CcUC10G200360 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC10G200360
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionGibberellin regulated protein
LocationCicolChr10: 27237219 .. 27238412 (+)
RNA-Seq ExpressionCcUC10G200360
SyntenyCcUC10G200360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCCTTCACAGTTCCCCCTCCGCCCCCTTCTATTTATACCCAACACAGCCGAGCTCCCCAAACTCAAATACCCCATTTCCTATTTCAACCTTCTTATTCTTCCTTTGTACCCTTCCAATGGCGATGGCTAAGTTCGCTGCTCTCTTGCTCCTCGCCCTCATTGCTTTTTCCATGCTTCAGACCACTGTGAGACTCTTTGCTCCGCTACCTTACTTCTCTTCTTTCCGGTCCCTCTGTCTTTTTTCTTCACAGAACTGACTCTGTTTTTTTCTTTGTTGTTCGATCCGTTTCTACAGGTCATGGCCGGCAGTAGTGGTCGAAACAGGGTAAAACTCCTTTTCTACTACTAACTCCCCTTTCACCCGACATCCGTGTTTCCAATGTTGGATCATTTTACCATTGCGGCATTTTGTCGAACACTTAAGGTTTACTCTGTTCTTGGGTTTGAAAATGGTCTTTCGTACTCTCAAATTCACTCATTTGCTGTAGATCAAGCTTTATTGCGGCATTTTGTCGAACACTTTGTAGTTGTACTCGTATTTTGACTAGCATTGATCTTGACTTTGAGGCACACAAAACTTTACTTTTACTCCCCTGCTAACGTAAATCAGGCATTAGAACTCTCAAATCAACAATTTGTTATAGCGGCACTTTGTAATTGTACTCACTACTCACAATTTGGCTTTTTTTCAGAACCCATATGGACCAGGGAGCGTCAAATCCTTCCGTGAGTACTCTCCTAATTTACAATGCTGGTTTGAGTTGTATTTACTTGGATTTCTCTGAAATGGGTCTTTTTATTTAAAAAAAAAAATCACAGAATGCCCAAATCGATGTGCCACTCGATGCGGAAAAACACAGTACCACAAGCCATGCATGTTCTTCTGCCAAAAGTGCTGCAGGAAGTGCTTGTGTGTGCCGCCTGGCTACTATGGAAACAAAGCCGTTTGCCCTTGCTACAACAACTGGAAGACAAAGGAAGGAGGACCCAAATGCCCTTAAAAAAAACCCCAATTCATTTTCCTGCTAACTCCATCTCTTTTGTTTCCCCTTTTAAAAAAATGGGGCTCTGTTATGTTTTTGTTATGAACTTTTATTGGAGATGGGGAAGAAAAAAGAAAGACGAGAGAAGAAATTTGTCACTCATTAGATGGGAAGAAATATTGGTTTACTTAATATTATAAGTTATAAT

mRNA sequence

CTTTCCTTCACAGTTCCCCCTCCGCCCCCTTCTATTTATACCCAACACAGCCGAGCTCCCCAAACTCAAATACCCCATTTCCTATTTCAACCTTCTTATTCTTCCTTTGTACCCTTCCAATGGCGATGGCTAAGTTCGCTGCTCTCTTGCTCCTCGCCCTCATTGCTTTTTCCATGCTTCAGACCACTGTCATGGCCGGCAGTAGTGGTCGAAACAGGAACCCATATGGACCAGGGAGCGTCAAATCCTTCCAATGCCCAAATCGATGTGCCACTCGATGCGGAAAAACACAGTACCACAAGCCATGCATGTTCTTCTGCCAAAAGTGCTGCAGGAAGTGCTTGTGTGTGCCGCCTGGCTACTATGGAAACAAAGCCGTTTGCCCTTGCTACAACAACTGGAAGACAAAGGAAGGAGGACCCAAATGCCCTTAAAAAAAACCCCAATTCATTTTCCTGCTAACTCCATCTCTTTTGTTTCCCCTTTTAAAAAAATGGGGCTCTGTTATGTTTTTGTTATGAACTTTTATTGGAGATGGGGAAGAAAAAAGAAAGACGAGAGAAGAAATTTGTCACTCATTAGATGGGAAGAAATATTGGTTTACTTAATATTATAAGTTATAAT

Coding sequence (CDS)

ATGGCGATGGCTAAGTTCGCTGCTCTCTTGCTCCTCGCCCTCATTGCTTTTTCCATGCTTCAGACCACTGTCATGGCCGGCAGTAGTGGTCGAAACAGGAACCCATATGGACCAGGGAGCGTCAAATCCTTCCAATGCCCAAATCGATGTGCCACTCGATGCGGAAAAACACAGTACCACAAGCCATGCATGTTCTTCTGCCAAAAGTGCTGCAGGAAGTGCTTGTGTGTGCCGCCTGGCTACTATGGAAACAAAGCCGTTTGCCCTTGCTACAACAACTGGAAGACAAAGGAAGGAGGACCCAAATGCCCTTAA

Protein sequence

MAMAKFAALLLLALIAFSMLQTTVMAGSSGRNRNPYGPGSVKSFQCPNRCATRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Homology
[Close]
BLAST of CcUC10G200360 vs. NCBI nr
Match: XP_038903602.1 (gibberellin-regulated protein 4 [Benincasa hispida])

HSP 1 Score: 220.3 bits (560), Expect = 7.7e-54
Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 0 

Query: 1   MAMAKFAALLLLALIAFSMLQTTVMAGSSGRNRNPYGPGSVKSFQCPNRCATRCGKTQYH 60
           MAM KFAALLLLALIA SMLQTTVMAGS GRNRNPYGPGSVKSFQCPNRCATRCG+TQYH
Sbjct: 1   MAMPKFAALLLLALIALSMLQTTVMAGSGGRNRNPYGPGSVKSFQCPNRCATRCGRTQYH 60

Query: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104

[Close]
BLAST of CcUC10G200360 vs. NCBI nr
Match: XP_004147472.1 (gibberellin-regulated protein 4 [Cucumis sativus] >KGN59572.1 hypothetical protein Csa_002031 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 2.5e-52
Identity = 97/104 (93.27%), Postives = 99/104 (95.19%), Query Frame = 0 

Query: 1   MAMAKFAALLLLALIAFSMLQTTVMAGSSGRNRNPYGPGSVKSFQCPNRCATRCGKTQYH 60
           MAM KFAALLLLALIA SMLQT VMAG  GRNRNPYGPGSVK+FQCPNRCATRCG+TQYH
Sbjct: 1   MAMPKFAALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYH 60

Query: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104

[Close]
BLAST of CcUC10G200360 vs. NCBI nr
Match: XP_022935665.1 (gibberellin-regulated protein 4-like [Cucurbita moschata] >XP_022983885.1 gibberellin-regulated protein 4 [Cucurbita maxima] >XP_023528273.1 gibberellin-regulated protein 4-like [Cucurbita pepo subsp. pepo] >KAG6580967.1 Gibberellin-regulated protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.0 bits (541), Expect = 1.2e-51
Identity = 98/106 (92.45%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MAMAKFAALLLLALIAFSMLQTTVMAGS--SGRNRNPYGPGSVKSFQCPNRCATRCGKTQ 60
           MAMAKFAA+LLLALIAFSMLQTTVMAG+   GR+RNPYGPGSVK FQCPNRCATRCG+TQ
Sbjct: 1   MAMAKFAAVLLLALIAFSMLQTTVMAGNGRGGRSRNPYGPGSVKIFQCPNRCATRCGRTQ 60

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 106

[Close]
BLAST of CcUC10G200360 vs. NCBI nr
Match: XP_022933448.1 (gibberellin-regulated protein 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 201.8 bits (512), Expect = 2.8e-48
Identity = 90/106 (84.91%), Postives = 98/106 (92.45%), Query Frame = 0 

Query: 1   MAMAKFAALLLLALIAFSMLQTTVMAGS--SGRNRNPYGPGSVKSFQCPNRCATRCGKTQ 60
           MAMAKFAA+L+L+LIA SM +TTVMAG+   GRNRNPYGPGSV  +QCP+RCATRCG+TQ
Sbjct: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQ 62

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 63  YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 108

[Close]
BLAST of CcUC10G200360 vs. NCBI nr
Match: KAG6588372.1 (Gibberellin-regulated protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201.8 bits (512), Expect = 2.8e-48
Identity = 90/106 (84.91%), Postives = 98/106 (92.45%), Query Frame = 0 

Query: 1   MAMAKFAALLLLALIAFSMLQTTVMAGS--SGRNRNPYGPGSVKSFQCPNRCATRCGKTQ 60
           MAMAKFAA+L+L+LIA SM +TTVMAG+   GRNRNPYGPGSV  +QCP+RCATRCG+TQ
Sbjct: 58  MAMAKFAAILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQ 117

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 118 YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 163

[Close]
BLAST of CcUC10G200360 vs. ExPASy Swiss-Prot
Match: P46690 (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana OX=3702 GN=GASA4 PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 3.7e-35
Identity = 73/107 (68.22%), Postives = 80/107 (74.77%), Query Frame = 0 

Query: 3   MAK-FAALLLLALIAFSMLQTTVMAGSSGRN----RNPYGPGSVKSFQCPNRCATRCGKT 62
           MAK + A+ LL LI   MLQT VMA SSG N    +  YGPGS+K  QCP+ C  RC KT
Sbjct: 1   MAKSYGAIFLLTLIVLFMLQTMVMA-SSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKT 60

Query: 63  QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           QYHK C+ FC KCCRKCLCVPPGYYGNK VC CYNNWKT+EGGPKCP
Sbjct: 61  QYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

[Close]
BLAST of CcUC10G200360 vs. ExPASy Swiss-Prot
Match: Q6NMQ7 (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.8e-33
Identity = 63/102 (61.76%), Postives = 74/102 (72.55%), Query Frame = 0 

Query: 3   MAKFAALLLLALIAFSMLQTTVMAGSSGRNRNPYGPGSVKSFQCPNRCATRCGKTQYHKP 62
           MAK     LL  I F+ +  T M+  +  +   YGPGS+KS+QC  +C  RC  T+YHKP
Sbjct: 1   MAKLITSFLLLTILFTFVCLT-MSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKP 60

Query: 63  CMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           CMFFCQKCC KCLCVPPG YGNK VCPCYNNWKT++GGPKCP
Sbjct: 61  CMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]
BLAST of CcUC10G200360 vs. ExPASy Swiss-Prot
Match: A8MR46 (Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 5.4e-26
Identity = 46/60 (76.67%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 45  QCPNRCATRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104
           +C  RC  RC  TQY KPC+FFC KCC KCLCVPPG YGNK VCPCYNNWKTK GGPKCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]
BLAST of CcUC10G200360 vs. ExPASy Swiss-Prot
Match: Q84J95 (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.8e-25
Identity = 52/97 (53.61%), Postives = 61/97 (62.89%), Query Frame = 0 

Query: 8   ALLLLALIAFSMLQTTVMAGSSGRNRNPYGPGSVKSFQCPNRCATRCGKTQYHKPCMFFC 67
           AL  L L+    +   V A   G        G +K  QC ++C+ RC  T + KPCMFFC
Sbjct: 9   ALFFLTLLFLLSVSNLVQAARGG--------GKLKPQQCNSKCSFRCSATSHKKPCMFFC 68

Query: 68  QKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
            KCC+KCLCVPPG +GNK  CPCYNNWKTKEG PKCP
Sbjct: 69  LKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 97

[Close]
BLAST of CcUC10G200360 vs. ExPASy Swiss-Prot
Match: Q6GKX7 (Gibberellin-regulated protein 12 OS=Arabidopsis thaliana OX=3702 GN=GASA12 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.8e-25
Identity = 45/68 (66.18%), Postives = 50/68 (73.53%), Query Frame = 0 

Query: 37  GPGSVKSFQCPNRCATRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 96
           G GS+K  +CP  C  RC  T + KPC+FFC KCC KCLCVP G YG+K  CPCYNNW T
Sbjct: 39  GEGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTT 98

Query: 97  KEGGPKCP 105
           KEGGPKCP
Sbjct: 99  KEGGPKCP 106

[Close]
BLAST of CcUC10G200360 vs. ExPASy TrEMBL
Match: A0A0A0LG20 (Gip1-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G826660 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.2e-52
Identity = 97/104 (93.27%), Postives = 99/104 (95.19%), Query Frame = 0 

Query: 1   MAMAKFAALLLLALIAFSMLQTTVMAGSSGRNRNPYGPGSVKSFQCPNRCATRCGKTQYH 60
           MAM KFAALLLLALIA SMLQT VMAG  GRNRNPYGPGSVK+FQCPNRCATRCG+TQYH
Sbjct: 1   MAMPKFAALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYH 60

