CcUC10G197730 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G197730
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	myb family transcription factor PHL5-like
Location	CicolChr10: 24399120 .. 24402027 (-)
RNA-Seq Expression	CcUC10G197730
Synteny	CcUC10G197730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACATTATGTCCTTATCATTACAAGAAAGTGGACCAAACAGCCTCTCACATATTTCTACATATACCACTTTATTGCTTTACATTTGCTTGTATTCCTTCATATGATTATGCTATGAACTTGAATATGAATGACTACAATGGGTTTTGTCCACTCTCCTATCTGGATTCCCCATTTCATGATTTCTATGCCTTTGAAGGATATCAAACTTTTTCAGAAACAGAGTCTTCATTTGCATCTTCAAACATTAATGATCATCAACATCACTTTCATATCTCTTCTTCTTCTTTTCATTCACCAAACCATCAAGAAGCTCAACATCAGTCAAGCTATTGCCAAGAGTTTAATGATGAGTACCGTTCCTGGTCTTATGAGGAGTTGATGCCAAATGACAACGAAAAGGTCAGTCTATGGCAGTACTTTGCATGCTTTTCATTCCAGAGAGTTAGTTATAATGATAAAACTCATCTCTTTTTCTTTCGGTTTCAATACTACTTACTTCATTTCTGTATAGGATTTTAGTTCATTTCAGTTCATTTCAATTTATATACTTTCAAAATGTCCGTACTGATTTATGTAGGTTACAAAAGTTAGTTCCTATTTTGTAAAAACTATGGGGGTAAAACAAATTAAAATGAATAGACTAAAATGATCATTTTTCAAAAGTACAAAGATCAAATTGAACTAAAAGTAAGAGAACTGAGACCGTCTCAAAGGAGTGCTTAAACTTTTTCTGGTTCTTGTTCTCATATAGTCAAAATCAAGATCCATTTCTAAGGCACCAATTAAATGTAAATTTTGAAACTACATACACCCAATGGAACCAAAAGTAAAATTACTCCGATGACAAAAATAGTATTTAAATCTTTTTTGGTCCTTGTTCTTGTGCTATCAAAATTAAGAATCATTTCTAAGACACGAATTAAATGCAAAATTAGAAATGACAAGAACCAAATTGAACGAAAAGTAAAAATATTGGAACCAAAGTAGTATATAAACTTTTTCTGATTCAAAAGTACATGTAAATATTGCAAGTACAAGGTCCAAACTAAACAAAAAGTAAAAAGTAGTATCTAAACCTTCGCTGGTTCTTATACATGTGCAGTCAAAATCAAAAATCACTTCTAAGACACGAATGAAATGGACCGAAGAACTTCATCAAAAGTTCATCAATTGCATCGATCAGCTCGGAGGAGCTCAAAGTAAGTAACGTATATCATAAATGATTAGGATATGGCCGTCTGAATTAGTAACTTTGAGTTTGTTGCAAAAGTGCAGAAGCCACACCAAAGCAACTCCTTCACTTGATGAAAACTAAAGGATTGACAATCATCCATATAAAAAGCCACTTGCAGGTTTGTTATGCAGAAAAAGCTAACAAAATTTTACTCTCAATTTGTGAATCTTTTGATTTAGTTTTTGATCAAATATTTTTCCTTCAGAAATATCGCATTTCCCAGCATATTCAAGAATTTTCAGAAGGTGTATGTTCTTGTTTTAATCCTAATCTCTATCAAACTAGAAATTTAAGTTAACCAAAACTCTCAACTAAACCAAACAAATAATGATGTCTTTGTGAAGCAGGAAAATCTGAGAGACAAATTAACAAGAGTGGACTGATGCATTGTAACCAAAACTTGTAAGTTTGTGTACTTGGTTTGCATTAACATTAATAACAACAAGAAAATGTTACAAACTTTGATTATATCCAAGCAGAGTGAAGCAGCTGATGGAAGCAGTGAGACAACAACTTGATACTCAGCGTAGTTTGAATGAACAATTGGAGGTCTGATAATCCCATTCCAGAATTTTGTTGATTTTAATGTTTTTTCTAGTTCAACTGTGTTATCTGACTGTATAATGAAATTCTTTAAAAGGAAAAAGAGTAGGACCGTTTTTCTCTCTTTAAAGGAGCATAAATGAGCATTTGGAGCAAGAAGTAGAGTTGTAAATTCTAAGGAGTTGAAAAGTCTAAGACATAAAATTAATATTTTTTAGCCATGGGGCCTATGAATTCCTTGAGCTAGACAAGAAGGGGCGTAGTTCATCTAGAGTGTAAAGAGTTCATAAGACATAAAATTAACATTTTTTAGTTGTGAGCCCCACGAACTCTTTAAGCCAAACAAACAGTGGAGTTCATAACTCTATTACCTCCAATCCCACGGGCCAAACACCCTAAGTAGTTAAAGTGAATCAATTTTAACTTTGAAATTGTGTTACAAGTTTAGAAAGCTGGTAATTGACGTTGGGGGATTGCAAAGTCTTGGTTTTTTAGGGCTCAGGGGTTTAGATGGTGAGAAGAAATGAGTTTTTAGAAGCCAAGATTTGTGTTTAGCTTACGTCTGGATTATAGGTTTAAAATTCATAGAATTGGTGCACAATTTAAGAGATAGGGTTCACATGCTAAAGTTTACAAAACTTAGAGGTTTCATGTTATTTATATTTAGGAGTGTTCAGGATCGCTTATTCATCCGAGACAATTGTGAACCTACTATATGTAGCAGTCAAGGGAGATATTAAACTGTATCTATGGCCATTATAGTTTGAGAACTAGTTTCACTTGCTAGGTTTTAAGTAGCATTTGAAACTAACAAATCCGTGACCTTAGATAATCAAACTCATATGCTAAACGCATCATTATCGCCAAAGACATATTTGAAGTTTTAATTTCGTTCGATTCAACCTCAATTATTAATATTTATAAAGTTTAAGATATACTGATGTTAATGTTTGCTTTTTGGGTACAGATTCAAAAGAACTTGATCTCAGACATAGAAGAACAAATGAAGCAACTCACAGGAGTTTTAGAACTAAGAAGGAAACCTATTGTGTTTAGAAATGACGAGGGAGACTAAAATGGACTTTGCTTGGATCAGAAAAGTGGGCTGTTCTTATCAAGAAAAAA

mRNA sequence

ATGGCAACATTATGTCCTTATCATTACAAGAAAGTGGACCAAACAGCCTCTCACATATTTCTACATATACCACTTTATTGCTTTACATTTGCTTGTATTCCTTCATATGATTATGCTATGAACTTGAATATGAATGACTACAATGGGTTTTGTCCACTCTCCTATCTGGATTCCCCATTTCATGATTTCTATGCCTTTGAAGGATATCAAACTTTTTCAGAAACAGAGTCTTCATTTGCATCTTCAAACATTAATGATCATCAACATCACTTTCATATCTCTTCTTCTTCTTTTCATTCACCAAACCATCAAGAAGCTCAACATCAGTCAAGCTATTGCCAAGAGTTTAATGATGAGTACCGTTCCTGGTCTTATGAGGAGTTGATGCCAAATGACAACGAAAAGTCAAAATCAAAAATCACTTCTAAGACACGAATGAAATGGACCGAAGAACTTCATCAAAAGTTCATCAATTGCATCGATCAGCTCGGAGGAGCTCAAAGAAAATCTGAGAGACAAATTAACAAGAGTGGACTGATGCATTGTAACCAAAACTTAGTGAAGCAGCTGATGGAAGCAGTGAGACAACAACTTGATACTCAGCGTAGTTTGAATGAACAATTGGAGATTCAAAAGAACTTGATCTCAGACATAGAAGAACAAATGAAGCAACTCACAGGAGTTTTAGAACTAAGAAGGAAACCTATTGTGTTTAGAAATGACGAGGGAGACTAAAATGGACTTTGCTTGGATCAGAAAAGTGGGCTGTTCTTATCAAGAAAAAA

Coding sequence (CDS)

ATGGCAACATTATGTCCTTATCATTACAAGAAAGTGGACCAAACAGCCTCTCACATATTTCTACATATACCACTTTATTGCTTTACATTTGCTTGTATTCCTTCATATGATTATGCTATGAACTTGAATATGAATGACTACAATGGGTTTTGTCCACTCTCCTATCTGGATTCCCCATTTCATGATTTCTATGCCTTTGAAGGATATCAAACTTTTTCAGAAACAGAGTCTTCATTTGCATCTTCAAACATTAATGATCATCAACATCACTTTCATATCTCTTCTTCTTCTTTTCATTCACCAAACCATCAAGAAGCTCAACATCAGTCAAGCTATTGCCAAGAGTTTAATGATGAGTACCGTTCCTGGTCTTATGAGGAGTTGATGCCAAATGACAACGAAAAGTCAAAATCAAAAATCACTTCTAAGACACGAATGAAATGGACCGAAGAACTTCATCAAAAGTTCATCAATTGCATCGATCAGCTCGGAGGAGCTCAAAGAAAATCTGAGAGACAAATTAACAAGAGTGGACTGATGCATTGTAACCAAAACTTAGTGAAGCAGCTGATGGAAGCAGTGAGACAACAACTTGATACTCAGCGTAGTTTGAATGAACAATTGGAGATTCAAAAGAACTTGATCTCAGACATAGAAGAACAAATGAAGCAACTCACAGGAGTTTTAGAACTAAGAAGGAAACCTATTGTGTTTAGAAATGACGAGGGAGACTAA

Protein sequence

MATLCPYHYKKVDQTASHIFLHIPLYCFTFACIPSYDYAMNLNMNDYNGFCPLSYLDSPFHDFYAFEGYQTFSETESSFASSNINDHQHHFHISSSSFHSPNHQEAQHQSSYCQEFNDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINCIDQLGGAQRKSERQINKSGLMHCNQNLVKQLMEAVRQQLDTQRSLNEQLEIQKNLISDIEEQMKQLTGVLELRRKPIVFRNDEGD

Homology

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BLAST of CcUC10G197730 vs. NCBI nr
Match: XP_011652834.2 (myb family transcription factor PHL5 [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 3.3e-71
Identity = 164/269 (60.97%), Postives = 180/269 (66.91%), Query Frame = 0


Query: 1   MATLCPYHYKKVDQTASHIFLHIPLYCFTFACIPSYDYAMNLNMNDYNGFCPLSYLDSPF 60
           M TLCPYHYKKVDQTAS+   +  L C  +  +PSYDYAM L MN+Y  FCPLSYLDSPF
Sbjct: 1   MTTLCPYHYKKVDQTASNFPTYNILICCFYPSLPSYDYAMKLMMNEYKEFCPLSYLDSPF 60

Query: 61  HDFYAFEGYQTFSETESSFASSNINDHQHHFHISSSSFHSPNHQEAQHQSSYCQEFNDEY 120
           HDFY FEG QTFSE ESSFASSN ND  HHF I SSSFHSPN QEAQHQS+  QEF+ E 
Sbjct: 61  HDFYVFEGCQTFSEVESSFASSNTNDRHHHFLI-SSSFHSPNPQEAQHQSNCSQEFDGEN 120

Query: 121 RSWSYEELMP-NDNEKSKSKITSKTRMKWTEELHQKFINCIDQLGGAQR----------- 180
            SWS EELMP N N+K KS I SKTR+KWTEELHQ+F NC+DQLGGAQ+           
Sbjct: 121 CSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMK 180

Query: 181 ----------------------------KSERQINKSGLMHCNQNLVKQLMEAVRQQLDT 230
                                       KSERQINK   M  +QN+ KQLME VRQQL  
Sbjct: 181 TKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKETMQGSQNIGKQLMEVVRQQLHA 240

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BLAST of CcUC10G197730 vs. NCBI nr
Match: XP_038904770.1 (myb family transcription factor PHL5-like isoform X2 [Benincasa hispida])

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-68
Identity = 158/241 (65.56%), Postives = 172/241 (71.37%), Query Frame = 0


Query: 40  MNLNMNDYNGFCPLSYLDSPFHDFYAFEGYQTFSETESSFASSNINDHQHHFHISSSSFH 99
           MNL MND NGF PLSYLDSPFHDFY FEGYQTF ETESSFASSN ND  HHFHISSSSFH
Sbjct: 1   MNLMMNDNNGFYPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTND--HHFHISSSSFH 60

Query: 100 SPNHQEAQHQSSYCQEFNDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINC 159
           S N QE QHQSSY QE N ++ S S EELM  DN+KSKS+I SKTR+KW++ELHQKFI+C
Sbjct: 61  SLNPQEDQHQSSYSQESNGDHCSLSCEELMQCDNKKSKSRIVSKTRIKWSKELHQKFIDC 120

Query: 160 IDQLGGAQR---------------------------------------KSERQINKSGLM 219
           +DQLGGAQ+                                       K+ER+ NK  LM
Sbjct: 121 VDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRIFQHIQEFSKGKAERKTNKKELM 180

Query: 220 HCNQNLVKQLMEAVRQQLDTQRSLNEQLEIQKNLISDIEEQMKQLTGVLELRRKPIVFRN 242
             NQN+ KQLMEAVRQQLDTQ SLNEQLE+QKNLIS IEEQMKQL GVLE RRKPIVFRN
Sbjct: 181 QSNQNIGKQLMEAVRQQLDTQSSLNEQLEVQKNLISAIEEQMKQLRGVLEQRRKPIVFRN 239

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BLAST of CcUC10G197730 vs. NCBI nr
Match: XP_038904769.1 (myb family transcription factor PHL5-like isoform X1 [Benincasa hispida])

HSP 1 Score: 270.4 bits (690), Expect = 1.5e-68
Identity = 158/242 (65.29%), Postives = 172/242 (71.07%), Query Frame = 0


Query: 40  MNLNMNDYNGFCPLSYLDSPFHDFYAFEGYQTFSETESSFASSNINDHQHHFHISSSSFH 99
           MNL MND NGF PLSYLDSPFHDFY FEGYQTF ETESSFASSN ND  HHFHISSSSFH
Sbjct: 1   MNLMMNDNNGFYPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTND--HHFHISSSSFH 60

Query: 100 SPNHQEAQHQSSYCQEFNDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINC 159
           S N QE QHQSSY QE N ++ S S EELM  DN+KSKS+I SKTR+KW++ELHQKFI+C
Sbjct: 61  SLNPQEDQHQSSYSQESNGDHCSLSCEELMQCDNKKSKSRIVSKTRIKWSKELHQKFIDC 120

Query: 160 IDQLGGAQR----------------------------------------KSERQINKSGL 219
           +DQLGGAQ+                                        K+ER+ NK  L
Sbjct: 121 VDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRIFQHIQEFSKAGKAERKTNKKEL 180

Query: 220 MHCNQNLVKQLMEAVRQQLDTQRSLNEQLEIQKNLISDIEEQMKQLTGVLELRRKPIVFR 242
           M  NQN+ KQLMEAVRQQLDTQ SLNEQLE+QKNLIS IEEQMKQL GVLE RRKPIVFR
Sbjct: 181 MQSNQNIGKQLMEAVRQQLDTQSSLNEQLEVQKNLISAIEEQMKQLRGVLEQRRKPIVFR 240

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BLAST of CcUC10G197730 vs. NCBI nr
Match: KAE8650941.1 (hypothetical protein Csa_001106 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 1.3e-56
Identity = 140/230 (60.87%), Postives = 152/230 (66.09%), Query Frame = 0


Query: 40  MNLNMNDYNGFCPLSYLDSPFHDFYAFEGYQTFSETESSFASSNINDHQHHFHISSSSFH 99
           M L MN+Y  FCPLSYLDSPFHDFY FEG QTFSE ESSFASSN ND  HHF I SSSFH
Sbjct: 1   MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLI-SSSFH 60

Query: 100 SPNHQEAQHQSSYCQEFNDEYRSWSYEELMP-NDNEKSKSKITSKTRMKWTEELHQKFIN 159
           SPN QEAQHQS+  QEF+ E  SWS EELMP N N+K KS I SKTR+KWTEELHQ+F N
Sbjct: 61  SPNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTN 120

Query: 160 CIDQLGGAQR---------------------------------------KSERQINKSGL 219
           C+DQLGGAQ+                                       KSERQINK   
Sbjct: 121 CVDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKET 180

Query: 220 MHCNQNLVKQLMEAVRQQLDTQRSLNEQLEIQKNLISDIEEQMKQLTGVL 230
           M  +QN+ KQLME VRQQL  Q SLNEQL++QK LIS IEEQMKQL G L
Sbjct: 181 MQGSQNIGKQLMEVVRQQLHAQSSLNEQLKVQKKLISAIEEQMKQLRGNL 229

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BLAST of CcUC10G197730 vs. NCBI nr
Match: TYK10646.1 (protein PHR1-LIKE 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 225.7 bits (574), Expect = 4.3e-55
Identity = 128/210 (60.95%), Postives = 142/210 (67.62%), Query Frame = 0


Query: 40  MNLNMNDYNGFCPLSYLDSPFHDFYAFEGYQTFSETESSFASSNINDHQHHFHISSSSFH 99
           M L MN+YN FCPLSYLDSPFHDFY FEG +TFSE +SSFA SNINDHQHHFHISSSSFH
Sbjct: 1   MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCRTFSEVDSSFAPSNINDHQHHFHISSSSFH 60

Query: 100 SPNHQEAQHQSSYCQEFNDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINC 159
           SPN Q AQHQSS  QEF+ E+ SWS EEL PN N+K KS + SKTR+KWTE+LHQKFINC
Sbjct: 61  SPNPQAAQHQSSCSQEFDGEHCSWSCEELRPNHNKKLKSSMVSKTRIKWTEQLHQKFINC 120

Query: 160 IDQLGGAQR---------------------------------------KSERQINKSGLM 211
           +DQLGGAQ+                                       KSERQINK   M
Sbjct: 121 VDQLGGAQKATPKQLLHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKEPM 180

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BLAST of CcUC10G197730 vs. ExPASy Swiss-Prot
Match: F4J3P7 (Myb family transcription factor PHL13 OS=Arabidopsis thaliana OX=3702 GN=PHL13 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.6e-07
Identity = 46/147 (31.29%), Postives = 69/147 (46.94%), Query Frame = 0


Query: 131 NDNEKSKSKITSKTRMKWTEELHQKFINCIDQLGGAQRKSERQ----INKSGL--MHCNQ 190
           N      S +TSK RM+WT ELH+ F+  I+QLGG++R + +     IN  GL   H   
Sbjct: 226 NAKSPPASSMTSKQRMRWTPELHEAFVEAINQLGGSERATPKAVLKLINSPGLTVYHVKS 285

Query: 191 NLVK-------------------------------------QLMEAVRQQLDTQRSLNEQ 235
           +L K                                     ++ EA+R Q+  Q+ L+EQ
Sbjct: 286 HLQKYRTARYKPELSKDTEEPLVKNLKTIEDIKSLDLKTSIEITEALRLQMKVQKQLHEQ 345

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BLAST of CcUC10G197730 vs. ExPASy Swiss-Prot
Match: Q0WVU3 (Myb family transcription factor PHL5 OS=Arabidopsis thaliana OX=3702 GN=PHL5 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-06
Identity = 66/229 (28.82%), Postives = 100/229 (43.67%), Query Frame = 0


Query: 59  PFHDFYAFEGYQ-----TFSETESSFASSNINDHQHH-------FHISSSSFHSPNHQEA 118
           P  D Y    YQ      F+ T +S AS +++    H          S+S+    N   +
Sbjct: 102 PLPDQYMKPLYQRSCSNDFAATNASSASYSLSFEASHDPQELCRRTYSNSNVTHLNFTSS 161

Query: 119 QHQSSYCQEFNDEYRSWSYE--ELMPNDNEKSKSKITSKTRMKWTEELHQKFINCIDQLG 178
           QHQ            S+S     + PN          +KTR++WT++LH+KF+ C+++LG
Sbjct: 162 QHQPKQSHPRFSSPPSFSIHGGSMAPN--------CVNKTRIRWTQDLHEKFVECVNRLG 221

Query: 179 GAQRKSERQINKS------GLMHCNQNLVK------------------------------ 235
           GA + + + I K        + H   +L K                              
Sbjct: 222 GADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAKYMPESQEGKFEKRACAKELSQLDTR 281

[Close]

BLAST of CcUC10G197730 vs. ExPASy Swiss-Prot
Match: Q8GUN5 (Protein PHR1-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=PHL1 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.2e-06
Identity = 46/161 (28.57%), Postives = 76/161 (47.20%), Query Frame = 0


Query: 117 NDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINCIDQLGGAQRKSERQI-- 176
           N + +  S E+ +   N  S S  TSK RM+WT ELH+ F+  ++QLGG++R + + +  
Sbjct: 206 NQQQQMVSSEDQLSGRN-SSSSVATSKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLK 265

Query: 177 --NKSGL--MHCNQNLVK-------------------------------------QLMEA 235
             N  GL   H   +L K                                     ++ +A
Sbjct: 266 LLNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTSIEDIKSLDMKTSVEITQA 325

[Close]

BLAST of CcUC10G197730 vs. ExPASy Swiss-Prot
Match: Q94CL7 (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=PHR1 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.5e-06
Identity = 46/146 (31.51%), Postives = 65/146 (44.52%), Query Frame = 0


Query: 127 ELMPNDNEKSKSKI-TSKTRMKWTEELHQKFINCIDQLGGAQRKSERQINK----SGL-- 186
           EL P     S S   T K RM+WT ELH+ F+  ++ LGG++R + + + K     GL  
Sbjct: 208 ELRPVSTTSSNSNNGTGKARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTI 267

Query: 187 MHCNQNLVKQ-----------------------------------LMEAVRQQLDTQRSL 231
            H   +L K                                    + EA+R Q++ Q+ L
Sbjct: 268 YHVKSHLQKYRTARYRPEPSETGSPERKLTPLEHITSLDLKGGIGITEALRLQMEVQKQL 327

[Close]

BLAST of CcUC10G197730 vs. ExPASy Swiss-Prot
Match: B8B5N8 (Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. indica OX=39946 GN=PHR2 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.6e-04
Identity = 49/166 (29.52%), Postives = 78/166 (46.99%), Query Frame = 0


Query: 106 AQHQSSYCQEFNDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINCIDQLGG 165
           A HQS+  Q  + +    S    +P+ +  S +   SKTRM+WT ELH++F++ ++ LGG
Sbjct: 211 AVHQSAAQQSVSSQSGEPS-AVAIPSPSGASNTS-NSKTRMRWTPELHERFVDAVNLLGG 270

Query: 166 AQRKSERQINK------SGLMHCNQNLVK------------------------------- 225
           +++ + + + K        + H   +L K                               
Sbjct: 271 SEKATPKGVLKLMKADNLTIYHVKSHLQKYRTARYRPELSEGSSEKKAASKEDIPSIDLK 330

Query: 226 ----QLMEAVRQQLDTQRSLNEQLEIQKNLISDIEEQMKQLTGVLE 231
                L EA+R QL+ Q+ L+EQLEIQ++L   IEEQ K L  +LE
Sbjct: 331 GGNFDLTEALRLQLELQKRLHEQLEIQRSLQLRIEEQGKCLQMMLE 374

[Close]

BLAST of CcUC10G197730 vs. ExPASy TrEMBL
Match: A0A5D3CJQ9 (Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00080 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.1e-55
Identity = 128/210 (60.95%), Postives = 142/210 (67.62%), Query Frame = 0


Query: 40  MNLNMNDYNGFCPLSYLDSPFHDFYAFEGYQTFSETESSFASSNINDHQHHFHISSSSFH 99
           M L MN+YN FCPLSYLDSPFHDFY FEG +TFSE +SSFA SNINDHQHHFHISSSSFH
Sbjct: 1   MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCRTFSEVDSSFAPSNINDHQHHFHISSSSFH 60

Query: 100 SPNHQEAQHQSSYCQEFNDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINC 159
           SPN Q AQHQSS  QEF+ E+ SWS EEL PN N+K KS + SKTR+KWTE+LHQKFINC
Sbjct: 61  SPNPQAAQHQSSCSQEFDGEHCSWSCEELRPNHNKKLKSSMVSKTRIKWTEQLHQKFINC 120

Query: 160 IDQLGGAQR---------------------------------------KSERQINKSGLM 211
           +DQLGGAQ+                                       KSERQINK   M
Sbjct: 121 VDQLGGAQKATPKQLLHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKEPM 180

[Close]

BLAST of CcUC10G197730 vs. ExPASy TrEMBL
Match: A0A5A7U415 (Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00100 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 2.7e-55
Identity = 128/211 (60.66%), Postives = 142/211 (67.30%), Query Frame = 0


Query: 40  MNLNMNDYNGFCPLSYLDSPFHDFYAFEGYQTFSETESSFASSNINDHQHHFHISSSSFH 99
           M L MN+YN FCPLSYLDSPFHDFY FEG +TFSE +SSFA SNINDHQHHFHISSSSFH
Sbjct: 1   MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCRTFSEVDSSFAPSNINDHQHHFHISSSSFH 60

Query: 100 SPNHQEAQHQSSYCQEFNDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINC 159
           SPN Q AQHQSS  QEF+ E+ SWS EEL PN N+K KS + SKTR+KWTE+LHQKFINC
Sbjct: 61  SPNPQAAQHQSSCSQEFDGEHCSWSCEELRPNHNKKLKSSMVSKTRIKWTEQLHQKFINC 120

Query: 160 IDQLGGAQR----------------------------------------KSERQINKSGL 211
           +DQLGGAQ+                                        KSERQINK   
Sbjct: 121 VDQLGGAQKATPKQLLHLMKTKGLTLIHIKSHLQKYRISQQIQELSKAGKSERQINKKEP 180

[Close]

BLAST of CcUC10G197730 vs. ExPASy TrEMBL
Match: A0A6J1F3G0 (myb family transcription factor PHL5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441832 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52
Identity = 136/241 (56.43%), Postives = 155/241 (64.32%), Query Frame = 0


Query: 42  LNMNDYNGFCPLSYLDSPFHDFYAFEGYQTFSETESSFASSNINDHQHHFHISSSSFHSP 101
           L M+D NG C LSYL SP  DFY FEG +TFSE ESSF SSN  D Q H H SS +F S 
Sbjct: 5   LLMSDCNGLCQLSYLGSPLLDFYVFEGCETFSEAESSFVSSNTEDDQPHLHFSSFAFDSS 64

Query: 102 NHQ-EAQHQSSYCQEFNDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINCI 161
            HQ EAQ QSS C EF+ +  SWS+EELM N+N+KSKS+I SK R+KWTEELHQKF+NC+
Sbjct: 65  KHQGEAQEQSSCCHEFSGDC-SWSWEELMGNENKKSKSRIGSKKRIKWTEELHQKFMNCV 124

Query: 162 DQLGGAQR---------------------------------------KSERQINKSGLMH 221
           DQLGG Q+                                       KSER+ +K  LM 
Sbjct: 125 DQLGGTQKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQHIRDFSKGKSERKPDKE-LML 184

Query: 222 CNQNLVKQLMEAVRQQLDTQRSLNEQLEIQKNLISDIEEQMKQLTGVLELRRKPIVFRND 243
            NQN  KQL+EA RQ L TQ SLNEQLE+QKNLIS IEEQMKQL GVLE R KP+VFRN+
Sbjct: 185 ANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQMKQLRGVLERRGKPVVFRNE 243

[Close]

BLAST of CcUC10G197730 vs. ExPASy TrEMBL
Match: A0A6J1DGZ3 (myb family transcription factor PHL5-like OS=Momordica charantia OX=3673 GN=LOC111020349 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 8.5e-49
Identity = 125/242 (51.65%), Postives = 153/242 (63.22%), Query Frame = 0


Query: 44  MNDYNGFCPLSYLDSPFHDFYAFEGYQTFSETE----SSFASSNINDHQHHFHISSSSFH 103
           M+D+NGF PL+   SPF D YAFEGY  FSE E    SSFASS+I D QHH H+ SSSF 
Sbjct: 3   MSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHV-SSSFD 62

Query: 104 SPNHQEAQHQSSYCQEFNDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINC 163
           SP HQ  + QSS CQEFN E+ SW +EEL  N+N K KS + SKTR+KWTEELHQKF++C
Sbjct: 63  SPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKPKSIVVSKTRVKWTEELHQKFVDC 122

Query: 164 IDQLGGAQR---------------------------------------KSERQINKSGLM 223
           +++LGGAQ+                                       KSE++     ++
Sbjct: 123 VNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQKYRISQHTQEFSEGKSEKKTKMKTML 182

Query: 224 HCNQNLVKQLMEAVRQQLDTQRSLNEQLEIQKNLISDIEEQMKQLTGVLELRRKPIVFRN 243
             NQN+  QLME VRQQLDTQ SL+E LE+QKNLIS +EEQMKQL G+L+ RRK  VFR 
Sbjct: 183 QPNQNIGNQLMEVVRQQLDTQSSLHEHLEVQKNLISAMEEQMKQLRGILDHRRKTTVFRT 239

[Close]

BLAST of CcUC10G197730 vs. ExPASy TrEMBL
Match: A0A6J1IWZ7 (myb family transcription factor PHL5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481412 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.0e-46
Identity = 125/230 (54.35%), Postives = 146/230 (63.48%), Query Frame = 0


Query: 53  LSYLDSPFHDFYAFEGYQTFSETESSFASSNINDHQHHFHISSSSFHSPNHQ-EAQHQSS 112
           LSYL SP  DFY FEG +TFSE ESSF SSN  D QHH   SS +F S  HQ EAQ QSS
Sbjct: 20  LSYLGSPLLDFYVFEGCETFSEAESSFVSSNTEDDQHHLPFSSFTFDSSKHQGEAQEQSS 79

Query: 113 YCQEFNDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINCIDQLGGAQRKSE 172
            CQE N +  SWS+EELM N+N+KSKS+I  K R+KWTEELHQKF+NC+DQLGG Q+ + 
Sbjct: 80  CCQELNGDC-SWSWEELMGNENKKSKSRIGWKKRIKWTEELHQKFMNCVDQLGGTQKATP 139

Query: 173 RQI------------------------------NKSG---------LMHCNQNLVKQLME 232
           +Q+                              +K+G         LM  NQN  KQL+E
Sbjct: 140 KQLLHLMKTEGLTLIHIKSHLQKCRISQHIRDFSKAGKPERKTDKELMLANQNRGKQLVE 199

Query: 233 AVRQQLDTQRSLNEQLEIQKNLISDIEEQMKQLTGVLELRRKPIVFRNDE 243
           + RQ L T  SLNEQLE+QKNLIS IEEQMKQL GVLE R K +VFRN+E
Sbjct: 200 SARQLLATHSSLNEQLEVQKNLISAIEEQMKQLRGVLERRGKAVVFRNEE 248

[Close]

BLAST of CcUC10G197730 vs. TAIR 10
Match: AT3G04450.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08
Identity = 46/147 (31.29%), Postives = 69/147 (46.94%), Query Frame = 0


Query: 131 NDNEKSKSKITSKTRMKWTEELHQKFINCIDQLGGAQRKSERQ----INKSGL--MHCNQ 190
           N      S +TSK RM+WT ELH+ F+  I+QLGG++R + +     IN  GL   H   
Sbjct: 226 NAKSPPASSMTSKQRMRWTPELHEAFVEAINQLGGSERATPKAVLKLINSPGLTVYHVKS 285

Query: 191 NLVK-------------------------------------QLMEAVRQQLDTQRSLNEQ 235
           +L K                                     ++ EA+R Q+  Q+ L+EQ
Sbjct: 286 HLQKYRTARYKPELSKDTEEPLVKNLKTIEDIKSLDLKTSIEITEALRLQMKVQKQLHEQ 345

[Close]

BLAST of CcUC10G197730 vs. TAIR 10
Match: AT3G04450.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08
Identity = 46/147 (31.29%), Postives = 69/147 (46.94%), Query Frame = 0


Query: 131 NDNEKSKSKITSKTRMKWTEELHQKFINCIDQLGGAQRKSERQ----INKSGL--MHCNQ 190
           N      S +TSK RM+WT ELH+ F+  I+QLGG++R + +     IN  GL   H   
Sbjct: 186 NAKSPPASSMTSKQRMRWTPELHEAFVEAINQLGGSERATPKAVLKLINSPGLTVYHVKS 245

Query: 191 NLVK-------------------------------------QLMEAVRQQLDTQRSLNEQ 235
           +L K                                     ++ EA+R Q+  Q+ L+EQ
Sbjct: 246 HLQKYRTARYKPELSKDTEEPLVKNLKTIEDIKSLDLKTSIEITEALRLQMKVQKQLHEQ 305

[Close]

BLAST of CcUC10G197730 vs. TAIR 10
Match: AT5G06800.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 55.5 bits (132), Expect = 7.2e-08
Identity = 66/229 (28.82%), Postives = 100/229 (43.67%), Query Frame = 0


Query: 59  PFHDFYAFEGYQ-----TFSETESSFASSNINDHQHH-------FHISSSSFHSPNHQEA 118
           P  D Y    YQ      F+ T +S AS +++    H          S+S+    N   +
Sbjct: 102 PLPDQYMKPLYQRSCSNDFAATNASSASYSLSFEASHDPQELCRRTYSNSNVTHLNFTSS 161

Query: 119 QHQSSYCQEFNDEYRSWSYE--ELMPNDNEKSKSKITSKTRMKWTEELHQKFINCIDQLG 178
           QHQ            S+S     + PN          +KTR++WT++LH+KF+ C+++LG
Sbjct: 162 QHQPKQSHPRFSSPPSFSIHGGSMAPN--------CVNKTRIRWTQDLHEKFVECVNRLG 221

Query: 179 GAQRKSERQINKS------GLMHCNQNLVK------------------------------ 235
           GA + + + I K        + H   +L K                              
Sbjct: 222 GADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAKYMPESQEGKFEKRACAKELSQLDTR 281

[Close]

BLAST of CcUC10G197730 vs. TAIR 10
Match: AT5G29000.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-07
Identity = 46/161 (28.57%), Postives = 76/161 (47.20%), Query Frame = 0


Query: 117 NDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINCIDQLGGAQRKSERQI-- 176
           N + +  S E+ +   N  S S  TSK RM+WT ELH+ F+  ++QLGG++R + + +  
Sbjct: 163 NQQQQMVSSEDQLSGRN-SSSSVATSKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLK 222

Query: 177 --NKSGL--MHCNQNLVK-------------------------------------QLMEA 235
             N  GL   H   +L K                                     ++ +A
Sbjct: 223 LLNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTSIEDIKSLDMKTSVEITQA 282

[Close]

BLAST of CcUC10G197730 vs. TAIR 10
Match: AT5G29000.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-07
Identity = 46/161 (28.57%), Postives = 76/161 (47.20%), Query Frame = 0


Query: 117 NDEYRSWSYEELMPNDNEKSKSKITSKTRMKWTEELHQKFINCIDQLGGAQRKSERQI-- 176
           N + +  S E+ +   N  S S  TSK RM+WT ELH+ F+  ++QLGG++R + + +  
Sbjct: 206 NQQQQMVSSEDQLSGRN-SSSSVATSKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLK 265

Query: 177 --NKSGL--MHCNQNLVK-------------------------------------QLMEA 235
             N  GL   H   +L K                                     ++ +A
Sbjct: 266 LLNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTSIEDIKSLDMKTSVEITQA 325

The following BLAST results are available for this feature:

BLAST of CcUC10G197730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652834.2	3.3e-71	60.97	myb family transcription factor PHL5 [Cucumis sativus]	[more]
XP_038904770.1	1.2e-68	65.56	myb family transcription factor PHL5-like isoform X2 [Benincasa hispida]	[more]
XP_038904769.1	1.5e-68	65.29	myb family transcription factor PHL5-like isoform X1 [Benincasa hispida]	[more]
KAE8650941.1	1.3e-56	60.87	hypothetical protein Csa_001106 [Cucumis sativus]	[more]
TYK10646.1	4.3e-55	60.95	protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]	[more]

BLAST of CcUC10G197730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J3P7	1.6e-07	31.29	Myb family transcription factor PHL13 OS=Arabidopsis thaliana OX=3702 GN=PHL13 P...	[more]
Q0WVU3	1.0e-06	28.82	Myb family transcription factor PHL5 OS=Arabidopsis thaliana OX=3702 GN=PHL5 PE=...	[more]
Q8GUN5	2.2e-06	28.57	Protein PHR1-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=PHL1 PE=1 SV=1	[more]
Q94CL7	6.5e-06	31.51	Protein PHOSPHATE STARVATION RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=PHR1 ...	[more]
B8B5N8	1.6e-04	29.52	Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. indica OX=39946 G...	[more]

BLAST of CcUC10G197730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJQ9	2.1e-55	60.95	Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7U415	2.7e-55	60.66	Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A6J1F3G0	1.6e-52	56.43	myb family transcription factor PHL5-like isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1DGZ3	8.5e-49	51.65	myb family transcription factor PHL5-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1IWZ7	1.0e-46	54.35	myb family transcription factor PHL5-like isoform X1 OS=Cucurbita maxima OX=3661...	[more]

BLAST of CcUC10G197730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04450.1	1.1e-08	31.29	Homeodomain-like superfamily protein	[more]
AT3G04450.2	1.1e-08	31.29	Homeodomain-like superfamily protein	[more]
AT5G06800.1	7.2e-08	28.82	myb-like HTH transcriptional regulator family protein	[more]
AT5G29000.1	1.6e-07	28.57	Homeodomain-like superfamily protein	[more]
AT5G29000.2	1.6e-07	28.57	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 191..228
None	No IPR available	GENE3D	1.10.10.60		coord: 142..208 e-value: 1.7E-7 score: 33.2
None	No IPR available	PANTHER	PTHR31314:SF7	MYB FAMILY TRANSCRIPTION FACTOR PHL5	coord: 57..230
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 189..231 e-value: 3.1E-9 score: 36.4
IPR044848	PHR1-like	PANTHER	PTHR31314	MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE	coord: 57..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G197730.1	CcUC10G197730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity