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CcUC10G189940 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GACATTGAATCTCTTCTCTTCATCCATGCCCGTAAAATGCAATCTACTTGGCTCAACGATGATAGAAACTTCCAGTGGCGCCTTCACTCGAGCGACATACATCCCTGGACTTCCCACATTCTTCACTTTTCGATTGATCGTCACAGGGCCCATTTTCAGATCTATAACTGAGATCGAAGGGTAATTCAAATCCGTCACTTTGAACGATCCATCGCAAACGAAGGTCTTCTTGGATATTTTCTCGATTTGTGTTGCATTGTAGCCTCGAGCACACAAGAAATTGAGGTAATCGTCGATTGTAATGTCGTAAACGAGGCCAGGGTCCATCGCACTGTTTGGATTAACATGTCCAGCACCGTATGCCAATGGAGTTGCTTTGAGTCCTGTGGAGTCCATAATTGGATGTAAATTGTTGTCCGTTGTTTTGGCTGCAGAGATGAAATTGATTGAAAGTTTTTTGGTTAACAGAAAGAAACATCTAGGAGATAGACTTGTTTTTATGTTTTTGATTTGATTGTATGATTGAACCTGTCGTCATGATTGCAGACTTAATGGCGGCTGGACTCCATTTGGGATTTAGGATTTTGAGAAGGCCTACGATGCCAGCAACATGGGGACAGGCCATGGATGTGCCAGAATCTACCTTGAAAGGAGCTTGACGATTGTCCAATGGTAGTTCTGTCAATGGTACTCCATCGGGGTAAGCCGCCAGTATATTCACACCTGGAGCTGTTATATCAGGCTGATAAAACACAACTCATTAATATGATTATATTGAATATGGTTGTCTTCTTTTAGTTTAATTTCACCTTGATTTTAACTCAATACTTTTTAATTGAAACATTTCATAACACATTGGGAAAAAGAAAACCTTAAGGATTGACTCCTCTATTGTATTGGGGCCTCTTGATGAGAAATCAGCCATTACTGGGGATGGTTTGATTTCCAGTTCTGTCATCACAGAACCAATGTAAGCCGTTGGTGTCCTGATCAAAGTAGTTGTTATTATGACTTAAAATTGTAAAAGACAATATATTTATGAACAATCTTGAGAAGTGATAGGGAAGTATAGGGGAATACTTTGTAGAATTGATGTATTGGAAGATGGATATGCTGTCATTATAGGTTACATGGGAAGCTGGAAGGATATGTATATCAGTTAAAATTGCATTCCCACTTTCCTCATCGTTAACCAAAATCATTCCAACAGCCCCTGCCTTGGCAGCTACATAACCCTTAGACACTCTTGGAAGACCCCCTCGAAGGCAAATCACAATCTTCCCTGTTAACTTTATGGGATCAAGCGAGCCCTCCTCACAAACTTCCCTGCAATAATTCATTTAAAGTTTGTTTCGTGCATGGTTTAATTATTCATTCATGTTTTCTTTGATATATTGGTTAAAGGAATCGAGAAAATATATATACTCACGCATCACTATTGGAGACATTGTTGGCTTTTGCATCCACAGCATTGATTAGAGGGTAGAACTTGTTAAATGGCATTGCCTTAAAAGAAAAGCTTGTACCCTGGTCTAGGCAATCGAGAGATATTTAAGATAAAGAATATTGTTCATATTAAGCTTGTCTACTTTTGAATGTATTGAATATGAGTTACCTTGAGTTTCTTCTTGTTCCCCAGGACCACAAAATTAGTGAAATCCCTATTGATGGAACTAGCGCCAACAGTTATAATCCATGGCGACACATTTGATACGGTTCCAGGAGTTGGTCCGACATTCCCAGCTGAGCAAACAACAACAATACCTCGCTCAACTGCATGGAAAGCTCCTACAGAGAGTGCATCACTAAAAAACTCCTTTGGCTCTCCACCGACAGAAATCGAGATAACATCAACGCCATCGCCAATTGCAGCTTCAAAAGCAGCTAAGGTATTTGGGTCCAAACACTCGCCGCTTTCTTCTGGCCAACAAACCTTGTAGGACGCAACACGGGTTCGAGGGGAGCCACCTTTAATAGTTCCGTTCCCCATTCCCAAAACATTAGCTCCAGAGACAAAATTGCCACCAGCAATGGATAAAGTGTGGGTTCCATGGCCTACATTGTCTCTTGAAGAATTG GACATTGAATCTCTTCTCTTCATCCATGCCCGTAAAATGCAATCTACTTGGCTCAACGATGATAGAAACTTCCAGTGGCGCCTTCACTCGAGCGACATACATCCCTGGACTTCCCACATTCTTCACTTTTCGATTGATCGTCACAGGGCCCATTTTCAGATCTATAACTGAGATCGAAGGGACCACAAAATTAGTGAAATCCCTATTGATGGAACTAGCGCCAACAGTTATAATCCATGGCGACACATTTGATACGGTTCCAGGAGTTGGTCCGACATTCCCAGCTGAGCAAACAACAACAATACCTCGCTCAACTGCATGGAAAGCTCCTACAGAGAGTGCATCACTAAAAAACTCCTTTGGCTCTCCACCGACAGAAATCGAGATAACATCAACGCCATCGCCAATTGCAGCTTCAAAAGCAGCTAAGGACGCAACACGGGTTCGAGGGGAGCCACCTTTAATAGTTCCGTTCCCCATTCCCAAAACATTAGCTCCAGAGACAAAATTGCCACCAGCAATGGATAAAGTGTGGGTTCCATGGCCTACATTGTCTCTTGAAGAATTG ATGCCCGTAAAATGCAATCTACTTGGCTCAACGATGATAGAAACTTCCAGTGGCGCCTTCACTCGAGCGACATACATCCCTGGACTTCCCACATTCTTCACTTTTCGATTGATCGTCACAGGGCCCATTTTCAGATCTATAACTGAGATCGAAGGGACCACAAAATTAGTGAAATCCCTATTGATGGAACTAGCGCCAACAGTTATAATCCATGGCGACACATTTGATACGGTTCCAGGAGTTGGTCCGACATTCCCAGCTGAGCAAACAACAACAATACCTCGCTCAACTGCATGGAAAGCTCCTACAGAGAGTGCATCACTAAAAAACTCCTTTGGCTCTCCACCGACAGAAATCGAGATAACATCAACGCCATCGCCAATTGCAGCTTCAAAAGCAGCTAAGGACGCAACACGGGTTCGAGGGGAGCCACCTTTAATAGTTCCGTTCCCCATTCCCAAAACATTAGCTCCAGAGACAAAATTGCCACCAGCAATGGATAAAGTGTGGGTTCCATGGCCTACATTGTCTCTTGAAGAATTG MPVKCNLLGSTMIETSSGAFTRATYIPGLPTFFTFRLIVTGPIFRSITEIEGTTKLVKSLLMELAPTVIIHGDTFDTVPGVGPTFPAEQTTTIPRSTAWKAPTESASLKNSFGSPPTEIEITSTPSPIAASKAAKDATRVRGEPPLIVPFPIPKTLAPETKLPPAMDKVWVPWPTLSLEEL Homology
BLAST of CcUC10G189940 vs. NCBI nr
Match: KAB8086787.1 (hypothetical protein EE612_010319 [Oryza sativa] >BAS78045.1 Os02g0269400 [Oryza sativa Japonica Group]) HSP 1 Score: 70.5 bits (171), Expect = 1.7e-08 Identity = 54/138 (39.13%), Postives = 68/138 (49.28%), Query Frame = 0
BLAST of CcUC10G189940 vs. NCBI nr
Match: KAG5613519.1 (hypothetical protein H5410_024800 [Solanum commersonii]) HSP 1 Score: 68.2 bits (165), Expect = 8.5e-08 Identity = 43/84 (51.19%), Postives = 52/84 (61.90%), Query Frame = 0
BLAST of CcUC10G189940 vs. NCBI nr
Match: CAA7390606.1 (unnamed protein product [Spirodela intermedia]) HSP 1 Score: 66.2 bits (160), Expect = 3.2e-07 Identity = 42/82 (51.22%), Postives = 48/82 (58.54%), Query Frame = 0
BLAST of CcUC10G189940 vs. NCBI nr
Match: ERM97025.1 (hypothetical protein AMTR_s00122p00023550 [Amborella trichopoda]) HSP 1 Score: 65.5 bits (158), Expect = 5.5e-07 Identity = 45/116 (38.79%), Postives = 56/116 (48.28%), Query Frame = 0
BLAST of CcUC10G189940 vs. NCBI nr
Match: EXB78387.1 (hypothetical protein L484_003249 [Morus notabilis]) HSP 1 Score: 64.7 bits (156), Expect = 9.4e-07 Identity = 43/96 (44.79%), Postives = 51/96 (53.12%), Query Frame = 0
BLAST of CcUC10G189940 vs. ExPASy TrEMBL
Match: A0A0A9EXJ6 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.0e-11 Identity = 55/127 (43.31%), Postives = 65/127 (51.18%), Query Frame = 0
BLAST of CcUC10G189940 vs. ExPASy TrEMBL
Match: A0A0A9VGG3 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 8.9e-11 Identity = 54/121 (44.63%), Postives = 59/121 (48.76%), Query Frame = 0
BLAST of CcUC10G189940 vs. ExPASy TrEMBL
Match: A0A3Q7GC38 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 7.5e-10 Identity = 47/95 (49.47%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of CcUC10G189940 vs. ExPASy TrEMBL
Match: A0A0P0VHF2 (Os02g0269400 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0269400 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 8.3e-09 Identity = 54/138 (39.13%), Postives = 68/138 (49.28%), Query Frame = 0
BLAST of CcUC10G189940 vs. ExPASy TrEMBL
Match: A0A7I8K2R0 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_02002068 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.6e-07 Identity = 42/82 (51.22%), Postives = 48/82 (58.54%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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