CcUC10G206260 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G206260
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Histone H2B
Location	CicolChr10: 33328582 .. 33329001 (+)
RNA-Seq Expression	CcUC10G206260
Synteny	CcUC10G206260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCAACTAAAGCCGAAAAGAAGCCCGCAGAGAAGAAGCCGGCCGAGAAAACCCCTTCCTCGGCGGAGAAGAAGCCTAAGGCCGAGAAGAAGATCGCCAAAGACGGTGGCGACAAGAAGAAGAAGAAGATCAAGAAGAGCACCGAGACTTACAAGATCTACATCTTCAAGGTTTTAAAGCAGGTTCATCCTGACATTGGAATCTCCAGCAAGGCAATGGGCATTATGAACAGTTTCATCAACGATATCTTCGAGAAACTTGCTCAAGAGGCTTCGAAATTGGCGAGATATAACAAGAAACCTACGATCACCTCACGGGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGTGAGTTAGCGAAACACGCTGTATCTGAAGGAACTAAGGCGGTAACCAAATTTACAAGCTCTTAG

mRNA sequence

ATGGCGCCAACTAAAGCCGAAAAGAAGCCCGCAGAGAAGAAGCCGGCCGAGAAAACCCCTTCCTCGGCGGAGAAGAAGCCTAAGGCCGAGAAGAAGATCGCCAAAGACGGTGGCGACAAGAAGAAGAAGAAGATCAAGAAGAGCACCGAGACTTACAAGATCTACATCTTCAAGGTTTTAAAGCAGGTTCATCCTGACATTGGAATCTCCAGCAAGGCAATGGGCATTATGAACAGTTTCATCAACGATATCTTCGAGAAACTTGCTCAAGAGGCTTCGAAATTGGCGAGATATAACAAGAAACCTACGATCACCTCACGGGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGTGAGTTAGCGAAACACGCTGTATCTGAAGGAACTAAGGCGGTAACCAAATTTACAAGCTCTTAG

Coding sequence (CDS)

ATGGCGCCAACTAAAGCCGAAAAGAAGCCCGCAGAGAAGAAGCCGGCCGAGAAAACCCCTTCCTCGGCGGAGAAGAAGCCTAAGGCCGAGAAGAAGATCGCCAAAGACGGTGGCGACAAGAAGAAGAAGAAGATCAAGAAGAGCACCGAGACTTACAAGATCTACATCTTCAAGGTTTTAAAGCAGGTTCATCCTGACATTGGAATCTCCAGCAAGGCAATGGGCATTATGAACAGTTTCATCAACGATATCTTCGAGAAACTTGCTCAAGAGGCTTCGAAATTGGCGAGATATAACAAGAAACCTACGATCACCTCACGGGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGTGAGTTAGCGAAACACGCTGTATCTGAAGGAACTAAGGCGGTAACCAAATTTACAAGCTCTTAG

Protein sequence

MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Homology

[Close]

BLAST of CcUC10G206260 vs. NCBI nr
Match: XP_038903506.1 (probable histone H2B.3 [Benincasa hispida])

HSP 1 Score: 249.2 bits (635), Expect = 2.1e-62
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEK PSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKAPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of CcUC10G206260 vs. NCBI nr
Match: XP_008442575.1 (PREDICTED: probable histone H2B.3 [Cucumis melo] >KAA0044072.1 histone H2B-like [Cucumis melo var. makuwa] >TYK25065.1 histone H2B-like [Cucumis melo var. makuwa])

HSP 1 Score: 248.8 bits (634), Expect = 2.7e-62
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of CcUC10G206260 vs. NCBI nr
Match: XP_022958236.1 (probable histone H2B.3 [Cucurbita moschata] >XP_023005892.1 probable histone H2B.3 [Cucurbita maxima] >XP_023538865.1 probable histone H2B.3 [Cucurbita pepo subsp. pepo] >KAG6596423.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027965.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.5 bits (628), Expect = 1.3e-61
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+SAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPTSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of CcUC10G206260 vs. NCBI nr
Match: XP_022935032.1 (probable histone H2B.3 [Cucurbita moschata] >XP_022982546.1 probable histone H2B.3 [Cucurbita maxima] >XP_023527987.1 probable histone H2B.3 [Cucurbita pepo subsp. pepo] >KAG6580565.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017318.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 244.6 bits (623), Expect = 5.1e-61
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+S+EKK KAEKKIAKDGGDKKKKK+KKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of CcUC10G206260 vs. NCBI nr
Match: XP_022145639.1 (probable histone H2B.3 [Momordica charantia])

HSP 1 Score: 241.5 bits (615), Expect = 4.3e-60
Identity = 136/140 (97.14%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKP-AEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKV 60
           MAPTKAEKKPAEKKP AEK PSSAEKKPKAEKKI K+GGDKKKKKIKKSTETYKIYIFKV
Sbjct: 1   MAPTKAEKKPAEKKPAAEKAPSSAEKKPKAEKKITKEGGDKKKKKIKKSTETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 140

[Close]

BLAST of CcUC10G206260 vs. ExPASy Swiss-Prot
Match: Q1SU99 (Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 222.2 bits (565), Expect = 3.5e-57
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDG-GDKKKKKIKKSTETYKIYIFKV 60
           M PTKAEKKPAEKKPAEK P  AEKKPKAEKKI+K+G  DKKKK+ KKS ETYKIYIFKV
Sbjct: 1   MPPTKAEKKPAEKKPAEKAP--AEKKPKAEKKISKEGSSDKKKKRTKKSVETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIG+SSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of CcUC10G206260 vs. ExPASy Swiss-Prot
Match: Q9ZUS0 (Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 212.6 bits (540), Expect = 2.8e-54
Identity = 123/140 (87.86%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKD--GGDKKKKKIKKSTETYKIYIFK 60
           MAP  AEKKPAEKKPA K P  AEK PKAEKKI+KD  G +KKKKK KKS ETYKIYIFK
Sbjct: 1   MAPKAAEKKPAEKKPAGKAP--AEKLPKAEKKISKDAGGSEKKKKKSKKSVETYKIYIFK 60

Query: 61  VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 120
           VLKQVHPD+GIS KAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  VLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP 120

Query: 121 GELAKHAVSEGTKAVTKFTS 139
           GELAKHAVSEGTKAVTKFTS
Sbjct: 121 GELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of CcUC10G206260 vs. ExPASy Swiss-Prot
Match: Q9LFF6 (Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3)

HSP 1 Score: 211.5 bits (537), Expect = 6.3e-54
Identity = 122/140 (87.14%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGG-DKKKKKIKKSTETYKIYIFKV 60
           MAP  AEKKPA KKPAEK P  AEK PKAEKKI K+GG +KKKKK KK+ ETYKIYIFKV
Sbjct: 1   MAPKAAEKKPAGKKPAEKAP--AEKLPKAEKKITKEGGSEKKKKKSKKNIETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           EL+KHAVSEGTKAVTKFTSS
Sbjct: 121 ELSKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of CcUC10G206260 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3)

HSP 1 Score: 211.1 bits (536), Expect = 8.2e-54
Identity = 125/148 (84.46%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEK-----TPSSAEKKPKAEKKIAKDG----GDKKKKKIKKSTET 60
           MAP KAEKKPAEKKPAE+       + AEKKPKA KK+ K+G    GDKKKK++KKS ET
Sbjct: 1   MAP-KAEKKPAEKKPAEEKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147

[Close]

BLAST of CcUC10G206260 vs. ExPASy Swiss-Prot
Match: Q9SI96 (Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-53
Identity = 126/152 (82.89%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSS---------AEKKPKAEKKIAKD----GGDKKKKKIKK 60
           MAP KA KKPAEKKPAEK P+          AEKKPKA KK+ K+    G +KKKK++KK
Sbjct: 1   MAP-KAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKK 60

Query: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120
           STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR
Sbjct: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

[Close]

BLAST of CcUC10G206260 vs. ExPASy TrEMBL
Match: A0A5D3DN75 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001870 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of CcUC10G206260 vs. ExPASy TrEMBL
Match: A0A1S3B6N1 (Histone H2B OS=Cucumis melo OX=3656 GN=LOC103486408 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of CcUC10G206260 vs. ExPASy TrEMBL
Match: A0A6J1KUE6 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111498762 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.5e-62
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+SAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPTSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of CcUC10G206260 vs. ExPASy TrEMBL
Match: A0A6J1H1K6 (Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111459261 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.5e-62
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+SAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPTSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of CcUC10G206260 vs. ExPASy TrEMBL
Match: A0A6J1IZM1 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111481391 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.5e-61
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+S+EKK KAEKKIAKDGGDKKKKK+KKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of CcUC10G206260 vs. TAIR 10
Match: AT2G37470.1 (Histone superfamily protein )

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-55
Identity = 123/140 (87.86%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKD--GGDKKKKKIKKSTETYKIYIFK 60
           MAP  AEKKPAEKKPA K P  AEK PKAEKKI+KD  G +KKKKK KKS ETYKIYIFK
Sbjct: 1   MAPKAAEKKPAEKKPAGKAP--AEKLPKAEKKISKDAGGSEKKKKKSKKSVETYKIYIFK 60

Query: 61  VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 120
           VLKQVHPD+GIS KAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  VLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP 120

Query: 121 GELAKHAVSEGTKAVTKFTS 139
           GELAKHAVSEGTKAVTKFTS
Sbjct: 121 GELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of CcUC10G206260 vs. TAIR 10
Match: AT3G53650.1 (Histone superfamily protein )

HSP 1 Score: 211.5 bits (537), Expect = 4.4e-55
Identity = 122/140 (87.14%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGG-DKKKKKIKKSTETYKIYIFKV 60
           MAP  AEKKPA KKPAEK P  AEK PKAEKKI K+GG +KKKKK KK+ ETYKIYIFKV
Sbjct: 1   MAPKAAEKKPAGKKPAEKAP--AEKLPKAEKKITKEGGSEKKKKKSKKNIETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           EL+KHAVSEGTKAVTKFTSS
Sbjct: 121 ELSKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of CcUC10G206260 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 210.3 bits (534), Expect = 9.9e-55
Identity = 126/152 (82.89%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSS---------AEKKPKAEKKIAKD----GGDKKKKKIKK 60
           MAP KA KKPAEKKPAEK P+          AEKKPKA KK+ K+    G +KKKK++KK
Sbjct: 1   MAP-KAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKK 60

Query: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120
           STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR
Sbjct: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

[Close]

BLAST of CcUC10G206260 vs. TAIR 10
Match: AT5G22880.1 (histone B2 )

HSP 1 Score: 208.8 bits (530), Expect = 2.9e-54
Identity = 121/143 (84.62%), Postives = 129/143 (90.21%), Query Frame = 0


Query: 5   KAEKKPAEKKPAEKTP-----SSAEKKPKAEKKIAKD---GGDKKKKKIKKSTETYKIYI 64
           KA+KKPAEKKPAEKTP     ++AEKKPKA KK+ K+    GDKKKK+ KK+ ETYKIYI
Sbjct: 3   KADKKPAEKKPAEKTPAAEPAAAAEKKPKAGKKLPKEPAGAGDKKKKRSKKNVETYKIYI 62

Query: 65  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLV 124
           FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+SKLARYNKKPTITSREIQTAVRLV
Sbjct: 63  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLV 122

Query: 125 LPGELAKHAVSEGTKAVTKFTSS 140
           LPGELAKHAVSEGTKAVTKFTSS
Sbjct: 123 LPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of CcUC10G206260 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 208.8 bits (530), Expect = 2.9e-54
Identity = 126/151 (83.44%), Postives = 130/151 (86.09%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTP---------SSAEKKPKAEKKIAKD---GGDKKKKKIKKS 60
           MAP KAEKKPAEKKPA + P         + AEKKPKA KK+ K+   GGDKKKK  KKS
Sbjct: 1   MAP-KAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKS 60

Query: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

The following BLAST results are available for this feature:

BLAST of CcUC10G206260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903506.1	2.1e-62	99.28	probable histone H2B.3 [Benincasa hispida]	[more]
XP_008442575.1	2.7e-62	99.28	PREDICTED: probable histone H2B.3 [Cucumis melo] >KAA0044072.1 histone H2B-like ...	[more]
XP_022958236.1	1.3e-61	97.84	probable histone H2B.3 [Cucurbita moschata] >XP_023005892.1 probable histone H2B...	[more]
XP_022935032.1	5.1e-61	97.12	probable histone H2B.3 [Cucurbita moschata] >XP_022982546.1 probable histone H2B...	[more]
XP_022145639.1	4.3e-60	97.14	probable histone H2B.3 [Momordica charantia]	[more]

BLAST of CcUC10G206260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1SU99	3.5e-57	90.00	Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3	[more]
Q9ZUS0	2.8e-54	87.86	Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3	[more]
Q9LFF6	6.3e-54	87.14	Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3	[more]
O22582	8.2e-54	84.46	Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3	[more]
Q9SI96	1.4e-53	82.89	Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3	[more]

BLAST of CcUC10G206260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DN75	1.3e-62	99.28	Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001870 P...	[more]
A0A1S3B6N1	1.3e-62	99.28	Histone H2B OS=Cucumis melo OX=3656 GN=LOC103486408 PE=3 SV=1	[more]
A0A6J1KUE6	6.5e-62	97.84	Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111498762 PE=3 SV=1	[more]
A0A6J1H1K6	6.5e-62	97.84	Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111459261 PE=3 SV=1	[more]
A0A6J1IZM1	2.5e-61	97.12	Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111481391 PE=3 SV=1	[more]

BLAST of CcUC10G206260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37470.1	2.0e-55	87.86	Histone superfamily protein	[more]
AT3G53650.1	4.4e-55	87.14	Histone superfamily protein	[more]
AT2G28720.1	9.9e-55	82.89	Histone superfamily protein	[more]
AT5G22880.1	2.9e-54	84.62	histone B2	[more]
AT5G59910.1	2.9e-54	83.44	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 123..136 score: 92.65 coord: 93..110 score: 76.51 coord: 71..91 score: 75.74 coord: 110..123 score: 92.45 coord: 52..70 score: 80.55
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 42..138 e-value: 1.3E-72 score: 257.3
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 5..139
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 107..129
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 5..115 e-value: 1.8E-23 score: 83.3
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..139 e-value: 2.4E-60 score: 204.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 24..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	PANTHER	PTHR23428:SF273	HISTONE H2B.4	coord: 5..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G206260.1	CcUC10G206260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity