CcUC10G205770 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G205770
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	DNA-binding protein S1FA
Location	CicolChr10: 32933706 .. 32934340 (+)
RNA-Seq Expression	CcUC10G205770
Synteny	CcUC10G205770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCCTGCAGGCAAATTGTCATCTCAAATCGGGGAACTTCGAGCGACTAGGTTGGAAAATTGTAATTAAACTGCTTTGCAATAACTGCAACCATCATTAAAGTTTCGAGGATATTTGAAATTATTATTGATTTTGTAGAGAACTAATTTAAGATCGAAAATGGGCTATCTAGGTTTGAGAAATATGATGAAGAGAAGCTATTTTTGTTTATGGCCTAGTGTTAAATCCTGTTATAGGTGAATCTCGATTAGTAATTGAATTCCCTCGTGAGAACCATGAATAATCACAGATCATTTATTAGTCATTACTTATGAAAAATATGAAATGGTGGGTGGTTTTTGTTCCTTGGAAACATCAAATTTGATGTTGTGGTTCATTGTGATGGTTTATTAATTGTTTTTTCAACAAGTGAACAGGGAAATGTGATCAATGATGTTGAAGCAAAAGGATTCAATCCAGCGCTAATAGTACTTCTTCTTGTTAGTGGGTTGCTTCTGATTTTCCTCGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTATCTAAAAAGAAGATGAAGAGAGAAAGACTGAAGCAAGGAGTGTCTGCACCTGGAGAGTAA

mRNA sequence

ATGAACCCTGCAGGCAAATTGTCATCTCAAATCGGGGAACTTCGAGCGACTAGTGAACAGGGAAATGTGATCAATGATGTTGAAGCAAAAGGATTCAATCCAGCGCTAATAGTACTTCTTCTTGTTAGTGGGTTGCTTCTGATTTTCCTCGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTATCTAAAAAGAAGATGAAGAGAGAAAGACTGAAGCAAGGAGTGTCTGCACCTGGAGAGTAA

Coding sequence (CDS)

ATGAACCCTGCAGGCAAATTGTCATCTCAAATCGGGGAACTTCGAGCGACTAGTGAACAGGGAAATGTGATCAATGATGTTGAAGCAAAAGGATTCAATCCAGCGCTAATAGTACTTCTTCTTGTTAGTGGGTTGCTTCTGATTTTCCTCGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTATCTAAAAAGAAGATGAAGAGAGAAAGACTGAAGCAAGGAGTGTCTGCACCTGGAGAGTAA

Protein sequence

MNPAGKLSSQIGELRATSEQGNVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGVSAPGE

Homology

[Close]

BLAST of CcUC10G205770 vs. NCBI nr
Match: XP_038905724.1 (DNA-binding protein S1FA-like [Benincasa hispida])

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-27
Identity = 70/78 (89.74%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 14 LRATSEQGNVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 73
          + + + +GNVINDVEAKGFNPALIVLLLV GLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 74 KKKMKRERLKQGVSAPGE 92
          KKKMKRERLKQGVSAPGE
Sbjct: 61 KKKMKRERLKQGVSAPGE 78

[Close]

BLAST of CcUC10G205770 vs. NCBI nr
Match: KAE8651038.1 (hypothetical protein Csa_000825 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27
Identity = 69/78 (88.46%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 14  LRATSEQGNVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 73
           + + + +GNVIND+EAKGFNPALIVLLLV GLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 819 MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 878

Query: 74  KKKMKRERLKQGVSAPGE 92
           KKKMKRERLKQGVSAPGE
Sbjct: 879 KKKMKRERLKQGVSAPGE 896

[Close]

BLAST of CcUC10G205770 vs. NCBI nr
Match: XP_004137812.1 (DNA-binding protein S1FA [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27
Identity = 69/78 (88.46%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 14 LRATSEQGNVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 73
          + + + +GNVIND+EAKGFNPALIVLLLV GLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 74 KKKMKRERLKQGVSAPGE 92
          KKKMKRERLKQGVSAPGE
Sbjct: 61 KKKMKRERLKQGVSAPGE 78

