CcUC10G192760 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC10G192760
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionzinc finger CCCH domain-containing protein 5
LocationCicolChr10: 10157079 .. 10170412 (-)
RNA-Seq ExpressionCcUC10G192760
SyntenyCcUC10G192760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAGATTTAGATTTCAAACTCCCAAATTTTGTGTTCACGAAGCTGGGCTCCATGCATGAAATCTCCGACCATCGGACGGCGGCAACTTTAAACTTCCTTTTAGCGTGTACCCAGTGATTGCAGCAAAAGGGTTTCGAATTTTTCTCTTCACCACCGACGGCAGCAAGGTCGTTTGAACGGCTGCTGATAAATTGGAAGTTCCATCTCACCCACATCAACTCACCCGATTAACACAGCGATTGAATTCCTTTGTCACTCCCACACAGCGACGAGACGGTCTTTCGTTTCTCTATTGAGTTAGAGCTCCATTTTGGAGCACCACTGCGGAATTCTGCGAGCATAATGGAGGAACCTAAACTCATAGGAGAGGAAGAAGAGAAGCCATGTACGATGGAAATTCTATGCAGGAAGGAGAAGAGGAAAGCGTTGAAGAAGATCAAACGGAAGCAATTAAGAAAAGAAGTGGCGCTGAAAAAGCTACAGGAAGAGGAGGCGCGGTTGAACGACCCTGAAGAGCAGAGGAGGATTCGGTTGATGGAGCTGGAGGAGGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTCGAGGAGCGTGAAAGGGCATGGATGGAGGCTATGGAGTTGAAGAAGAAGAAGATGGCTGAGGAGGAAGAAGAAGAGCACCAACGGAGAGCGCTGGAAGAAGAATCGACGGCGCGGCAGGTTTTTCTTTCCCTTCTTGTGATTCTCTAGTGGCTATCTGCTATTTTATTTTACTTTATCCTAATTTTGCTTTGTTGTTGAACAGTACTCATAGCCTTTTTATAGATTTCTAGTTAGATTTCAACTTTATAGTGCATGATTACTGACTCAGGTTCCTCAATACATAAAAAACATCATTTGAAATTCTTGTAACAGAAACTGCAATCGCTTTCTATTGCTATGTCGTGGGTCACATATCTCCTCTTGTTTTAGCGGAGGAAAATTGTTCACTCCAACAGTTTGCAACCTTCTTTTGTAGGCTGAAAATGAAAACGAGTTTAATGGGGAAGATGGTTGGGAATACATTGAAGGGCCTGCAGAAGTAATCTGGAAAGGAGAAGAGATAATTTTGAAGAAGAAACTGATTAAGGTTCCTAAGAAAGGCGTTGCACCTGAGAAAAGCCTTGAGGTATTCATTCTGCAACCAGGCTATTATTGTTTTCTAGATCATCATTGTTTATGTTCAAAAAAATTTTCCTGGGACATGTTGGAACGAAAAGTCTTATGATCATAGATATTTATATATACTCTTTTTTGTAGGATGCTCATAGGCCTACATCAAACCCTCTTCCTCCGCAATCTGAAGCTTTTACAGATTATAAGAATGCACCAATTTCAACTAGACAAGTGATTGAGGATGTTGCAAGCCAAGTGCCAAACTTTGGAACTGAACAGGCATTTCTCCTTCTCTTCCTCTGTATACCTACTATCTGTATATACCTATTCCTTCTCTAGTAGTTTTATAGTTATTCAATTGTCATCTTAATAAATCTTATCCAAAAAAATTGGCATCTTAACAAATAACCTTTACCTATTATCTTTTTATTACGACAGGATAAATCACATTGTCCATTTCATCTTAAAACTGGAGCTTGTCGATTTGGTCAACGTTGTAGCAGAATTCACTTCTACCCTGACAAATCGTGTACATTACTTATCAAGAACATGTATAATGGTCCTGGCCTTGCTTGGGAGCAAGATGAGGGGCTGGAGGTCTGTTAATGATGCTCATACAATTATTGTATCCTCAAAATGAATTTGAAGTTTTGCTATTGCATCAGTTATCCCTATATAATTGTTACTATGGTTGGATTAGTAAGCATTAATGAATAGAATTAGATTAACTTGTTCAGGTACATTTTATGACCAGAGAAACTAAATATAATGCTGTTAGTTTTGTGGTCATCACACGTTCATTTTGAGTGGAAGAAAAGAGGGCTGTCATCCTTTTTCTGGTGTTCATGGGTTAATATATTGTTTCTTTATCAAGACATTTTGATTGAAGCTGGTAAAATTAATAATGGATTTATCAGTTTATTGTAATTTCACCTTACATTGTAAATGGATTACACTTTGGGTACAAGGCCTGATCTTTGATGAAATAATTTACGATGCTTAGTTCTTGGCAATTTGGCTGCTGGAAAAAATTATCTTCATAGTCAATGCTTCCTTAGATGCCTAATGCAACCGTTATACTGAGTTTCATCATGTTGTGATTATTAGTGGTTTTGATATTTAGTATCCTGCTTTTATTTTTGTTTTGAATTTCTTGACCTACTTTGTATCAGAGACTTACTGCAAGAATTGTGTCAAATTGTCATGGAGGGTTACAGTTTTGCTCTTGAGTCCCTTTGGAGTTGATAATACGAAAACAAATTTTGTATCCTACTGCATTGTCTTTTTAATTATCACGTAGTCTTTTACCTGCAAGCTTGTAGTTAGTAATAGCATATTGCATTCTTTTTGCTAATTTTCCCGTTCTGTCTCTGTTGAAGGAGTTTTATTTATATCATTTTTGTGAACTCTATGTATATATTTTCTGCATGCAGTCTAAGGACATTTAATTGTAATAGCCGTAATTTTTTTTATGAACCATAACAAGTTCCTTATTTATACTTTGTGAGCATTGTTAGTCAGTATATGAACAATCCAGATGAATGTCGAGGAGAATTGTATTCTCCCGGGAGATTTCCGATGAAACTTTTCCTTTCTCCGATGACCCTCCGATGAAACCTTTTCTCCCTCCAACGACCTAACTCCATCCATATCTGACATTCTCTTCCCTTCTCTGTCTCCCCACTACCCGACACCATTACTTCCCGTCTCTGGCGACAACCCCATCTATTCCTTCATGCTGGTTCTCTGACCAACGAAGTTATGTCACAAGGAGTAGAATTAGAAAGCTGTAAGGTGAATGGACTACCGTTTTGAATTTGGTACGAAGCCGATCAGTTTTGGGTTGAAGACATGGAAACAAGTAAAATTCTCTCACTATCTTGGACACACCTTCGTTGGTTTATGAATAATATATCAGGACTAATCAGAGGGTCTAGTGATCTTTTTTTCATGAACAAGGGACGTGATGAGTCGGGAGGGACAAGACTTTCAAATTCAAAGACCACAATGGATGGACCATGAGATGTGGAGTCTGGCCGGCAACAGGGGGTTGTCACTATATGCACGTCCCAATGGGAGATTCCAAACATGGATGGTACTCCTTTCTAAGCATGTTAAAAAGCTTTGGTAAGAAAAGAGAATCCCTTGGTCATCAGGAAAACCTAGATTCAGGGGCTAGAATGAATCTACCTACCAAGAATTATACACCTTTGCAAGCTCTTAACGCAACCAGAGTAAGCTATGCCGATGTTGTCAAGATTAAGAATGCCTCGTCAAGCTATGATGTACCCGAAGGAAAACAGAGCATACCAAAGGACTCTGCTTTGCGTAATGGAAAATAGAGCACTAATGCGTATTGGATTAAAAAAAATCAGGTCTTTCAAGAAGATTTCAACAATTTATGGGTGATAACAAGGTTATTTGTGTTAGACGATTGGAACGCAATAAGGAAACACTTAGAAGACTTATTCAACGTTAAATTCACTATTAATCCTCTGTTCTCAGACAAAGCATTGATCAAAAGTGAGGTAGGAAGAATGGAAGAATGGTTTGATGCTCCCGACAAATGGCAGGACTTCAGACAGTTTCATTTACTAATTGAACAATGGAGCAGTTTTAAGCATAGTCGGCCAGAATTCATTAGAGGTTTTGGTGGTTGGCTTACAATTAAAAATCTTCCACTAGATACTGGAGGAAGAGTACTTTTGAAGCCACCGGAGCTCACTTCAGGGGGCTGGAAAGCATTGCAATCGATACGCTTAATTTGTTAAATTGTTTCGAAGCAAGAATTAGAGTTAAAAGGAACTTATGTGGATTAATGCCGGCAACAATTGAAATTGCAGATGACAAGAGGGGAAATATCCTTCTAAACTTTGGTGACATTGAAAGTATAGAAGAATCAAATCTAAACAAGGGAGCTCTACTTTTATGAAACTTCTCAAACCCGATAGATTTACTCAGGCTCAATCAAGTTGCTCAGGATGAAGGTATAGAGGTTGAACTTCCGGTTCAAAATTGGGCATTTCTAAAACAGAACAAGCTGAATCCCTCAAAAACCCTTTTGCGGCCATGAAAAAGAATTCTGGCAAAGGCTTCAAAGTTTCGCCAGAGAAGAAGCAGTCAGTGTCGGAATTTTGCCATCCACATGGATCCATCACCCCAAACTAGATCAATGTGAAACCAAGGGAGGTTTTAGCCAACGAGCAATCAATAGAGGAACAAAATGCAGAAGGCCAATTGGATTCCAAGGACCGATTTGACTTCCCACCAAGAAATTCAAATATTAATAATGAAGTAAAAGTAAAAGAAATATTGATTGAAGAAGGTAGAAAGACAACCGCCATTGCCAACTAGTGCGAATTTAATAACGACTCGCTTCATATTCCACAGGCAAAGGAACTTCTCCCATCCAATGATGACAACTTAGCAGTCGGTTTCTCTCCCTCTAAAGATTCAAGAGTCGCGGAAGAAGGGGCTATTATTGGCCGAAAAGACAACCTATTTACTAATGATAAAATGTTGAACTCCAAAGGAAAGAGGAAATTGCTCAGGCCTTATTCAAAACACTACATTCAGAAGAATACGACATTCATCAATTCATGGACGACCATTGCAAATTCTGACCTATTTGAAGAATGTTGTGTTAGATTACAATACCCAGGCACCTTCCATAACAGGTTAGAAAAATCTCAACTTAAAAGTTGCTCTTTCTCTCAATCAGAATTTGAAATCCCCGGCTCTAATGTGACTTTTATTCAAGGTACTCCTTGCCAAGAGTCTCAAACCGATCAACACAACATTCAAGATGAAGATGAAGATTTAATAATCAGTGCAAGCAGTGAGGATTTGGAAATTTCAGATTCACAGGAGGTTTTAGAAGGGGAAGATTTACTTTCAATCAATGGAGGTGAACTGAAGACTCCTTTTCAATCAGAGGAGGGCCCAATTTTTGGTAAAGTGGAAGCTGCATCCTTCAAACAAATCGAGCAGAAGAACATTCCCCAACACCTATTGTAATAATAGAAGATTCTGATATGACCTTCGGGTAATAACCCACTTTCTATTCGCCTCAATGAAAATATTGTCGTGGAACGCCAGAGGATTAGGAGATAAAACCAAAAGAATGGTAGTAAAGCAAAGTTTAAAAAGACGAAATCCAGACTTAGTCTTAATCCAAGAAACAAAGAAGGATATTATTGATTTGGTTCTTGAAAAAGAACTATGGAGTTATAAAGATATTGGTTGGTCTTTTGTTGAGGCAATTGGTCGATCTGGTGGAATTTTAACAATGTGGGATGAAAGCAAGATCTCGGTCACTCAAGTTTTAAAGGGTGGTTACTCACTAATGGTCAAATGCTTGACTATCAATAAAAAAAGTTTCTGGGTAACAAATGTTTATGGGCCTAATGATTACAGAGAAAGGAAGCATCTTTGGGCAGAATTGCAATATTTGGCGGCTTATTGCGTGGAGGCTTGGTGCATTAGAGGGGACTTCAACGTCATAAGGCGGATTCAAGAAAGGCTCCCTCAAGGAAGAGTCATAAGGGGAATGAGAAAGTCCTAACATTTTTATAACCTCAGCACAATTAACGGAAATTCCACTTAGCAATGGTAAATTCACTTGGCCCCTAGAAGGCAATGTCACTTCCAGATTCCTCCTAGACAGATTCCTAATTTCAAGCAGTTGGGATGATTCTTTTGCTAACACAAGAGTCACAAGATAGATGTGCATCCTCTCTGATCACTTCCCCATTTTGTTAGAAGTTGGATCTTTTGAATGGGCTCCCCCTCCTTTTAGATTTTGCAACAGCTAGCTTGATCTAAAAGATTGTTGTTGTGTCATTGAGAATGCACTAGGAACGGATACTCAACATGGTTGGGCAGGATCTGTTTTATCTACTAAGCTCAGAAAGGTAAAGTCAGCAGTAAAGGCCTGGAACTTGAACTTTGAGAACGAAAAGAAGAAAACTGAAGAGGCCTTGATAAAAGAAATTGAAATTAGTGAATTGTTAATAGAAAACTCGGAGGACGATGGAGTAGGAAGAGATATTTGTTTATCATTGAAGGCTGATCTTTTGGCACTTTACTGCATCGAGGAAAGGAATCTAGTGCAGAAAAGCAAGTTGAATTGGATAAGCTTGGGGGATGAAAACTCAAAATTCTTCCACCGTTTCTTACTAGCTAAAAAGAGAAGGAATCTGATTTCAGAATTGAAAGATGATCAAGGGGTAGTAACAACCTCTTACAAGGAAATTGAAGAGTTAATTTTGAGATTTTATAGCTCATTATACATGAAAATTTGAAGAGATAGAGCTTTCCCACTCAACTTCCAATGGTTGGTGATTAATGACACTCAAAATAGGATACTGGTTTCTCGATTCATAGTAGAGGAAGTAAGAAGTGCGCTGAAATTGTTGGGTAAAAACAAAGCACGGGGACCGGATGGCTTCACCGTAGAATTTTTCCTGAAATTTTGGAAGAAATTGAAGGATACCATCATGAAATTATTTGAAGAATTTTATGAAAATGGGAAATTAAATTCCTGTATAAAGGAGATTTTCATTTGCTTGATTCTGAAAAAGGAGGATGCCGTTTTAGTGAAAGATTTCAAACCAATCAGCCTAACAACAATGCTGTATAAGCTCGTAGTCAAGGTGTTAGCGGAAAGATTAAGAAAGGTTATGTCGAATATAATCGCTCCTACTCCAAGTGCATTTATTGGGGAATGACAAATTCTCGACCCGGTTCTTATTGCTAATGAAGTGGTTGAGATTACATATCCAAAAAGAAAAAATGGTGGCTTTTAAAACTTGATCTTGGAAAAGCCTTTGATCGGGTAGATTGGACATTCCTTGAGAAAGCCCTAATTGGGAAGAAGTTTGATCCTAAATGGATATCGTGGATCATGGGTTGGTTTCTAACCCGAAGTTCTCAATCTTCATCAATGGAAGACCAAGGGGTAGAATTCAAGCCTCTAGAGGAATTAGACAAGGTGAACCACTCTCTCCCTTCCTCTTTCTACTAATTAGTGAAGTGCTTAATGGCTTGCTGTCAAGGTTGCATGAAAAGGGCAAATTTGAAGGATTTCTGGTGGGAAAAGATGCTATCCATGTAGTCTTCGTAGCCCTTGGATCAACATATCAAGAAGCTGGCAAAAAGTTGAAGCGTTGGCTGGTTACAAGGTGGGAAATGGAAGGAAAGTGGCCTTTTGGCTTGACCCTTGGGTGGCCAAATCCCCGCTTAGTGTCTTATTCCCAAGACTTTTCAAAATCTCCTTGAATACAAAGAGTGCAATATCAGATTTTTGGGATTCCTCACACTCATCTTGGTTCATCAACTTCAGACAGGCTCTTAAAGAAGAGGAGATGGTCGATTTTCAAAACCTCCTTGGTTTGGTTTCAGAAGTTTCCATCACCACAAACAAGGATAAACAGTATTGGGAGTTAGAAGCAAATGGAAACTATTTGGTAAAATCTCTTGTTAAGCATCTCCCTAAGGCCTCTCCCCCATTGGAAAGTTACTAAAGGACTCTCTTTGGGAATCCAAAAGTCCCAGGAGGGTCAATATTATCATTTGGATAATGCTTGAAGGACTTTTGAATTGTGCCTCAGTGTTACAATTAAAGCTCCCTTCTCATAGCCTTTCCCCACATGTTTGTCTTTTCTGTTTGGCGGATCATGAAGATTTACAACATCTATTCTTTAACTGTAATTTTGCAAAAAGCTACTGGTTCCGCTTGTTTGAATGCTTCAATCTAAGTTGGGCTTTCGACATGGTGTTTAAAGAAAACGTGCCTGAAATCCAAACCAAAACTGATTTGGTCTAATGCGGTTAAGGCTATACTTTCTGAAATATGGTTTGAAAGAAATCAGAGGGTGTTCCATAACAAAGCTTCCCCTTGGTTGGTGAAATTTGAGACAGCTCAGTTAAATGCTTCATCATGATGCTCTCTATCCAAGAAGTTTGAAGACTTCTCCATCCAAGATATCAACATCAATTGGAAGTTTTTTATTTTCCCCAATGAGTAGAGTCTTGTATTTAGGGGCAGATTCTACTTTTGTTAGTTTTGTCCGATTCAATTGCTCTTGTACTAGTTTTTGCTTTTTACGTTAGTTGCCTTTTTTGTTCACATGTTTAGGATATGATGAGAGTGTTAAGGGGGTGTCAACCTAGTTGAGATGTCCGGGTGCACTCGCTGATCCTTTGGTTAGGCTTCGGTTTATTGTATCTATTGTCATATTGTATGTCTCATTTCATTATCTAAATGAAGAGGCTCGTTTCTTTTTCAAAAAAAAAAAAAAGAAGTTCCTTATTTAGTTTTTCCCCATAAGTACTTGTATTGTCGAACCAAAATTACCATGGAGCTCCCAGCAATAAGATGGCTATAATCTCTACTGTGTGGGGTGGGTTACAATTTATTTATTATTATTTTTGGAGCTGGTGTCACTGTCAGAATTCTTGGCTAGTAATAGTAACCCGTTGTTATGTGGTCATTCTCAAGAGGAAAGCTTAGTTTGAGTGTGCTAAGAAAGCCATCTTATGGGTTTGGAAGAAATGATAAGTTAGTGTTTCAAGATAAACATAGCACCTTTTAGGGTATGTGGTGTTCGATTGCTTCTTGTGGTCAGTTCTGGTGTTATTTAAGAAACTTACTTTGTAATTACTCTATGTCTTGATTCAGGCCAACTGAAGCAGTTGTTACATAAGCTCCTTCGGTTGTGGGTTGGAGGATGGCTCATCTCCTGGTCATTTGAACATTTTGTGTTTGGTTGCGTGTTAGTTTCCTGAAAGAAAAGCCTAGAAATAAGCTAGACTGATGTGGCAGTAGAGAACTCACTTTGAGATGAAAAGCCCATTGCATTACTTGAAATTACTGCTCAACTTTCCTTTTAAATTCATGGCAGACTCTGGATGCCCAAAGGGACAGTGGAGAACTCTCTTCAATCATCTTTGCACCGAGAGATACCTTTGTCCATAACGAGTGATATTTGGATGTGTGTAAAGAAGGTTGCTTCAGCGGGTACCAAACCGTGGAAGTCCAACTTTTGGCTAACACTGAAGCTCTACTAAAATAAATTTTAATCGTATCATATCAATGGTTGCTTCAGCCGTTACTGCATTCATGGTCCAGGCTCTCCTCTCTCCTCTTTCATCTCTCCTAGCCTCTTTCCTTGTTTCTACTTTATCTTTTCCAGCCATATAGGCATGTTGGGGAGATGATGAGGCGTCTTCATCCTCCTCCTCCTCCTCCCTCCTTCATCATTGAGAGGAAAACTTTTTCTGTAGAAGTCTCTCATTGAATTAGGATAGTTGAAGCTTCTAGAGATAAGTCCTTTACTCTCACTCTTAAGATAGAATCCATCACATGGTTACATTCCACTTTTTCTTCCTCGATTGAGGTGCCTTTGAACCACAAGTTTTTCATCAAGTCTCATTTCGTTGAATATGATCTATGGGTGGAGAAAATCACTAATCGAAAAGGACATTTTGCATAGATCACCAAACTTGGAGTTAATGGAGGATTAAACAAACTTATCTTGCTGATGGTATCAACAAAAGTGGCAGGAAAGGTTTCTTTTCTCTCCATAGGTTTCATATAGACTACCCACCATCAAACAACATAACAACCCTTGTTCCATGACACTTTCTTACAAAGATGCTCTCCACAAACAAAAGATGACTTGTGATCGGTTGACAGCCCCCCCTTGTCCTACATATTTTTCACCTTACCCACTTCACCAACTCTCCAATCTTGTGAGCTTGCTGTTTTCTACTTGGATAAAGTTATCATCATCTTAAGATAGAACTTTCACAGTGGTTGGTATGATATTCTTTGGACTTTTCAATGAGAAGTGTCTGACTTTGGTTCCATTAGCCCTCTTCAACCAAATAAGACCCCTATTTGCAATCTCTCCCATTAGATTTTACTAACCCTAGATCTCACTTGTACAAATCATCTACCCTTACTTCACCAAGCCAGACACTTCCCATCAAAGAGCACAAAGAATATCATACCAATCATCATGGAAGTTGTGTCTTAAGATGATGATTGCTTTATTTGGGTAGAAAATAGCAAGCTCACAAGATTGGAGAGCTGGTGAAGTGTTGTGGAGTTAAGGATGTTCTGTTGTTTGATGAGGGGTATTGTGTGCGAAACCTTAAGGAGAAAAGAAACCTTTTTGGCTGCTTTTGTTGATATTGTTGGGCAAGATATGTTTGTTTAATCCTCCATTAACTCCAAGCTTGGTGATCTTTGCAAAATGTCCTTTTCGATTAGTGATTTTCTCCACCCATAGATCATATTCAACCAAACGAGATTTGATGAAAAACTTCTAGTTCAAATATGCTTCAATCAAGGAAGAAAAAGTGGAATGTAACCATGTGAGAGATTCTTTCTTAAGAGAGAAAGTAAAGGGCTTATCTGTAGAAGCTTCAATGATCCTAATTCCATGAGAGACTTGTACTGAAATTTTTTTCCTATCAATGGTGAAGGAGGGAGGAGGACGAAGATGCCTCATCATCTCCCTGGCATCCCTATTTGGTCGAAAAAGAGCCCATAGAAGCAGGGAGAGAGGAGAGGGGACAGCATTTTCCTAACTATAGGATATCATCAGAGTTCGGATGGAGGACTTCTTGCTATGATACTATCTTAAATCTACAATTAATGCAAGGGCGCTAATGGATTTAAGATTAAATTTACCATGGATTTCAGATACTGAAATCCACTAGTAAATTTAATTATTTCAACGTTTTAGCACTCCCTTCCTAGTCTACCTATTTTTGGTGTCATACAATTGTTTCTTATTATTACTATTTTTTCTTTTTTAAATTAAGAAACGGAGAATTTTATTATGAACAAAACAGAAAGAACCACAACCAATAGGGTTTAGGGAATTGAGGCTCCTAAGCGAAAAACAGGAAGATAAAAAAGAGCAGTGTAGAACACTTTAGGAGGAGGTAGTTGAACTGAGATTTTCACAAAAAAACATTGAAAGAAGAGATCATATGTGAGAACAATCTTCTATTTCTTTCCTTCCAAAGAGCCCATAGGAAAGCTCTACAAGCTACTCTACAAGATTCTTGCCTTTTCCTTAGCCATGATCCGGGCAATCATTCGAAAAAACGGTCTTCCACTCTCTTAGGAGTGATAAAAGGAACTACCTCATCGACTATGTTTGAGAATTCCCCTTAGTTTAGGTGAACCCACAACGATAATAAGAATAACCCCTGTTAACACATTGATAACCAACTCCAAGAAAGATAAACAAATTTAGCTTGGAAAGATTGTTTAAAATCAAGGAAAACAGAACTTGTTCCTATCTTCAAAATTTTGAACTCTCCACTGCATAATTGATCAAACTAGATTGAAAGTTCTAAAACATGCATTCTAAACACAAGAATACAAAGAAGGCATAAAAACTTGAGAGATTAAACTCTATGATAATAAATTCATTCAAATTGAATCTAAATACAACACTATTTATACTAAATGAAAGGTCACAAAGAGAGGACACAACTTTTCACCTATATTGTCTAAATTCAGCCCTAACCCTTGAAGTTCATACTTGAACCTTCAATAAATGCAAATACATGAATTAAATGATACATAGGGCTTAAGATGATGAATCTGGATTTTCAGATTCATTATGGCTCTTGGGTGGCCAAATGTCTTTTGGAGTTTCAAAGGTTGCAATTCTTCACCATAGGCTGGAAAACTTAGCTTCGAAGCAAGCATTTTATCCTTCTTGAAGTCTTTTAGCTCTAATTCTTGTCATTGGTCTTTGTGGCATAATGATTGCCTCATGATTAGGTTGACTTTGAGTAGCCATCCATTGATTTTCAATATGAACTTCATTTGAGCTAGTTTTGAGCTTGTTGAGCTCAAACCAAAACAAATTAAAACGGTTGATAATATGCATCGAGCCTTTATGAGCAAACTCACAGTGAAGGAAAAGGTGATTGCTGGATTCTTCACTCTTGTAACAAAAAAGACAGAAGTTTGGAAAGAGAGCCATGTTTGGATTCCTTTTTGAATTCTTTCCATAGTTTTTAGACTTACATGGACACCATAGAAAAAAATTTACTTTCTTGGAATTTTTCCTTCACTGGTGCTTTTGGCAACGAGCTGATTCAGAAACACAATTACTATGAAGAATTCTGTTTGCAGACTTGCTAGAAAAAAATCCCAGACGACTCAGGAGCCCAACAGATTTTGTTTTTCTCTGAATTTGGTTTTAGTTCCTCAAGGACGTTGATAATCCTTTCCCATTCAGCCAATTCACGGTCAGAAAGACCCCTTCTAGGATTCAAATTTCACACTTCTCTCTGAGAGGACCAAACATTTTGGATGGTATAGTTTTTGGAATTTGATATGGGAATAAATGGCTGGGCTTTCTTCGCAGAAGGGCCTCAAAGAGGGCAATCCCAGAATTCGACAATATCTCCAATCCTAGCTTTATAAGTGATGTTCCTGCAAAGAAATCTTTCTTCTTACAAATGTTTTTCCAGGGGGTGTAAGTAGTCTTTTCATTTCTAATGCAAGGAATCCAGCAACACTGAGACTGAGTGGCCAAATTGCTTTTTATCACCTTCTTCCAGAGGGCATTCTCGGGCTAAGAATATCTCCACAACCACTTGGCTAGAAAAGCATCATTCTTCTTCTGTAAATCACCCACACACAGGGCCTCTGAGATTCAAGTGACAGTACCTGTTGTCCAATTAACTAAGTGACTTCCTCCCCTTTGGTTGCTCCTTCCCTTACGAAATCCCTGATAATTTTGTCAATGATGGAGCCACTTTGCCAGGGATTCTGAAAACGCAGATCAATTGAAGCCATTAGCAACACTTATTTTTTACCCTGATAAGGGAAAATTTGAAAGAAGCCTACTTTTTATTTATCATTTTGTTTCTTCCTTTTCTTCCCTCTGATGAATTAAAACAATTCTGTGCACTTTGATAGGAAAAGTCTTCGATAACCTTCAATTGTTCATTGACACTCTTGTTTCTCATTTTTATGAATAAAACTAGAGATATATCCTATTTTTTGACAACAGTCAGGATGGACTGTTTAAATTCCTATTTCTTCCCTAGATATCTATACTTTACCTTAATTACATCTAGACTTCACTAAGCTCAGGTAACAGCATAATTATGACCTATTTGGACTTTGGAGTGATCATGGATGGCACCTGGATTTGAC

mRNA sequence

AACAGATTTAGATTTCAAACTCCCAAATTTTGTGTTCACGAAGCTGGGCTCCATGCATGAAATCTCCGACCATCGGACGGCGGCAACTTTAAACTTCCTTTTAGCGTGTACCCAGTGATTGCAGCAAAAGGGTTTCGAATTTTTCTCTTCACCACCGACGGCAGCAAGGTCGTTTGAACGGCTGCTGATAAATTGGAAGTTCCATCTCACCCACATCAACTCACCCGATTAACACAGCGATTGAATTCCTTTGTCACTCCCACACAGCGACGAGACGGTCTTTCGTTTCTCTATTGAGTTAGAGCTCCATTTTGGAGCACCACTGCGGAATTCTGCGAGCATAATGGAGGAACCTAAACTCATAGGAGAGGAAGAAGAGAAGCCATGTACGATGGAAATTCTATGCAGGAAGGAGAAGAGGAAAGCGTTGAAGAAGATCAAACGGAAGCAATTAAGAAAAGAAGTGGCGCTGAAAAAGCTACAGGAAGAGGAGGCGCGGTTGAACGACCCTGAAGAGCAGAGGAGGATTCGGTTGATGGAGCTGGAGGAGGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTCGAGGAGCGTGAAAGGGCATGGATGGAGGCTATGGAGTTGAAGAAGAAGAAGATGGCTGAGGAGGAAGAAGAAGAGCACCAACGGAGAGCGCTGGAAGAAGAATCGACGGCGCGGCAGGCTGAAAATGAAAACGAGTTTAATGGGGAAGATGGTTGGGAATACATTGAAGGGCCTGCAGAAGTAATCTGGAAAGGAGAAGAGATAATTTTGAAGAAGAAACTGATTAAGGTTCCTAAGAAAGGCGTTGCACCTGAGAAAAGCCTTGAGGATGCTCATAGGCCTACATCAAACCCTCTTCCTCCGCAATCTGAAGCTTTTACAGATTATAAGAATGCACCAATTTCAACTAGACAAGTGATTGAGGATGTTGCAAGCCAAGTGCCAAACTTTGGAACTGAACAGGATAAATCACATTGTCCATTTCATCTTAAAACTGGAGCTTGTCGATTTGGTCAACGTTGTAGCAGAATTCACTTCTACCCTGACAAATCGTGTACATTACTTATCAAGAACATGTATAATGGTCCTGGCCTTGCTTGGGAGCAAGATGAGGGGCTGGAGGTCTGTTAATGATGCTCATACAATTATTACTTCACTAAGCTCAGGTAACAGCATAATTATGACCTATTTGGACTTTGGAGTGATCATGGATGGCACCTGGATTTGAC

Coding sequence (CDS)

ATGGAGGAACCTAAACTCATAGGAGAGGAAGAAGAGAAGCCATGTACGATGGAAATTCTATGCAGGAAGGAGAAGAGGAAAGCGTTGAAGAAGATCAAACGGAAGCAATTAAGAAAAGAAGTGGCGCTGAAAAAGCTACAGGAAGAGGAGGCGCGGTTGAACGACCCTGAAGAGCAGAGGAGGATTCGGTTGATGGAGCTGGAGGAGGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTCGAGGAGCGTGAAAGGGCATGGATGGAGGCTATGGAGTTGAAGAAGAAGAAGATGGCTGAGGAGGAAGAAGAAGAGCACCAACGGAGAGCGCTGGAAGAAGAATCGACGGCGCGGCAGGCTGAAAATGAAAACGAGTTTAATGGGGAAGATGGTTGGGAATACATTGAAGGGCCTGCAGAAGTAATCTGGAAAGGAGAAGAGATAATTTTGAAGAAGAAACTGATTAAGGTTCCTAAGAAAGGCGTTGCACCTGAGAAAAGCCTTGAGGATGCTCATAGGCCTACATCAAACCCTCTTCCTCCGCAATCTGAAGCTTTTACAGATTATAAGAATGCACCAATTTCAACTAGACAAGTGATTGAGGATGTTGCAAGCCAAGTGCCAAACTTTGGAACTGAACAGGATAAATCACATTGTCCATTTCATCTTAAAACTGGAGCTTGTCGATTTGGTCAACGTTGTAGCAGAATTCACTTCTACCCTGACAAATCGTGTACATTACTTATCAAGAACATGTATAATGGTCCTGGCCTTGCTTGGGAGCAAGATGAGGGGCTGGAGGTCTGTTAA

Protein sequence

MEEPKLIGEEEEKPCTMEILCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEHQRRALEEESTARQAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEVC
Homology
[Close]
BLAST of CcUC10G192760 vs. NCBI nr
Match: XP_038905963.1 (zinc finger CCCH domain-containing protein 5 isoform X3 [Benincasa hispida] >XP_038905964.1 zinc finger CCCH domain-containing protein 5 isoform X3 [Benincasa hispida])

HSP 1 Score: 493.4 bits (1269), Expect = 1.2e-135
Identity = 260/269 (96.65%), Postives = 261/269 (97.03%), Query Frame = 0 

Query: 1   MEEPKLIGEEEEKPCTMEILCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQR 60
           MEEP LIGEEEEKPC+ME LCRKEKRKALKKIKRKQLRKEVALK LQEEEARLNDPEEQR
Sbjct: 1   MEEPNLIGEEEEKPCSMENLCRKEKRKALKKIKRKQLRKEVALKMLQEEEARLNDPEEQR 60

Query: 61  RIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEHQRRALEEESTARQA 120
           RIRLMELEEEERSERERKLFEE ERAWMEAMELKKKKMAEEEEEE QRRALEEESTARQA
Sbjct: 61  RIRLMELEEEERSERERKLFEESERAWMEAMELKKKKMAEEEEEEQQRRALEEESTARQA 120

Query: 121 ENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLP 180
           ENENEFN EDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGV PEKSLEDAHRPTSNPLP
Sbjct: 121 ENENEFNEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVQPEKSLEDAHRPTSNPLP 180

Query: 181 PQSEAFTDYKNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFY 240
           PQSEAFTDY NAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFY
Sbjct: 181 PQSEAFTDYMNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFY 240

Query: 241 PDKSCTLLIKNMYNGPGLAWEQDEGLEVC 270
           PDKSCTLLIKNMYNGPGLAWEQDEGLEVC
Sbjct: 241 PDKSCTLLIKNMYNGPGLAWEQDEGLEVC 269

[Close]
BLAST of CcUC10G192760 vs. NCBI nr
Match: XP_038905961.1 (zinc finger CCCH domain-containing protein 5 isoform X2 [Benincasa hispida] >XP_038905962.1 zinc finger CCCH domain-containing protein 5 isoform X2 [Benincasa hispida])

HSP 1 Score: 487.6 bits (1254), Expect = 6.7e-134
Identity = 258/267 (96.63%), Postives = 259/267 (97.00%), Query Frame = 0 

Query: 1   MEEPKLIGEEEEKPCTMEILCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQR 60
           MEEP LIGEEEEKPC+ME LCRKEKRKALKKIKRKQLRKEVALK LQEEEARLNDPEEQR
Sbjct: 1   MEEPNLIGEEEEKPCSMENLCRKEKRKALKKIKRKQLRKEVALKMLQEEEARLNDPEEQR 60

Query: 61  RIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEHQRRALEEESTARQA 120
           RIRLMELEEEERSERERKLFEE ERAWMEAMELKKKKMAEEEEEE QRRALEEESTARQA
Sbjct: 61  RIRLMELEEEERSERERKLFEESERAWMEAMELKKKKMAEEEEEEQQRRALEEESTARQA 120

Query: 121 ENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLP 180
           ENENEFN EDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGV PEKSLEDAHRPTSNPLP
Sbjct: 121 ENENEFNEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVQPEKSLEDAHRPTSNPLP 180

Query: 181 PQSEAFTDYKNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFY 240
           PQSEAFTDY NAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFY
Sbjct: 181 PQSEAFTDYMNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFY 240

Query: 241 PDKSCTLLIKNMYNGPGLAWEQDEGLE 268
           PDKSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 PDKSCTLLIKNMYNGPGLAWEQDEGLE 267

[Close]
BLAST of CcUC10G192760 vs. NCBI nr
Match: XP_008452219.1 (PREDICTED: zinc finger CCCH domain-containing protein 5 [Cucumis melo])

HSP 1 Score: 471.9 bits (1213), Expect = 3.8e-129
Identity = 251/277 (90.61%), Postives = 259/277 (93.50%), Query Frame = 0 

Query: 1   MEEPKLIG----------EEEEKPCTMEILCRKEKRKALKKIKRKQLRKEVALKKLQEEE 60
           MEEPKL G          EEE KPC+++ LCRKEKRKALKKIKRKQLRKE+ALK+LQEEE
Sbjct: 1   MEEPKLGGGGGGGEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQEEE 60

Query: 61  ARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEHQRRA 120
           ARLNDPEEQRR++LMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEE QRRA
Sbjct: 61  ARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRA 120

Query: 121 LEEESTARQAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLED 180
           LEEEST RQAENENEFN EDGWEYIEGPAE+IWKGEEIILKKKLIKVPKKGV PEKSLED
Sbjct: 121 LEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKSLED 180

Query: 181 AHRPTSNPLPPQSEAFTDYKNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRF 240
           AHRPTSNPLPPQSEAFTDYKN PISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRF
Sbjct: 181 AHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRF 240

Query: 241 GQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 268
           GQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 GQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 277

[Close]
BLAST of CcUC10G192760 vs. NCBI nr
Match: XP_031738076.1 (zinc finger CCCH domain-containing protein 5 isoform X3 [Cucumis sativus])

HSP 1 Score: 467.6 bits (1202), Expect = 7.2e-128
Identity = 247/269 (91.82%), Postives = 257/269 (95.54%), Query Frame = 0 

Query: 1   MEEPKLIGEEEE--KPCTMEILCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEE 60
           MEE +LIGEEEE  KPC++E LCRKEKRKALKKIKRKQLRKE+ALK+LQEEE RLNDPEE
Sbjct: 1   MEELELIGEEEEEVKPCSVENLCRKEKRKALKKIKRKQLRKELALKRLQEEEVRLNDPEE 60

Query: 61  QRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEHQRRALEEESTAR 120
           QRRI+LMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEE QRRALEEEST R
Sbjct: 61  QRRIQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPR 120

Query: 121 QAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNP 180
           +AENENEFN EDGWEYIEGPAE+IWKGEEIILKKKLIKVPKK V PEKS EDAHRPTSNP
Sbjct: 121 EAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKSVEPEKSFEDAHRPTSNP 180

Query: 181 LPPQSEAFTDYKNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIH 240
           LPPQSEAFTDYKN PIST+QVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIH
Sbjct: 181 LPPQSEAFTDYKNTPISTKQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIH 240

Query: 241 FYPDKSCTLLIKNMYNGPGLAWEQDEGLE 268
           FYP+KSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 FYPEKSCTLLIKNMYNGPGLAWEQDEGLE 269

[Close]
BLAST of CcUC10G192760 vs. NCBI nr
Match: XP_004134259.1 (zinc finger CCCH domain-containing protein 5 isoform X2 [Cucumis sativus] >KAE8650193.1 hypothetical protein Csa_009557 [Cucumis sativus])

HSP 1 Score: 467.6 bits (1202), Expect = 7.2e-128
Identity = 247/269 (91.82%), Postives = 257/269 (95.54%), Query Frame = 0 

Query: 1   MEEPKLIGEEEE--KPCTMEILCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEE 60
           MEE +LIGEEEE  KPC++E LCRKEKRKALKKIKRKQLRKE+ALK+LQEEE RLNDPEE
Sbjct: 1   MEELELIGEEEEEVKPCSVENLCRKEKRKALKKIKRKQLRKELALKRLQEEEVRLNDPEE 60

Query: 61  QRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEHQRRALEEESTAR 120
           QRRI+LMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEE QRRALEEEST R
Sbjct: 61  QRRIQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPR 120

Query: 121 QAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNP 180
           +AENENEFN EDGWEYIEGPAE+IWKGEEIILKKKLIKVPKK V PEKS EDAHRPTSNP
Sbjct: 121 EAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKSVEPEKSFEDAHRPTSNP 180

Query: 181 LPPQSEAFTDYKNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIH 240
           LPPQSEAFTDYKN PIST+QVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIH
Sbjct: 181 LPPQSEAFTDYKNTPISTKQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIH 240

Query: 241 FYPDKSCTLLIKNMYNGPGLAWEQDEGLE 268
           FYP+KSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 FYPEKSCTLLIKNMYNGPGLAWEQDEGLE 269

[Close]
BLAST of CcUC10G192760 vs. ExPASy Swiss-Prot
Match: Q9SY74 (Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=At1g10320 PE=2 SV=2)

HSP 1 Score: 268.9 bits (686), Expect = 6.4e-71
Identity = 161/280 (57.50%), Postives = 201/280 (71.79%), Query Frame = 0 

Query: 3   EPKLIGEEEEKPCTMEILCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRI 62
           E +   E +EK   M    RKEKRKA+KK+KRKQ+RKE+A K+ +E +A+LNDP EQ R+
Sbjct: 19  EKESFEESKEKAAEMS---RKEKRKAMKKLKRKQVRKEIAAKEREEAKAKLNDPAEQERL 78

Query: 63  RLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEE----EEEEHQRRALEEESTAR 122
           + +E E+  R E+E K FEE ERAW EAME+K+KK  EE    EEEE + + LEE     
Sbjct: 79  KAIEEEDARRREKELKDFEESERAWREAMEIKRKKEEEEEAKREEEERRWKDLEELRKLE 138

Query: 123 QAENENEFNGEDG-WEYI-EGPAEVIWKGEEIILKKKLIKVPKKGVA---------PEKS 182
            + N+     EDG +EYI EGP E+I++G EIILKK  ++VPKK V           E  
Sbjct: 139 ASGNDECGEDEDGEYEYIEEGPPEIIFQGNEIILKKNKVRVPKKSVVQVDGHESSNAEFV 198

Query: 183 LEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 242
           L+ + RPTSNPLPP SEA  +Y+N   S +Q++E VA +VPNFGTEQDK+HCPFHLKTGA
Sbjct: 199 LQISDRPTSNPLPPGSEASANYQNVS-SAQQILESVAQEVPNFGTEQDKAHCPFHLKTGA 258

Query: 243 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 268
           CRFGQRCSR+HFYP+KSCTLL+KNMYNGPG+ WEQDEGLE
Sbjct: 259 CRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWEQDEGLE 294

[Close]
BLAST of CcUC10G192760 vs. ExPASy Swiss-Prot
Match: Q6YVX9 (Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0557500 PE=2 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 4.0e-41
Identity = 111/247 (44.94%), Postives = 145/247 (58.70%), Query Frame = 0 

Query: 22  RKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEERSERERKLFE 81
           RKE+R+  KK +R++ R+E A    +  EA   DPEE+RR+R +E  E + SER R+ FE
Sbjct: 18  RKERRRERKKERRRRARREAAEAARKAAEALAADPEEERRLRELEEAEADASERARRAFE 77

Query: 82  ERERAWMEAMELKKKKMAEEEEEEHQRRALEEESTARQAENENEFNGEDGWEYIE-GPAE 141
           + ER W+EA   +  + A    EE    A E+ S   + ++ N    +D WEY+E GPAE
Sbjct: 78  DAERRWLEAAAARAAEKAAAAREE--STAPEDSSREYKDDHGNGTEEDDEWEYVEDGPAE 137

Query: 142 VIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVI 201
           +IW+G EI +KKK++KVPKK                             +N PI      
Sbjct: 138 IIWEGNEITVKKKMVKVPKKA---------------------------KENQPI------ 197

Query: 202 EDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAW 261
                       +QDK+HCPFHLKTGACRFG RCSR+HFYPDKSCTLL++NMY+GPGLA 
Sbjct: 198 ------------QQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGLAL 217

Query: 262 EQDEGLE 268
           EQDEGLE
Sbjct: 258 EQDEGLE 217

[Close]
BLAST of CcUC10G192760 vs. ExPASy Swiss-Prot
Match: Q15696 (U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Homo sapiens OX=9606 GN=ZRSR2 PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 7.0e-09
Identity = 81/253 (32.02%), Postives = 121/253 (47.83%), Query Frame = 0 

Query: 12  EKPCTMEILCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEE 71
           EK    E    K+ R ALKK KRK+ R+E+A  +L++      + EE   I   +LEEE+
Sbjct: 5   EKMTFPEKPSHKKYRAALKKEKRKKRRQELA--RLRDSGLSQKEEEEDTFIEEQQLEEEK 64

Query: 72  RSERER-KLFEE---RERAWMEAMELKKKK--MAEEEEEEHQRRALEEESTARQAENENE 131
             ERER +L EE   RE+   E   +KK+K   A++ +EE +R+  E+    ++ E E E
Sbjct: 65  LLERERQRLHEEWLLREQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQWEEQQRKEREEE 124

Query: 132 FNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQSEA 191
                                    ++K  +  +K  A +K L+ A     N    Q+  
Sbjct: 125 -------------------------EQKRQEKKEKEEALQKMLDQAENELENGTTWQN-- 184

Query: 192 FTDYKNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSC 251
                  P+  R +             E+D+++CPF+ KTGACRFG RCSR H +P  S 
Sbjct: 185 ----PEPPVDFRVM-------------EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSP 211

Query: 252 TLLIKNMYNGPGL 259
           TLLIK+M+   G+
Sbjct: 245 TLLIKSMFTTFGM 211

[Close]
BLAST of CcUC10G192760 vs. ExPASy Swiss-Prot
Match: Q15695 (Putative U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 OS=Homo sapiens OX=9606 GN=ZRSR2P1 PE=5 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-07
Identity = 77/242 (31.82%), Postives = 115/242 (47.52%), Query Frame = 0 

Query: 23  KEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEERSERER-KLFE 82
           K+ R ALKK KRK+ R+E+A  +   +     + EE   I   +LEEE+  ERER +L E
Sbjct: 22  KKYRAALKKEKRKKRRQELARLR---DSGLSQEEEEDTFIEEQQLEEEKLLERERERLHE 81

Query: 83  E---RERAWMEAMELKKKK--MAEEEEEEHQRRALEEESTARQAENENEFNGEDGWEYIE 142
           E   RE+   E   +KK+K   A++  EE +R+  E+    ++ E E E           
Sbjct: 82  EWLLREQKAQEEFRIKKEKEEAAKKWLEEQERKLKEQWKEQQRKEREEE----------- 141

Query: 143 GPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQSEAFTDYKNAPIST 202
                         ++K  +  +K  A +K L+ A     N    Q+         P+  
Sbjct: 142 --------------EQKQQEKKEKEEAVQKMLDQAENDLENSTTWQN------PEPPVDF 201

Query: 203 RQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGP 259
           R +             E+D+++CPF+ KTGACRFG RCSR H +P  S TLLIK+M+   
Sbjct: 202 RVM-------------EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTF 216

[Close]
BLAST of CcUC10G192760 vs. ExPASy Swiss-Prot
Match: Q62377 (U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Mus musculus OX=10090 GN=Zrsr2 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.0e-07
Identity = 76/236 (32.20%), Postives = 119/236 (50.42%), Query Frame = 0 

Query: 23  KEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEERSERERKLFEE 82
           ++K  AL+K +R++ R++ AL +L+E E    + EE        L EE+R E ER L EE
Sbjct: 19  RKKYLALRKKERRKRRRQ-ALARLREAELAQKEEEED------PLAEEKRLEEERLLEEE 78

Query: 83  RERAWMEAMELKKKKMAEEEEEEHQRRALEEESTARQAENENEFNGEDGWEYIEGPAEVI 142
           R+R   E + L+++K    +EE   ++  EEE+  R+ E E +   E  WE  +      
Sbjct: 79  RQRLHEEWL-LREEK---AQEEFRAKKKKEEEARKRKEELERKLKAE--WEEQQ------ 138

Query: 143 WKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVIED 202
            + E    ++K  +  ++  A +K L+ A     N    Q+         P+  R +   
Sbjct: 139 -RKEREEEEQKRQEKREREEAVQKMLDQAENELENGGTWQN------PEPPMDIRVL--- 198

Query: 203 VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGL 259
                     E+D+++CPF+ KTGACRFG RCSR H +P  S TLLIK M+   G+
Sbjct: 199 ----------EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGM 215

[Close]
BLAST of CcUC10G192760 vs. ExPASy TrEMBL
Match: A0A1S3BUH0 (zinc finger CCCH domain-containing protein 5 OS=Cucumis melo OX=3656 GN=LOC103493302 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.8e-129
Identity = 251/277 (90.61%), Postives = 259/277 (93.50%), Query Frame = 0 

Query: 1   MEEPKLIG----------EEEEKPCTMEILCRKEKRKALKKIKRKQLRKEVALKKLQEEE 60
           MEEPKL G          EEE KPC+++ LCRKEKRKALKKIKRKQLRKE+ALK+LQEEE
Sbjct: 1   MEEPKLGGGGGGGEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQEEE 60

Query: 61  ARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEHQRRA 120
           ARLNDPEEQRR++LMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEE QRRA
Sbjct: 61  ARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRA 120

Query: 121 LEEESTARQAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLED 180
           LEEEST RQAENENEFN EDGWEYIEGPAE+IWKGEEIILKKKLIKVPKKGV PEKSLED
Sbjct: 121 LEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKSLED 180

Query: 181 AHRPTSNPLPPQSEAFTDYKNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRF 240
           AHRPTSNPLPPQSEAFTDYKN PISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRF
Sbjct: 181 AHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRF 240

Query: 241 GQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 268
           GQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 GQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 277

[Close]
BLAST of CcUC10G192760 vs. ExPASy TrEMBL
Match: A0A6J1J5M6 (zinc finger CCCH domain-containing protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111482827 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.8e-127
Identity = 247/278 (88.85%), Postives = 257/278 (92.45%), Query Frame = 0 

Query: 1   MEEPKLIGEEE-----------EKPCTMEILCRKEKRKALKKIKRKQLRKEVALKKLQEE 60
           M+EP+ +GEEE           EKPC++E LCRKEKRKALKKIKRKQLRKE ALKKLQEE
Sbjct: 1   MKEPEFVGEEEEKPQGTEAGPLEKPCSLENLCRKEKRKALKKIKRKQLRKEEALKKLQEE 60

Query: 61  EARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEHQRR 120
           E RLNDPEE+RRIRLMELEEEERSERERKLFEERERAW+EAMELKKKKMAEEEEEE +RR
Sbjct: 61  EVRLNDPEEKRRIRLMELEEEERSERERKLFEERERAWLEAMELKKKKMAEEEEEEQRRR 120

Query: 121 ALEEESTARQAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLE 180
           ALEEESTARQAENENE N EDGWEYIEGPAEVIWKGEEIILKKKLIK+PKKGV PEKSLE
Sbjct: 121 ALEEESTARQAENENELNEEDGWEYIEGPAEVIWKGEEIILKKKLIKIPKKGVEPEKSLE 180

Query: 181 DAHRPTSNPLPPQSEAFTDYKNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACR 240
           DAHRPTSNPLPPQSE FTD KNAPISTRQVI+DVASQVPNFGTEQDKSHCPFHLKTGACR
Sbjct: 181 DAHRPTSNPLPPQSEDFTDCKNAPISTRQVIDDVASQVPNFGTEQDKSHCPFHLKTGACR 240

Query: 241 FGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 268
           FGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 FGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 278

[Close]
BLAST of CcUC10G192760 vs. ExPASy TrEMBL
Match: A0A6J1ERZ7 (zinc finger CCCH domain-containing protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111435982 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.2e-126
Identity = 249/279 (89.25%), Postives = 257/279 (92.11%), Query Frame = 0 

Query: 1   MEEPKLIGEEE-----------EKPCTMEILCRKEKRKALKKIKRKQLRKEVALKKLQEE 60
           MEEP+ +GEEE           EKPC++E LCRKEKRKALKKIKRKQLRKE ALKKLQEE
Sbjct: 1   MEEPEFVGEEEEKPQGTEAGSIEKPCSLENLCRKEKRKALKKIKRKQLRKEEALKKLQEE 60

Query: 61  EARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWMEAMEL-KKKKMAEEEEEEHQR 120
           EARLNDPEEQRRIRLMELEEEERSERERKLFEERERAW+EAMEL KKKKMAEEEEEE +R
Sbjct: 61  EARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWLEAMELNKKKKMAEEEEEEQRR 120

Query: 121 RALEEESTARQAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSL 180
           RALEEESTARQAENENE N EDGWEYIEGPAEVIWKG+EIILKKKLIKVPKKGV PEKSL
Sbjct: 121 RALEEESTARQAENENELNEEDGWEYIEGPAEVIWKGDEIILKKKLIKVPKKGVEPEKSL 180

Query: 181 EDAHRPTSNPLPPQSEAFTDYKNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGAC 240
           EDAHRPTSNPLPPQSE  TD KNAPISTRQVI+DVASQVPNFGTEQDKSHCPFHLKTGAC
Sbjct: 181 EDAHRPTSNPLPPQSEDITDCKNAPISTRQVIDDVASQVPNFGTEQDKSHCPFHLKTGAC 240

Query: 241 RFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 268
           RFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 RFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 279

[Close]
BLAST of CcUC10G192760 vs. ExPASy TrEMBL
Match: A0A5D3BNF0 (Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00530 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.3e-122
Identity = 235/245 (95.92%), Postives = 240/245 (97.96%), Query Frame = 0 

Query: 23  KEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEERSERERKLFEE 82
           KEKRKALKKIKRKQLRKE+ALK+LQEEEARLNDPEEQRR++LMELEEEERSERERKLFEE
Sbjct: 26  KEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEE 85

Query: 83  RERAWMEAMELKKKKMAEEEEEEHQRRALEEESTARQAENENEFNGEDGWEYIEGPAEVI 142
           RERAWMEAMELKKKKMAEEEEEE QRRALEEEST RQAENENEFN EDGWEYIEGPAE+I
Sbjct: 86  RERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEII 145

Query: 143 WKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVIED 202
           WKGEEIILKKKLIKVPKKGV PEKSLEDAHRPTSNPLPPQSEAFTDYKN PISTRQVIED
Sbjct: 146 WKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIED 205

Query: 203 VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ 262
           VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ
Sbjct: 206 VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ 265

Query: 263 DEGLE 268
           DEGLE
Sbjct: 266 DEGLE 270

[Close]
BLAST of CcUC10G192760 vs. ExPASy TrEMBL
Match: A0A5A7V495 (Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004030 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.3e-122
Identity = 235/245 (95.92%), Postives = 240/245 (97.96%), Query Frame = 0 

Query: 23  KEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEERSERERKLFEE 82
           KEKRKALKKIKRKQLRKE+ALK+LQEEEARLNDPEEQRR++LMELEEEERSERERKLFEE
Sbjct: 26  KEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEE 85

Query: 83  RERAWMEAMELKKKKMAEEEEEEHQRRALEEESTARQAENENEFNGEDGWEYIEGPAEVI 142
           RERAWMEAMELKKKKMAEEEEEE QRRALEEEST RQAENENEFN EDGWEYIEGPAE+I
Sbjct: 86  RERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEII 145

Query: 143 WKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVIED 202
           WKGEEIILKKKLIKVPKKGV PEKSLEDAHRPTSNPLPPQSEAFTDYKN PISTRQVIED
Sbjct: 146 WKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIED 205

Query: 203 VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ 262
           VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ
Sbjct: 206 VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ 265

Query: 263 DEGLE 268
           DEGLE
Sbjct: 266 DEGLE 270

[Close]
BLAST of CcUC10G192760 vs. TAIR 10
Match: AT1G10320.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 268.9 bits (686), Expect = 4.5e-72
Identity = 161/280 (57.50%), Postives = 201/280 (71.79%), Query Frame = 0 

Query: 3   EPKLIGEEEEKPCTMEILCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRI 62
           E +   E +EK   M    RKEKRKA+KK+KRKQ+RKE+A K+ +E +A+LNDP EQ R+
Sbjct: 19  EKESFEESKEKAAEMS---RKEKRKAMKKLKRKQVRKEIAAKEREEAKAKLNDPAEQERL 78

Query: 63  RLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEE----EEEEHQRRALEEESTAR 122
           + +E E+  R E+E K FEE ERAW EAME+K+KK  EE    EEEE + + LEE     
Sbjct: 79  KAIEEEDARRREKELKDFEESERAWREAMEIKRKKEEEEEAKREEEERRWKDLEELRKLE 138

Query: 123 QAENENEFNGEDG-WEYI-EGPAEVIWKGEEIILKKKLIKVPKKGVA---------PEKS 182
            + N+     EDG +EYI EGP E+I++G EIILKK  ++VPKK V           E  
Sbjct: 139 ASGNDECGEDEDGEYEYIEEGPPEIIFQGNEIILKKNKVRVPKKSVVQVDGHESSNAEFV 198

Query: 183 LEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 242
           L+ + RPTSNPLPP SEA  +Y+N   S +Q++E VA +VPNFGTEQDK+HCPFHLKTGA
Sbjct: 199 LQISDRPTSNPLPPGSEASANYQNVS-SAQQILESVAQEVPNFGTEQDKAHCPFHLKTGA 258

Query: 243 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 268
           CRFGQRCSR+HFYP+KSCTLL+KNMYNGPG+ WEQDEGLE
Sbjct: 259 CRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWEQDEGLE 294

[Close]
BLAST of CcUC10G192760 vs. TAIR 10
Match: AT1G27650.1 (U2 snRNP auxiliary factor small subunit, putative )

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-11
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 210 FGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGL 259
           FGTE+D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P +
Sbjct: 9   FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 57

[Close]
BLAST of CcUC10G192760 vs. TAIR 10
Match: AT5G42820.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-11
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 210 FGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGL 259
           FGTE+D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P +
Sbjct: 9   FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 57

[Close]
BLAST of CcUC10G192760 vs. TAIR 10
Match: AT5G42820.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-11
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 210 FGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGL 259
           FGTE+D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P +
Sbjct: 9   FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 57

The following BLAST results are available for this feature:
BLAST of CcUC10G192760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038905963.11.2e-13596.65zinc finger CCCH domain-containing protein 5 isoform X3 [Benincasa hispida] >XP_... [more]
XP_038905961.16.7e-13496.63zinc finger CCCH domain-containing protein 5 isoform X2 [Benincasa hispida] >XP_... [more]
XP_008452219.13.8e-12990.61PREDICTED: zinc finger CCCH domain-containing protein 5 [Cucumis melo][more]
XP_031738076.17.2e-12891.82zinc finger CCCH domain-containing protein 5 isoform X3 [Cucumis sativus][more]
XP_004134259.17.2e-12891.82zinc finger CCCH domain-containing protein 5 isoform X2 [Cucumis sativus] >KAE86... [more]
BLAST of CcUC10G192760 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SY746.4e-7157.50Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q6YVX94.0e-4144.94Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa subsp. japonica OX... [more]
Q156967.0e-0932.02U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related prote... [more]
Q156952.2e-0731.82Putative U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-rela... [more]
Q623775.0e-0732.20U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related prote... [more]
BLAST of CcUC10G192760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BUH01.8e-12990.61zinc finger CCCH domain-containing protein 5 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
A0A6J1J5M63.8e-12788.85zinc finger CCCH domain-containing protein 5 OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1ERZ73.2e-12689.25zinc finger CCCH domain-containing protein 5 OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A5D3BNF01.3e-12295.92Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5A7V4951.3e-12295.92Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194... [more]
BLAST of CcUC10G192760 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G10320.14.5e-7257.50Zinc finger C-x8-C-x5-C-x3-H type family protein [more]
AT1G27650.11.5e-1157.14U2 snRNP auxiliary factor small subunit, putative [more]
AT5G42820.21.5e-1157.14Zinc finger C-x8-C-x5-C-x3-H type family protein [more]
AT5G42820.11.5e-1157.14Zinc finger C-x8-C-x5-C-x3-H type family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..123
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availableCOILSCoilCoilcoord: 29..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..125
NoneNo IPR availablePANTHERPTHR12620:SF4ZINC FINGER CCCH-TYPE, RNA BINDING MOTIF AND SERINE/ARGININE RICH 2coord: 22..268
IPR009145U2 auxiliary factor small subunitPRINTSPR01848U2AUXFACTORcoord: 238..258
score: 44.37
coord: 219..238
score: 70.0
IPR009145U2 auxiliary factor small subunitPANTHERPTHR12620U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNITcoord: 22..268
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 219..238
e-value: 3.7E-5
score: 23.5
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 213..241
score: 12.042086

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC10G192760.1CcUC10G192760.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0089701 U2AF complex
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding