CcUC11G208380 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC11G208380
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr11: 331615 .. 332776 (+)
RNA-Seq ExpressionCcUC11G208380
SyntenyCcUC11G208380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCACAGTTATTGAGAGGAATTTGAAGAAATTTTGAGCAGTGATAGAGATGAGCGTGCGTGCGGTGTTGAAGTTCAAGTGTGGCATGAAGCCCTTTGCAGATGCGTTTCTCCGTCTCTGTAGACTGGATGAGAATAGGCTTGAATGGGAAGGCAGTCCCACCACCTTTTCTTTAATAACGACTCAACCACCCATGAGCTTATCCATTTCACTTCAATTCATGCCGGATTTCTTCACCTATTATCTCTGCCACCAACACTTACTACGAAACAATTCCCATGGATGAATTCTCGAGTACCATTTTCACTTTTCAGGAAATCGGTTTCTCCAAATTCACATTCTCATATCAATTACATACACGTAGTATCGAACTCAAGATTAAAGGTATATTTTTATTTGAATTAATATTGTTTCTTACATCAAATCTTCATCTATCTATCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTAGATGGCCAAGGAGGCCACATTGTTAGGTCAATACCTAGCGCGCTACAACCTACGTTCACAAGATCTCCAGCCAAAATAATTGACTATACCACTTTTGTTATATTTCGTTTACCTGATTTTAGACAAATTTTGACCGAGTTAAATGGACGATCAGGTAATCTTACTATCCCATATACTACTTTAATTTTCCCTTCCCTCCAAAACACTAACGTAATTCATTTGCATGCCAGCCCTTGTTACACTCACAAATTCCCATATCACCTTCAAACTTCCTACTCAGGATGGCAACCAGGTGTGTTAAGAATATTGATTCTATATAAATAATTGTATATTTATTGTAATAAAAAATGAAAGAAAAAAGTTTGAGAAAAAATTATGCCATTTAATATATACAACCGTGTGCTTTGTTACACACAGGACAACTTAATTACTTTATAACTCTCAAGTATCTTTTACTTCCAAAATAACCCATTTGGTAAAACACATCCTAACTCAACTCATATCAGAATATCCACGTCAATATTGGGACCATTTTATTTTCCTAGATTTGTATAGTTATTGTTTTATATTTTGCAGAGTTGCATAATTGCGGGTGTAAGCCCCGGGAAAAGAATTCAATCCCCAATCACGCTCAATCCTGTTGATTTCTACTTCAATTTCACGTCTGAAGCAGAACAAAGCCTA

mRNA sequence

TCCACAGTTATTGAGAGGAATTTGAAGAAATTTTGAGCAGTGATAGAGATGAGCGTGCGTGCGGTGTTGAAGTTCAAGTGTGGCATGAAGCCCTTTGCAGATGCGTTTCTCCGTCTCTGTAGACTGGATGAGAATAGGCTTGAATGGGAAGGCAGTCCCACCACCTTTTCTTTAATAACGACTCAACCACCCATGAGCTTATCCATTTCACTTCAATTCATGCCGGATTTCTTCACCTATTATCTCTGCCACCAACACTTACTACGAAACAATTCCCATGGATGAATTCTCGAGTACCATTTTCACTTTTCAGGAAATCGGTTTCTCCAAATTCACATTCTCATATCAATTACATACACGTAGTATCGAACTCAAGATTAAAGATGGCCAAGGAGGCCACATTGTTAGGTCAATACCTAGCGCGCTACAACCTACGTTCACAAGATCTCCAGCCAAAATAATTGACTATACCACTTTTGTTATATTTCGTTTACCTGATTTTAGACAAATTTTGACCGAGTTAAATGGACGATCAGCCCTTGTTACACTCACAAATTCCCATATCACCTTCAAACTTCCTACTCAGGATGGCAACCAGAGTTGCATAATTGCGGGTGTAAGCCCCGGGAAAAGAATTCAATCCCCAATCACGCTCAATCCTGTTGATTTCTACTTCAATTTCACGTCTGAAGCAGAACAAAGCCTA

Coding sequence (CDS)

ATGGATGAATTCTCGAGTACCATTTTCACTTTTCAGGAAATCGGTTTCTCCAAATTCACATTCTCATATCAATTACATACACGTAGTATCGAACTCAAGATTAAAGATGGCCAAGGAGGCCACATTGTTAGGTCAATACCTAGCGCGCTACAACCTACGTTCACAAGATCTCCAGCCAAAATAATTGACTATACCACTTTTGTTATATTTCGTTTACCTGATTTTAGACAAATTTTGACCGAGTTAAATGGACGATCAGCCCTTGTTACACTCACAAATTCCCATATCACCTTCAAACTTCCTACTCAGGATGGCAACCAGAGTTGCATAATTGCGGGTGTAAGCCCCGGGAAAAGAATTCAATCCCCAATCACGCTCAATCCTGTTGATTTCTACTTCAATTTCACGTCTGAAGCAGAACAAAGCCTA

Protein sequence

MDEFSSTIFTFQEIGFSKFTFSYQLHTRSIELKIKDGQGGHIVRSIPSALQPTFTRSPAKIIDYTTFVIFRLPDFRQILTELNGRSALVTLTNSHITFKLPTQDGNQSCIIAGVSPGKRIQSPITLNPVDFYFNFTSEAEQSL
Homology
BLAST of CcUC11G208380 vs. NCBI nr
Match: XP_022928046.1 (uncharacterized protein LOC111434948 [Cucurbita moschata])

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-06
Identity = 51/155 (32.90%), Postives = 70/155 (45.16%), Query Frame = 0

Query: 1   MDEFSSTIFTFQEIGFSKFTFSYQLHTRSIELKIKDGQGGHIVRSIPSALQPTFTRSPAK 60
           +D+F  TI   +   FS  T S   H R   ++           S PS + P     P  
Sbjct: 72  IDDFYMTIVEQRTNRFSSVTLSIAEHQRHFAMEF----------SPPSLVHPRTKLIPTS 131

Query: 61  ---------IIDYTTFVIFRLPDFRQILTEL-NGRSALVTLTNSHITF-------KLPTQ 120
                     IDY +FV F L  FR+++T L N   A +T+TNS I F        L TQ
Sbjct: 132 PPERDINEGAIDYASFVSFDLFHFRRLVTGLENNEHAYLTITNSQIKFLVEDVEVVLTTQ 191

Query: 121 DGNQSCIIAGVSPGKRIQSPITLNPVDFYFNFTSE 139
              + CII G + G   +S + L P +F++NFTSE
Sbjct: 192 --RKECIIGGFAAGDEFESAMCLCPWEFFYNFTSE 214

BLAST of CcUC11G208380 vs. NCBI nr
Match: XP_031744098.1 (uncharacterized protein LOC116404778 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-06
Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 0

Query: 62  IDYTTFVIFRLPDFRQILTELNGRSALVTLTNSHITF-----KLPTQDGNQSCIIAGVSP 121
           I+YTTFV     DFR+I +ELN RS  VT TNS + F     ++        C+I GV  
Sbjct: 94  IEYTTFVSIDSRDFRRIASELNSRSVSVTFTNSRVNFFNKNKEITFSKEENQCVIGGVEE 153

Query: 122 GKRIQSPITLNPVDFYFNFTSEAEQ 142
           G+  +  IT++P+ F+ + +S++++
Sbjct: 154 GEEFRFIITVHPLVFFLDLSSQSKR 178

BLAST of CcUC11G208380 vs. NCBI nr
Match: XP_023513336.1 (uncharacterized protein LOC111777844 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 61.6 bits (148), Expect = 6.3e-06
Identity = 50/155 (32.26%), Postives = 70/155 (45.16%), Query Frame = 0

Query: 1   MDEFSSTIFTFQEIGFSKFTFSYQLHTRSIELKIKDGQGGHIVRSIPSALQPTFTRSPAK 60
           +D+F  TI   +   FS  T S   H R   ++           S PS + P     P  
Sbjct: 72  IDDFYMTIVEQRTNRFSSVTLSIAEHQRHFAMEF----------SPPSLVHPRTKLIPTS 131

Query: 61  ---------IIDYTTFVIFRLPDFRQILTEL-NGRSALVTLTNSHITF-------KLPTQ 120
                     IDY +FV F L  FR+++T L N   A +T+T+S I F        L TQ
Sbjct: 132 PPERGINEGAIDYASFVSFDLFHFRRLVTGLENNEHAYLTITDSQIKFLVEDVEVVLTTQ 191

Query: 121 DGNQSCIIAGVSPGKRIQSPITLNPVDFYFNFTSE 139
                CII G + G+  +S + L P +F++NFTSE
Sbjct: 192 --RNECIIGGFAAGEEFESAMCLCPWEFFYNFTSE 214

BLAST of CcUC11G208380 vs. NCBI nr
Match: KAG6571417.1 (hypothetical protein SDJN03_30332, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-05
Identity = 50/155 (32.26%), Postives = 69/155 (44.52%), Query Frame = 0

Query: 1   MDEFSSTIFTFQEIGFSKFTFSYQLHTRSIELKIKDGQGGHIVRSIPSALQPTFTRSPAK 60
           +D+F  TI   +   FS  T S   H R   ++           S PS + P     P  
Sbjct: 551 IDDFYMTIVEQRTNRFSSVTLSIAEHQRHFAMEF----------SPPSLVYPRTKLIPTS 610

Query: 61  ---------IIDYTTFVIFRLPDFRQILTEL-NGRSALVTLTNSHITF-------KLPTQ 120
                     IDY +FV F L  FR+++T L N   A +T+T+S I F        L TQ
Sbjct: 611 PPERDINEGAIDYASFVSFDLFHFRRLVTGLENNEHAYLTITDSQIKFLVEDVEVVLTTQ 670

Query: 121 DGNQSCIIAGVSPGKRIQSPITLNPVDFYFNFTSE 139
                CII G + G   +S + L P +F++NFTSE
Sbjct: 671 --RNECIIGGFAAGDEFESAMCLCPWEFFYNFTSE 693

BLAST of CcUC11G208380 vs. NCBI nr
Match: XP_022971718.1 (uncharacterized protein LOC111470385 [Cucurbita maxima])

HSP 1 Score: 58.9 bits (141), Expect = 4.1e-05
Identity = 49/155 (31.61%), Postives = 69/155 (44.52%), Query Frame = 0

Query: 1   MDEFSSTIFTFQEIGFSKFTFSYQLHTRSIELKIKDGQGGHIVRSIPSALQPTFTRSPAK 60
           +D+F  TI   +   FS  T S   + R   ++           S PS + P     P  
Sbjct: 72  IDDFYMTIVEQRSNRFSSLTLSIAENQRHFAMEF----------SPPSLVHPRTKLIPTS 131

Query: 61  ---------IIDYTTFVIFRLPDFRQILTEL-NGRSALVTLTNSHITFKLPTQD------ 120
                     IDY +FV F L  FR+++T L N   A +T+TNS I  KL  +D      
Sbjct: 132 PPERDINEGAIDYASFVSFDLFHFRRLVTGLENNEHAYLTITNSQI--KLWVEDLEVVLT 191

Query: 121 -GNQSCIIAGVSPGKRIQSPITLNPVDFYFNFTSE 139
                CII G + G   +S + L P +F++NFTSE
Sbjct: 192 TQRNECIIGGFAAGDEFESAMCLCPWEFFYNFTSE 214

BLAST of CcUC11G208380 vs. ExPASy TrEMBL
Match: A0A0A0K9W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002330 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.0e-06
Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 0

Query: 62  IDYTTFVIFRLPDFRQILTELNGRSALVTLTNSHITF-----KLPTQDGNQSCIIAGVSP 121
           I+YTTFV     DFR+I +ELN RS  VT TNS + F     ++        C+I GV  
Sbjct: 133 IEYTTFVSIDSRDFRRIASELNSRSVSVTFTNSRVNFFNKNKEITFSKEENQCVIGGVEE 192

Query: 122 GKRIQSPITLNPVDFYFNFTSEAEQ 142
           G+  +  IT++P+ F+ + +S++++
Sbjct: 193 GEEFRFIITVHPLVFFLDLSSQSKR 217

BLAST of CcUC11G208380 vs. ExPASy TrEMBL
Match: A0A6J1EJ67 (uncharacterized protein LOC111434948 OS=Cucurbita moschata OX=3662 GN=LOC111434948 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.0e-06
Identity = 51/155 (32.90%), Postives = 70/155 (45.16%), Query Frame = 0

Query: 1   MDEFSSTIFTFQEIGFSKFTFSYQLHTRSIELKIKDGQGGHIVRSIPSALQPTFTRSPAK 60
           +D+F  TI   +   FS  T S   H R   ++           S PS + P     P  
Sbjct: 72  IDDFYMTIVEQRTNRFSSVTLSIAEHQRHFAMEF----------SPPSLVHPRTKLIPTS 131

Query: 61  ---------IIDYTTFVIFRLPDFRQILTEL-NGRSALVTLTNSHITF-------KLPTQ 120
                     IDY +FV F L  FR+++T L N   A +T+TNS I F        L TQ
Sbjct: 132 PPERDINEGAIDYASFVSFDLFHFRRLVTGLENNEHAYLTITNSQIKFLVEDVEVVLTTQ 191

Query: 121 DGNQSCIIAGVSPGKRIQSPITLNPVDFYFNFTSE 139
              + CII G + G   +S + L P +F++NFTSE
Sbjct: 192 --RKECIIGGFAAGDEFESAMCLCPWEFFYNFTSE 214

BLAST of CcUC11G208380 vs. ExPASy TrEMBL
Match: A0A6J1I7S4 (uncharacterized protein LOC111470385 OS=Cucurbita maxima OX=3661 GN=LOC111470385 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05
Identity = 49/155 (31.61%), Postives = 69/155 (44.52%), Query Frame = 0

Query: 1   MDEFSSTIFTFQEIGFSKFTFSYQLHTRSIELKIKDGQGGHIVRSIPSALQPTFTRSPAK 60
           +D+F  TI   +   FS  T S   + R   ++           S PS + P     P  
Sbjct: 72  IDDFYMTIVEQRSNRFSSLTLSIAENQRHFAMEF----------SPPSLVHPRTKLIPTS 131

Query: 61  ---------IIDYTTFVIFRLPDFRQILTEL-NGRSALVTLTNSHITFKLPTQD------ 120
                     IDY +FV F L  FR+++T L N   A +T+TNS I  KL  +D      
Sbjct: 132 PPERDINEGAIDYASFVSFDLFHFRRLVTGLENNEHAYLTITNSQI--KLWVEDLEVVLT 191

Query: 121 -GNQSCIIAGVSPGKRIQSPITLNPVDFYFNFTSE 139
                CII G + G   +S + L P +F++NFTSE
Sbjct: 192 TQRNECIIGGFAAGDEFESAMCLCPWEFFYNFTSE 214

BLAST of CcUC11G208380 vs. ExPASy TrEMBL
Match: A0A6J1L3R9 (uncharacterized protein LOC111498890 OS=Cucurbita maxima OX=3661 GN=LOC111498890 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.6e-05
Identity = 41/152 (26.97%), Postives = 75/152 (49.34%), Query Frame = 0

Query: 1   MDEFSSTIFTFQEIGFSKFTFSYQLHTRSIELKIKDGQGGHIVRSIPSALQPTFTRSPAK 60
           +++F  T+F  +  G+S   F        I L  ++ Q  H+    P  L      SP++
Sbjct: 35  IEKFYITMFHMELRGYSSMLFILIQAINKISLAFENPQ-SHLE---PKVLLRELDASPSE 94

Query: 61  -----IIDYTTFVIFRLPDFRQILTELNGRSALVTLTNSHITFKLPTQD-----GNQSCI 120
                 +DY TFV     DF++++ ELN  S  V+LT S I F +P ++       + CI
Sbjct: 95  GEQIAQVDYGTFVSIDSQDFKRVVHELNAPSVNVSLTASQIKFMVPRKEIVLTRRERGCI 154

Query: 121 IAGVSPGKRIQSPITLNPVDFYFNFTSEAEQS 143
             G+  G+  +  ITL+P+ F+ + + +++++
Sbjct: 155 TGGIPAGETFRFSITLHPLLFFHDLSHKSKRA 182

BLAST of CcUC11G208380 vs. ExPASy TrEMBL
Match: A0A6J1KUR4 (uncharacterized protein LOC111498889 OS=Cucurbita maxima OX=3661 GN=LOC111498889 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.4e-05
Identity = 45/145 (31.03%), Postives = 70/145 (48.28%), Query Frame = 0

Query: 4   FSSTIFT-FQEIGFSKFTFSYQLHTRSIELKIKDGQGGHIVRSIPSALQPTFTRSPAKII 63
           F+S  FT FQ +     TF    H   + L   D        S+P  L+        + I
Sbjct: 54  FTSMYFTLFQPLTKVLLTFQRSSHEPKVMLCELD--------SLPLELE------EMEHI 113

Query: 64  DYTTFVIFRLPDFRQILTELNGRSALVTLTNSHITFKLPTQD-----GNQSCIIAGVSPG 123
           DY TFV     DFR+I+ EL+  S  V+LTNS + F    ++       + CII G++ G
Sbjct: 114 DYGTFVSIDSQDFRRIVLELDVHSVHVSLTNSQVKFSASRKEIVLTKEERRCIIGGLAEG 173

Query: 124 KRIQSPITLNPVDFYFNFTSEAEQS 143
           K  +  ITL+P+ F+   + +A+++
Sbjct: 174 KEFEFSITLHPLVFFHELSYKAKRA 184

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022928046.12.2e-0632.90uncharacterized protein LOC111434948 [Cucurbita moschata][more]
XP_031744098.12.2e-0636.47uncharacterized protein LOC116404778 [Cucumis sativus][more]
XP_023513336.16.3e-0632.26uncharacterized protein LOC111777844 [Cucurbita pepo subsp. pepo][more]
KAG6571417.11.4e-0532.26hypothetical protein SDJN03_30332, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022971718.14.1e-0531.61uncharacterized protein LOC111470385 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K9W81.0e-0636.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002330 PE=4 SV=1[more]
A0A6J1EJ671.0e-0632.90uncharacterized protein LOC111434948 OS=Cucurbita moschata OX=3662 GN=LOC1114349... [more]
A0A6J1I7S42.0e-0531.61uncharacterized protein LOC111470385 OS=Cucurbita maxima OX=3661 GN=LOC111470385... [more]
A0A6J1L3R92.6e-0526.97uncharacterized protein LOC111498890 OS=Cucurbita maxima OX=3661 GN=LOC111498890... [more]
A0A6J1KUR43.4e-0531.03uncharacterized protein LOC111498889 OS=Cucurbita maxima OX=3661 GN=LOC111498889... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC11G208380.1CcUC11G208380.1mRNA