCAAAAACGTCGCTCTAATTCGCGAGCTCAACAACAATATCAGAAGAGTTGTTGATTTGTACGCCGATCTCTCCACTTCCTTCACTAAATCCGTCGACCCTTCCGCCTCCGATGGAGACTCCGCCGCCGCGCCTGGCCACAAGCGCAACCGTCCTCCGCCCTAG

mRNA sequence

ATGATTATGTTTGAATTTATATTATGGAAATTGCAAGTAATTATTTGTTTAATTAATATTATTGGAAGCAGGATTATTATTATAATTGGAAGTGATAATATGGAAGGGGAGATGAGATTGTGGAAAGGAAGGGAAATGGATGGGAAAATGGTTGAGACATTTCAGAAGAATTTTGTTAAAGTTGAGAATATTTTAGACCAAAACAGATTGCTGATTAATGAAATTAACCAAAATCACGAGTCCAAATTGCCGGATAATCTCACCAAAAACGTCGCTCTAATTCGCGAGCTCAACAACAATATCAGAAGAGTTGTTGATTTGTACGCCGATCTCTCCACTTCCTTCACTAAATCCGTCGACCCTTCCGCCTCCGATGGAGACTCCGCCGCCGCGCCTGGCCACAAGCGCAACCGTCCTCCGCCCTAG

Coding sequence (CDS)

ATGATTATGTTTGAATTTATATTATGGAAATTGCAAGTAATTATTTGTTTAATTAATATTATTGGAAGCAGGATTATTATTATAATTGGAAGTGATAATATGGAAGGGGAGATGAGATTGTGGAAAGGAAGGGAAATGGATGGGAAAATGGTTGAGACATTTCAGAAGAATTTTGTTAAAGTTGAGAATATTTTAGACCAAAACAGATTGCTGATTAATGAAATTAACCAAAATCACGAGTCCAAATTGCCGGATAATCTCACCAAAAACGTCGCTCTAATTCGCGAGCTCAACAACAATATCAGAAGAGTTGTTGATTTGTACGCCGATCTCTCCACTTCCTTCACTAAATCCGTCGACCCTTCCGCCTCCGATGGAGACTCCGCCGCCGCGCCTGGCCACAAGCGCAACCGTCCTCCGCCCTAG

Protein sequence

MIMFEFILWKLQVIICLINIIGSRIIIIIGSDNMEGEMRLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAAPGHKRNRPPP

Homology

[Close]

BLAST of CcUC11G209800 vs. NCBI nr
Match: XP_038890489.1 (protein ELF4-LIKE 3-like [Benincasa hispida])

HSP 1 Score: 166.0 bits (419), Expect = 2.3e-37
Identity = 91/113 (80.53%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 34  MEGEM----RLWKG-REMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLT 93
           MEGE      + KG REMDGKMV+TFQKNFV+VENILDQNRLLINEINQNHESK+P NLT
Sbjct: 1   MEGETLSSGGIGKGIREMDGKMVQTFQKNFVQVENILDQNRLLINEINQNHESKMPHNLT 60

Query: 94  KNVALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAAPGHKRNRPPP 142
           +NV LIRELNNNIRRVVDLYADLSTSFTKS+D    DGDSA  PGHKRNRPPP
Sbjct: 61  RNVGLIRELNNNIRRVVDLYADLSTSFTKSID----DGDSAVKPGHKRNRPPP 109

[Close]

BLAST of CcUC11G209800 vs. NCBI nr
Match: XP_022946747.1 (protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022946748.1 protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022999232.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999233.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999234.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999235.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >KAG7030507.1 Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-35
Identity = 85/112 (75.89%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 34  MEGEM----RLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTK 93
           MEGE      +  GR+MDGKM +TFQKNFV+V+NILDQNRLLINEINQNHESK+PDNL +
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 94  NVALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAAPGHKRNRPPP 142
           NV LIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SAA PGHKRNRPPP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEAS-SEGNSAAKPGHKRNRPPP 111

[Close]

BLAST of CcUC11G209800 vs. NCBI nr
Match: XP_023521403.1 (protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023521404.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023546933.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023546934.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.1 bits (401), Expect = 2.9e-35
Identity = 85/112 (75.89%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 34  MEGEM----RLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTK 93
           MEGE      +  GR+MDGKM  TFQKNFV+V+NILDQNRLLINEINQNHESK+PDNL +
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAHTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 94  NVALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAAPGHKRNRPPP 142
           NV LIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SAA PGHKRNRPPP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEAS-SEGNSAAKPGHKRNRPPP 111

[Close]

BLAST of CcUC11G209800 vs. NCBI nr
Match: KAG6599530.1 (Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 158.7 bits (400), Expect = 3.7e-35
Identity = 81/99 (81.82%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 43  GREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNNNIR 102
           GR+MDGKM +TFQKNFV+V+NILDQNRLLINEINQNHESK+PDNL +NV LIRELNNNIR
Sbjct: 4   GRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLARNVGLIRELNNNIR 63

Query: 103 RVVDLYADLSTSFTKSVDPSASDGDSAAAPGHKRNRPPP 142
           RVVDLYA LS SFTKS++ S S+G+SAA PGHKRNRPPP
Sbjct: 64  RVVDLYAHLSASFTKSMEAS-SEGNSAAKPGHKRNRPPP 101

[Close]

BLAST of CcUC11G209800 vs. NCBI nr
Match: XP_016719642.1 (protein ELF4-LIKE 3-like [Gossypium hirsutum] >KAA3457890.1 protein ELF4-LIKE 3-like [Gossypium australe] >MBA0703389.1 hypothetical protein [Gossypium laxum] >MBA0820926.1 hypothetical protein [Gossypium armourianum] >MBA0846902.1 hypothetical protein [Gossypium schwendimanii] >KAG4136567.1 hypothetical protein ERO13_D07G014000v2 [Gossypium hirsutum])

HSP 1 Score: 149.8 bits (377), Expect = 1.7e-32
Identity = 79/103 (76.70%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 40  LWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNN 99
           L  G E+D K+V+TFQKNFV+V+NILDQNRLLINEINQNHE+K+PDNLT+NV LIRELNN
Sbjct: 9   LGNGGEIDTKVVQTFQKNFVQVQNILDQNRLLINEINQNHETKIPDNLTRNVGLIRELNN 68

Query: 100 NIRRVVDLYADLSTSFTKSVDPSASDGDSAAA---PGHKRNRP 140
           NIRRVVDLYADLSTS+TKS+D S+SDGDS  A    G+KRNRP
Sbjct: 69  NIRRVVDLYADLSTSYTKSMDASSSDGDSNGAMKSGGNKRNRP 111

[Close]

BLAST of CcUC11G209800 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 9.2e-29
Identity = 67/109 (61.47%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 34  MEGE---MRLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKN 93
           MEG+     +  G +MDGK+++TF+K+FV+V+NILD NRLLINEINQNHESK+PDNL +N
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 94  VALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAAPGHKRNRP 140
           V LIRELNNN+RRV  LY DLS +F+KS++ S S+GDS+   G++R RP
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEAS-SEGDSSEGRGNRRIRP 108

[Close]

BLAST of CcUC11G209800 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-25
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 34  MEGEMRLWKG--REMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNV 93
           MEG++    G    MDGK++++FQK+FV V++ILDQNRLLINEINQNHESK PDNL +NV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 94  ALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA 130
            LI+ELNNNIRRV  LY DLS SF +SVD S S+G+S+
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDAS-SEGESS 97

[Close]

BLAST of CcUC11G209800 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.2e-24
Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 34  MEGEMRLWKGR--EMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNV 93
           MEG++    G   +MDGK+++ FQK+FV+V++ILDQNRLLINEINQNHESK  D+L +NV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 94  ALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS 129
            LIRELNNNIR V  LY DLS SF +SVD S S+G+S
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDAS-SEGES 100

[Close]

BLAST of CcUC11G209800 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.4e-15
Identity = 40/87 (45.98%), Postives = 61/87 (70.11%), Query Frame = 0


Query: 47  DGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNNNIRRVVD 106
           D  M E   +NF +V+++LD+NR LI ++N NH+S++ DN++KNVALI+ELN NI +VV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 107 LYADLSTSFTKSVDPSASDGDSAAAPG 134
           +Y+DL+TSF+       +  D   A G
Sbjct: 82  MYSDLNTSFSSGFHGGKNGHDGGGAAG 108

[Close]

BLAST of CcUC11G209800 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.7e-12
Identity = 36/85 (42.35%), Postives = 57/85 (67.06%), Query Frame = 0


Query: 47  DGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNNNIRRVVD 106
           D ++ +T    F + +  LDQNR LI  +N+NH S++PDN+++NV LI E+N NI +V++
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 107 LYADLSTSFTKSVDP---SASDGDS 129
           +Y+DLS +F K  D    +  DGD+
Sbjct: 94  IYSDLSLNFAKKFDQRRRTTKDGDT 118

[Close]

BLAST of CcUC11G209800 vs. ExPASy TrEMBL
Match: A0A6J1KJ14 (protein ELF4-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493668 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 8.1e-36
Identity = 85/112 (75.89%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 34  MEGEM----RLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTK 93
           MEGE      +  GR+MDGKM +TFQKNFV+V+NILDQNRLLINEINQNHESK+PDNL +
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 94  NVALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAAPGHKRNRPPP 142
           NV LIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SAA PGHKRNRPPP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEAS-SEGNSAAKPGHKRNRPPP 111

[Close]

BLAST of CcUC11G209800 vs. ExPASy TrEMBL
Match: A0A6J1G4K6 (protein ELF4-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450723 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 8.1e-36
Identity = 85/112 (75.89%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 34  MEGEM----RLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTK 93
           MEGE      +  GR+MDGKM +TFQKNFV+V+NILDQNRLLINEINQNHESK+PDNL +
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 94  NVALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAAPGHKRNRPPP 142
           NV LIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SAA PGHKRNRPPP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEAS-SEGNSAAKPGHKRNRPPP 111

[Close]

BLAST of CcUC11G209800 vs. ExPASy TrEMBL
Match: F6HGP9 (Elf4 domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g01370 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.9e-33
Identity = 83/115 (72.17%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 33  NMEGE--MRLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKN 92
           NMEG+    L  G ++DGK+++TFQK+FV+V+NILDQNRLLINEINQNHESK+PDNL++N
Sbjct: 35  NMEGDTFSGLGNGTQIDGKVLQTFQKSFVQVQNILDQNRLLINEINQNHESKIPDNLSRN 94

Query: 93  VALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAA------PGHKRNRP 140
           V LIRELNNNIRRVVDLYADLSTSFTKSVD S S+GDS+ A       GHKRNRP
Sbjct: 95  VGLIRELNNNIRRVVDLYADLSTSFTKSVDGS-SEGDSSGALRSDGKAGHKRNRP 148

[Close]

BLAST of CcUC11G209800 vs. ExPASy TrEMBL
Match: A0A1U8LYM5 (protein ELF4-LIKE 3-like OS=Gossypium hirsutum OX=3635 GN=LOC107932202 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.4e-33
Identity = 79/103 (76.70%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 40  LWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNN 99
           L  G E+D K+V+TFQKNFV+V+NILDQNRLLINEINQNHE+K+PDNLT+NV LIRELNN
Sbjct: 9   LGNGGEIDTKVVQTFQKNFVQVQNILDQNRLLINEINQNHETKIPDNLTRNVGLIRELNN 68

Query: 100 NIRRVVDLYADLSTSFTKSVDPSASDGDSAAA---PGHKRNRP 140
           NIRRVVDLYADLSTS+TKS+D S+SDGDS  A    G+KRNRP
Sbjct: 69  NIRRVVDLYADLSTSYTKSMDASSSDGDSNGAMKSGGNKRNRP 111

[Close]

BLAST of CcUC11G209800 vs. ExPASy TrEMBL
Match: A0A7J9IFS5 (Elf4 domain-containing protein OS=Gossypium armourianum OX=34283 GN=Goarm_017815 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.4e-33
Identity = 79/103 (76.70%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 40  LWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNN 99
           L  G E+D K+V+TFQKNFV+V+NILDQNRLLINEINQNHE+K+PDNLT+NV LIRELNN
Sbjct: 9   LGNGGEIDTKVVQTFQKNFVQVQNILDQNRLLINEINQNHETKIPDNLTRNVGLIRELNN 68

Query: 100 NIRRVVDLYADLSTSFTKSVDPSASDGDSAAA---PGHKRNRP 140
           NIRRVVDLYADLSTS+TKS+D S+SDGDS  A    G+KRNRP
Sbjct: 69  NIRRVVDLYADLSTSYTKSMDASSSDGDSNGAMKSGGNKRNRP 111

[Close]

BLAST of CcUC11G209800 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 )

HSP 1 Score: 127.9 bits (320), Expect = 6.6e-30
Identity = 67/109 (61.47%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 34  MEGE---MRLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKN 93
           MEG+     +  G +MDGK+++TF+K+FV+V+NILD NRLLINEINQNHESK+PDNL +N
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 94  VALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAAPGHKRNRP 140
           V LIRELNNN+RRV  LY DLS +F+KS++ S S+GDS+   G++R RP
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEAS-SEGDSSEGRGNRRIRP 108

[Close]

BLAST of CcUC11G209800 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 )

HSP 1 Score: 117.5 bits (293), Expect = 8.9e-27
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 34  MEGEMRLWKG--REMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNV 93
           MEG++    G    MDGK++++FQK+FV V++ILDQNRLLINEINQNHESK PDNL +NV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 94  ALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA 130
            LI+ELNNNIRRV  LY DLS SF +SVD S S+G+S+
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDAS-SEGESS 97

[Close]

BLAST of CcUC11G209800 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 )

HSP 1 Score: 117.5 bits (293), Expect = 8.9e-27
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 34  MEGEMRLWKG--REMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNV 93
           MEG++    G    MDGK++++FQK+FV V++ILDQNRLLINEINQNHESK PDNL +NV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 94  ALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA 130
            LI+ELNNNIRRV  LY DLS SF +SVD S S+G+S+
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDAS-SEGESS 97

[Close]

BLAST of CcUC11G209800 vs. TAIR 10
Match: AT1G72630.1 (ELF4-like 2 )

HSP 1 Score: 112.1 bits (279), Expect = 3.7e-25
Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 34  MEGEMRLWKGR--EMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNV 93
           MEG++    G   +MDGK+++ FQK+FV+V++ILDQNRLLINEINQNHESK  D+L +NV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 94  ALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS 129
            LIRELNNNIR V  LY DLS SF +SVD S S+G+S
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDAS-SEGES 100

[Close]

BLAST of CcUC11G209800 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) )

HSP 1 Score: 82.4 bits (202), Expect = 3.2e-16
Identity = 40/87 (45.98%), Postives = 61/87 (70.11%), Query Frame = 0


Query: 47  DGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNNNIRRVVD 106
           D  M E   +NF +V+++LD+NR LI ++N NH+S++ DN++KNVALI+ELN NI +VV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 107 LYADLSTSFTKSVDPSASDGDSAAAPG 134
           +Y+DL+TSF+       +  D   A G
Sbjct: 82  MYSDLNTSFSSGFHGGKNGHDGGGAAG 108

The following BLAST results are available for this feature:

BLAST of CcUC11G209800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890489.1	2.3e-37	80.53	protein ELF4-LIKE 3-like [Benincasa hispida]	[more]
XP_022946747.1	1.7e-35	75.89	protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022946748.1 protein ELF4-LIKE ...	[more]
XP_023521403.1	2.9e-35	75.89	protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023521404.1...	[more]
KAG6599530.1	3.7e-35	81.82	Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_016719642.1	1.7e-32	76.70	protein ELF4-LIKE 3-like [Gossypium hirsutum] >KAA3457890.1 protein ELF4-LIKE 3-...	[more]

BLAST of CcUC11G209800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8F5	9.2e-29	61.47	Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1	[more]
Q570U6	1.2e-25	65.31	Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1	[more]
Q94BS8	5.2e-24	63.92	Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1	[more]
O04211	4.4e-15	45.98	Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1	[more]
O80877	2.7e-12	42.35	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1	[more]

BLAST of CcUC11G209800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJ14	8.1e-36	75.89	protein ELF4-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493668 PE=3 SV=1	[more]
A0A6J1G4K6	8.1e-36	75.89	protein ELF4-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450723 PE=3 SV=1	[more]
F6HGP9	4.9e-33	72.17	Elf4 domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g01370 P...	[more]
A0A1U8LYM5	8.4e-33	76.70	protein ELF4-LIKE 3-like OS=Gossypium hirsutum OX=3635 GN=LOC107932202 PE=3 SV=1	[more]
A0A7J9IFS5	8.4e-33	76.70	Elf4 domain-containing protein OS=Gossypium armourianum OX=34283 GN=Goarm_017815...	[more]

BLAST of CcUC11G209800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06255.1	6.6e-30	61.47	ELF4-like 3	[more]
AT1G17455.1	8.9e-27	65.31	ELF4-like 4	[more]
AT1G17455.2	8.9e-27	65.31	ELF4-like 4	[more]
AT1G72630.1	3.7e-25	63.92	ELF4-like 2	[more]
AT2G40080.1	3.2e-16	45.98	Protein of unknown function (DUF1313)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009741	Protein EARLY FLOWERING 4 domain	PFAM	PF07011	Elf4	coord: 46..124 e-value: 2.1E-38 score: 130.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..141
None	No IPR available	PANTHER	PTHR33469:SF17	PROTEIN ELF4-LIKE 3-LIKE	coord: 34..139
IPR040462	Protein EARLY FLOWERING 4	PANTHER	PTHR33469	PROTEIN ELF4-LIKE 4	coord: 34..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G209800.1	CcUC11G209800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009649	entrainment of circadian clock
biological_process	GO:0042753	positive regulation of circadian rhythm
cellular_component	GO:0005634	nucleus