CcUC10G197170 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G197170
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Hydroxymethylbilane synthase
Location	CicolChr10: 23728280 .. 23731553 (-)
RNA-Seq Expression	CcUC10G197170
Synteny	CcUC10G197170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTTTGCAAATCGAATTGAAATGGATGAGAATCCTATCCGCCAACGCGAATGCAGACATTTGCCCTGTTGAGTCATCGAAAACAATCGCTTCTAAGCTAACCCATTTCCCCTTTTTTCCTTCTTATTCTTCTTCTTCTTCTTCTTCTCAATCTCAAACAAACACTCTCTCAAATGGGTGTTTTATCTTCCCCTTCTGTAAGCCACTCTTCAACGCCTCGCCCTTGTAATGTTACCTCCCTTTCTTTTCTTGGGTTCTCTTCACTTTCCCTTAAACCTCCGGCTTTCTCTAATGGCGCCAAGAAATTTCATGGGTTTGGCCTCATAAGAGCCTCTGTTGCTGTGGAGCAGCAGACAGAGAAGACCAAGGTCGCTCTCGTCAGAATTGGCACCAGAGGAAGGTAACTTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTGTGGGTCTTTTTTTAGATTCGTTTAATGGTTTTGGGTTGTCTTTAGTTTCTAAGTTTGAGTTTCTGGCTGATTTGAGTTTGATAATGTAGGGGATTGGGTTACTGTTGAAAGGTTTGGGTCAGTTCAATTTGTGTCTTTCAACTGTGATCTAATTTTGGTGTATTGTGGAATTGTGAAGAAGTCCAGTATGTTTCTCATGTTTGTACTTGAATCTGTCAAAACTTGTATGTTCACTCTTGTTCAAATGAAGTTGGATGGAAGTTGCATTTTTGTGTAGTAAATCAGATTATGAAGAATGCTAAAGGGTGGAAAATGAACCAAATCAAAGAAATAAATAGATTCCTAAGGACTAACAATTGTGGAGAACTCTCCCCTCCTTACTTTTAGGTGCTTGTCTTCTGAATTGATTAAATTCATATAAAGTATTCATGTTGGTCATGCCATCAATGCTAGGATCCAATCTGCTGCTGCTAGAGTAGAATGAGTTCTTTATAAGAAGAGTAAGTCTAAGAGGGGCTTCAAATTCAAAGGTTTCATGTTTCTCTTTAGACTTCAAATTTGAAGTTACGTCTTTTTTGCGACTTTTCTATTGGTACTATTTTGCTTGGTCCCCTTGTTTTTAGAGGGGCTCTTTTTGTGGGTTTGGTTTTTTGTATGCCTTTATATTCTTCCCGGCAATTCTAATTTGGTAGGAATTAAGGGGTATGTAGTTTTCTTAACAAAACGGGGAACTATGTCTATAAACATAGTCTACATCATTTTCTATATGCTTGTTTGATCTAAATCTCGTATTGGGTTGCTTTATCTTCTACTGTGTCATATATAATTTCTGCATGTAGGACAGCCCATTAGCTCTTGCCCAGGCTCATGAGACGAGAGACAAACTCATGGCTTCCCATCCCGAGCTAGCCGAAGATGGGGCCATTCAGATTGTTGTAATCAAAACAACTGGTGACAAAATACTCTCTCAGCCACTTGCAGACATTGGTGGGAAAGGCTTATTTACTAAAGAGATTGATGATGCACTTATTAATGGTGACATCGACATTGCTGTTCACTCAATGAAAGATGTACCAACTTACTTACCCGAGAAAACCATCCTCCCGTGTAATCTTCCAAGAGAGGATGTCCGTGATGCCTTCATTTCTCTAAGTGCAGGTTCACTTGCTGAGCTTACAGCTGGAAGCATCATCGGTACAGCTTCACTGAGAAGAAAGTCTCAGCTACTGAATAGATATCCATCGCTCAAAGTAAGAATGCTGTGTTATTTAATGGAAAATCGTCCAAAATGTTTATGTTCTACGTTTACATCGCTACAACAGTTAATAGATTGTTGATCTCAGCTGATGTGTGAATTAGGCTCCTAGAAAACACGATAGAAGGAATGTTTCTTTGGTTTTCTTTCTAAATTGGTTGATCTTTAAAACCTTGACTATATTGCTGTTGTCTATGTTCTCTTAACAAATTCCAACTTTTTCCTTCTTATTCATTGCTATTACAATGGGGTGTCACATTGTTTGACGACGATCGGTTATTTTCTCATACGAGATTGGAAGATTCCCTGCTTCTCCCACCTGTTCTTTCTTTAAATTTAAAATTCTTGACTTTGATAGAACATTTATGACTATGATTTAAGGATATTCAAAGAGTCTTAAATTTTCAATCTTAGAGATTGGTTCTGACACTCTGTTGTTTTTTCCATTGTTGGTTGGTGTCATTTGTCAGGTGCTGGAGAATTTTCGGGGCAATGTCCAAACAAGGTTGAGAAAACTGAATGAAGGTGTGGTCCAAGCAACACTGTTGGCTCTGGCTGGACTTCGGCGTTTAAATATGACAGAAAATGTTACTTCGATCCTTTCAATCGATGAAATGCTTCCAGCTGTTGCTCAGGGAGCTATTGGGATTGCCTGTCGAAGTGACGATGACATAATGGTGTGTTTTCATTAGCTATGGAAATTGATACTCCCCCATGATCTTTTAACAATTTCCATTATAACTATATCTTCTTGAGAAAACCATCGATTCTACTCAAATGGCTGACTTATCTTATCTCCGTATACCATTTAAAGTCATTGCTTGGAGAAATGCTTAATGTCTTTCCTGTTTGGTTTCTGATTGTGCAGGCCAATTACTTAGCCTCATTAAACCACGAGGAAACAAGACTGGCTGTAGTTTGTGAGAGAGCTTTCCTTGAGACTCTGGATGGATCTTGCCGAACTCCGATTGCAGGATATGCTTCCAGAGATGAAGATGGCAATTGTATATTTAAAGGGTTGGTGGCTTCCCCAGACGGAACCCGAGGTAATACGATCAGTAGATGAAATAACTTCTACTCTTATTTTCATTAGCTTCTTCTCTTCATTGCTAGAACATTGATTATCATCATCTTTTAATTATCACCTTTGTTTCTTCCCTTTTCATTTCAGTTCTTGAAACTTCTCGACGAGGTCCATATGCCATTGACGATATGATTGCAATGGGAAAGGATGCTGGCAAGGAGCTTCTTTCTCGAGCAGGTCCCGGTTTTTTTGATAGCTAGTTAGTTTACCTTAGAATTTAGGACAAGGCCAGTGAGAAAAGATCAAGGCTTCATATCCAAATTTTCAAGTGAGTAGGAGTTTTATTCATCCTTTGAGTTGAAGCTTGTTGTATTTTAAATATGGATTTTCTTTTCCCACTCCTTTGGTTTCTTAGTTGGTAGTGTAAATTAGAACAGAAATCATTTAGACTATATGGCTTCCCCCAAATAATCAATACAATTTGCCCCTTATCTGTGTGCTTTCAATATTGCTTCATTATCGTTTTTTTCAATGTGAGAAAAGATTGTATGAG

mRNA sequence

TCTTTTTGCAAATCGAATTGAAATGGATGAGAATCCTATCCGCCAACGCGAATGCAGACATTTGCCCTGTTGAGTCATCGAAAACAATCGCTTCTAAGCTAACCCATTTCCCCTTTTTTCCTTCTTATTCTTCTTCTTCTTCTTCTTCTCAATCTCAAACAAACACTCTCTCAAATGGGTGTTTTATCTTCCCCTTCTGTAAGCCACTCTTCAACGCCTCGCCCTTGTAATGTTACCTCCCTTTCTTTTCTTGGGTTCTCTTCACTTTCCCTTAAACCTCCGGCTTTCTCTAATGGCGCCAAGAAATTTCATGGGTTTGGCCTCATAAGAGCCTCTGTTGCTGTGGAGCAGCAGACAGAGAAGACCAAGGTCGCTCTCGTCAGAATTGGCACCAGAGGAAGAAGTCCAGTATGTTTCTCATGTTTGTACTTGAATCTGTCAAAACTTGACAGCCCATTAGCTCTTGCCCAGGCTCATGAGACGAGAGACAAACTCATGGCTTCCCATCCCGAGCTAGCCGAAGATGGGGCCATTCAGATTGTTGTAATCAAAACAACTGGTGACAAAATACTCTCTCAGCCACTTGCAGACATTGGTGGGAAAGGCTTATTTACTAAAGAGATTGATGATGCACTTATTAATGGTGACATCGACATTGCTGTTCACTCAATGAAAGATGTACCAACTTACTTACCCGAGAAAACCATCCTCCCGTGTAATCTTCCAAGAGAGGATGTCCGTGATGCCTTCATTTCTCTAAGTGCAGGTTCACTTGCTGAGCTTACAGCTGGAAGCATCATCGGTACAGCTTCACTGAGAAGAAAGTCTCAGCTACTGAATAGATATCCATCGCTCAAAGTGCTGGAGAATTTTCGGGGCAATGTCCAAACAAGGTTGAGAAAACTGAATGAAGGTGTGGTCCAAGCAACACTGTTGGCTCTGGCTGGACTTCGGCGTTTAAATATGACAGAAAATGTTACTTCGATCCTTTCAATCGATGAAATGCTTCCAGCTGTTGCTCAGGGAGCTATTGGGATTGCCTGTCGAAGTGACGATGACATAATGGCCAATTACTTAGCCTCATTAAACCACGAGGAAACAAGACTGGCTGTAGTTTGTGAGAGAGCTTTCCTTGAGACTCTGGATGGATCTTGCCGAACTCCGATTGCAGGATATGCTTCCAGAGATGAAGATGGCAATTGTATATTTAAAGGGTTGGTGGCTTCCCCAGACGGAACCCGAGTTCTTGAAACTTCTCGACGAGGTCCATATGCCATTGACGATATGATTGCAATGGGAAAGGATGCTGGCAAGGAGCTTCTTTCTCGAGCAGGTCCCGGTTTTTTTGATAGCTAGTTAGTTTACCTTAGAATTTAGGACAAGGCCAGTGAGAAAAGATCAAGGCTTCATATCCAAATTTTCAAGTGAGTAGGAGTTTTATTCATCCTTTGAGTTGAAGCTTGTTGTATTTTAAATATGGATTTTCTTTTCCCACTCCTTTGGTTTCTTAGTTGGTAGTGTAAATTAGAACAGAAATCATTTAGACTATATGGCTTCCCCCAAATAATCAATACAATTTGCCCCTTATCTGTGTGCTTTCAATATTGCTTCATTATCGTTTTTTTCAATGTGAGAAAAGATTGTATGAG

Coding sequence (CDS)

ATGGGTGTTTTATCTTCCCCTTCTGTAAGCCACTCTTCAACGCCTCGCCCTTGTAATGTTACCTCCCTTTCTTTTCTTGGGTTCTCTTCACTTTCCCTTAAACCTCCGGCTTTCTCTAATGGCGCCAAGAAATTTCATGGGTTTGGCCTCATAAGAGCCTCTGTTGCTGTGGAGCAGCAGACAGAGAAGACCAAGGTCGCTCTCGTCAGAATTGGCACCAGAGGAAGAAGTCCAGTATGTTTCTCATGTTTGTACTTGAATCTGTCAAAACTTGACAGCCCATTAGCTCTTGCCCAGGCTCATGAGACGAGAGACAAACTCATGGCTTCCCATCCCGAGCTAGCCGAAGATGGGGCCATTCAGATTGTTGTAATCAAAACAACTGGTGACAAAATACTCTCTCAGCCACTTGCAGACATTGGTGGGAAAGGCTTATTTACTAAAGAGATTGATGATGCACTTATTAATGGTGACATCGACATTGCTGTTCACTCAATGAAAGATGTACCAACTTACTTACCCGAGAAAACCATCCTCCCGTGTAATCTTCCAAGAGAGGATGTCCGTGATGCCTTCATTTCTCTAAGTGCAGGTTCACTTGCTGAGCTTACAGCTGGAAGCATCATCGGTACAGCTTCACTGAGAAGAAAGTCTCAGCTACTGAATAGATATCCATCGCTCAAAGTGCTGGAGAATTTTCGGGGCAATGTCCAAACAAGGTTGAGAAAACTGAATGAAGGTGTGGTCCAAGCAACACTGTTGGCTCTGGCTGGACTTCGGCGTTTAAATATGACAGAAAATGTTACTTCGATCCTTTCAATCGATGAAATGCTTCCAGCTGTTGCTCAGGGAGCTATTGGGATTGCCTGTCGAAGTGACGATGACATAATGGCCAATTACTTAGCCTCATTAAACCACGAGGAAACAAGACTGGCTGTAGTTTGTGAGAGAGCTTTCCTTGAGACTCTGGATGGATCTTGCCGAACTCCGATTGCAGGATATGCTTCCAGAGATGAAGATGGCAATTGTATATTTAAAGGGTTGGTGGCTTCCCCAGACGGAACCCGAGTTCTTGAAACTTCTCGACGAGGTCCATATGCCATTGACGATATGATTGCAATGGGAAAGGATGCTGGCAAGGAGCTTCTTTCTCGAGCAGGTCCCGGTTTTTTTGATAGCTAG

Protein sequence

MGVLSSPSVSHSSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQTEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAIQIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANYLASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLETSRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS

Homology

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BLAST of CcUC10G197170 vs. NCBI nr
Match: XP_038906286.1 (porphobilinogen deaminase, chloroplastic [Benincasa hispida])

HSP 1 Score: 698.7 bits (1802), Expect = 2.8e-197
Identity = 368/393 (93.64%), Postives = 369/393 (93.89%), Query Frame = 0


Query: 1   MGVLSSPSVSHSSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ 60
           MGVLSSPSVSHS  PRP NV SLS LGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ
Sbjct: 1   MGVLSSPSVSHSPMPRPRNVGSLSLLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ 60

Query: 61  TEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAI 120
           TEKTKVALVRIGTRG                 SPLALAQAHETRDKLMASHPELAEDGAI
Sbjct: 61  TEKTKVALVRIGTRG-----------------SPLALAQAHETRDKLMASHPELAEDGAI 120

Query: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180
           QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP
Sbjct: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180

Query: 181 CNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240
           CNLPREDVRDAFISLSAGSLAEL AGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR
Sbjct: 181 CNLPREDVRDAFISLSAGSLAELPAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240

Query: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 300
           LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACR+DDD MANY
Sbjct: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRTDDDKMANY 300

Query: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360
           LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET
Sbjct: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360

Query: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 394
           SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS
Sbjct: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 376

[Close]

BLAST of CcUC10G197170 vs. NCBI nr
Match: KGN58748.2 (hypothetical protein Csa_002701 [Cucumis sativus])

HSP 1 Score: 689.9 bits (1779), Expect = 1.3e-194
Identity = 363/393 (92.37%), Postives = 366/393 (93.13%), Query Frame = 0


Query: 1   MGVLSSPSVSHSSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ 60
           MGVLSSPSVSHS  PRPCNV SLSFLGFSSLSLKPP FSNGAKKFHG GLIRA VA EQQ
Sbjct: 57  MGVLSSPSVSHSPMPRPCNVGSLSFLGFSSLSLKPPTFSNGAKKFHGVGLIRA-VAAEQQ 116

Query: 61  TEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAI 120
            EKTKVAL+RIGTRG                 SPLALAQAHETRDKLMASHPELAEDGAI
Sbjct: 117 VEKTKVALLRIGTRG-----------------SPLALAQAHETRDKLMASHPELAEDGAI 176

Query: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180
           QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP
Sbjct: 177 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 236

Query: 181 CNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240
           CNLPREDVRDAFISLSAGS AEL AGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR
Sbjct: 237 CNLPREDVRDAFISLSAGSFAELPAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 296

Query: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 300
           LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY
Sbjct: 297 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 356

Query: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360
           LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET
Sbjct: 357 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 416

Query: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 394
           SRRGPYAI+DMIAMGKDAG+ELLSRAGPGFFDS
Sbjct: 417 SRRGPYAIEDMIAMGKDAGQELLSRAGPGFFDS 431

[Close]

BLAST of CcUC10G197170 vs. NCBI nr
Match: XP_004149732.1 (porphobilinogen deaminase, chloroplastic [Cucumis sativus])

HSP 1 Score: 689.9 bits (1779), Expect = 1.3e-194
Identity = 363/393 (92.37%), Postives = 366/393 (93.13%), Query Frame = 0


Query: 1   MGVLSSPSVSHSSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ 60
           MGVLSSPSVSHS  PRPCNV SLSFLGFSSLSLKPP FSNGAKKFHG GLIRA VA EQQ
Sbjct: 1   MGVLSSPSVSHSPMPRPCNVGSLSFLGFSSLSLKPPTFSNGAKKFHGVGLIRA-VAAEQQ 60

Query: 61  TEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAI 120
            EKTKVAL+RIGTRG                 SPLALAQAHETRDKLMASHPELAEDGAI
Sbjct: 61  VEKTKVALLRIGTRG-----------------SPLALAQAHETRDKLMASHPELAEDGAI 120

Query: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180
           QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP
Sbjct: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180

Query: 181 CNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240
           CNLPREDVRDAFISLSAGS AEL AGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR
Sbjct: 181 CNLPREDVRDAFISLSAGSFAELPAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240

Query: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 300
           LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY
Sbjct: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 300

Query: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360
           LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET
Sbjct: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360

Query: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 394
           SRRGPYAI+DMIAMGKDAG+ELLSRAGPGFFDS
Sbjct: 361 SRRGPYAIEDMIAMGKDAGQELLSRAGPGFFDS 375

[Close]

BLAST of CcUC10G197170 vs. NCBI nr
Match: XP_023523547.1 (porphobilinogen deaminase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 677.6 bits (1747), Expect = 6.6e-191
Identity = 355/393 (90.33%), Postives = 360/393 (91.60%), Query Frame = 0


Query: 1   MGVLSSPSVSHSSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ 60
           MGV SSPS+SH    RPCN+ SLS  GFSSLSLKPPAFS GAKKFHGFGLIRASVAVEQQ
Sbjct: 18  MGVFSSPSISHYPMARPCNLGSLSRHGFSSLSLKPPAFSTGAKKFHGFGLIRASVAVEQQ 77

Query: 61  TEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAI 120
            EKTKVALVRIGTRG                 SPLALAQAHETR+KLMA HPELAEDGAI
Sbjct: 78  AEKTKVALVRIGTRG-----------------SPLALAQAHETREKLMAIHPELAEDGAI 137

Query: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180
           QIV+IKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP
Sbjct: 138 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 197

Query: 181 CNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240
           CNLPREDVRDAFISLS GSLAEL AGS+IGTASLRRKSQLLNRYPSL VLENFRGNVQTR
Sbjct: 198 CNLPREDVRDAFISLSVGSLAELPAGSVIGTASLRRKSQLLNRYPSLNVLENFRGNVQTR 257

Query: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 300
           LRKLNEGVVQATLLALAGLRRLNMTE VTSILSIDEMLPAVAQGAIGIACRSDDD MANY
Sbjct: 258 LRKLNEGVVQATLLALAGLRRLNMTETVTSILSIDEMLPAVAQGAIGIACRSDDDKMANY 317

Query: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360
           LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET
Sbjct: 318 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 377

Query: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 394
           SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS
Sbjct: 378 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 393

[Close]

BLAST of CcUC10G197170 vs. NCBI nr
Match: XP_022949290.1 (porphobilinogen deaminase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 676.0 bits (1743), Expect = 1.9e-190
Identity = 354/393 (90.08%), Postives = 359/393 (91.35%), Query Frame = 0


Query: 1   MGVLSSPSVSHSSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ 60
           MGV SSPS+SH    RPCN+ SLS  GFSSLSLKPPAFS G KKFHGFGLIRASVAVEQQ
Sbjct: 1   MGVFSSPSISHYPMARPCNLGSLSRHGFSSLSLKPPAFSTGGKKFHGFGLIRASVAVEQQ 60

Query: 61  TEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAI 120
            EKTKVALVRIGTRG                 SPLALAQAHETR+KLMA HPELAEDGAI
Sbjct: 61  AEKTKVALVRIGTRG-----------------SPLALAQAHETREKLMAIHPELAEDGAI 120

Query: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180
           QIV+IKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP
Sbjct: 121 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180

Query: 181 CNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240
           CNLPREDVRDAFISLS GSLAEL AGS+IGTASLRRKSQLLNRYPSL VLENFRGNVQTR
Sbjct: 181 CNLPREDVRDAFISLSVGSLAELPAGSVIGTASLRRKSQLLNRYPSLNVLENFRGNVQTR 240

Query: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 300
           LRKLNEGVVQATLLALAGLRRLNMTE VTSILSIDEMLPAVAQGAIGIACRSDDD MANY
Sbjct: 241 LRKLNEGVVQATLLALAGLRRLNMTETVTSILSIDEMLPAVAQGAIGIACRSDDDKMANY 300

Query: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360
           LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET
Sbjct: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360

Query: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 394
           SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS
Sbjct: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 376

[Close]

BLAST of CcUC10G197170 vs. ExPASy Swiss-Prot
Match: Q43082 (Porphobilinogen deaminase, chloroplastic OS=Pisum sativum OX=3888 GN=HEMC PE=1 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 1.0e-154
Identity = 296/393 (75.32%), Postives = 326/393 (82.95%), Query Frame = 0


Query: 1   MGVLSSPSVSHSSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ 60
           M + SS S S  S P   ++ SL    F   S K   FS           IRAS+AVEQQ
Sbjct: 3   MTLYSSSSFSLPSAPSNPSL-SLFTSSFRFSSFKTSPFSKCR--------IRASLAVEQQ 62

Query: 61  TEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAI 120
           T++ K AL+RIGTRG                 SPLALAQAHETRDKLMASH ELAE+GAI
Sbjct: 63  TQQNKTALIRIGTRG-----------------SPLALAQAHETRDKLMASHTELAEEGAI 122

Query: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180
           QIV+IKTTGDKILSQPLADIGGKGLFTKEID+ALINGDIDIAVHSMKDVPTYLPE+TILP
Sbjct: 123 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGDIDIAVHSMKDVPTYLPEETILP 182

Query: 181 CNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240
           CNLPREDVRDAFISLSA SLA+L AGS+IGTASLRRKSQ+L+RYPSL V +NFRGNVQTR
Sbjct: 183 CNLPREDVRDAFISLSAASLADLPAGSVIGTASLRRKSQILHRYPSLTVQDNFRGNVQTR 242

Query: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 300
           LRKL+EGVV+ATLLALAGL+RLNMTENVTS LSID+MLPAVAQGAIGIACRS+DD MA Y
Sbjct: 243 LRKLSEGVVKATLLALAGLKRLNMTENVTSTLSIDDMLPAVAQGAIGIACRSNDDKMAEY 302

Query: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360
           LASLNHEETRLA+ CERAFL TLDGSCRTPIAGYASRD+DGNC+F+GLVASPDGTRVLET
Sbjct: 303 LASLNHEETRLAISCERAFLTTLDGSCRTPIAGYASRDKDGNCLFRGLVASPDGTRVLET 362

Query: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 394
           SR G Y  +DM+ +GKDAG+ELLSRAGPGFF+S
Sbjct: 363 SRIGSYTYEDMMKIGKDAGEELLSRAGPGFFNS 369

[Close]

BLAST of CcUC10G197170 vs. ExPASy Swiss-Prot
Match: Q43316 (Porphobilinogen deaminase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HEMC PE=1 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 2.4e-151
Identity = 278/380 (73.16%), Postives = 314/380 (82.63%), Query Frame = 0


Query: 12  SSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQTEKTKVALVRI 71
           SS    C++ S+S +GFS   +  PA     +K    G ++A VAVEQ   KT+ A++RI
Sbjct: 21  SSRVNTCSLGSVSAIGFSLPQISSPALGKCRRKQSSSGFVKACVAVEQ---KTRTAIIRI 80

Query: 72  GTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAIQIVVIKTTGDK 131
           GTRG                 SPLALAQA+ETR+KL   HPEL EDGAI I +IKTTGDK
Sbjct: 81  GTRG-----------------SPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDK 140

Query: 132 ILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDA 191
           ILSQPLADIGGKGLFTKEID+ALING IDIAVHSMKDVPTYLPEKTILPCNLPREDVRDA
Sbjct: 141 ILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDA 200

Query: 192 FISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGVVQA 251
           FI L+A +LAEL AGS++GTASLRRKSQ+L++YP+L V ENFRGNVQTRL KL  G VQA
Sbjct: 201 FICLTAATLAELPAGSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQA 260

Query: 252 TLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANYLASLNHEETRL 311
           TLLALAGL+RL+MTENV SILS+DEMLPAVAQGAIGIACR+DDD MA YLASLNHEETRL
Sbjct: 261 TLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRL 320

Query: 312 AVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLETSRRGPYAIDDM 371
           A+ CERAFLETLDGSCRTPIAGYAS+DE+GNCIF+GLVASPDGT+VLETSR+GPY  +DM
Sbjct: 321 AISCERAFLETLDGSCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDM 380

Query: 372 IAMGKDAGKELLSRAGPGFF 392
           + MGKDAG+ELLSRAGPGFF
Sbjct: 381 VKMGKDAGQELLSRAGPGFF 380

[Close]

BLAST of CcUC10G197170 vs. ExPASy Swiss-Prot
Match: Q6H6D2 (Porphobilinogen deaminase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HEMC PE=2 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 5.7e-137
Identity = 251/343 (73.18%), Postives = 286/343 (83.38%), Query Frame = 0


Query: 51  IRASVAVEQQTEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMAS 110
           +RA+VAV+ + +  KV+L+RIGTRG                 SPLALAQAHETRDKL A+
Sbjct: 33  VRAAVAVQAEAQ-AKVSLIRIGTRG-----------------SPLALAQAHETRDKLKAA 92

Query: 111 HPELAEDGAIQIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVP 170
           H ELAE+GA++IV+IKTTGD IL +PLADIGGKGLFTKEIDDAL+ G IDIAVHSMKDVP
Sbjct: 93  HSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGLFTKEIDDALLQGRIDIAVHSMKDVP 152

Query: 171 TYLPEKTILPCNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVL 230
           TYLPE TILPCNLPREDVRDAFI L+A SLAEL AGS++G+ASLRR+SQ+L +YPSLKV+
Sbjct: 153 TYLPEGTILPCNLPREDVRDAFICLTASSLAELPAGSVVGSASLRRQSQILYKYPSLKVV 212

Query: 231 ENFRGNVQTRLRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIAC 290
            NFRGNVQTRLRKL EG V ATLLALAGL+RLNM E  TS+LS+DEMLPAVAQGAIGIAC
Sbjct: 213 -NFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAETATSVLSVDEMLPAVAQGAIGIAC 272

Query: 291 RSDDDIMANYLASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVA 350
           RS DD M NYL+SLNHE+TRLAV CER FL  LDG+CRTPIA YASRD+DGNC F+GL+A
Sbjct: 273 RSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGNCRTPIAAYASRDKDGNCSFRGLLA 332

Query: 351 SPDGTRVLETSRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 394
           SPDG+ V ETSR GPY  D M+ MGKDAG EL ++AGPGFFDS
Sbjct: 333 SPDGSTVYETSRTGPYDFDIMVEMGKDAGHELKAKAGPGFFDS 356

[Close]

BLAST of CcUC10G197170 vs. ExPASy Swiss-Prot
Match: A1B853 (Porphobilinogen deaminase OS=Paracoccus denitrificans (strain Pd 1222) OX=318586 GN=hemC PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.0e-81
Identity = 173/324 (53.40%), Postives = 219/324 (67.59%), Query Frame = 0


Query: 69  VRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAIQIVVIKTT 128
           +RIGTRG                 S LALAQAHETRD+LMA+H  LA D A +IVVIKTT
Sbjct: 11  IRIGTRG-----------------SALALAQAHETRDRLMAAH-GLAAD-AFRIVVIKTT 70

Query: 129 GDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDV 188
           GD++L +PL +IGGKGLFT+EI+DAL+  +IDIAVHSMKD+PT  PE  ++ C LPREDV
Sbjct: 71  GDRVLDRPLKEIGGKGLFTREIEDALLAHEIDIAVHSMKDMPTIQPEGLVIDCYLPREDV 130

Query: 189 RDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGV 248
           RDAF+S    +++EL  G+++G++SLRR++QL  R P LK++E FRGNVQTRL+KL +GV
Sbjct: 131 RDAFVSAQFAAISELPQGAVVGSSSLRRRAQLAARRPDLKLVE-FRGNVQTRLKKLEDGV 190

Query: 249 VQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANYLASLNHEE 308
             AT LA+AGL RL M       +  DEMLPAVAQG IG+  R+DD   A+ LA+++  +
Sbjct: 191 AVATFLAMAGLTRLGMLHVARGAVEPDEMLPAVAQGCIGVERRADDARTASLLAAISDRD 250

Query: 309 TRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLETSRRGPYAI 368
           + L V  ERAFL  LDGSC+TPIAG A    D     +G +  PDG+ V+   R GP A 
Sbjct: 251 SALRVTAERAFLARLDGSCQTPIAGLAELQGD-RLRLRGEILRPDGSEVIAAERVGPAA- 310

Query: 369 DDMIAMGKDAGKELLSRAGPGFFD 393
            D  AMG D  +EL  RA   FFD
Sbjct: 311 -DGAAMGTDLAEELRGRAPADFFD 311

[Close]

BLAST of CcUC10G197170 vs. ExPASy Swiss-Prot
Match: Q3SVF3 (Porphobilinogen deaminase OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=hemC PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.9e-80
Identity = 174/333 (52.25%), Postives = 215/333 (64.56%), Query Frame = 0


Query: 59  QQTEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDG 118
           Q +++T + L  IGTRG                 SPLALAQAHE RD+L  +H    E  
Sbjct: 2   QSSDETDI-LATIGTRG-----------------SPLALAQAHEVRDRLARAHQVAPE-- 61

Query: 119 AIQIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTI 178
            I I  I+T+GD I  +PL D+GGKGLFTKEI++AL+ G ID AVHS KDVPT+LP+ T 
Sbjct: 62  RIAIKTIRTSGDAIQDRPLFDVGGKGLFTKEIEEALLAGTIDFAVHSSKDVPTFLPDATW 121

Query: 179 LPCNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQ 238
           LP  LPREDVRD FIS  AGSL +L AG+ +GTASLRR++ +L   P LKV  + RGNV+
Sbjct: 122 LPAFLPREDVRDVFISPHAGSLNDLPAGATVGTASLRRQAMVLKLRPDLKV-NSLRGNVE 181

Query: 239 TRLRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMA 298
           TRLRK++ G   ATLLALAGL RL + +  T IL  DE LPAV QGAI I  R DDD + 
Sbjct: 182 TRLRKISVGEADATLLALAGLNRLGLQDKATRILETDEFLPAVGQGAIAIESRRDDDRIN 241

Query: 299 NYLASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVL 358
            ++ ++   ET +A+  ER+FL  LDGSCRTPI G+   + D    F+GL+ SPDGT   
Sbjct: 242 AFVKAIGDPETEVALSAERSFLALLDGSCRTPIGGHCRVNGD-RIDFRGLIISPDGTEFY 301

Query: 359 ETSRRGPYAIDDMIAMGKDAGKELLSRAGPGFF 392
           ET+R G  A  D  A+G DA  EL  RAG  FF
Sbjct: 302 ETTREGARA--DAAALGADAAHELRERAGEKFF 310

[Close]

BLAST of CcUC10G197170 vs. ExPASy TrEMBL
Match: A0A6J1GCC7 (Hydroxymethylbilane synthase OS=Cucurbita moschata OX=3662 GN=LOC111452689 PE=3 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 9.4e-191
Identity = 354/393 (90.08%), Postives = 359/393 (91.35%), Query Frame = 0


Query: 1   MGVLSSPSVSHSSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ 60
           MGV SSPS+SH    RPCN+ SLS  GFSSLSLKPPAFS G KKFHGFGLIRASVAVEQQ
Sbjct: 1   MGVFSSPSISHYPMARPCNLGSLSRHGFSSLSLKPPAFSTGGKKFHGFGLIRASVAVEQQ 60

Query: 61  TEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAI 120
            EKTKVALVRIGTRG                 SPLALAQAHETR+KLMA HPELAEDGAI
Sbjct: 61  AEKTKVALVRIGTRG-----------------SPLALAQAHETREKLMAIHPELAEDGAI 120

Query: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180
           QIV+IKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP
Sbjct: 121 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180

Query: 181 CNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240
           CNLPREDVRDAFISLS GSLAEL AGS+IGTASLRRKSQLLNRYPSL VLENFRGNVQTR
Sbjct: 181 CNLPREDVRDAFISLSVGSLAELPAGSVIGTASLRRKSQLLNRYPSLNVLENFRGNVQTR 240

Query: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 300
           LRKLNEGVVQATLLALAGLRRLNMTE VTSILSIDEMLPAVAQGAIGIACRSDDD MANY
Sbjct: 241 LRKLNEGVVQATLLALAGLRRLNMTETVTSILSIDEMLPAVAQGAIGIACRSDDDKMANY 300

Query: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360
           LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET
Sbjct: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360

Query: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 394
           SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS
Sbjct: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 376

[Close]

BLAST of CcUC10G197170 vs. ExPASy TrEMBL
Match: A0A6J1IZW2 (Hydroxymethylbilane synthase OS=Cucurbita maxima OX=3661 GN=LOC111481450 PE=3 SV=1)

HSP 1 Score: 673.3 bits (1736), Expect = 6.1e-190
Identity = 353/393 (89.82%), Postives = 361/393 (91.86%), Query Frame = 0


Query: 1   MGVLSSPSVSHSSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ 60
           M  LSSPSVS+S   RPCN+ SLS  GFSSLSLKPPAF+N  KKFHGFGLIRASVAVEQQ
Sbjct: 1   MVALSSPSVSNSPMARPCNLASLSLPGFSSLSLKPPAFTNAPKKFHGFGLIRASVAVEQQ 60

Query: 61  TEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAI 120
            EKTKVAL+RIGTRG                 SPLALAQAHETRDKLMASHPELAEDGAI
Sbjct: 61  PEKTKVALLRIGTRG-----------------SPLALAQAHETRDKLMASHPELAEDGAI 120

Query: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180
           QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP
Sbjct: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180

Query: 181 CNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240
           CNLPREDVRDAFISL AGSLAEL AGS++GTASLRRKSQLLNRYPSL+VLENFRGNVQTR
Sbjct: 181 CNLPREDVRDAFISLRAGSLAELPAGSVVGTASLRRKSQLLNRYPSLEVLENFRGNVQTR 240

Query: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 300
           L+KLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDD MANY
Sbjct: 241 LKKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDKMANY 300

Query: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360
           LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET
Sbjct: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360

Query: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 394
           SRRG YAIDDMIAMGKDAGKELLSRAGPGFFDS
Sbjct: 361 SRRGSYAIDDMIAMGKDAGKELLSRAGPGFFDS 376

[Close]

BLAST of CcUC10G197170 vs. ExPASy TrEMBL
Match: A0A6J1KA97 (Hydroxymethylbilane synthase OS=Cucurbita maxima OX=3661 GN=LOC111493083 PE=3 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 3.0e-189
Identity = 351/393 (89.31%), Postives = 358/393 (91.09%), Query Frame = 0


Query: 1   MGVLSSPSVSHSSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ 60
           MGV SSPS+SH    RPCN+ SLS  GFSSLSLKPPAFS G K+FHG GLIRASVAVEQQ
Sbjct: 1   MGVFSSPSISHYPMARPCNLGSLSRHGFSSLSLKPPAFSTGDKRFHGVGLIRASVAVEQQ 60

Query: 61  TEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAI 120
            EKTKVALVRIGTRG                 SPLALAQAHETR+KLMA HPELAEDGAI
Sbjct: 61  AEKTKVALVRIGTRG-----------------SPLALAQAHETREKLMAIHPELAEDGAI 120

Query: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180
           QIV+IKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP
Sbjct: 121 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180

Query: 181 CNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240
           CNLPREDVRDAFISLS GSLAEL AGS+IGTASLRRKSQLLNRYPSL VLENFRGNVQTR
Sbjct: 181 CNLPREDVRDAFISLSVGSLAELPAGSVIGTASLRRKSQLLNRYPSLNVLENFRGNVQTR 240

Query: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 300
           LRKLNEGVVQATLLALAGLRRLNMTE VTSILSIDEMLPAVAQGAIGIACRSDDD MANY
Sbjct: 241 LRKLNEGVVQATLLALAGLRRLNMTETVTSILSIDEMLPAVAQGAIGIACRSDDDKMANY 300

Query: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360
           LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET
Sbjct: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360

Query: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 394
           SRRGPYAIDDM+AMGKDAGKELLSRAGPGFFDS
Sbjct: 361 SRRGPYAIDDMVAMGKDAGKELLSRAGPGFFDS 376

[Close]

BLAST of CcUC10G197170 vs. ExPASy TrEMBL
Match: A0A6J1F354 (Hydroxymethylbilane synthase OS=Cucurbita moschata OX=3662 GN=LOC111441758 PE=3 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 8.8e-189
Identity = 351/393 (89.31%), Postives = 358/393 (91.09%), Query Frame = 0


Query: 1   MGVLSSPSVSHSSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ 60
           M  LSSPSVSHS    PCN+ SLS  GFSSLSLKPPAF+NG KK HGFGLIRASVAVEQQ
Sbjct: 1   MVALSSPSVSHSPMAHPCNLASLSLPGFSSLSLKPPAFTNGPKKLHGFGLIRASVAVEQQ 60

Query: 61  TEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAI 120
             KTKVAL+RIGTRG                 SPLALAQAHETRDKLMASHPELAEDGAI
Sbjct: 61  AGKTKVALLRIGTRG-----------------SPLALAQAHETRDKLMASHPELAEDGAI 120

Query: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180
           QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP
Sbjct: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180

Query: 181 CNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240
           CNLPREDVRDAFISL AGSLAEL AGS++GTASLRRKSQLLNRYPSL+VLENFRGNVQTR
Sbjct: 181 CNLPREDVRDAFISLRAGSLAELPAGSVVGTASLRRKSQLLNRYPSLEVLENFRGNVQTR 240

Query: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 300
           L+KLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDD MA Y
Sbjct: 241 LKKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDKMAEY 300

Query: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360
           LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET
Sbjct: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360

Query: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 394
           SRRG YAIDDMIAMGKDAGKELLSRAGPGFFDS
Sbjct: 361 SRRGSYAIDDMIAMGKDAGKELLSRAGPGFFDS 376

[Close]

BLAST of CcUC10G197170 vs. ExPASy TrEMBL
Match: A0A6J1DII9 (Hydroxymethylbilane synthase OS=Momordica charantia OX=3673 GN=LOC111020357 PE=3 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 3.3e-188
Identity = 348/393 (88.55%), Postives = 359/393 (91.35%), Query Frame = 0


Query: 1   MGVLSSPSVSHSSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQ 60
           MGV SSP ++HS   RPCNV SLS LGFSSLSLKPPAF NG KKF G GL+RASVAVEQQ
Sbjct: 1   MGVFSSPPITHSPMARPCNVGSLSPLGFSSLSLKPPAFCNGGKKFGGLGLVRASVAVEQQ 60

Query: 61  TEKTKVALVRIGTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAI 120
           TEKTKVALVRIGTRG                 SPLALAQA+ETRDKLMA HPELAEDGAI
Sbjct: 61  TEKTKVALVRIGTRG-----------------SPLALAQAYETRDKLMAIHPELAEDGAI 120

Query: 121 QIVVIKTTGDKILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILP 180
           QI++IKTTGDKILSQPLADIGGKGLFTKEIDDALIN DIDIAVHSMKDVPTYLPEKTILP
Sbjct: 121 QIIIIKTTGDKILSQPLADIGGKGLFTKEIDDALINSDIDIAVHSMKDVPTYLPEKTILP 180

Query: 181 CNLPREDVRDAFISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240
           CNLPREDVRDAFISLSAGSLAEL AGS+IGTASLRRKSQLLNRYPSLKVLENFRGNVQTR
Sbjct: 181 CNLPREDVRDAFISLSAGSLAELPAGSVIGTASLRRKSQLLNRYPSLKVLENFRGNVQTR 240

Query: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANY 300
           LRKLNEGVVQATLLALAGLRRLNMTENVTS+LSIDEMLPAVAQGAIGIACRS+DD MANY
Sbjct: 241 LRKLNEGVVQATLLALAGLRRLNMTENVTSVLSIDEMLPAVAQGAIGIACRSNDDKMANY 300

Query: 301 LASLNHEETRLAVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLET 360
           LASLNHEETRLAVVCERAFLE LDGSCRTPIAGYAS+DEDGNCIFKGLVASPDGTRVLET
Sbjct: 301 LASLNHEETRLAVVCERAFLEMLDGSCRTPIAGYASKDEDGNCIFKGLVASPDGTRVLET 360

Query: 361 SRRGPYAIDDMIAMGKDAGKELLSRAGPGFFDS 394
           SRRG YAIDDM+AMGKDAGKELLSRAGPGFFDS
Sbjct: 361 SRRGAYAIDDMVAMGKDAGKELLSRAGPGFFDS 376

[Close]

BLAST of CcUC10G197170 vs. TAIR 10
Match: AT5G08280.1 (hydroxymethylbilane synthase )

HSP 1 Score: 536.6 bits (1381), Expect = 1.7e-152
Identity = 278/380 (73.16%), Postives = 314/380 (82.63%), Query Frame = 0


Query: 12  SSTPRPCNVTSLSFLGFSSLSLKPPAFSNGAKKFHGFGLIRASVAVEQQTEKTKVALVRI 71
           SS    C++ S+S +GFS   +  PA     +K    G ++A VAVEQ   KT+ A++RI
Sbjct: 21  SSRVNTCSLGSVSAIGFSLPQISSPALGKCRRKQSSSGFVKACVAVEQ---KTRTAIIRI 80

Query: 72  GTRGRSPVCFSCLYLNLSKLDSPLALAQAHETRDKLMASHPELAEDGAIQIVVIKTTGDK 131
           GTRG                 SPLALAQA+ETR+KL   HPEL EDGAI I +IKTTGDK
Sbjct: 81  GTRG-----------------SPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDK 140

Query: 132 ILSQPLADIGGKGLFTKEIDDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDA 191
           ILSQPLADIGGKGLFTKEID+ALING IDIAVHSMKDVPTYLPEKTILPCNLPREDVRDA
Sbjct: 141 ILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDA 200

Query: 192 FISLSAGSLAELTAGSIIGTASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGVVQA 251
           FI L+A +LAEL AGS++GTASLRRKSQ+L++YP+L V ENFRGNVQTRL KL  G VQA
Sbjct: 201 FICLTAATLAELPAGSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQA 260

Query: 252 TLLALAGLRRLNMTENVTSILSIDEMLPAVAQGAIGIACRSDDDIMANYLASLNHEETRL 311
           TLLALAGL+RL+MTENV SILS+DEMLPAVAQGAIGIACR+DDD MA YLASLNHEETRL
Sbjct: 261 TLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRL 320

Query: 312 AVVCERAFLETLDGSCRTPIAGYASRDEDGNCIFKGLVASPDGTRVLETSRRGPYAIDDM 371
           A+ CERAFLETLDGSCRTPIAGYAS+DE+GNCIF+GLVASPDGT+VLETSR+GPY  +DM
Sbjct: 321 AISCERAFLETLDGSCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDM 380

Query: 372 IAMGKDAGKELLSRAGPGFF 392
           + MGKDAG+ELLSRAGPGFF
Sbjct: 381 VKMGKDAGQELLSRAGPGFF 380

The following BLAST results are available for this feature:

BLAST of CcUC10G197170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906286.1	2.8e-197	93.64	porphobilinogen deaminase, chloroplastic [Benincasa hispida]	[more]
KGN58748.2	1.3e-194	92.37	hypothetical protein Csa_002701 [Cucumis sativus]	[more]
XP_004149732.1	1.3e-194	92.37	porphobilinogen deaminase, chloroplastic [Cucumis sativus]	[more]
XP_023523547.1	6.6e-191	90.33	porphobilinogen deaminase, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949290.1	1.9e-190	90.08	porphobilinogen deaminase, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of CcUC10G197170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43082	1.0e-154	75.32	Porphobilinogen deaminase, chloroplastic OS=Pisum sativum OX=3888 GN=HEMC PE=1 S...	[more]
Q43316	2.4e-151	73.16	Porphobilinogen deaminase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HEMC...	[more]
Q6H6D2	5.7e-137	73.18	Porphobilinogen deaminase, chloroplastic OS=Oryza sativa subsp. japonica OX=3994...	[more]
A1B853	2.0e-81	53.40	Porphobilinogen deaminase OS=Paracoccus denitrificans (strain Pd 1222) OX=318586...	[more]
Q3SVF3	2.9e-80	52.25	Porphobilinogen deaminase OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 1...	[more]

BLAST of CcUC10G197170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCC7	9.4e-191	90.08	Hydroxymethylbilane synthase OS=Cucurbita moschata OX=3662 GN=LOC111452689 PE=3 ...	[more]
A0A6J1IZW2	6.1e-190	89.82	Hydroxymethylbilane synthase OS=Cucurbita maxima OX=3661 GN=LOC111481450 PE=3 SV...	[more]
A0A6J1KA97	3.0e-189	89.31	Hydroxymethylbilane synthase OS=Cucurbita maxima OX=3661 GN=LOC111493083 PE=3 SV...	[more]
A0A6J1F354	8.8e-189	89.31	Hydroxymethylbilane synthase OS=Cucurbita moschata OX=3662 GN=LOC111441758 PE=3 ...	[more]
A0A6J1DII9	3.3e-188	88.55	Hydroxymethylbilane synthase OS=Momordica charantia OX=3673 GN=LOC111020357 PE=3...	[more]

BLAST of CcUC10G197170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08280.1	1.7e-152	73.16	hydroxymethylbilane synthase	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000860	Porphobilinogen deaminase	PRINTS	PR00151	PORPHBDMNASE	coord: 160..179 score: 61.19 coord: 208..225 score: 54.23 coord: 129..149 score: 66.21 coord: 315..332 score: 53.17 coord: 228..245 score: 53.97
IPR000860	Porphobilinogen deaminase	TIGRFAM	TIGR00212	TIGR00212	coord: 92..384 e-value: 2.2E-94 score: 313.7
IPR000860	Porphobilinogen deaminase	PANTHER	PTHR11557	PORPHOBILINOGEN DEAMINASE	coord: 15..392
IPR000860	Porphobilinogen deaminase	HAMAP	MF_00260	Porphobil_deam	coord: 85..385 score: 32.528946
None	No IPR available	GENE3D	3.40.190.10		coord: 92..295 e-value: 1.1E-76 score: 258.7
None	No IPR available	GENE3D	3.40.190.10		coord: 187..287 e-value: 1.1E-76 score: 258.7
None	No IPR available	PANTHER	PTHR11557:SF8	BNAC02G01240D PROTEIN	coord: 15..392
None	No IPR available	CDD	cd13648	PBP2_PBGD_1	coord: 68..364 e-value: 0.0 score: 502.327
None	No IPR available	SUPERFAMILY	53850	Periplasmic binding protein-like II	coord: 91..303
IPR022418	Porphobilinogen deaminase, C-terminal	PFAM	PF03900	Porphobil_deamC	coord: 311..383 e-value: 2.5E-15 score: 56.6
IPR036803	Porphobilinogen deaminase, C-terminal domain superfamily	GENE3D	3.30.160.40		coord: 306..392 e-value: 3.9E-24 score: 86.8
IPR036803	Porphobilinogen deaminase, C-terminal domain superfamily	SUPERFAMILY	54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain	coord: 305..392
IPR022417	Porphobilinogen deaminase, N-terminal	PFAM	PF01379	Porphobil_deam	coord: 92..296 e-value: 1.2E-70 score: 237.2
IPR022419	Porphobilinogen deaminase, dipyrromethane cofactor binding site	PROSITE	PS00533	PORPHOBILINOGEN_DEAM	coord: 316..332

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G197170.1	CcUC10G197170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018160	peptidyl-pyrromethane cofactor linkage
biological_process	GO:0006782	protoporphyrinogen IX biosynthetic process
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0017157	regulation of exocytosis
biological_process	GO:0033014	tetrapyrrole biosynthetic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005096	GTPase activator activity
molecular_function	GO:0004418	hydroxymethylbilane synthase activity
molecular_function	GO:0045159	myosin II binding
molecular_function	GO:0019905	syntaxin binding