CcUC10G199140 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G199140
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	LOB domain-containing protein
Location	CicolChr10: 25953004 .. 25954092 (+)
RNA-Seq Expression	CcUC10G199140
Synteny	CcUC10G199140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTTGTTTCTCTCTTTGTTCTTGACATATCTTTCTTTTTCTTTAAACCCTTTTTTTCATTTGTAGGAAGATGTCTTCTTCCACCTACTCCAATTCTCCCTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGCCTACCGGATTGTGTTTTCGCGCCGTATTTCCCGCCCGAAGAGCCCCAAAAGTTCGCCAATGTCCACAAGATCTTCGGCGCCAGCAATGTTAGTAAACTGCTGAACGAAGTCCAACCGCATCAGCGGGAGGACGCTGTGAACTCGCTCGCCTATGAGGCCGAGGCGAGGATGAAAGACCCTGTCTATGGCTGCGTTGGTGCCATCTCTATACTCCAAAGGCAAGTCATCAAGCTCCAAAAAGAGCTTGACGCTACCAACGCCGACCTCATTCGCTATGCCTGCAGCGAAATCCCCACTCCATCTCCGTCCTCGTCATCGCAATACGCTCAAAGGTCGTCGTCGACGAGCCACGAAGGAAGCTCATCTACCTCTAGCTATGGTCATTACTATTCTGGTCTCTACTTTTCTCCATGGAGTAACAACAATAATGGCCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAAACATTTTTCCGTTGATATATATCAAATCTTTATAATTTGATCATCACAAGTGGGATAATATATATTCTCATATGTTGATATGGGTGTGTGAAAATTTTATGCATTTTGATTCATAAATATAAATAGAAATTACAAATCACACCTTTTTAATTAGTCTAATTCGTAAATTATATCTCTATGTTTAAAAAATTGGTTTCAAACATTCTTGTAATTTGCAAAATCTAAAGATCAGAAGTACCCTTTTGTTGGATATTAAATATATATCTGTGTGACGTATATAGAATAAGTTTGGTATATCAATTTTTCTTTGTTAAAGTTCACCAATAAAAGGGGGGGTATGATTTGCAAATCATAAGAATCTTTGGAGTCATTTTTAAAATTTAGAGATATGACTTTTGAAATAGACTAAAGTATGAAGGTGCAATTTGCAATTATCTTGATATATATAAATAAATATGTGTTGTATATTTTTTAAGATTTGC

mRNA sequence

ATGTATTTGAAGATGTCTTCTTCCACCTACTCCAATTCTCCCTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGCCTACCGGATTGTGTTTTCGCGCCGTATTTCCCGCCCGAAGAGCCCCAAAAGTTCGCCAATGTCCACAAGATCTTCGGCGCCAGCAATGTTAGTAAACTGCTGAACGAAGTCCAACCGCATCAGCGGGAGGACGCTGTGAACTCGCTCGCCTATGAGGCCGAGGCGAGGATGAAAGACCCTGTCTATGGCTGCGTTGGTGCCATCTCTATACTCCAAAGGCAAGTCATCAAGCTCCAAAAAGAGCTTGACGCTACCAACGCCGACCTCATTCGCTATGCCTGCAGCGAAATCCCCACTCCATCTCCGTCCTCGTCATCGCAATACGCTCAAAGGTCGTCGTCGACGAGCCACGAAGGAAGCTCATCTACCTCTAGCTATGGTCATTACTATTCTGGTCTCTACTTTTCTCCATGGAGTAACAACAATAATGGCCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAAACATTTTTCCGTTGATATATATCAAATCTTTATAATTTGATCATCACAAGTGGGATAATATATATTCTCATATGTTGATATGGGTGTGTGAAAATTTTATGCATTTTGATTCATAAATATAAATAGAAATTACAAATCACACCTTTTTAATTAGTCTAATTCGTAAATTATATCTCTATGTTTAAAAAATTGGTTTCAAACATTCTTGTAATTTGCAAAATCTAAAGATCAGAAGTACCCTTTTGTTGGATATTAAATATATATCTGTGTGACGTATATAGAATAAGTTTGGTATATCAATTTTTCTTTGTTAAAGTTCACCAATAAAAGGGGGGGTATGATTTGCAAATCATAAGAATCTTTGGAGTCATTTTTAAAATTTAGAGATATGACTTTTGAAATAGACTAAAGTATGAAGGTGCAATTTGCAATTATCTTGATATATATAAATAAATATGTGTTGTATATTTTTTAAGATTTGC

Coding sequence (CDS)

ATGTATTTGAAGATGTCTTCTTCCACCTACTCCAATTCTCCCTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGCCTACCGGATTGTGTTTTCGCGCCGTATTTCCCGCCCGAAGAGCCCCAAAAGTTCGCCAATGTCCACAAGATCTTCGGCGCCAGCAATGTTAGTAAACTGCTGAACGAAGTCCAACCGCATCAGCGGGAGGACGCTGTGAACTCGCTCGCCTATGAGGCCGAGGCGAGGATGAAAGACCCTGTCTATGGCTGCGTTGGTGCCATCTCTATACTCCAAAGGCAAGTCATCAAGCTCCAAAAAGAGCTTGACGCTACCAACGCCGACCTCATTCGCTATGCCTGCAGCGAAATCCCCACTCCATCTCCGTCCTCGTCATCGCAATACGCTCAAAGGTCGTCGTCGACGAGCCACGAAGGAAGCTCATCTACCTCTAGCTATGGTCATTACTATTCTGGTCTCTACTTTTCTCCATGGAGTAACAACAATAATGGCCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAA

Protein sequence

MYLKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPTPSPSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK

Homology

[Close]

BLAST of CcUC10G199140 vs. NCBI nr
Match: XP_004141196.1 (LOB domain-containing protein 25 isoform X1 [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 1.2e-94
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 2   YLKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE 61
           Y KMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE
Sbjct: 16  YWKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE 75

Query: 62  VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE 121
           VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE
Sbjct: 76  VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE 135

Query: 122 IPTPSPSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK 181
           IP PSPSSSSQYA+RSSSTSHEGSSSTSSYGHYY+GLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 136 IPAPSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 195

[Close]

BLAST of CcUC10G199140 vs. NCBI nr
Match: XP_038905774.1 (LOB domain-containing protein 25-like [Benincasa hispida])

HSP 1 Score: 354.4 bits (908), Expect = 5.9e-94
Identity = 175/180 (97.22%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 2   YLKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE 61
           Y KMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE
Sbjct: 13  YWKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE 72

Query: 62  VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE 121
           VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE
Sbjct: 73  VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE 132

Query: 122 IPTPSPSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK 181
           IP PSPSSSSQYA++SSSTSHE SSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 133 IPAPSPSSSSQYARKSSSTSHEASSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK 192

[Close]

BLAST of CcUC10G199140 vs. NCBI nr
Match: XP_011652293.1 (LOB domain-containing protein 25 isoform X2 [Cucumis sativus] >KAE8651263.1 hypothetical protein Csa_001141 [Cucumis sativus])

HSP 1 Score: 353.2 bits (905), Expect = 1.3e-93
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 5   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 64
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 65  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPT 124
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIP 
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 120

Query: 125 PSPSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK 182
           PSPSSSSQYA+RSSSTSHEGSSSTSSYGHYY+GLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of CcUC10G199140 vs. NCBI nr
Match: XP_008443563.1 (PREDICTED: LOB domain-containing protein 25-like [Cucumis melo] >KAA0053633.1 LOB domain-containing protein 25-like [Cucumis melo var. makuwa] >TYK00802.1 LOB domain-containing protein 25-like [Cucumis melo var. makuwa])

HSP 1 Score: 352.1 bits (902), Expect = 2.9e-93
Identity = 173/177 (97.74%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 5   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 64
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 65  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPT 124
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE+P 
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 125 PSPSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK 182
           PSPSSSSQYA+RSSSTSHEGSSSTSSYGHYY+GLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of CcUC10G199140 vs. NCBI nr
Match: XP_022152200.1 (LOB domain-containing protein 25-like [Momordica charantia])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 172/183 (93.99%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 2   YLKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE 61
           Y KM+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE
Sbjct: 12  YWKMASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE 71

Query: 62  VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE 121
           VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+E
Sbjct: 72  VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNE 131

Query: 122 I--PTPSPSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDK-G 181
           I  P+PSPSSSSQYA+RSSST+HEGSSSTSSYGHYYSGLYFSPWS NNNGPCGDGHDK G
Sbjct: 132 IPAPSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWS-NNNGPCGDGHDKGG 191

[Close]

BLAST of CcUC10G199140 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 204.1 bits (518), Expect = 1.3e-51
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 8   STYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQR 67
           S Y+NSPCAACKFLRRKC  DCVFAPYFPPEEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 68  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYA 119
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQ+EL+ TNADL+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of CcUC10G199140 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.2e-50
Identity = 96/124 (77.42%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 6   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 65
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 66  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPTP 125
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 126 SPSS 130
           +P +
Sbjct: 123 APGN 126

[Close]

BLAST of CcUC10G199140 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.3e-39
Identity = 90/175 (51.43%), Postives = 120/175 (68.57%), Query Frame = 0


Query: 7   SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQ 66
           +S+ +NSPCAACKFLRRKC P+CVFAPYFPP++PQKFANVHK+FGASNV+KLLNE+ P Q
Sbjct: 2   ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61

Query: 67  REDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPTPS 126
           REDAVNSLAYEA+ R++DPVYGCVG IS+LQ Q+ +LQ +L    ++L +Y    I    
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI---- 121

Query: 127 PSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNG---PCGDGHDKG 179
            +++ Q    +        ++T+   HY+   +F P      G   P G+ +D G
Sbjct: 122 LAATHQSLGINLLAGAADGTATAVRDHYHHHQFF-PREQMFGGLDVPAGNNYDGG 171

[Close]

BLAST of CcUC10G199140 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.7e-38
Identity = 80/145 (55.17%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 11  SNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDA 70
           + SPCAACKFLRRKC PDCVFAPYFPP+ PQKF +VH++FGASNV+KLLNE+ P QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDA 89

Query: 71  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRY--ACSEIPTPSPS 130
           VNSLAYEA+ R++DPVYGCVG ISILQ  + +LQ++L     +L +Y  A +   + +P+
Sbjct: 90  VNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPT 149

Query: 131 SSSQYAQRSSSTSHEGSSSTSSYGH 154
                A+   +    G+ +  + GH
Sbjct: 150 GPQAMAEFIGNAMPNGAHNFINIGH 174

[Close]

BLAST of CcUC10G199140 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-37
Identity = 81/150 (54.00%), Postives = 105/150 (70.00%), Query Frame = 0


Query: 11  SNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDA 70
           + SPCAACKFLRRKC PDCVFAPYFPP+ PQKF +VH++FGASNV+KLLNE+ P+QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 71  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRY-------ACSEIP 130
           VNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L     +L +Y       A +   
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASAS 154

Query: 131 TPSPSSSSQYAQRSSSTSHEGSSSTSSYGH 154
           T + +     A+   +    G+ S  + GH
Sbjct: 155 TGTNNGPHSMAEFIGNAVPNGAQSFINVGH 184

[Close]

BLAST of CcUC10G199140 vs. ExPASy TrEMBL
Match: A0A0A0LI15 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G839790 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 5.8e-95
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 2   YLKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE 61
           Y KMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE
Sbjct: 27  YWKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE 86

Query: 62  VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE 121
           VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE
Sbjct: 87  VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE 146

Query: 122 IPTPSPSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK 181
           IP PSPSSSSQYA+RSSSTSHEGSSSTSSYGHYY+GLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 147 IPAPSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 206

[Close]

BLAST of CcUC10G199140 vs. ExPASy TrEMBL
Match: A0A5D3BPW0 (LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00030 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 173/177 (97.74%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 5   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 64
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 65  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPT 124
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE+P 
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 125 PSPSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK 182
           PSPSSSSQYA+RSSSTSHEGSSSTSSYGHYY+GLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of CcUC10G199140 vs. ExPASy TrEMBL
Match: A0A1S3B938 (LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 173/177 (97.74%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 5   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 64
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 65  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPT 124
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE+P 
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 125 PSPSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK 182
           PSPSSSSQYA+RSSSTSHEGSSSTSSYGHYY+GLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of CcUC10G199140 vs. ExPASy TrEMBL
Match: A0A6J1DD95 (LOB domain-containing protein 25-like OS=Momordica charantia OX=3673 GN=LOC111019975 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.2e-89
Identity = 172/183 (93.99%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 2   YLKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE 61
           Y KM+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE
Sbjct: 12  YWKMASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNE 71

Query: 62  VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE 121
           VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+E
Sbjct: 72  VQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNE 131

Query: 122 I--PTPSPSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDK-G 181
           I  P+PSPSSSSQYA+RSSST+HEGSSSTSSYGHYYSGLYFSPWS NNNGPCGDGHDK G
Sbjct: 132 IPAPSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWS-NNNGPCGDGHDKGG 191

[Close]

BLAST of CcUC10G199140 vs. ExPASy TrEMBL
Match: A0A6J1FAW3 (LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111442374 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.9e-88
Identity = 164/177 (92.66%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 5   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 64
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 65  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPT 124
           HQR+DAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+EIP 
Sbjct: 61  HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA 120

Query: 125 PSPSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK 182
           PSPSSSSQYA+RSSSTSH+GSSSTSSYGHYYS  YFSPWSN++NG CGDGHDK E+K
Sbjct: 121 PSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK 177

[Close]

BLAST of CcUC10G199140 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 204.1 bits (518), Expect = 9.2e-53
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 8   STYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQR 67
           S Y+NSPCAACKFLRRKC  DCVFAPYFPPEEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 68  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYA 119
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQ+EL+ TNADL+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of CcUC10G199140 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 199.1 bits (505), Expect = 3.0e-51
Identity = 96/124 (77.42%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 6   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 65
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 66  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPTP 125
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 126 SPSS 130
           +P +
Sbjct: 123 APGN 126

[Close]

BLAST of CcUC10G199140 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 199.1 bits (505), Expect = 3.0e-51
Identity = 96/124 (77.42%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 6   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 65
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 66  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPTP 125
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 126 SPSS 130
           +P +
Sbjct: 123 APGN 126

[Close]

BLAST of CcUC10G199140 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 199.1 bits (505), Expect = 3.0e-51
Identity = 96/124 (77.42%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 6   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 65
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 66  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPTP 125
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 126 SPSS 130
           +P +
Sbjct: 123 APGN 126

[Close]

BLAST of CcUC10G199140 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 199.1 bits (505), Expect = 3.0e-51
Identity = 96/124 (77.42%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 6   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 65
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 66  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPTP 125
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 126 SPSS 130
           +P +
Sbjct: 123 APGN 126

The following BLAST results are available for this feature:

BLAST of CcUC10G199140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141196.1	1.2e-94	97.78	LOB domain-containing protein 25 isoform X1 [Cucumis sativus]	[more]
XP_038905774.1	5.9e-94	97.22	LOB domain-containing protein 25-like [Benincasa hispida]	[more]
XP_011652293.1	1.3e-93	98.31	LOB domain-containing protein 25 isoform X2 [Cucumis sativus] >KAE8651263.1 hypo...	[more]
XP_008443563.1	2.9e-93	97.74	PREDICTED: LOB domain-containing protein 25-like [Cucumis melo] >KAA0053633.1 LO...	[more]
XP_022152200.1	1.3e-88	93.99	LOB domain-containing protein 25-like [Momordica charantia]	[more]

BLAST of CcUC10G199140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Q3	1.3e-51	84.68	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
Q9FML4	4.2e-50	77.42	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
O04479	3.3e-39	51.43	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	3.7e-38	55.17	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
A2WXT0	1.4e-37	54.00	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]

BLAST of CcUC10G199140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI15	5.8e-95	97.78	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G839790 PE=3 SV...	[more]
A0A5D3BPW0	1.4e-93	97.74	LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B938	1.4e-93	97.74	LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE...	[more]
A0A6J1DD95	6.2e-89	93.99	LOB domain-containing protein 25-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1FAW3	6.9e-88	92.66	LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111442...	[more]

BLAST of CcUC10G199140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27650.1	9.2e-53	84.68	LOB domain-containing protein 25	[more]
AT5G63090.2	3.0e-51	77.42	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	3.0e-51	77.42	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	3.0e-51	77.42	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	3.0e-51	77.42	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 93..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..149
None	No IPR available	PANTHER	PTHR31301:SF12	LOB DOMAIN-CONTAINING PROTEIN 25	coord: 5..168
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 5..168
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 14..110 e-value: 2.5E-42 score: 143.4
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 13..114 score: 27.625731

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G199140.1	CcUC10G199140.1	mRNA