CcUC10G201530 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC10G201530
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr10: 28709308 .. 28714860 (-)
RNA-Seq ExpressionCcUC10G201530
SyntenyCcUC10G201530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCATGTTACCGATATCCCGAAATATGCATGGTTTTATCTCCTTGGTTACACATACCATACTAGTAGAAATAGCGCAAGTGTCCATCGAATGGTATAAACACGAACACCTACAGAAGCTGTGAACGAGCATGTTAGATTACAACACAATCTACCTTACCTCCATGAATAAGAAAACAAAAATTGACAACAATAAAACTATTGGCATAACGCCATAACCAAGAGACTAGAGGTTCAAATCTACCCCACATCCCACATGTTGGTGAACTCAAAATTATAATATAAGTTGATACAAAATCTCCAAACATGCCTTAAATTTTACCTAATATTTTCCGAATCCCCAAATACTCCTTATTTTCATTGTCAGTCTAAGATCTGGCATCAAAAGCAGAAAAATTAAAAAGAAACAGCACTTCAAAGCACTATCAGGTCTATCAGGGAACATTTGCAATTAAGCACTTTTTCTCATAGCACTACGAACCTGTTTAAAAGATGTTTTCTATGTGAAACAAACATGTTTTAAGCACTTAAAAAGTCTATCCAAATATACACACCATAAGCTTATTCATGCTCCACACAGTGTTACACTTAATATCTGATTTTCTTGTGTTTTCATCTGCCTTACTTTCCATCAGAAACTGTAACAGTTGCAGCCTTGTGCCTCTGTGTAATCTATGTAAGTCAACCCCAAATGCATTATTAGAAATAAACAACACAAAACTTGTACTGCAAAACACAACCTGCACCAGCTTCTTTCCATAAGCTTACAGCTATTTACTTAGATTTTCTCAAAAACCTCCAATATTTCAACCACTCCGGCTTCTTCACCAAGCTCTCACTTCGAGCTCCACAGTGCACCTAATAATCAACTAAAAATAAAATCCTCTGGTTGAGCTAAATCTGAATCCGTCCCATCAAAAGTCAGTATATACCAACCATTAGTAATGGCTTTTCTAGAAGGCCTCAGGTACCATTGGAGCAAAATTAGTTCCAGGCAAACAGCGGTTGGATTTCAAGAACTCTCTCCCACAATTTCGCACATGCCTGACACAATAATCTCCTAACCCACACGACCATGACCATAACATCCTTACTCTAACCAAAACCAAATATACAATTCCCCCTATAGTCAATCACAATCATACTAACCACAGTTAAAATCAAAAGGAGAAGTCTGCCAACAAGTAAATGAGCAGCGAAATAATGTGAGAATGAGGGATGACACTATATACTCACAAGAAAATTGAGGTGGTAAGACTGAAGGGGGACTTCTTTCAAAATTTTCTGCATGTCCACTGCCTGTATTTGGAGACTGTACACTAGATAGAACTACACCTGACAGTGGACTTGAAGCAGAAATAGAATCAGAAACAGGTGCTGGCAGGCCTACTCGTAAGAATGGTGGCAATGGAGGACTGCTTCGAGAAGGAATAGGGCCTAAATGAGATTGTTTTCTGACTTTTCTTGAAGACCTCTTATATCCATATTGAAAAGCAGTCGGAGTAGCTTCATGGTTTCTTTTATTTGCAGTTGGACTTTCCACTGGAGATGAACCAGCTTCGGGAGCAGATGATACCCCATTCTTCAGTGCATGTTTGTGCTCCTCTGTTCCAGGACTAGGTGAGTATGCAGCATCCTGATTGTGGTGGTGGTGGTGATGGTGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGGTGGTGGTGAGAATGAGGCAGAGGCGCAGGTGAAGGTGACCGAGCACTGCCACCACCACCAAGAGAGTGGTTTAGGACTGATGAAAGACGCACCTGCTTGACCTTACCAAATACAGTGTTGTTCAGGCCAAGGTTTCCTGAATGAGAACTTGTGATGGTTTGAGCCAACTGTTTTAGCCTTTGTTTCAATGAGTTAGTCCCAATTGCCATCAGAACAGATGACTGGACAATAGTGGGGGGATGCATTGTTGAACCTCTTTTGTTCGATAGGCTAACATACAAATTCTGCATCGTATAAAACACTGTTAGGTAAATCTGCACAGTTAAAAACAATAAGCAACAGAATCTTCAACAGTCAAGAGAGTGAACATAGTTTCATCATCCACGTATCTACCCATAAAGCTTCTTTATGCATTTAACTCAAAGCCAATGCTTTGTGAAGTTTAAAGTTGCTTTCATCAGTAGCCCTCTCTGTCATGTATATAATGGGAAAAAAGATAGCAAGGAAGATTGCCGAACCTCATAAGGAGATAGATGTAATCCTGACCTCAACTGGCTGGTAAGATCATCAAAATTCACTTGAATTTGATAAATAGAATAATTTAATGTGAAATTGAAATAGATCTGTGCCGCCTGCAGAGGAAATGCACTCTGAGGAGGAATAATAGTTATTCCTCCAGGAAATTTCAACACCTCGAATAAGGATGTATTACCAAATAATGATGCATTCAATCTCAGAGGAGGTTCATTTATAACCAATGTTTCAAAGGTATCCTTGATTAAACTTTGAGATGTTGGGGGAATTTTCGAATACTTTGCATCAGAATCTACCGCAAAAACAATTTTTGTTACGTTTGGTCCACCTAATGATTGTAGTGAGAGGATAACCACCTGGTTAAAAGAGAGTATTTGATCAAACGACCAAAAATGTGACACATCAAGCCAGAGGAAACAAGAAACTGAACTGGATACCTTGACAAATGGTACGGGTATTTCTCCAAAAATGTTATCCTCAAGCTCAAAAATATGGTTTTCCATAAAAGGAACTGGCTTCCAAGCATGAAAACTTGCTACTATTTCATGATCTGGAAGTGTGATAAAATCATAAAATTTCAGTGAATAGAATATATTACATGTGCAGTAACTTACATACTACGAGAGGAATAAAACTTGACAGAGATGGTTAGCATGATATGATACCATCACAGTAATCCAATCAAGATGATCTGATTACGATAAAACTCAAAAGGAATCAAATATTAACATAAATTTTGCAATTTCTGAGCATTAATTAATTTTATTTCAAAGTTCTGTCTCAAAGTTCACCACAACCAAACAAATCAAGAGACACCTAACAATCAGATGTACTTGTTGAGTTTATGGGATACCACCCAACTCCTATTTAGCCAACACAATTAATTTCAGTTAAGCAAGCTATGGTTTTATTAGTTTATATGTATCTCTCTTTTCAAATTCCAATACATCAAAAGTCAAGACTGTCATCCCTTATACAAACAGATGAGAGAGATCCATTTAAAATCAGAGCTCTAGCAGCTTTTAGGCGGTACATTTCATGCATCGTTGACCATAAACATGTCGAGTTTGTATGCTGAAAAAGAAAAGAAAAAAACAAACAAACAAACAATCAAACAATCAAACTCATAAAGTCTTTGAAATAATCATAAAAACATCCAAACCCACTTTTAAGCATAAATTCAGATTTTCAGAATAGATCAGCAATAGAATATTTCTTTAATTTATTAAAAGCTGTCCACAAGATAATAATTTTATTCTTCAAAGTTCTGTGAGAATACTAGAAAGGGATATATTGGAAATAATAGTAGGTTATTAGTAAGGGCACAGTGGTAATTAGTTAGGAGTAACTTAGACATGAATAGGGGAGTTAGAGTTCTTAGGAGCGAGGATCATTTTGGTAAGTCAGTCCTTACTGGATTGGTTGTGTGGGAGACACATAGCTGTTTCAAAAGGTTGTTGATATCGTAATATAGTAATCTTTAATGCTTTCATACATTTTATGTGTTTGGTATCAAACCACGTTTGTCCTGATAAAATTAAGAAGGAAAAAGAAAAGGCTAGAAAAGTAGAAGAGAAGATGGAGGGTATAGATTGAGATATCGTTGAGATTATTTTGGTGAGAATTGTCTTTTGTGTGACTTTGGAGGAGAGATAGCCATGTCTATTGACATATTGTAACTTCTATTCTAATATATTACTATTTTGTATTTATTTATGTTTTCTTTGAGTTTTTTGTGTTTGGGCACGGCAATTTGTTAGTAAGTTCATCATAGAATGCCACCAGAAAAATAGGGGCAGTGAGGGGACGAATATGAAAAATAGTCATAAACTTAAGCTAACTAAACAAATTATTTTCAATGTGAGGCGATACTAACTGCGAAATGGACAGCCAACAAGGATTTGTTGCCATAACTACCCTGTCAATTTTATTAAAATGGAAAGAACTAATGCTATTGTTTTCTTTCTGGAGCAACGCCATATTGACAGCTAAATGGATAGCCAAAAAAGATTCTTCAATATAACTCACAAGTCACAACTTAAGGGTTATCTTGTAGTTCTTGATCTTTTATATTTCAATATCATTCTAGTTGTTTGGGTTCTAACTTCTATCGCCTAGGGTAGAGCCGTTTTTTTTTTTTTTAATTTATAAATGAGAAGCAAGAAAATATACTCAACAAAAGGGGAGAACACAACCTAAAGACCTTAGGGGTGAGAGATCTCTAAGCCTAATTTGGAGGAGGCCTAGGGCTAGATTTTTGTTGAAATTGGTGGTTTAAGAGATTCATTCAATAATCAAACTTCCTCGTTGATTTGCTAAGACTTGATTTTGTGCATTAGTTTGTTGGGGTTTCATTTGCATTAAAATAAGTGGGTTTTGGGAGAACTACATTTCTTTTTCTAAACTTAGTGGATAAGTGTAATGGAAGCCTAACTAAAGGTCAAAATTGTGACATACATTTCGATGAAATTGAAGTTTATGAACAAATTGCCAAGTTTCAGGAGTCGATATTCAATTTTCTGTTTATTTACTATAACTTTTTTATAAGAAAAGTTTCTGTTTCCTTCCTATAACAAAAATCTCGGTGAGACTGTACTTGGTCAGTTGTTTTTCATGTGTTATCTTGACCTATTTTTAGAACAATTTAAGTTAATATTCCAAATGTTTCTCATGAAGGAGCTAGAACATAATTTAAGCTTGGTCACAAATTTCCCCATGATTTAAAATTTCCTTTCTCGCGCTCCCATCAAATCCAATAAATCAGAACTATAATTCCACTACAAGCAACCATCTATACACAAGAACAATGGTTGCATACATTCAAAAAATCCAAAACAGCCTACTCTTCAAACAATCAAAATTTGTATGCCATCTCTTGATTATATCTACAGAAGTGTAATCTAATAACAACCAACACCCACCAACAGAATTCTAGGTCTATCCCTGCCACAAAACTGTACAAGCACTCAAAACCCTGGAAACCAGAACAAGAAAATCATGAAATCAAAAAAAAAAAAAAAAAAATTGAAAAATGATGAAGGTTCCAACCTCTATAAGCAGAATCAATAGGCCGATCCGGCAAATTTCCATCGGAAAGGAACGGTGGCAGCCAAAAAATAGCAGAAAGAAACACAGCCGCCGATAATAACAGGAAGAAGACACATCTCACCGCAATCAGTCTACGAATCCCAGAGCACCCACCGCCGCCGCATCTGCTCTCCACATTCCGGTCAGAAAGCTCAGAGGAGCTCACTCCAACCGGCAGCGGCTGTTCTTCTTCACTCTTTCCCATGGAAGCAATGCATGTGAAGTGGGGTTAA

mRNA sequence

ATGAGTCATTTGGACTTTCCACTGGAGATGAACCAGCTTCGGGAGCAGATGATACCCCATTCTTCAGTGCATGTGAGTATGCAGCATCCTGATTGTGGTGGTGGTGGTGATGGTGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGGTGGTGGTGAGAATGAGGCAGAGGCGCAGGTGAAGGTGACCGAGCACTGCCACCACCACCAAGAGAGTGAATCAATAGGCCGATCCGGCAAATTTCCATCGGAAAGGAACGGTGGCAGCCAAAAAATAGCAGAAAGAAACACAGCCGCCGATAATAACAGGAAGAAGACACATCTCACCGCAATCAGTCTACGAATCCCAGAGCACCCACCGCCGCCGCATCTGCTCTCCACATTCCGGTCAGAAAGCTCAGAGGAGCTCACTCCAACCGGCAGCGGCTGTTCTTCTTCACTCTTTCCCATGGAAGCAATGCATGTGAAGTGGGGTTAA

Coding sequence (CDS)

ATGAGTCATTTGGACTTTCCACTGGAGATGAACCAGCTTCGGGAGCAGATGATACCCCATTCTTCAGTGCATGTGAGTATGCAGCATCCTGATTGTGGTGGTGGTGGTGATGGTGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGGTGGTGGTGAGAATGAGGCAGAGGCGCAGGTGAAGGTGACCGAGCACTGCCACCACCACCAAGAGAGTGAATCAATAGGCCGATCCGGCAAATTTCCATCGGAAAGGAACGGTGGCAGCCAAAAAATAGCAGAAAGAAACACAGCCGCCGATAATAACAGGAAGAAGACACATCTCACCGCAATCAGTCTACGAATCCCAGAGCACCCACCGCCGCCGCATCTGCTCTCCACATTCCGGTCAGAAAGCTCAGAGGAGCTCACTCCAACCGGCAGCGGCTGTTCTTCTTCACTCTTTCCCATGGAAGCAATGCATGTGAAGTGGGGTTAA

Protein sequence

MSHLDFPLEMNQLREQMIPHSSVHVSMQHPDCGGGGDGGDGGDGGGDGGGGGENEAEAQVKVTEHCHHHQESESIGRSGKFPSERNGGSQKIAERNTAADNNRKKTHLTAISLRIPEHPPPPHLLSTFRSESSEELTPTGSGCSSSLFPMEAMHVKWG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC10G201530.1CcUC10G201530.1mRNA