CcUC10G200540 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G200540
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ribonuclease MC-like
Location	CicolChr10: 27467709 .. 27468627 (+)
RNA-Seq Expression	CcUC10G200540
Synteny	CcUC10G200540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCGTTAAACAAATTTCGTGTTCTGTTAAGAATAGAAACCAAAAAAATAGTTACCATAGTTTCTGTTTTTTTCAAAATAGAAAACCCAAAAAAATATTTACAAAATGAGGTCTCAAATCAACATCCTATGTTTTCTAAATTTTAATTAAATAATAAAAAATAGTAGATACATACTTTAGTCTCTAACATTTAATATTTGGATTTGATGCTACCTTAAATTTTTTAAATTTTAGATTATTTCTTTAAGGTTTGTAAATTTCAAATTTGACTAATCATAAACGACTAGTTAGGCCTTAAGAGAAGAAAAGTCAAAGATTCAACAATCATCTAAGAAATTAGGAATTATAAACTTTGTTTCACTTAGATGAATGAATTCGTTTTCTTAATTTTTCTCAATTCATTAAATATTATGTCAATAACTAGTTTTAATAATAATATATATAGGTAGAAAGAAAAAATGTATGTGCTTAACATATAAATGTGTTGGTATGTTTAGATTGCACACTTAGAAAATGATTTGAACATGGTTTGGCCAAATGTGATAACGGGAAACAACATATTCTTTTGGGGTTACGAGTGGAACAAACATGGAATTTGCTCAGAAAGCAAGTTCGACCAGGCAACATACTTCCAGAAAGCGATAAACTTGAGGTACCGTATCAATCTTCTTGGCGTCATGAGAGTTGGTGGAGTAGTACCAAACGGACACTTAAAGGCGAAGCAAAGAATAGAAAGCTTAATCGCATCCCGTTTTGGGGGGGATCCAATTCTTCGGTGTAAAACAGCATCAAACTGCCAAGTCCTATTGACGGATGTGCTTTGATGACGATGCTGTCACTCCTATACACTGCAATAAAGCAAGTTCCAATTGTCCTGGGTGCTTTATCTTTTGAGAATAAACTCTTTCATTCTCAT

mRNA sequence

ATGGATCAAAATGATTTGAACATGGTTTGGCCAAATGTGATAACGGGAAACAACATATTCTTTTGGGGTTACGAGTGGAACAAACATGGAATTTGCTCAGAAAGCAAGTTCGACCAGGCAACATACTTCCAGAAAGCGATAAACTTGAGGTACCGTATCAATCTTCTTGGCGTCATGAGAGTTGGTGGAGTAGTACCAAACGGACACTTAAAGGCGAAGCAAAGAATAGAAAGCTTAATCGCATCCCGTTTTGGGGGGGATCCAATTCTTCGCATCAAACTGCCAAGTCCTATTGACGGATGTGCTTTGATGACGATGCTGTCACTCCTATACACTGCAATAAAGCAAGTTCCAATTGTCCTGGGTGCTTTATCTTTTGAGAATAAACTCTTTCATTCTCAT

Coding sequence (CDS)

ATGGATCAAAATGATTTGAACATGGTTTGGCCAAATGTGATAACGGGAAACAACATATTCTTTTGGGGTTACGAGTGGAACAAACATGGAATTTGCTCAGAAAGCAAGTTCGACCAGGCAACATACTTCCAGAAAGCGATAAACTTGAGGTACCGTATCAATCTTCTTGGCGTCATGAGAGTTGGTGGAGTAGTACCAAACGGACACTTAAAGGCGAAGCAAAGAATAGAAAGCTTAATCGCATCCCGTTTTGGGGGGGATCCAATTCTTCGCATCAAACTGCCAAGTCCTATTGACGGATGTGCTTTGATGACGATGCTGTCACTCCTATACACTGCAATAAAGCAAGTTCCAATTGTCCTGGGTGCTTTATCTTTTGAGAATAAACTCTTTCATTCTCAT

Protein sequence

MDQNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVGGVVPNGHLKAKQRIESLIASRFGGDPILRIKLPSPIDGCALMTMLSLLYTAIKQVPIVLGALSFENKLFHSH

Homology

[Close]

BLAST of CcUC10G200540 vs. NCBI nr
Match: XP_038905534.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 159.1 bits (401), Expect = 2.7e-35
Identity = 74/109 (67.89%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 3   QNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVG 62
           +NDLN+VWPNVITGNN FFWG+EWNKHGICSESKFDQA YFQ AIN+R+ I+LL VMR G
Sbjct: 87  ENDLNIVWPNVITGNNKFFWGHEWNKHGICSESKFDQAAYFQTAINMRHSIDLLSVMRTG 146

Query: 63  GVVPNGHLKAKQRIESLIASRFGGDPILRIKLPSPIDGCALMTMLSLLY 112
           GV+PNG  KAKQR+ES+I+S FG DPILR K  S  +G  L+T + + +
Sbjct: 147 GVIPNGASKAKQRVESVISSHFGKDPILRCKTAS--NGQVLLTEVVMCF 193

[Close]

BLAST of CcUC10G200540 vs. NCBI nr
Match: XP_008443402.1 (PREDICTED: ribonuclease MC-like [Cucumis melo])

HSP 1 Score: 151.4 bits (381), Expect = 5.7e-33
Identity = 69/109 (63.30%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 3   QNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVG 62
           ++DLN+VWPNV+TGNN FFWG+EWNKHGICSESKFDQA YFQ AIN+R+ I+LL V+R G
Sbjct: 87  ESDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDQAKYFQTAINMRHSIDLLSVLRTG 146

Query: 63  GVVPNGHLKAKQRIESLIASRFGGDPILRIKLPSPIDGCALMTMLSLLY 112
           G+VPNG  KAKQR+E+ I+S F  DPILR K  S  +G  L+T + + +
Sbjct: 147 GIVPNGASKAKQRVETAISSHFAKDPILRCKTAS--NGQVLLTEIVICF 193

[Close]

BLAST of CcUC10G200540 vs. NCBI nr
Match: KAA0053769.1 (ribonuclease MC-like [Cucumis melo var. makuwa] >TYK25633.1 ribonuclease MC-like [Cucumis melo var. makuwa])

HSP 1 Score: 151.4 bits (381), Expect = 5.7e-33
Identity = 69/109 (63.30%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 3   QNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVG 62
           ++DLN+VWPNV+TGNN FFWG+EWNKHGICSESKFDQA YFQ AIN+R+ I+LL V+R G
Sbjct: 17  ESDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDQAKYFQTAINMRHSIDLLSVLRTG 76

Query: 63  GVVPNGHLKAKQRIESLIASRFGGDPILRIKLPSPIDGCALMTMLSLLY 112
           G+VPNG  KAKQR+E+ I+S F  DPILR K  S  +G  L+T + + +
Sbjct: 77  GIVPNGASKAKQRVETAISSHFAKDPILRCKTAS--NGQVLLTEIVICF 123

[Close]

BLAST of CcUC10G200540 vs. NCBI nr
Match: XP_004147499.1 (ribonuclease MC [Cucumis sativus] >KGN59560.1 hypothetical protein Csa_002553 [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 5.7e-33
Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 3   QNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVG 62
           +NDLN+VWPNV+TGNN FFWG+EWNKHGICSESKFD+A YFQ AIN+R+ I+LL V+R G
Sbjct: 88  ENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKYFQTAINMRHGIDLLSVLRTG 147

Query: 63  GVVPNGHLKAKQRIESLIASRFGGDPILRIKLPSPIDGCALMTMLSLLY 112
           GV PNG  KAKQR+E+ I+S FG DPILR K  S  +G  L+T + + +
Sbjct: 148 GVGPNGASKAKQRVETAISSHFGKDPILRCKKAS--NGQVLLTEIVMCF 194

[Close]

BLAST of CcUC10G200540 vs. NCBI nr
Match: XP_022142280.1 (ribonuclease MC-like [Momordica charantia])

HSP 1 Score: 139.8 bits (351), Expect = 1.7e-29
Identity = 58/91 (63.74%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 3   QNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVG 62
           QNDLN VWPNVITGNN FFWG+EWNKHGICSESKFD   YFQ AIN+R  ++L+  +RVG
Sbjct: 92  QNDLNRVWPNVITGNNRFFWGHEWNKHGICSESKFDMKAYFQMAINMRDSLDLMNALRVG 151

Query: 63  GVVPNGHLKAKQRIESLIASRFGGDPILRIK 94
           G+ PNG  K++QR++S I ++FG +P+LR +
Sbjct: 152 GLAPNGRTKSRQRVQSAIRAQFGKEPVLRCR 182

[Close]

BLAST of CcUC10G200540 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.7e-20
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 3   QNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVG 62
           Q+ LN +WPNV+  NN  FW +EW KHG CSES F+QA YF+ A+++R   +++G +R  
Sbjct: 63  QSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRPH 122

Query: 63  GVVPNGHLKAKQRIESLIASRFGGDPILRIK 94
              PNG  K++Q I+  + ++FG  P LR +
Sbjct: 123 AAGPNGRTKSRQAIKGFLKAKFGKFPGLRCR 153

[Close]

BLAST of CcUC10G200540 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.4e-12
Identity = 33/81 (40.74%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 10  WPNVI--TGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVGGVVPN 69
           WP +   +G+   FW +EW KHG CSES  DQ  YFQ A+NL+ + NLLG +   G+ P+
Sbjct: 102 WPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAGINPD 161

Query: 70  GHLKAKQRIESLIASRFGGDP 89
           G   + + I   I    G  P
Sbjct: 162 GKSYSLESIRDSIKESIGFTP 182

[Close]

BLAST of CcUC10G200540 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.1e-10
Identity = 30/87 (34.48%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 4   NDLNMVWPNVITGNN--IFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRV 63
           +DL   WP +   +N  + FW +EW KHG C+ES+ DQ  YF+  + L+ + NLL  +  
Sbjct: 88  SDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELDQHDYFEAGLKLKQKANLLHALTN 147

Query: 64  GGVVPNGHLKAKQRIESLIASRFGGDP 89
            G+ P+      + IE+ I    G  P
Sbjct: 148 AGIKPDDKFYEMKDIENTIKQVVGFAP 174

[Close]

BLAST of CcUC10G200540 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08
Identity = 29/82 (35.37%), Postives = 47/82 (57.32%), Query Frame = 0


Query: 10  WPNVI--TGNNIFFWGYEWNKHGICSESKF-DQATYFQKAINLRYRINLLGVMRVGGVVP 69
           WP +   +G+   FW +EW KHG C+ES   +Q  YF+KA++L+ +I+LL +++   + P
Sbjct: 101 WPTLACPSGSGSTFWSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHP 160

Query: 70  NGHLKAKQRIESLIASRFGGDP 89
           +G       I + I S  G  P
Sbjct: 161 DGESYDLVNIRNAIKSAIGYTP 182

[Close]

BLAST of CcUC10G200540 vs. ExPASy Swiss-Prot
Match: P81477 (Ribonuclease Phyb OS=Physarum polycephalum OX=5791 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.5e-08
Identity = 28/89 (31.46%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 2   DQNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRV 61
           D  D   VWP+  TG+N  FW +EW+KHG C  S + +  +F   ++L  + ++   +  
Sbjct: 53  DLIDTMQVWPS-FTGDNASFWSHEWSKHGTC--SGYAEHDFFATVLSLYDQYDVKSALDN 112

Query: 62  GGVVPNGHLKAKQRIESLIASRFGGDPIL 91
           GG+ P     +   + S+I    GG P+L
Sbjct: 113 GGIEPGSSSVSSDSLISVITDNIGGVPVL 138

[Close]

BLAST of CcUC10G200540 vs. ExPASy TrEMBL
Match: A0A5A7UJY4 (Ribonuclease MC-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007930 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-33
Identity = 69/109 (63.30%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 3   QNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVG 62
           ++DLN+VWPNV+TGNN FFWG+EWNKHGICSESKFDQA YFQ AIN+R+ I+LL V+R G
Sbjct: 17  ESDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDQAKYFQTAINMRHSIDLLSVLRTG 76

Query: 63  GVVPNGHLKAKQRIESLIASRFGGDPILRIKLPSPIDGCALMTMLSLLY 112
           G+VPNG  KAKQR+E+ I+S F  DPILR K  S  +G  L+T + + +
Sbjct: 77  GIVPNGASKAKQRVETAISSHFAKDPILRCKTAS--NGQVLLTEIVICF 123

[Close]

BLAST of CcUC10G200540 vs. ExPASy TrEMBL
Match: A0A0A0LC37 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G825050 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-33
Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 3   QNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVG 62
           +NDLN+VWPNV+TGNN FFWG+EWNKHGICSESKFD+A YFQ AIN+R+ I+LL V+R G
Sbjct: 88  ENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKYFQTAINMRHGIDLLSVLRTG 147

Query: 63  GVVPNGHLKAKQRIESLIASRFGGDPILRIKLPSPIDGCALMTMLSLLY 112
           GV PNG  KAKQR+E+ I+S FG DPILR K  S  +G  L+T + + +
Sbjct: 148 GVGPNGASKAKQRVETAISSHFGKDPILRCKKAS--NGQVLLTEIVMCF 194

[Close]

BLAST of CcUC10G200540 vs. ExPASy TrEMBL
Match: A0A1S3B8Q3 (Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103486996 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-33
Identity = 69/109 (63.30%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 3   QNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVG 62
           ++DLN+VWPNV+TGNN FFWG+EWNKHGICSESKFDQA YFQ AIN+R+ I+LL V+R G
Sbjct: 87  ESDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDQAKYFQTAINMRHSIDLLSVLRTG 146

Query: 63  GVVPNGHLKAKQRIESLIASRFGGDPILRIKLPSPIDGCALMTMLSLLY 112
           G+VPNG  KAKQR+E+ I+S F  DPILR K  S  +G  L+T + + +
Sbjct: 147 GIVPNGASKAKQRVETAISSHFAKDPILRCKTAS--NGQVLLTEIVICF 193

[Close]

BLAST of CcUC10G200540 vs. ExPASy TrEMBL
Match: A0A6J1CKH7 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111012440 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 8.2e-30
Identity = 58/91 (63.74%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 3   QNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVG 62
           QNDLN VWPNVITGNN FFWG+EWNKHGICSESKFD   YFQ AIN+R  ++L+  +RVG
Sbjct: 92  QNDLNRVWPNVITGNNRFFWGHEWNKHGICSESKFDMKAYFQMAINMRDSLDLMNALRVG 151

Query: 63  GVVPNGHLKAKQRIESLIASRFGGDPILRIK 94
           G+ PNG  K++QR++S I ++FG +P+LR +
Sbjct: 152 GLAPNGRTKSRQRVQSAIRAQFGKEPVLRCR 182

[Close]

BLAST of CcUC10G200540 vs. ExPASy TrEMBL
Match: A0A6J1FBD8 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111442477 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.4e-29
Identity = 65/103 (63.11%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 3   QNDLNMVWPNVITGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVG 62
           +NDLN+VWPN+ITGN+ +FWG+EWN HGICSESKFDQ  YFQ +INLR+ INLL  +RV 
Sbjct: 86  ENDLNIVWPNLITGNHKWFWGHEWNTHGICSESKFDQKAYFQTSINLRHNINLLSALRVQ 145

Query: 63  GVVPNGHLKAKQRIESLIASRFGGDPILRIKLPSPIDGCALMT 106
           GVVPNG  K+KQR+ES I S F   P+LR K  S  +G  L+T
Sbjct: 146 GVVPNGASKSKQRVESAIISHFKKIPVLRCKTAS--NGQVLLT 186

[Close]

BLAST of CcUC10G200540 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 72.4 bits (176), Expect = 3.1e-13
Identity = 33/81 (40.74%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 10  WPNVI--TGNNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVGGVVPN 69
           WP +   +G+   FW +EW KHG CSES  DQ  YFQ A+NL+ + NLLG +   G+ P+
Sbjct: 102 WPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAGINPD 161

Query: 70  GHLKAKQRIESLIASRFGGDP 89
           G   + + I   I    G  P
Sbjct: 162 GKSYSLESIRDSIKESIGFTP 182

[Close]

BLAST of CcUC10G200540 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 64.7 bits (156), Expect = 6.5e-11
Identity = 30/87 (34.48%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 4   NDLNMVWPNVITGNN--IFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRV 63
           +DL   WP +   +N  + FW +EW KHG C+ES+ DQ  YF+  + L+ + NLL  +  
Sbjct: 88  SDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELDQHDYFEAGLKLKQKANLLHALTN 147

Query: 64  GGVVPNGHLKAKQRIESLIASRFGGDP 89
            G+ P+      + IE+ I    G  P
Sbjct: 148 AGIKPDDKFYEMKDIENTIKQVVGFAP 174

[Close]

BLAST of CcUC10G200540 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 64.3 bits (155), Expect = 8.5e-11
Identity = 30/87 (34.48%), Postives = 45/87 (51.72%), Query Frame = 0


Query: 4   NDLNMVWPNVITGNN--IFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRV 63
           + L   WP +   +N    FW +EW KHG CSES  DQ  YF+ A+ L+ + NLL +++ 
Sbjct: 94  SSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSESVMDQHEYFENALKLKQKANLLQILKN 153

Query: 64  GGVVPNGHLKAKQRIESLIASRFGGDP 89
            G+ P+       +I + I    G  P
Sbjct: 154 SGINPDDGFYNLDKITNAIKDGIGFTP 180

[Close]

BLAST of CcUC10G200540 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.7e-09
Identity = 24/72 (33.33%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 17  NNIFFWGYEWNKHGICSESKFDQATYFQKAINLRYRINLLGVMRVGGVVPNGHLKAKQRI 76
           N    W +EWNKHG C +S FDQ +YF+  +  +++++LL ++   G+ PN    +   I
Sbjct: 109 NETNLWEHEWNKHGTCVQSIFDQHSYFRTNLKFKHKVHLLNILIQKGIKPNDGFYSLDEI 168

Query: 77  ESLIASRFGGDP 89
           ++ I    G  P
Sbjct: 169 KNAIKCAIGFAP 180

[Close]

BLAST of CcUC10G200540 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 48.1 bits (113), Expect = 6.3e-06
Identity = 23/62 (37.10%), Postives = 31/62 (50.00%), Query Frame = 0


Query: 11  PNVITGNNIFFWGYEWNKHGICSESKF-DQATYFQKAINLRYRINLLGVMRVGGVVPNGH 70
           P+   G    FWG+EW KHG CS   F D+  YF   +NL  + N+  V+   G V +  
Sbjct: 115 PSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTTLNLYLKHNVTDVLYQAGYVASNS 174

Query: 71  LK 72
            K
Sbjct: 175 EK 176

The following BLAST results are available for this feature:

BLAST of CcUC10G200540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905534.1	2.7e-35	67.89	ribonuclease MC-like [Benincasa hispida]	[more]
XP_008443402.1	5.7e-33	63.30	PREDICTED: ribonuclease MC-like [Cucumis melo]	[more]
KAA0053769.1	5.7e-33	63.30	ribonuclease MC-like [Cucumis melo var. makuwa] >TYK25633.1 ribonuclease MC-like...	[more]
XP_004147499.1	5.7e-33	64.22	ribonuclease MC [Cucumis sativus] >KGN59560.1 hypothetical protein Csa_002553 [C...	[more]
XP_022142280.1	1.7e-29	63.74	ribonuclease MC-like [Momordica charantia]	[more]

BLAST of CcUC10G200540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23540	9.7e-20	43.96	Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1	[more]
P42813	4.4e-12	40.74	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]
P42815	9.1e-10	34.48	Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1	[more]
P80022	1.0e-08	35.37	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]
P81477	6.5e-08	31.46	Ribonuclease Phyb OS=Physarum polycephalum OX=5791 PE=1 SV=1	[more]

BLAST of CcUC10G200540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UJY4	2.7e-33	63.30	Ribonuclease MC-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352...	[more]
A0A0A0LC37	2.7e-33	64.22	Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G825050 PE=3 SV=1	[more]
A0A1S3B8Q3	2.7e-33	63.30	Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103486996 PE=3 SV=1	[more]
A0A6J1CKH7	8.2e-30	63.74	Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111012440 PE=3 SV=1	[more]
A0A6J1FBD8	1.4e-29	63.11	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111442477 PE=3 SV=1	[more]

BLAST of CcUC10G200540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02990.1	3.1e-13	40.74	ribonuclease 1	[more]
AT1G26820.1	6.5e-11	34.48	ribonuclease 3	[more]
AT1G14220.1	8.5e-11	34.48	Ribonuclease T2 family protein	[more]
AT1G14210.1	2.7e-09	33.33	Ribonuclease T2 family protein	[more]
AT2G39780.1	6.3e-06	37.10	ribonuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 2..112 e-value: 9.6E-21 score: 76.6
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 4..94
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 4..90 e-value: 7.3E-18 score: 65.4
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 3..88
IPR033130	Ribonuclease T2, His active site 2	PROSITE	PS00531	RNASE_T2_2	coord: 21..32

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G200540.1	CcUC10G200540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006401	RNA catabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding