CcUC10G202980 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC10G202980
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr10: 30202360 .. 30204166 (+)
RNA-Seq ExpressionCcUC10G202980
SyntenyCcUC10G202980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTGGAAGGCAAAAGGGAGTTGTCCCGGGCTTTGTTTGCAGTTGCAGGTGGAATTGGAATCACAATGTGCTGCACTCTATGCCTCTGTTAGTACATCCATTGCAGTTTACTCCTTAAATTCCCCATTCACCTGTGGAAGCACAGTTAGCAAGCTCAACCCAGATTTTGGTAATTCTCATAACTCTTCAGGTATCAACGATTAAGCCAGTCCATCTAACATCAAAGAGTATTTCCATCTCCAAAAACAGGATACACACACAATATTTGGAAATTGTGTCTGCTTTACTCTTCTGAAGATACTTCAAATGTTTAAATCTCTTTAATCTTTGATCACATAACAAGTAATTGGGTTTGCAACTTCGAACATCTATTAAGATAGCCGCCCTGGATTTGTTTAGGGATCAATTAGGCGTTAGAGAAAATGAGTTCAAGCTAAACACTGTAAAAGAAAGTAAAAGAAAAATTCTTCAGTTTTCAGTAGCAAGAAACGGCCCCATTTGCTAATAATTTTTTTAAAAAATTAAGTTTATAAACATTACTTCCACCGTACTCATGTTTTCAAAAGCCAAACTAAAATTTTGAAAATTTAAAAAGTAATTCTCAAATAGTGGTTTGTTTTTAGAATATGACGAGGAGTGTAAGTGTTTCTTTAAAAAGATTTAAATTTTAAAAAGAGAACTAAAAACCAAACCCTTAGTAAAGGGGCATTAACATTTTGTAGAAAGTGTTCTTATAACTCAAAGGAACTCCACTAGTGAAAATAATGTACAGCCCATCACAGACACACAGGAAAAGTTCACCAACTAACGGAGACAGAGACACACGAACAGATCTGGGAGACCAGAACAGTCGTCGACGGAAGTGACGGACCTCGAACGGCAGGCCGCGAGTGGGTCAGATCTGAGTGGATGTGACGAATCTGGAACGGCAGGTCGGCACGAACGGAAGTGACGGATATTAAACTTGGATCGGGGCTGATCAGAGCAGATCGGCACGAACGGACCAGATCTGGGCTGCAGTCGTGCGGATTGGAGCAGATATGTTCGTTGTTGGAGGCGGTGGAGCTCCTTCACAAGCAGATCTGGGCGACGGTGACAGATCTCGAGTGATAGTGCCGACCGAACAGATCTGGGCAGGCAGAACGACGCGTGCGAACGACAGCGGATCTGGTGCCGTAGCGGGTTTGGAGCAGCGGATCTGGGCGAGTAGATCTATGGTGCGGACGAACAGATCAAACGGAGAACAAATCAGAGCGGATCGACGGAGAAAAGTGAGTGGCGGCAGACCGGATCGGAGACGGAACAGGGCGGCGGCGGCGGCAACTTGGAACCCTAAAAATGGGCTCTCAGCTTGGATATTCTATTGAATAATTGCAGACTTTACACATAGGCTTACTAGTCTACATACACACATACAAAATACAAATAAGAAAAATACTAAATAAGGAAAATATTCTAATTGGTTAAATTATACACAACATATATGATAATAATGTCAAAAATGAAAAATCATCCACTTGTGCAGAAAAGCATTACATTAACAGCGAGAAAGAAACGACAAAAACTCCTCGATTGATCGAAACTCAAAGGTATGGTAACATTTCCAAAGATTTGAACAACACCCAAATAGAGAGCTCGGCTAAACAATTTGTCGAATTGATAAATGATGAGGAAACGAACCTAAGGTTTTCAACGAGGAGCCGACGAACTGCAGAATTTGGCCAGCCTTCCCCGACTAAGATTATTGATTAAGTGAGTTGCTATTTCGTAAATTACAGATAAGAGAGTGTTAGGAACTTGCTAA

mRNA sequence

ATGGCCTGGAAGGCAAAAGGGAGTTGTCCCGGGCTTTGTTTGCAGTTGCAGGTGGAATTGGAATCACAATGTGCTGCACTCTATGCCTCTGTTAGTACATCCATTGCAGTTTACTCCTTAAATTCCCCATTCACCTGTGGAAGCACAGTTAGCAAGCTCAACCCAGATTTTGGTAATTCTCATAACTCTTCAGCCCATCACAGACACACAGGAAAAGTTCACCAACTAACGGAGACAGAGACACACGAACAGATCTGGGAGACCAGAACAGTCGTCGACGGAAGTGACGGACCTCGAACGGCAGGCCGCGAGTGGAGCAGATCGGCACGAACGGACCAGATCTGGGCTGCAGTCGTGCGGATTGGAGCAGATATGTTCGTTGTTGGAGGCGGTGGAGCTCCTTCACAAGCAGATCTGGGCGACGGTGACAGATCTCGAGTGATAGTGCCGACCGAACAGATCTGGGCAGGCAGAACGACGCGTGCGAACGACAGCGGATCTGGTGCCGTAGCGGATAAGAGAGTGTTAGGAACTTGCTAA

Coding sequence (CDS)

ATGGCCTGGAAGGCAAAAGGGAGTTGTCCCGGGCTTTGTTTGCAGTTGCAGGTGGAATTGGAATCACAATGTGCTGCACTCTATGCCTCTGTTAGTACATCCATTGCAGTTTACTCCTTAAATTCCCCATTCACCTGTGGAAGCACAGTTAGCAAGCTCAACCCAGATTTTGGTAATTCTCATAACTCTTCAGCCCATCACAGACACACAGGAAAAGTTCACCAACTAACGGAGACAGAGACACACGAACAGATCTGGGAGACCAGAACAGTCGTCGACGGAAGTGACGGACCTCGAACGGCAGGCCGCGAGTGGAGCAGATCGGCACGAACGGACCAGATCTGGGCTGCAGTCGTGCGGATTGGAGCAGATATGTTCGTTGTTGGAGGCGGTGGAGCTCCTTCACAAGCAGATCTGGGCGACGGTGACAGATCTCGAGTGATAGTGCCGACCGAACAGATCTGGGCAGGCAGAACGACGCGTGCGAACGACAGCGGATCTGGTGCCGTAGCGGATAAGAGAGTGTTAGGAACTTGCTAA

Protein sequence

MAWKAKGSCPGLCLQLQVELESQCAALYASVSTSIAVYSLNSPFTCGSTVSKLNPDFGNSHNSSAHHRHTGKVHQLTETETHEQIWETRTVVDGSDGPRTAGREWSRSARTDQIWAAVVRIGADMFVVGGGGAPSQADLGDGDRSRVIVPTEQIWAGRTTRANDSGSGAVADKRVLGTC
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC10G202980.1CcUC10G202980.1mRNA