[Close]

BLAST of CcUC10G205770 vs. NCBI nr
Match: XP_008442666.1 (PREDICTED: DNA-binding protein S1FA-like [Cucumis melo])

HSP 1 Score: 131.0 bits (328), Expect = 5.4e-27
Identity = 69/78 (88.46%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 14 LRATSEQGNVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 73
          + + + +GNVINDVEAKGFNPALIVLLLV GLLL FLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDVEAKGFNPALIVLLLVGGLLLTFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 74 KKKMKRERLKQGVSAPGE 92
          KKKMKRERLKQGVSAPGE
Sbjct: 61 KKKMKRERLKQGVSAPGE 78

[Close]

BLAST of CcUC10G205770 vs. NCBI nr
Match: XP_022145490.1 (DNA-binding protein S1FA-like [Momordica charantia])

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-26
Identity = 67/78 (85.90%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 14 LRATSEQGNVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 73
          + +++ +GNVINDVEAKGFNP LIVLLLV GLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASSNAKGNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 74 KKKMKRERLKQGVSAPGE 92
          KKKM++ERLKQGVSAPGE
Sbjct: 61 KKKMRKERLKQGVSAPGE 78

[Close]

BLAST of CcUC10G205770 vs. ExPASy Swiss-Prot
Match: P42552 (DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.3e-23
Identity = 54/68 (79.41%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 24 INDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLK 83
          +N+VEAKG NP LIVLL++ GLLL FLVGN+ LY YAQKNLPPKKKKP+SKKKMKRERLK
Sbjct: 3  VNEVEAKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPKKKKPISKKKMKRERLK 62

Query: 84 QGVSAPGE 92
          QGV+ PGE
Sbjct: 63 QGVAPPGE 70

[Close]

BLAST of CcUC10G205770 vs. ExPASy Swiss-Prot
Match: Q7XLX6 (DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA2 PE=3 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 6.6e-20
Identity = 50/70 (71.43%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 22 NVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRER 81
          NV+ +   KG NP +IVL++V+  LL+F VGNYALY+YAQK LPP+KKKPVSKKKMKRE+
Sbjct: 11 NVVIEEVNKGLNPGMIVLIVVATFLLLFFVGNYALYVYAQKTLPPRKKKPVSKKKMKREK 70

Query: 82 LKQGVSAPGE 92
          LKQGVSAPGE
Sbjct: 71 LKQGVSAPGE 80

[Close]

BLAST of CcUC10G205770 vs. ExPASy Swiss-Prot
Match: Q93VI0 (DNA-binding protein S1FA3 OS=Arabidopsis thaliana OX=3702 GN=S1FA3 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.6e-20
Identity = 48/65 (73.85%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 27 VEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGV 86
          +E+KG NP LIVLL++ GLLL FLVGN+ LY YAQKNLPP+KKKPVSKKKMK+E++KQGV
Sbjct: 9  IESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGV 68

Query: 87 SAPGE 92
            PGE
Sbjct: 69 QVPGE 73

[Close]

BLAST of CcUC10G205770 vs. ExPASy Swiss-Prot
Match: P42551 (DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 8.6e-20
Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 0


Query: 28 EAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGVS 87
          EAKG NP LIVLL+V G LL+FL+ NY LY+YAQKNLPP+KKKPVSKKK+KRE+LKQGV 
Sbjct: 13 EAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGVP 72

Query: 88 APGE 92
           PGE
Sbjct: 73 VPGE 76

[Close]

BLAST of CcUC10G205770 vs. ExPASy Swiss-Prot
Match: P42553 (DNA-binding protein S1FA1 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA1 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 8.6e-20
Identity = 50/73 (68.49%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 19 EQGNVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMK 78
          +  N+I +   KG NP  IVLL+V+ LL++F VGNYALY+YAQK LPP+KKKPVSKKK+K
Sbjct: 4  QSNNMIIEEVNKGLNPGTIVLLVVATLLILFFVGNYALYMYAQKTLPPRKKKPVSKKKLK 63

Query: 79 RERLKQGVSAPGE 92
          RE+LKQGVSAPGE
Sbjct: 64 REKLKQGVSAPGE 76

[Close]

BLAST of CcUC10G205770 vs. ExPASy TrEMBL
Match: A0A0A0LAW3 (DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_3G736950 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.9e-28
Identity = 69/78 (88.46%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 14 LRATSEQGNVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 73
          + + + +GNVIND+EAKGFNPALIVLLLV GLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 74 KKKMKRERLKQGVSAPGE 92
          KKKMKRERLKQGVSAPGE
Sbjct: 61 KKKMKRERLKQGVSAPGE 78

[Close]

BLAST of CcUC10G205770 vs. ExPASy TrEMBL
Match: A0A1S3B680 (DNA-binding protein S1FA-like OS=Cucumis melo OX=3656 GN=LOC103486467 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.6e-27
Identity = 69/78 (88.46%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 14 LRATSEQGNVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 73
          + + + +GNVINDVEAKGFNPALIVLLLV GLLL FLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDVEAKGFNPALIVLLLVGGLLLTFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 74 KKKMKRERLKQGVSAPGE 92
          KKKMKRERLKQGVSAPGE
Sbjct: 61 KKKMKRERLKQGVSAPGE 78

[Close]

BLAST of CcUC10G205770 vs. ExPASy TrEMBL
Match: A0A6J1CUM0 (DNA-binding protein S1FA-like OS=Momordica charantia OX=3673 GN=LOC111014929 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.8e-27
Identity = 67/78 (85.90%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 14 LRATSEQGNVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 73
          + +++ +GNVINDVEAKGFNP LIVLLLV GLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASSNAKGNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 74 KKKMKRERLKQGVSAPGE 92
          KKKM++ERLKQGVSAPGE
Sbjct: 61 KKKMRKERLKQGVSAPGE 78

[Close]

BLAST of CcUC10G205770 vs. ExPASy TrEMBL
Match: A0A6J1IZV9 (DNA-binding protein S1FA-like OS=Cucurbita maxima OX=3661 GN=LOC111482175 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 7.6e-27
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 14 LRATSEQGNVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 73
          + + + +GNVINDVEAKG NPALIVLLLV GLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 74 KKKMKRERLKQGVSAPGE 92
          KKKMKR+RLKQGVSAPGE
Sbjct: 61 KKKMKRDRLKQGVSAPGE 78

[Close]

BLAST of CcUC10G205770 vs. ExPASy TrEMBL
Match: A0A6J1F6J1 (DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111441328 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 7.6e-27
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 14 LRATSEQGNVINDVEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 73
          + + + +GNVINDVEAKG NPALIVLLLV GLLLIFLVGNYALYLYAQKNLPPKKKKPVS
Sbjct: 1  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVS 60

Query: 74 KKKMKRERLKQGVSAPGE 92
          KKKMKR+RLKQGVSAPGE
Sbjct: 61 KKKMKRDRLKQGVSAPGE 78

[Close]

BLAST of CcUC10G205770 vs. TAIR 10
Match: AT3G09735.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 97.8 bits (242), Expect = 4.7e-21
Identity = 48/65 (73.85%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 27 VEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGV 86
          +E+KG NP LIVLL++ GLLL FLVGN+ LY YAQKNLPP+KKKPVSKKKMK+E++KQGV
Sbjct: 9  IESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGV 68

Query: 87 SAPGE 92
            PGE
Sbjct: 69 QVPGE 73

[Close]

BLAST of CcUC10G205770 vs. TAIR 10
Match: AT3G53370.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 97.4 bits (241), Expect = 6.1e-21
Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 0


Query: 28 EAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGVS 87
          EAKG NP LIVLL+V G LL+FL+ NY LY+YAQKNLPP+KKKPVSKKK+KRE+LKQGV 
Sbjct: 13 EAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGVP 72

Query: 88 APGE 92
           PGE
Sbjct: 73 VPGE 76

[Close]

BLAST of CcUC10G205770 vs. TAIR 10
Match: AT2G37120.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 97.1 bits (240), Expect = 8.0e-21
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 27 VEAKGFNPALIVLLLVSGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGV 86
          VEAKG NP LIVLL++ GLL+ FL+ NY +Y+YAQKNLPP+KKKP+SKKK+KRE+LKQGV
Sbjct: 12 VEAKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKLKREKLKQGV 71

Query: 87 SAPGE 92
            PGE
Sbjct: 72 PVPGE 76

[Close]

BLAST of CcUC10G205770 vs. TAIR 10
Match: AT3G53370.2 (S1FA-like DNA-binding protein )

HSP 1 Score: 53.9 bits (128), Expect = 7.8e-08
Identity = 26/33 (78.79%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 59 YAQKNLPPKKKKPVSKKKMKRERLKQGVSAPGE 92
          +A KNLPP+KKKPVSKKK+KRE+LKQGV  PGE
Sbjct: 6  FAGKNLPPRKKKPVSKKKLKREKLKQGVPVPGE 38

The following BLAST results are available for this feature:

BLAST of CcUC10G205770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905724.1	1.4e-27	89.74	DNA-binding protein S1FA-like [Benincasa hispida]	[more]
KAE8651038.1	1.8e-27	88.46	hypothetical protein Csa_000825 [Cucumis sativus]	[more]
XP_004137812.1	1.8e-27	88.46	DNA-binding protein S1FA [Cucumis sativus]	[more]
XP_008442666.1	5.4e-27	88.46	PREDICTED: DNA-binding protein S1FA-like [Cucumis melo]	[more]
XP_022145490.1	1.2e-26	85.90	DNA-binding protein S1FA-like [Momordica charantia]	[more]

BLAST of CcUC10G205770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42552	8.3e-23	79.41	DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1	[more]
Q7XLX6	6.6e-20	71.43	DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA2 PE=3...	[more]
Q93VI0	6.6e-20	73.85	DNA-binding protein S1FA3 OS=Arabidopsis thaliana OX=3702 GN=S1FA3 PE=3 SV=1	[more]
P42551	8.6e-20	76.56	DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2	[more]
P42553	8.6e-20	68.49	DNA-binding protein S1FA1 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA1 PE=3...	[more]

BLAST of CcUC10G205770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAW3	8.9e-28	88.46	DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_3G736950 PE=3 SV=1	[more]
A0A1S3B680	2.6e-27	88.46	DNA-binding protein S1FA-like OS=Cucumis melo OX=3656 GN=LOC103486467 PE=3 SV=1	[more]
A0A6J1CUM0	5.8e-27	85.90	DNA-binding protein S1FA-like OS=Momordica charantia OX=3673 GN=LOC111014929 PE=...	[more]
A0A6J1IZV9	7.6e-27	87.18	DNA-binding protein S1FA-like OS=Cucurbita maxima OX=3661 GN=LOC111482175 PE=3 S...	[more]
A0A6J1F6J1	7.6e-27	87.18	DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111441328 PE=3...	[more]

BLAST of CcUC10G205770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09735.1	4.7e-21	73.85	S1FA-like DNA-binding protein	[more]
AT3G53370.1	6.1e-21	76.56	S1FA-like DNA-binding protein	[more]
AT2G37120.1	8.0e-21	72.31	S1FA-like DNA-binding protein	[more]
AT3G53370.2	7.8e-08	78.79	S1FA-like DNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006779	DNA binding protein S1FA	PFAM	PF04689	S1FA	coord: 27..91 e-value: 7.4E-39 score: 131.7
IPR006779	DNA binding protein S1FA	PANTHER	PTHR35298	DNA-BINDING PROTEIN S1FA2	coord: 18..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..91
None	No IPR available	PANTHER	PTHR35298:SF9	DNA-BINDING PROTEIN S1FA1-RELATED	coord: 18..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G205770.1	CcUC10G205770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding