CcUC10G207900 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G207900
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Non-specific lipid-transfer protein
Location	CicolChr10: 34663613 .. 34664573 (+)
RNA-Seq Expression	CcUC10G207900
Synteny	CcUC10G207900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAACCACCCACCCTCCCTCCGGGTTGCGTCATAAATGCATGGGATGGGATGCAGTGTGAGGAGTTGGCTATATAAAGGGCGGCACCCGGAACGGTTTGATTCACAGAGACACAAACAGCAAAGAGAAACAAAAGGGAAAGAATTGAGTTAGTTAGAAGCAGAAGCATAGATTTAAAAATGGAGATGGAGAGGAGCATGAAGGTTTTGATGATTGTGGGAGTTGTGATGACGATGATGGTGGTGGGTGAAGCGGTTGTGACCTGCGGGTCAGTGGCTAGCTCGGTGGGGCCTTGCATTTCATATTTGCAAGGCTCATCACAAGGTGTCCCACCAGCATGTTGCAGTGGGATTAAGTCTCTCAAGTCCCAAGCCTCCACCCCTATCGATCGCCGCACCGCTTGCACCTGTTTGAAGAATGCTGCCAACCGCATCCCTGGCATCAACTATGGCTTAGCCGCTGGTCTTCCCGGCAGGTGTGGCGTCAGCATTCCTTACAAGATCAGCCCCAGCACCGACTGCTCCAGGTAATGTGTTCTCTACTACTACTACTACTACTACTTTTAATTAATTTGTTAGCCATCCATCGCTTTTTTGTAATTCTTGTTTTAATTTGCAGGGTGAACTAAGGAAGGATCCACCTCCCCCACAGCCATCTGCGTCTATAGTAATAATATCATATTTGTAGCGGTAGCTTTTTAAATTAAATACCATATTATGAAATGAATAAAAAAGCATGGGTGCTACGGTTTCTTCATAATTAATTCCCATGCCCCACTCTTCCCAACCTTATATCTTCTTCTTCTTCTTCTTCTTTATTTCTACTTTGTAGTACTGTTGTGTGTATGAGATTCCAATGACTCCTCTCATTGTGAATTCCAAATATCATTATAATTCCAATAAACTATTTCCTCACTTTCTTCTACACTCTACTCTTCATTTCCTCACATCTTCCCCAATA

mRNA sequence

CAACAACCACCCACCCTCCCTCCGGGTTGCGTCATAAATGCATGGGATGGGATGCAGTGTGAGGAGTTGGCTATATAAAGGGCGGCACCCGGAACGGTTTGATTCACAGAGACACAAACAGCAAAGAGAAACAAAAGGGAAAGAATTGAGTTAGTTAGAAGCAGAAGCATAGATTTAAAAATGGAGATGGAGAGGAGCATGAAGGTTTTGATGATTGTGGGAGTTGTGATGACGATGATGGTGGTGGGTGAAGCGGTTGTGACCTGCGGGTCAGTGGCTAGCTCGGTGGGGCCTTGCATTTCATATTTGCAAGGCTCATCACAAGGTGTCCCACCAGCATGTTGCAGTGGGATTAAGTCTCTCAAGTCCCAAGCCTCCACCCCTATCGATCGCCGCACCGCTTGCACCTGTTTGAAGAATGCTGCCAACCGCATCCCTGGCATCAACTATGGCTTAGCCGCTGGTCTTCCCGGCAGGTGTGGCGTCAGCATTCCTTACAAGATCAGCCCCAGCACCGACTGCTCCAGGGTGAACTAAGGAAGGATCCACCTCCCCCACAGCCATCTGCGTCTATAGTAATAATATCATATTTGTAGCGGTAGCTTTTTAAATTAAATACCATATTATGAAATGAATAAAAAAGCATGGGTGCTACGGTTTCTTCATAATTAATTCCCATGCCCCACTCTTCCCAACCTTATATCTTCTTCTTCTTCTTCTTCTTTATTTCTACTTTGTAGTACTGTTGTGTGTATGAGATTCCAATGACTCCTCTCATTGTGAATTCCAAATATCATTATAATTCCAATAAACTATTTCCTCACTTTCTTCTACACTCTACTCTTCATTTCCTCACATCTTCCCCAATA

Coding sequence (CDS)

ATGGAGATGGAGAGGAGCATGAAGGTTTTGATGATTGTGGGAGTTGTGATGACGATGATGGTGGTGGGTGAAGCGGTTGTGACCTGCGGGTCAGTGGCTAGCTCGGTGGGGCCTTGCATTTCATATTTGCAAGGCTCATCACAAGGTGTCCCACCAGCATGTTGCAGTGGGATTAAGTCTCTCAAGTCCCAAGCCTCCACCCCTATCGATCGCCGCACCGCTTGCACCTGTTTGAAGAATGCTGCCAACCGCATCCCTGGCATCAACTATGGCTTAGCCGCTGGTCTTCCCGGCAGGTGTGGCGTCAGCATTCCTTACAAGATCAGCCCCAGCACCGACTGCTCCAGGGTGAACTAA

Protein sequence

MEMERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN

Homology

[Close]

BLAST of CcUC10G207900 vs. NCBI nr
Match: XP_022935125.1 (non-specific lipid-transfer protein 1-like [Cucurbita moschata])

HSP 1 Score: 167.5 bits (423), Expect = 6.7e-38
Identity = 83/116 (71.55%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 3   MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLK 62
           MERSMK+ +IVGVV+  MVVGEA ++CG+VA SV PCISYL+  S GVP ACC+GI+SL 
Sbjct: 1   MERSMKMAIIVGVVLMCMVVGEAAISCGTVARSVSPCISYLKNPSSGVPAACCNGIRSLN 60

Query: 63  SQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN 119
           SQAST +DRRTACTCLK+AAN I GIN+  A+ LP +CGVSIPYKISPSTDCS+VN
Sbjct: 61  SQASTSVDRRTACTCLKSAANSISGINFNAASSLPSKCGVSIPYKISPSTDCSKVN 116

[Close]

BLAST of CcUC10G207900 vs. NCBI nr
Match: XP_038902996.1 (non-specific lipid-transfer protein 1-like [Benincasa hispida])

HSP 1 Score: 167.2 bits (422), Expect = 8.8e-38
Identity = 83/118 (70.34%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 1   MEMERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKS 60
           MEMERSMKV+MIVGVVM  MVV EA ++CG+VA +VGPCI YL+  +   PPACC+G+++
Sbjct: 1   MEMERSMKVMMIVGVVMMCMVVSEAAISCGAVAGAVGPCIGYLKAPTGIPPPACCNGVRN 60

Query: 61  LKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN 119
           LKSQASTP DRR AC CLKNAAN I GI+ G AAGLP +CGVSIPYKISP+TDC++VN
Sbjct: 61  LKSQASTPADRRAACYCLKNAANSIRGIDVGAAAGLPSKCGVSIPYKISPNTDCTKVN 118

[Close]

BLAST of CcUC10G207900 vs. NCBI nr
Match: XP_023528122.1 (non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 82/116 (70.69%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 3   MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLK 62
           MERSMK+ +IVGVV+  MVVGEA +TCG+VASSV PCI YL+  S GVP ACC+GI+SL 
Sbjct: 1   MERSMKMAIIVGVVLMCMVVGEAAITCGAVASSVAPCIPYLKNPSSGVPAACCNGIRSLN 60

Query: 63  SQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN 119
           SQAST +DRRTACTCLK+AA+ IPGIN+  A+ LP +CGV IPYKISPSTDC++VN
Sbjct: 61  SQASTSVDRRTACTCLKSAASSIPGINFNAASSLPSQCGVRIPYKISPSTDCNKVN 116

[Close]

BLAST of CcUC10G207900 vs. NCBI nr
Match: XP_022982607.1 (non-specific lipid-transfer protein 1-like [Cucurbita maxima])

HSP 1 Score: 163.3 bits (412), Expect = 1.3e-36
Identity = 80/116 (68.97%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 3   MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLK 62
           MERSMK+ ++VGVV+  MVVGEA ++CG+VASSV PCI YL+  S G+P ACCSGI+SL 
Sbjct: 1   MERSMKMAIVVGVVLMCMVVGEAAISCGTVASSVAPCIPYLRNPSTGLPAACCSGIRSLN 60

Query: 63  SQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN 119
           SQAST  DRRTAC CLK+AAN + GINY  A+ LP +CGVSIPYKISPSTDC++VN
Sbjct: 61  SQASTSADRRTACNCLKSAANSVSGINYNAASSLPSKCGVSIPYKISPSTDCNKVN 116

[Close]

BLAST of CcUC10G207900 vs. NCBI nr
Match: KAG7017187.1 (hypothetical protein SDJN02_19049 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.8 bits (403), Expect = 1.4e-35
Identity = 78/116 (67.24%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 3   MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLK 62
           MERSMK+ +IVGVV+  MVVGEA +TCG+V +S+ PCI YL+  S GVP ACC+GI+SL 
Sbjct: 1   MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLN 60

Query: 63  SQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN 119
           SQAST +DRR ACTCLK+AAN I GIN+  A+ LP +CGV IPYKISPSTDC++VN
Sbjct: 61  SQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKISPSTDCNKVN 116

[Close]

BLAST of CcUC10G207900 vs. ExPASy Swiss-Prot
Match: Q43194 (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor OX=4558 GN=LTP2 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.8e-28
Identity = 66/122 (54.10%), Postives = 80/122 (65.57%), Query Frame = 0


Query: 3   MERSMKVLMIVGVVMTMMVV------GEAVVTCGSVASSVGPCISYLQGSSQGVPPACCS 62
           M RSMK+ + + VV     V       EA VTCG V+S++GPC+SY +G   G    CCS
Sbjct: 1   MARSMKLAVAIAVVAAAAAVVLAATTSEAAVTCGQVSSAIGPCLSYARGQGSGPSAGCCS 60

Query: 63  GIKSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSR 119
           G++SL S A T  DRR AC CLKNAA  I G+N G AA +P +CGVSIPY IS STDCSR
Sbjct: 61  GVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSR 120

[Close]

BLAST of CcUC10G207900 vs. ExPASy Swiss-Prot
Match: P85105 (Non-specific lipid-transfer protein P5 OS=Vitis sp. OX=3604 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.2e-27
Identity = 56/92 (60.87%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 27  VTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRTACTCLKNAANRIP 86
           ++CG VA+ + PCI+YL+ S+  +P ACC+G+K+LK+ A+T  DRRTAC CL NA+  I 
Sbjct: 1   LSCGDVATQLAPCINYLR-SAGPLPVACCNGVKNLKNSAATTQDRRTACKCLINASKSIS 60

Query: 87  GINYGLAAGLPGRCGVSIPYKISPSTDCSRVN 119
           G+N+GLAAGLPG+CGV+IPYKISPST+C +VN
Sbjct: 61  GVNFGLAAGLPGKCGVNIPYKISPSTNCDQVN 91

[Close]

BLAST of CcUC10G207900 vs. ExPASy Swiss-Prot
Match: Q42762 (Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.5e-27
Identity = 66/113 (58.41%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 10  LMIVGVVMTMMVVG----EAVVTCGSVASSVGPCISYLQGSSQG-VPPACCSGIKSLKSQ 69
           L +  VV+  MVVG    +  VT G V +S+ PCI+YL+GS  G VPP CC+GIKSL S 
Sbjct: 3   LKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSA 62

Query: 70  ASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRV 118
           A T   R+ AC C+K+AA  I GIN+GLA+GLPG+CGV+IPYKISPSTDC+ V
Sbjct: 63  AQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSV 115

[Close]

BLAST of CcUC10G207900 vs. ExPASy Swiss-Prot
Match: P19656 (Non-specific lipid-transfer protein OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.5e-27
Identity = 58/107 (54.21%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 12  IVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDR 71
           +V +V+      EA ++CG VAS++ PCISY +G   G    CCSG++SL + A T  DR
Sbjct: 14  VVALVLLAAATSEAAISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADR 73

Query: 72  RTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN 119
           R AC CLKNAA  + G+N G AA +P +CGVSIPY IS STDCSRVN
Sbjct: 74  RAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN 120

[Close]

BLAST of CcUC10G207900 vs. ExPASy Swiss-Prot
Match: Q43129 (Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.4e-27
Identity = 66/119 (55.46%), Postives = 85/119 (71.43%), Query Frame = 0


Query: 3   MERSMKVLMIVGVVMTMMV---VGEAVVTCGSVASSVGPCISYLQGSSQG-VPPACCSGI 62
           M  SM + +   VV+ M+V   + +  VT G V +S+ PCI+YL+GS  G VPP CC+GI
Sbjct: 1   MASSMSLKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGI 60

Query: 63  KSLKSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRV 118
           KSL S A T   R+ AC C+K+AA  I GIN+GLA+GLPG+CGV+IPYKISPSTDC+ V
Sbjct: 61  KSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSV 119

[Close]

BLAST of CcUC10G207900 vs. ExPASy TrEMBL
Match: A0A6J1F9Q5 (Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC111442087 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.2e-38
Identity = 83/116 (71.55%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 3   MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLK 62
           MERSMK+ +IVGVV+  MVVGEA ++CG+VA SV PCISYL+  S GVP ACC+GI+SL 
Sbjct: 1   MERSMKMAIIVGVVLMCMVVGEAAISCGTVARSVSPCISYLKNPSSGVPAACCNGIRSLN 60

Query: 63  SQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN 119
           SQAST +DRRTACTCLK+AAN I GIN+  A+ LP +CGVSIPYKISPSTDCS+VN
Sbjct: 61  SQASTSVDRRTACTCLKSAANSISGINFNAASSLPSKCGVSIPYKISPSTDCSKVN 116

[Close]

BLAST of CcUC10G207900 vs. ExPASy TrEMBL
Match: A0A6J1IX25 (Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 6.1e-37
Identity = 80/116 (68.97%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 3   MERSMKVLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLK 62
           MERSMK+ ++VGVV+  MVVGEA ++CG+VASSV PCI YL+  S G+P ACCSGI+SL 
Sbjct: 1   MERSMKMAIVVGVVLMCMVVGEAAISCGTVASSVAPCIPYLRNPSTGLPAACCSGIRSLN 60

Query: 63  SQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN 119
           SQAST  DRRTAC CLK+AAN + GINY  A+ LP +CGVSIPYKISPSTDC++VN
Sbjct: 61  SQASTSADRRTACNCLKSAANSVSGINYNAASSLPSKCGVSIPYKISPSTDCNKVN 116

[Close]

BLAST of CcUC10G207900 vs. ExPASy TrEMBL
Match: A0A5D3DMS3 (Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00250 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-33
Identity = 80/117 (68.38%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 3   MERSMKVLMIVGVVMTMMVV-GEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSL 62
           ME  +K LMIVG+VM  MVV GEA VTCGSVA+++GPCI YL+  S  VP  CCSGI+SL
Sbjct: 1   MEMKLKGLMIVGIVMMCMVVLGEAAVTCGSVATAMGPCIPYLRSPSASVPAGCCSGIRSL 60

Query: 63  KSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN 119
             QA+T  DRRTAC CLK+AA  I GINY  AAGLPG+CGVSI Y ISP+TDCSRVN
Sbjct: 61  NGQAATTADRRTACNCLKSAAKSISGINYKAAAGLPGKCGVSISYPISPNTDCSRVN 117

[Close]

BLAST of CcUC10G207900 vs. ExPASy TrEMBL
Match: A0A1S3B5F4 (Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103486230 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-33
Identity = 80/117 (68.38%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 3   MERSMKVLMIVGVVMTMMVV-GEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSL 62
           ME  +K LMIVG+VM  MVV GEA VTCGSVA+++GPCI YL+  S  VP  CCSGI+SL
Sbjct: 1   MEMKLKGLMIVGIVMMCMVVLGEAAVTCGSVATAMGPCIPYLRSPSASVPAGCCSGIRSL 60

Query: 63  KSQASTPIDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN 119
             QA+T  DRRTAC CLK+AA  I GINY  AAGLPG+CGVSI Y ISP+TDCSRVN
Sbjct: 61  NGQAATTADRRTACNCLKSAAKSISGINYKAAAGLPGKCGVSISYPISPNTDCSRVN 117

[Close]

BLAST of CcUC10G207900 vs. ExPASy TrEMBL
Match: A0A7N0ZQW0 (Non-specific lipid-transfer protein OS=Kalanchoe fedtschenkoi OX=63787 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.3e-30
Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 9   VLMIVGVVMTMMVVGEAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTP 68
           V+++  +V +     EA VTCG+VASS+ PC+ YL+GS   VP ACCSGIKSL + AST 
Sbjct: 14  VVLLALMVASAGTTTEAAVTCGTVASSINPCLDYLKGSVAAVPGACCSGIKSLNAAASTT 73

Query: 69  IDRRTACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRV 118
            DR+TAC CLK+AA+ I GINYGLAAGLPG+CGVSIPYKISPSTDC++V
Sbjct: 74  PDRQTACECLKSAASSISGINYGLAAGLPGKCGVSIPYKISPSTDCNQV 122

[Close]

BLAST of CcUC10G207900 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 )

HSP 1 Score: 104.8 bits (260), Expect = 5.0e-23
Identity = 51/105 (48.57%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 15  VVMTMMVVG--EAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRR 74
           +V+T+ +V   +A ++CG+VA S+ PC +YL      VPP+CC+G+K+L S A T  DR+
Sbjct: 11  LVLTVCIVASVDAAISCGTVAGSLAPCATYLSKGGL-VPPSCCAGVKTLNSMAKTTPDRQ 70

Query: 75  TACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRV 118
            AC C+++ A  I G+N  LA+GLPG+CGVSIPY IS ST+C+ +
Sbjct: 71  QACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNI 114

[Close]

BLAST of CcUC10G207900 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 )

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22
Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 16  VMTMMVVG--EAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRRT 75
           V+T+ +V   +A +TCG+VASS+ PC+ YL      VPP CC+G+K L   A T  DR+ 
Sbjct: 12  VLTVFIVASVDAAITCGTVASSLSPCLGYLSKGGV-VPPPCCAGVKKLNGMAQTTPDRQQ 71

Query: 76  ACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRV 118
           AC CL++AA    G+N  LA+GLPG+CGVSIPY IS ST+C+ +
Sbjct: 72  ACRCLQSAAK---GVNPSLASGLPGKCGVSIPYPISTSTNCATI 111

[Close]

BLAST of CcUC10G207900 vs. TAIR 10
Match: AT2G38540.1 (lipid transfer protein 1 )

HSP 1 Score: 94.7 bits (234), Expect = 5.1e-20
Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 10  LMIVGVVMTMMVVGEAVVTCGSVASSVGPCISY-LQGSSQGVPPACCSGIKSLKSQASTP 69
           L++  +++   +   A ++CGSV S++  CI Y LQG    +PPACCSG+K+L S A T 
Sbjct: 10  LLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGV--IPPACCSGVKNLNSIAKTT 69

Query: 70  IDRRTACTCLKNAANRI-PGINYGLAAGLPGRCGVSIPYKISPSTDCSRV 118
            DR+ AC C++ AA  +  G+N G AAG+P  CGV+IPYKIS ST+C  V
Sbjct: 70  PDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTV 117

[Close]

BLAST of CcUC10G207900 vs. TAIR 10
Match: AT3G51590.1 (lipid transfer protein 12 )

HSP 1 Score: 85.5 bits (210), Expect = 3.1e-17
Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 15  VVMTMMVVG--EAVVTCGSVASSVGPCISYLQGSSQGVPPACCSGIKSLKSQASTPIDRR 74
           +V+T+ +    E+ + CG+V S++  C++YL  S   +P  CC G+KSL   A T  DR+
Sbjct: 12  IVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGP-LPSQCCVGVKSLYQLAQTTPDRK 71

Query: 75  TACTCLKNAANRIPGINYGLAAGLPGRCGVSIPYKISPSTDCSRVN 119
             C CLK A   I G+N  L A LP  CGVSIPY IS ST+C  ++
Sbjct: 72  QVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSIS 116

[Close]

BLAST of CcUC10G207900 vs. TAIR 10
Match: AT2G38530.1 (lipid transfer protein 2 )

HSP 1 Score: 85.1 bits (209), Expect = 4.1e-17
Identity = 50/117 (42.74%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 9   VLMIVGVVMTMMVV-----GEAVVTCGSVASSVGPCISYLQGSSQGVP--PACCSGIKSL 68
           V+ +  +V+  M+V       A+++CG+V  ++  CI+YL   ++G P    CC+G+ +L
Sbjct: 4   VMKLACMVLACMIVAGPITANALMSCGTVNGNLAGCIAYL---TRGAPLTQGCCNGVTNL 63

Query: 69  KSQASTPIDRRTACTCLKNAANRI-PGINYGLAAGLPGRCGVSIPYKISPSTDCSRV 118
           K+ AST  DR+ AC CL++AA  + PG+N   AAGLP  C V+IPYKIS ST+C+ V
Sbjct: 64  KNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTV 117

The following BLAST results are available for this feature:

BLAST of CcUC10G207900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935125.1	6.7e-38	71.55	non-specific lipid-transfer protein 1-like [Cucurbita moschata]	[more]
XP_038902996.1	8.8e-38	70.34	non-specific lipid-transfer protein 1-like [Benincasa hispida]	[more]
XP_023528122.1	1.1e-37	70.69	non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022982607.1	1.3e-36	68.97	non-specific lipid-transfer protein 1-like [Cucurbita maxima]	[more]
KAG7017187.1	1.4e-35	67.24	hypothetical protein SDJN02_19049 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CcUC10G207900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43194	3.8e-28	54.10	Non-specific lipid-transfer protein 2 OS=Sorghum bicolor OX=4558 GN=LTP2 PE=3 SV...	[more]
P85105	4.2e-27	60.87	Non-specific lipid-transfer protein P5 OS=Vitis sp. OX=3604 PE=1 SV=1	[more]
Q42762	5.5e-27	58.41	Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 PE=3 SV=1	[more]
P19656	5.5e-27	54.21	Non-specific lipid-transfer protein OS=Zea mays OX=4577 PE=1 SV=1	[more]
Q43129	9.4e-27	55.46	Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 PE=2 SV=1	[more]

BLAST of CcUC10G207900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9Q5	3.2e-38	71.55	Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC11144208...	[more]
A0A6J1IX25	6.1e-37	68.97	Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 ...	[more]
A0A5D3DMS3	1.4e-33	68.38	Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3B5F4	1.4e-33	68.38	Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103486230 PE=3...	[more]
A0A7N0ZQW0	4.3e-30	65.14	Non-specific lipid-transfer protein OS=Kalanchoe fedtschenkoi OX=63787 PE=3 SV=1	[more]

BLAST of CcUC10G207900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59320.1	5.0e-23	48.57	lipid transfer protein 3	[more]
AT5G59310.1	1.9e-22	50.96	lipid transfer protein 4	[more]
AT2G38540.1	5.1e-20	47.27	lipid transfer protein 1	[more]
AT3G51590.1	3.1e-17	43.40	lipid transfer protein 12	[more]
AT2G38530.1	4.1e-17	42.74	lipid transfer protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 28..44 score: 48.6 coord: 70..85 score: 56.35 coord: 49..63 score: 46.97 coord: 105..116 score: 62.82 coord: 87..104 score: 55.81
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 2..115
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PROSITE	PS00597	PLANT_LTP	coord: 96..117
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 29..114 e-value: 8.4E-12 score: 55.2
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 29..114 e-value: 1.5E-10 score: 41.4
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 26..118 e-value: 2.3E-31 score: 110.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 27..117
None	No IPR available	PANTHER	PTHR33076:SF76	NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED	coord: 2..115
None	No IPR available	CDD	cd01960	nsLTP1	coord: 27..115 e-value: 8.80317E-40 score: 125.925

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G207900.1	CcUC10G207900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0090378	seed trichome elongation
molecular_function	GO:0008289	lipid binding