Query: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104

[Close]
BLAST of CcUC10G200360 vs. ExPASy TrEMBL
Match: A0A6J1J761 (gibberellin-regulated protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111482365 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.9e-52
Identity = 98/106 (92.45%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MAMAKFAALLLLALIAFSMLQTTVMAGS--SGRNRNPYGPGSVKSFQCPNRCATRCGKTQ 60
           MAMAKFAA+LLLALIAFSMLQTTVMAG+   GR+RNPYGPGSVK FQCPNRCATRCG+TQ
Sbjct: 1   MAMAKFAAVLLLALIAFSMLQTTVMAGNGRGGRSRNPYGPGSVKIFQCPNRCATRCGRTQ 60

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 106

[Close]
BLAST of CcUC10G200360 vs. ExPASy TrEMBL
Match: A0A6J1FBA5 (gibberellin-regulated protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111442454 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.9e-52
Identity = 98/106 (92.45%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MAMAKFAALLLLALIAFSMLQTTVMAGS--SGRNRNPYGPGSVKSFQCPNRCATRCGKTQ 60
           MAMAKFAA+LLLALIAFSMLQTTVMAG+   GR+RNPYGPGSVK FQCPNRCATRCG+TQ
Sbjct: 1   MAMAKFAAVLLLALIAFSMLQTTVMAGNGRGGRSRNPYGPGSVKIFQCPNRCATRCGRTQ 60

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 106

[Close]
BLAST of CcUC10G200360 vs. ExPASy TrEMBL
Match: A0A6J1F4S2 (gibberellin-regulated protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440860 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 90/106 (84.91%), Postives = 98/106 (92.45%), Query Frame = 0 

Query: 1   MAMAKFAALLLLALIAFSMLQTTVMAGS--SGRNRNPYGPGSVKSFQCPNRCATRCGKTQ 60
           MAMAKFAA+L+L+LIA SM +TTVMAG+   GRNRNPYGPGSV  +QCP+RCATRCG+TQ
Sbjct: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQ 62

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 63  YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 108

[Close]
BLAST of CcUC10G200360 vs. ExPASy TrEMBL
Match: A0A4V6A7Y4 (Gip1-like protein OS=Populus alba OX=43335 GN=D5086_0000179890 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-44
Identity = 86/107 (80.37%), Postives = 92/107 (85.98%), Query Frame = 0 

Query: 2   AMAKFAALLLLALIAFSMLQTTVMA----GSSGRNRNPYGPGSVKSFQCPNRCATRCGKT 61
           AMAKF A+ LLALIA SMLQT V+A    G   +NRN YGPGS+KSFQCP++C  RC KT
Sbjct: 30  AMAKFVAVFLLALIAISMLQTLVVASHGRGGHHKNRNQYGPGSLKSFQCPSQCTRRCSKT 89

Query: 62  QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 90  QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 136

[Close]
BLAST of CcUC10G200360 vs. TAIR 10
Match: AT5G15230.1 (GAST1 protein homolog 4 )

HSP 1 Score: 148.7 bits (374), Expect = 2.6e-36
Identity = 73/107 (68.22%), Postives = 80/107 (74.77%), Query Frame = 0 

Query: 3   MAK-FAALLLLALIAFSMLQTTVMAGSSGRN----RNPYGPGSVKSFQCPNRCATRCGKT 62
           MAK + A+ LL LI   MLQT VMA SSG N    +  YGPGS+K  QCP+ C  RC KT
Sbjct: 1   MAKSYGAIFLLTLIVLFMLQTMVMA-SSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKT 60

Query: 63  QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           QYHK C+ FC KCCRKCLCVPPGYYGNK VC CYNNWKT+EGGPKCP
Sbjct: 61  QYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

[Close]
BLAST of CcUC10G200360 vs. TAIR 10
Match: AT1G74670.1 (Gibberellin-regulated family protein )

HSP 1 Score: 141.0 bits (354), Expect = 5.5e-34
Identity = 63/102 (61.76%), Postives = 74/102 (72.55%), Query Frame = 0 

Query: 3   MAKFAALLLLALIAFSMLQTTVMAGSSGRNRNPYGPGSVKSFQCPNRCATRCGKTQYHKP 62
           MAK     LL  I F+ +  T M+  +  +   YGPGS+KS+QC  +C  RC  T+YHKP
Sbjct: 1   MAKLITSFLLLTILFTFVCLT-MSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKP 60

Query: 63  CMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           CMFFCQKCC KCLCVPPG YGNK VCPCYNNWKT++GGPKCP
Sbjct: 61  CMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]
BLAST of CcUC10G200360 vs. TAIR 10
Match: AT5G15230.2 (GAST1 protein homolog 4 )

HSP 1 Score: 136.3 bits (342), Expect = 1.4e-32
Identity = 58/81 (71.60%), Postives = 63/81 (77.78%), Query Frame = 0 

Query: 28  SSGRN----RNPYGPGSVKSFQCPNRCATRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYG 87
           SSG N    +  YGPGS+K  QCP+ C  RC KTQYHK C+ FC KCCRKCLCVPPGYYG
Sbjct: 3   SSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYG 62

Query: 88  NKAVCPCYNNWKTKEGGPKCP 105
           NK VC CYNNWKT+EGGPKCP
Sbjct: 63  NKQVCSCYNNWKTQEGGPKCP 83

[Close]
BLAST of CcUC10G200360 vs. TAIR 10
Match: AT3G10185.1 (Gibberellin-regulated family protein )

HSP 1 Score: 118.2 bits (295), Expect = 3.8e-27
Identity = 46/60 (76.67%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 45  QCPNRCATRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104
           +C  RC  RC  TQY KPC+FFC KCC KCLCVPPG YGNK VCPCYNNWKTK GGPKCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]
BLAST of CcUC10G200360 vs. TAIR 10
Match: AT2G30810.1 (Gibberellin-regulated family protein )

HSP 1 Score: 114.4 bits (285), Expect = 5.5e-26
Identity = 45/68 (66.18%), Postives = 50/68 (73.53%), Query Frame = 0 

Query: 37  GPGSVKSFQCPNRCATRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 96
           G GS+K  +CP  C  RC  T + KPC+FFC KCC KCLCVP G YG+K  CPCYNNW T
Sbjct: 39  GEGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTT 98

Query: 97  KEGGPKCP 105
           KEGGPKCP
Sbjct: 99  KEGGPKCP 106

The following BLAST results are available for this feature:
BLAST of CcUC10G200360 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038903602.17.7e-5496.15gibberellin-regulated protein 4 [Benincasa hispida][more]
XP_004147472.12.5e-5293.27gibberellin-regulated protein 4 [Cucumis sativus] >KGN59572.1 hypothetical prote... [more]
XP_022935665.11.2e-5192.45gibberellin-regulated protein 4-like [Cucurbita moschata] >XP_022983885.1 gibber... [more]
XP_022933448.12.8e-4884.91gibberellin-regulated protein 4-like isoform X2 [Cucurbita moschata][more]
KAG6588372.12.8e-4884.91Gibberellin-regulated protein 4, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CcUC10G200360 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P466903.7e-3568.22Gibberellin-regulated protein 4 OS=Arabidopsis thaliana OX=3702 GN=GASA4 PE=1 SV... [more]
Q6NMQ77.8e-3361.76Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV... [more]
A8MR465.4e-2676.67Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 ... [more]
Q84J957.8e-2553.61Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV... [more]
Q6GKX77.8e-2566.18Gibberellin-regulated protein 12 OS=Arabidopsis thaliana OX=3702 GN=GASA12 PE=3 ... [more]
BLAST of CcUC10G200360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG201.2e-5293.27Gip1-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G826660 PE=3 SV=1[more]
A0A6J1J7615.9e-5292.45gibberellin-regulated protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111482365 PE=3... [more]
A0A6J1FBA55.9e-5292.45gibberellin-regulated protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114424... [more]
A0A6J1F4S21.4e-4884.91gibberellin-regulated protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A4V6A7Y42.0e-4480.37Gip1-like protein OS=Populus alba OX=43335 GN=D5086_0000179890 PE=3 SV=1[more]
BLAST of CcUC10G200360 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G15230.12.6e-3668.22GAST1 protein homolog 4 [more]
AT1G74670.15.5e-3461.76Gibberellin-regulated family protein [more]
AT5G15230.21.4e-3271.60GAST1 protein homolog 4 [more]
AT3G10185.13.8e-2776.67Gibberellin-regulated family protein [more]
AT2G30810.15.5e-2666.18Gibberellin-regulated family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003854Gibberellin regulated proteinPFAMPF02704GASAcoord: 45..104
e-value: 1.2E-21
score: 76.6
NoneNo IPR availablePANTHERPTHR23201EXTENSIN, PROLINE-RICH PROTEINcoord: 1..104
NoneNo IPR availablePANTHERPTHR23201:SF69GIBBERELLIN-REGULATED FAMILY PROTEINcoord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC10G200360.1CcUC10G200360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0009739 response to gibberellin
cellular_component GO:0016021 integral component of membrane