CcUC11G209240 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC11G209240
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr11: 1312773 .. 1316985 (+)
RNA-Seq ExpressionCcUC11G209240
SyntenyCcUC11G209240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTCTTGGACCCATGCCCTCTAATAATATCAATGGTGGCTTTGGGATGTCTTGTCATGAATAGATATCTCGGAGGGAAAGCAGTTGCATACTCAACGATTGTCCAGGATTGTAGGAGTAAATAACATAATTAACATCCCTTTGAGAAGATTCTATCTGCCAACACAACTTACTCTTGAGGCTGATGATACACGTCTTGAAAAGTACTTTAGCTAAAGGATTTTGCTTAGTTAACATCAAGCTAATCAGGGCATCATTCTCCAGGACTACAGTATATGTAAACTACGAAGTTATACAGGAGCAAGCCACATTTGTTTTGGCGAGACAGACCATTGCCAATTCTAAAAGTGAGCTCTCATTTTCATAATTTTCAGCTTTCTAGAATATTTATCTTCTTTTGATGAACTAGATAAAACTTCTAAACCTGTACTAGACTCGACAACTTGGCCAATTTTCAGTAGAGAGATCTTATTTCCTGCTGACTTCTAATTGGACATTGCATGTTCTAATTGGTATAGTTGAAGTGTCTGTTTTTGCATAATTTAAATATTTCTCTGAATTTTCCATATGAAGATTAATTTTTTTGATTCAACATAATAGCTTAGAGCTTTGAACTTTTTGAAGTTAGTCGAAGTTTAACCAACGTCATCTTGGTGCATTCAATCGTATGAATTCTACTGTCTCTAAATCACCAACTTTCTATATCTACTAATCTTGGGATTGCTGAATAAAGATGTGCTTGATTGGGAATTGCCATCTTTACTTGTATTGCTTGATTATGAGCTCATTCAGGCTGATTTTTACCTCATTTAGACCTTGACAACCTTTCTTTTTGTAGGCAAAAGTGTTTTACTTTATACCTTTGCTCCTTGATCAGAACGTGAAATTGACAACAATTTTTGCTAAAAGGCTTGGACTGGAGGCCTCATGTTTTACGACTTGACCAGCAGAGGCTTCCCTTTTACCTCCAGTATTACAAACTGTGAAGGTTGTTCGTACAACAGGTTTTGAGCTCACAAAACAACTTGAATTTCGTGAGATTATGGGTGTGTTTGTAATACATTTTTCAAGTGTTTAATTTAAAAAGTAAGTCATTTTGAGAAAAATTTAGTTATAGTTTTTTTTCTTCTTTTTTCTTTCTAAGAACAATCGAAGTGAGTGAGATTCGAATCCCAGATTTCATTAGATTTAGGGCAATTTGATTGAATTAACTCCTTTTAATTAGATTTGGATATCTCACCATCTAATTATTAGGTTAAAATTTCAAAATATGATATATGGATACTTCTCTCATCAAATCATATTGTAAGGTGCACATCTTAATTCAATTAATCATATACGAAGTGCATTACTAAGTAGATCTCATTGTACTAAAAAAGAAACATATATCTCATAGCCATAGTTTAATTTTTGGGGCAGTTGTAAATATAACAATTAGACCCAAAGTATTAATAGATATAAGACAAAAAAATTTGCAGATATAGCAAATTTAAGATCTAGTTCTCAGAGTTTTTTCCATGATAGACTATATTACCGATAGATTTTGCTACATTTGCAATTATTAAAAAATATTGGTATATACCTAATTATTAACCATAAATGTGCTACCCATTGCAATTACCTTAATTTTAATTTCATTGATGAAGCAAAACTAAGAACCAGTACATACAATGATATTCCAGTCAAAATAGTGGAAGATTAATATAAATGGATTAGGGAAAGAGAGAGTATACCAAATAACTTAGTTCCTTCTTTTCTTGGTAACTAAAAAAAAATGAGAAGAAAAAAAAGAAGATAAAGTTATCTGGTATATGTACTGACATGAAGATATATATATATATATATATATATATATATTTTGAAGAGGCCCTAGAAAGTGATCAAATCAGGTAATTCTTGTTTATAATTTGGTAGAGAAACAACACTCAAATGGGAAGAAGAACAAGTTGGAAAATTGTGATCTTGAAAAGTAGTTCTTGATGAACAATCTCCATCAAATATCTCCCATTTGTCTGTTATCACAGTCTTCAATACCCTTTTATTTGACCCTTTCTTTCTAATTTCTTCTCCATTATTATTGTTGTTATTATCCTCTCTCATCACAAAAACCCCCATTTTCTCTTCTTCAATAACCTCACTATTTTTTCTTTTCCCATTATTATTATTGACACTTCCATTGATGATTTGCTCAAGCTCTTTAATATCTTCTTCTGAGATCTTCTCCAATTTTGGGCACTCAGATGCATTCAAAACACCCATTTCTCTACATACCTCAAGATATTGAGACAAATCTTCAACTTGGGTTGCTGCTTTTTGGACAACACGAAGCGCCATCGATGCTTCGGTTTTCGCCGGTGTCGCGTAAATTTTCAACAAAGCTTGTGCAATTCCGTTGCAAATTCGGCTGTAAATGTCGAAAACTTCTACGATGAGATTGTTCATGGCTTCTAAAACTAAACCAACCTGTTAGAATATGATCCATAAAAAACATTAAACTTGAGAGTAATTGCATTAAGTAGAACTTTGAGGGATAATATAATTAAATGTATATCAATATTTAAAAAAAATTGCAAATATATCAAAATCCATCGATGGTTGATTCTATCGTTGATGGACTCCTACTAGTGATACAGTTTATCACTAATAATGATAATAGAATTCGAAAGCAGTATATAAATTTTCCATATTTGCAAATTAGTTTGCATTGTACTATATTTGCAAATATCTTGAACTCGATAGCTATATTTGCAACTACCTCTGAACTTTACTCTCCTTCTGCATGGGTTGGTAGTTTGATACATGCTAATAAATATGTGAATATGTTTTAAAAGATTTAGAGTGAAAATGCAAATAATTTTTGAAAAAATCAACAATAAACAAGCAATAAGGACTAAATTTAAGATAGGAAAAAAACTTGGGTGCTACCTAGATTGCGACGGTCTTTGTACAGCCAAGGCAATTGCCCAATAATATTTTGTCATAAAGCAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTAAGAAATTGAGTTGTTTTTATTATTATTCTTTTTACTATCTACCAAGAATGCGTGCAATTAGAAGTTACACCGAATTATTGTCCTTTTAAGATATATTGAAAGGATAAAAATTAAAATTGAACAAACTTAAGAATTTAGAGGCCAAAATGGTATTTTAACCTATTCGTCCGGCTTATAAACAATATTATATATGTTTGAAGAGAGAGAAGTTGGTAGGGTTAACACACCTTCATGTTGTCGTCCAGTGGTCGAACCTGAAGCAACATATCCAACATAGACTGCCAACTTTGAATCTTAATCAACTCCTCCAACAATGAGAGCTTCAACCCTTTCTTGAAATTCTTAGCCTCAGAACATATAAACGATGACTTTTGATCCAAATATGCATAATAGCTTCTCACAAACGCATCATAACCCCAAGTTTTAGAAGGACTGGAATGACCATCTTTGAAGCTTGAGAGATCGAACGGCAGCCGTCCGATCCGCTGGACCGACGGTATTTGGCAACAAAAAACACCATGGATAAGAATAAGACCCTTTAGGGCAACAACCCAACTTCGAGTTTTTTCCATTCGGGTCGAGAGGCCCCACGCGAGAGGCTTGAGGTAGATCGGGGAGGTTCGGATCCATTCGAAGACGCGGCGGGCATTGGTGTAGTCGATTTTAGCACCGTCGTGGCTGGTGGCTCGGATGATTGCAGCCTCAAGGTCGGGGTGGCGGTACGGCGTGCGGCGGGAAAGGCTGGCCAGCCAAATGCTATTTCGGTCTTTGATTGCTCCGGCAGCCTTTCGCCATAGCTTCATTCTCCGGGGACGACAGCAATGGCGGCGCAGCGACCGGGGAGGCTTTTGTTTTTTAA

mRNA sequence

ATGAGGGCATCATTCTCCAGGACTACAGTATATGTAAACTACGAAGTTATACAGGAGCAAGCCACATTTGTTTTGGCGAGACAGACCATTGCCAATTCTAAAAAGGCCCTAGAAAGTGATCAAATCAGCTTGAGAGATCGAACGGCAGCCGTCCGATCCGCTGGACCGACGGGCAACAACCCAACTTCGAGTTTTTTCCATTCGGGTCGAGAGGCCCCACGCGAGAGGCTTGAGGTAGATCGGGGAGGTTCGGATCCATTCGAAGACGCGGCGGGCATTGGTGTAGTCGATTTTAGCACCGTCGTGGCTGGTGGCTCGGATGATTGCAGCCTCAAGGTCGGGGTGGCGGTACGGCGTGCGGCGGGAAAGGCTGGCCAGCCAAATGCTATTTCGCCTTTCGCCATAGCTTCATTCTCCGGGGACGACAGCAATGGCGGCGCAGCGACCGGGGAGGCTTTTGTTTTTTAA

Coding sequence (CDS)

ATGAGGGCATCATTCTCCAGGACTACAGTATATGTAAACTACGAAGTTATACAGGAGCAAGCCACATTTGTTTTGGCGAGACAGACCATTGCCAATTCTAAAAAGGCCCTAGAAAGTGATCAAATCAGCTTGAGAGATCGAACGGCAGCCGTCCGATCCGCTGGACCGACGGGCAACAACCCAACTTCGAGTTTTTTCCATTCGGGTCGAGAGGCCCCACGCGAGAGGCTTGAGGTAGATCGGGGAGGTTCGGATCCATTCGAAGACGCGGCGGGCATTGGTGTAGTCGATTTTAGCACCGTCGTGGCTGGTGGCTCGGATGATTGCAGCCTCAAGGTCGGGGTGGCGGTACGGCGTGCGGCGGGAAAGGCTGGCCAGCCAAATGCTATTTCGCCTTTCGCCATAGCTTCATTCTCCGGGGACGACAGCAATGGCGGCGCAGCGACCGGGGAGGCTTTTGTTTTTTAA

Protein sequence

MRASFSRTTVYVNYEVIQEQATFVLARQTIANSKKALESDQISLRDRTAAVRSAGPTGNNPTSSFFHSGREAPRERLEVDRGGSDPFEDAAGIGVVDFSTVVAGGSDDCSLKVGVAVRRAAGKAGQPNAISPFAIASFSGDDSNGGAATGEAFVF
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC11G209240.1CcUC11G209240.1mRNA