CcUC10G189770 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC10G189770
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description4-hydroxy-4-methyl-2-oxoglutarate aldolase
LocationCicolChr10: 4753393 .. 4755785 (-)
RNA-Seq ExpressionCcUC10G189770
SyntenyCcUC10G189770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTTATCATTTCGAAATCAATCACAAGTCCATTGGCTTTTGAAGCCCAAGGGCGCCAGCGACGCTTATCGCTGTCGGGGCACAAGAACCAATGCTCTTGGTCTATTCTATTCGATCATCTTGATAAGCTTTCCGCCATTTCTAAAATTCTACGCTATGGAGTGGCTTAAATTGACTCAGCCTCCGTGTTTGATTATTCAATTGGATGGTTTCGGGCCTTAGCTTTCCACAGAACACCAGGGCTTCCGCTTTCAATTGGGTGAGTTTTCTTCATCATTTTGTCTTCATTTATTTCTTCAACATGGAATATTGTTTACTTTAGTTTCAATTAGTTCTAAGATGTGTTGAGGACTTGAAAATCATCCTTGGAAACTTGTTTCATCTGTACTGTGAGAACTTACCGGTGCGAGTTTTGCTGTGTGTATTTGAAATTGGGGTCTTATTTCTTCCTCATTGGCTAGGGATGCTGTTTCTTTTATGCCTTTATGCAAAGGGAGAAGTATTTAAACCTTCTTCCTTGAATTTGAGAAAGTTTTGTCACTATCAACTCTAGGAAGATGAAGCTTATTGGGCCTTGAAACATATACTTTAAACCATGGTTTCACTTGTACCATCCATATACATTGATGCTGAAGCCTTTTCTTGTCTGTCCATCAAGTGTTTAATCACAACAAACTTAGTGCAGGTTTGGGATGATAATTGAAGTAGTAATTTTTGAAAAAGAGATTTGGGTATCATTCATATTTTAAAATTATTATTTTTTTTTTTTTTTTTTTTTTTTTGAAGATCTGCTAGTGTCTGGGTAGTTTATGCACACTCCAATTAACCATACTGGATAATTTGTCTTATCCTACAACATTTTGGTGTCAAGGAAACTCGTGCAGTTGTAAAATTAATTTTTATACAATCGTGTTGATGTTTGGTTTCAAACTCTAAAAAGTGATCTTTATTTATTTAAAAGTGGTTTTGAATTATTATGTTTAATTGGTGATTTCCGGTCAATCATCCCATCAAGAATCATCTCTCAATTAATTAATGAAAAATCAGTTTAAAAGAATTTTAGATTTTTCTAAAATCAATTTCAACATTTACCAAAAATCAATACTCAAAAAAAAAAAAAAAAAGTGATTTTGGAGTGACAATAGTGATTTTGATAATGACAAGCGGCCAAAATCACTCCTAAACATAATTGTATGAATTTTGATATGACACAAACTGAATGCCATTTATCTCTTGTTATGATTCCATCTCACAGCACTATTAAACAACTCCTACTTTTGAGTTGTTACGACCAACTTTAGTTTAATAGATAGATTAAATTCTAGTTTGAGTTATCAACTTCCACAGTTATTTTTGCATTGGCCCATGAATTTTCAGATATCATACATATTAAACTCAACTTTCAAATTTTTTGTTTAAGTCTCTGAACTGTGCATTGCAAACTATTTTAGTCCATATCATTAAATTTATATTCTATTAATTACATAACAGAACTTAGATTTATTTGAAAATTGAACACCTAACCACTATATGTAGCTTGAGCTTCAAACATTTGTCTTTTCCAACATCTATTGATAATGTGCTTCCGATAAGTTTCTATTAACTAATTTGTTTTTAAAAGAATTAAGAATAAATAATAAAACTAAAACATATTTGAAAGTTCAAAACCAAAGTCGAATGAAGACTATTAGGATTTAAACATTTGGAAGTTCATTCTTTTAACAACAATGATTATTCTCATCTCCAATCTTCTCTTGCTTTGCTTCTAAAAGTGTGAACTCACCTTAAAAGAAGGAAATGTAACATTTACATTTTTCTGATCTTTCTTTGAAAGTTACTTCAAACCTATTATCTCAACTGTTGAAATATCCTTGCCAGCAGTGGAAGGCATGGCAGCTCCAGCAACAGCAGACGTTTGTGATGCAAATGCAGCACATGTCACAAACGGAGATCTCCGAGTACTGCAACCGGCATTTGAGATTTACGGGCAACGGCGAGCGTTTTCGGGACCGATAGTGACGGTCAAGGTATTTGAAGACAATGTTTTGGTGAGACAGCTTCTTGAAACCAAAGGTGAGGGGAGGGTTCTGGTGATAGATGGGAATGGAAGCAGAAGATGTGCATTGTTGGGAGGTAATCTGGGGCAGTTGGCTCAAAACAATGGGTGGGCTGGGATTGTTGTAAATGGTTGCATAAGAGATGTTGATGAGATCAATAATTGTGATATTGGTGTGAGAGCATTAGGGACTAATCCATTGAAGTCAAACAAGAAAGGGATGGGAGAAAAGCATGTGGTGGTTCAAATTGGTGGCACTCTGATTCATGAAGGAGAGTGGTTATATGCTGATAATGATGGCATTTTGGTGTCCAAATTTGAGTTGTCTGTTTGA

mRNA sequence

ATGGCCTTATCATTTCGAAATCAATCACAAGTCCATTGGCTTTTGAAGCCCAAGGGCGCCAGCGACGCTTATCGCTGTCGGGGCACAAGAACCAATGCTCTTGCCTCCGTGTTTGATTATTCAATTGGATGGTTTCGGGCCTTAGCTTTCCACAGAACACCAGGGCTTCCGCTTTCAATTGGTTACTTCAAACCTATTATCTCAACTGTTGAAATATCCTTGCCAGCAGTGGAAGGCATGGCAGCTCCAGCAACAGCAGACGTTTGTGATGCAAATGCAGCACATGTCACAAACGGAGATCTCCGAGTACTGCAACCGGCATTTGAGATTTACGGGCAACGGCGAGCGTTTTCGGGACCGATAGTGACGGTCAAGGTATTTGAAGACAATGTTTTGGTGAGACAGCTTCTTGAAACCAAAGGTGAGGGGAGGGTTCTGGTGATAGATGGGAATGGAAGCAGAAGATGTGCATTGTTGGGAGGTAATCTGGGGCAGTTGGCTCAAAACAATGGGTGGGCTGGGATTGTTGTAAATGGTTGCATAAGAGATGTTGATGAGATCAATAATTGTGATATTGGTGTGAGAGCATTAGGGACTAATCCATTGAAGTCAAACAAGAAAGGGATGGGAGAAAAGCATGTGGTGGTTCAAATTGGTGGCACTCTGATTCATGAAGGAGAGTGGTTATATGCTGATAATGATGGCATTTTGGTGTCCAAATTTGAGTTGTCTGTTTGA

Coding sequence (CDS)

ATGGCCTTATCATTTCGAAATCAATCACAAGTCCATTGGCTTTTGAAGCCCAAGGGCGCCAGCGACGCTTATCGCTGTCGGGGCACAAGAACCAATGCTCTTGCCTCCGTGTTTGATTATTCAATTGGATGGTTTCGGGCCTTAGCTTTCCACAGAACACCAGGGCTTCCGCTTTCAATTGGTTACTTCAAACCTATTATCTCAACTGTTGAAATATCCTTGCCAGCAGTGGAAGGCATGGCAGCTCCAGCAACAGCAGACGTTTGTGATGCAAATGCAGCACATGTCACAAACGGAGATCTCCGAGTACTGCAACCGGCATTTGAGATTTACGGGCAACGGCGAGCGTTTTCGGGACCGATAGTGACGGTCAAGGTATTTGAAGACAATGTTTTGGTGAGACAGCTTCTTGAAACCAAAGGTGAGGGGAGGGTTCTGGTGATAGATGGGAATGGAAGCAGAAGATGTGCATTGTTGGGAGGTAATCTGGGGCAGTTGGCTCAAAACAATGGGTGGGCTGGGATTGTTGTAAATGGTTGCATAAGAGATGTTGATGAGATCAATAATTGTGATATTGGTGTGAGAGCATTAGGGACTAATCCATTGAAGTCAAACAAGAAAGGGATGGGAGAAAAGCATGTGGTGGTTCAAATTGGTGGCACTCTGATTCATGAAGGAGAGTGGTTATATGCTGATAATGATGGCATTTTGGTGTCCAAATTTGAGTTGTCTGTTTGA

Protein sequence

MALSFRNQSQVHWLLKPKGASDAYRCRGTRTNALASVFDYSIGWFRALAFHRTPGLPLSIGYFKPIISTVEISLPAVEGMAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLETKGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGTNPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV
Homology
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BLAST of CcUC10G189770 vs. NCBI nr
Match: XP_008448991.1 (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo] >XP_008448992.1 PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo] >TYK19391.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 329.3 bits (843), Expect = 2.8e-86
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MAAPATADVCDANAAHVTNGDLRVLQP FEIYGQRRAFSG IVTVKVFEDNVLVRQLLET
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           NPLKSNKKGMG+KHVV+QIGGTLIHEGEWLYAD DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGDKHVVLQIGGTLIHEGEWLYADGDGILVSKFELSV 166

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BLAST of CcUC10G189770 vs. NCBI nr
Match: XP_004148273.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis sativus] >XP_004148274.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis sativus] >XP_011650460.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis sativus] >XP_031739443.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis sativus] >KGN55987.1 hypothetical protein Csa_009602 [Cucumis sativus])

HSP 1 Score: 328.6 bits (841), Expect = 4.7e-86
Identity = 160/166 (96.39%), Postives = 163/166 (98.19%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MAAPATADVCDANAAHVTNGDLRVLQP FEIYGQRRAFSG IVTVKVFEDNVLVRQLLET
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCD+GVRALG 
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           NPLKSNKKGMGEKHVV+QIGGTLIHEGEWLYAD+DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 166

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BLAST of CcUC10G189770 vs. NCBI nr
Match: XP_038903077.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Benincasa hispida] >XP_038903078.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Benincasa hispida])

HSP 1 Score: 325.5 bits (833), Expect = 4.0e-85
Identity = 158/166 (95.18%), Postives = 163/166 (98.19%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MAAPATADVCDANAAHVTNGDLRVLQP F+IYGQRRAFSG IVTVKVFEDNVLVRQLLET
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFDIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KGEGRVLVIDGNGSRRCALLGGNLGQL+ NNGWAGIVVNGCIRDVDEINNCDIGVRALGT
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLSHNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           NPLKSNKKGMGEKHVV++IGGTLIHEGEWLYAD+DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGEKHVVLEIGGTLIHEGEWLYADSDGILVSKFELSV 166

[Close]
BLAST of CcUC10G189770 vs. NCBI nr
Match: KAG6596786.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 325.1 bits (832), Expect = 5.2e-85
Identity = 158/177 (89.27%), Postives = 170/177 (96.05%), Query Frame = 0 

Query: 69  TVEISLPAVEGMAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFE 128
           TV+ISL AVE MAAPATAD+CDANAAHVT+GDLRVLQ  F+IYGQRRAFSGPIVTVKVFE
Sbjct: 3   TVDISLLAVESMAAPATADICDANAAHVTSGDLRVLQQKFKIYGQRRAFSGPIVTVKVFE 62

Query: 129 DNVLVRQLLETKGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEIN 188
           DNVLVRQLLE++GEGRVLVIDGNGSRRCALLGGNLGQ+AQ+ GWAG+VVNGCIRDVDEIN
Sbjct: 63  DNVLVRQLLESQGEGRVLVIDGNGSRRCALLGGNLGQVAQSMGWAGVVVNGCIRDVDEIN 122

Query: 189 NCDIGVRALGTNPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           NCD+GVRALGTNPLKSNKKG+GEKHV V IGGTLIHEGEWLYAD+DGILVSKFELSV
Sbjct: 123 NCDVGVRALGTNPLKSNKKGLGEKHVPVHIGGTLIHEGEWLYADSDGILVSKFELSV 179

[Close]
BLAST of CcUC10G189770 vs. NCBI nr
Match: XP_023540534.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita pepo subsp. pepo] >XP_023540535.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita pepo subsp. pepo] >KAG7028314.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.8 bits (800), Expect = 2.7e-81
Identity = 150/166 (90.36%), Postives = 161/166 (96.99%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MAAPATAD+CDANAAHVT+GDLRVLQ  F+IYGQRRAFSGPIVTVKVFEDNVLVRQLLE+
Sbjct: 1   MAAPATADICDANAAHVTSGDLRVLQQKFKIYGQRRAFSGPIVTVKVFEDNVLVRQLLES 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           +GEGRVLVIDGNGSRRCALLGGNLGQ+AQ+ GWAG+VVNGCIRDVDEINNCD+GVRALGT
Sbjct: 61  QGEGRVLVIDGNGSRRCALLGGNLGQVAQSMGWAGVVVNGCIRDVDEINNCDVGVRALGT 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           NPLKSNKKG+GEKHV V IGGTLIHEGEWLYAD+DGILVSKFELSV
Sbjct: 121 NPLKSNKKGLGEKHVPVHIGGTLIHEGEWLYADSDGILVSKFELSV 166

[Close]
BLAST of CcUC10G189770 vs. ExPASy Swiss-Prot
Match: Q9FH13 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX=3702 GN=At5g56260 PE=1 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.1e-72
Identity = 131/166 (78.92%), Postives = 147/166 (88.55%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MAA ATA+ CD+NA  ++NGDLR L P F+IYGQRR FSGPIVT+KVFEDNVLVR  LET
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KGEG VLVIDG GS RCAL+GGNLGQLAQNNGW+GIVVNGC+RDVDEIN+CD+GVRALG+
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           NPLKS KKG GEK+V V IGGTLI +GEWLYAD+DGIL+SK ELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

[Close]
BLAST of CcUC10G189770 vs. ExPASy Swiss-Prot
Match: Q9FFE0 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX=3702 GN=At5g16450 PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-62
Identity = 115/166 (69.28%), Postives = 136/166 (81.93%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MA   TA+VCDAN   + +G LR LQP F+IYG+R+ FSGP+VTVKVFEDN L+RQ +E 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KG GRVLV+DG GS+RCA+LGGN    AQNNGWAGIVVNGCIRDVDEIN CDIGVRAL +
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           +P+K++KKG+GE+ V V I GT I +GEWLYAD DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]
BLAST of CcUC10G189770 vs. ExPASy Swiss-Prot
Match: Q9M8R9 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX=3702 GN=At3g02770 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-61
Identity = 113/166 (68.07%), Postives = 134/166 (80.72%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MA   TA+VCDAN   + +G LR LQP F+IYG+R+ FSGP+VTVKVFEDN L+R  LE 
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KG GRVLV+DG GS RCA+LGGN    AQNNGWAGI+VNGCIRDVDEIN CDIGVRAL +
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           +P+K++KKG+GE+ V + I GT I +GEWLYAD DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]
BLAST of CcUC10G189770 vs. ExPASy Swiss-Prot
Match: Q46ZV6 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) OX=264198 GN=Reut_A1963 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.0e-51
Identity = 89/159 (55.97%), Postives = 121/159 (76.10%), Query Frame = 0 

Query: 85  TADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLETKGEGR 144
           T D+CDAN   + +G LRV+ P F  +G+++AF+GP  T+K+FEDN LVR+ LE+ G+GR
Sbjct: 5   TTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGR 64

Query: 145 VLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGTNPLKS 204
           VLV+DG GS RCAL+GGNLG LA+ NGW GI+VNGC+RD  E++ CDIG+RAL  +P KS
Sbjct: 65  VLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKS 124

Query: 205 NKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFEL 244
            K+G GE+ V VQ+ G ++  G W+Y D DG+LVS+ +L
Sbjct: 125 QKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKL 163

[Close]
BLAST of CcUC10G189770 vs. ExPASy Swiss-Prot
Match: Q0K9J4 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=H16_A2230 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.3e-50
Identity = 91/157 (57.96%), Postives = 115/157 (73.25%), Query Frame = 0 

Query: 83  PATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLETKGE 142
           P T D+CDA+   + +G LRV+ P F  +G++ AF+GP  T+KVFEDN LVR  LE  G+
Sbjct: 3   PVTTDLCDAHEDRLADGTLRVMAPVFRAFGKQGAFAGPAATLKVFEDNSLVRTALEAPGQ 62

Query: 143 GRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGTNPL 202
           GRVLVIDG GS RCAL+GGNLG LA+ NGW GIVVNGCIRD  E++ CDIG+RAL  +P 
Sbjct: 63  GRVLVIDGGGSLRCALVGGNLGLLAEKNGWVGIVVNGCIRDTAELDVCDIGIRALAVHPQ 122

Query: 203 KSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVS 240
           KS K+ +GE  V VQ+ G ++  G W+Y D DG+LVS
Sbjct: 123 KSQKRNVGESDVAVQMPGAVVRPGNWIYVDADGVLVS 159

[Close]
BLAST of CcUC10G189770 vs. ExPASy TrEMBL
Match: A0A1S3BKF1 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo OX=3656 GN=LOC103490998 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.3e-86
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MAAPATADVCDANAAHVTNGDLRVLQP FEIYGQRRAFSG IVTVKVFEDNVLVRQLLET
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           NPLKSNKKGMG+KHVV+QIGGTLIHEGEWLYAD DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGDKHVVLQIGGTLIHEGEWLYADGDGILVSKFELSV 166

[Close]
BLAST of CcUC10G189770 vs. ExPASy TrEMBL
Match: A0A5D3D743 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00240 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.3e-86
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MAAPATADVCDANAAHVTNGDLRVLQP FEIYGQRRAFSG IVTVKVFEDNVLVRQLLET
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           NPLKSNKKGMG+KHVV+QIGGTLIHEGEWLYAD DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGDKHVVLQIGGTLIHEGEWLYADGDGILVSKFELSV 166

[Close]
BLAST of CcUC10G189770 vs. ExPASy TrEMBL
Match: A0A0A0L5X9 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus OX=3659 GN=Csa_3G044520 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.3e-86
Identity = 160/166 (96.39%), Postives = 163/166 (98.19%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MAAPATADVCDANAAHVTNGDLRVLQP FEIYGQRRAFSG IVTVKVFEDNVLVRQLLET
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCD+GVRALG 
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           NPLKSNKKGMGEKHVV+QIGGTLIHEGEWLYAD+DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 166

[Close]
BLAST of CcUC10G189770 vs. ExPASy TrEMBL
Match: A0A6J1GE55 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita moschata OX=3662 GN=LOC111453129 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.7e-81
Identity = 149/166 (89.76%), Postives = 161/166 (96.99%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MAAPATAD+CDANAAHVT+GDLRVLQ  F++YGQRRAFSGPIVTVKVFEDNVLVRQLLE+
Sbjct: 1   MAAPATADICDANAAHVTSGDLRVLQQKFKVYGQRRAFSGPIVTVKVFEDNVLVRQLLES 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           +GEGRVLVIDGNGSRRCALLGGNLGQ+AQ+ GWAG+VVNGCIRDVDEINNCD+GVRALGT
Sbjct: 61  QGEGRVLVIDGNGSRRCALLGGNLGQVAQSMGWAGVVVNGCIRDVDEINNCDVGVRALGT 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           NPLKSNKKG+GEKHV V IGGTLIHEGEWLYAD+DGILVSKFELSV
Sbjct: 121 NPLKSNKKGLGEKHVPVHIGGTLIHEGEWLYADSDGILVSKFELSV 166

[Close]
BLAST of CcUC10G189770 vs. ExPASy TrEMBL
Match: A0A6J1CPD0 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Momordica charantia OX=3673 GN=LOC111013332 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.8e-81
Identity = 149/166 (89.76%), Postives = 158/166 (95.18%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MA+PATAD+CDANAAHV +GDLRVLQ  FEIYGQRRAFSGP+ TVKVFEDNVLVRQLLE+
Sbjct: 1   MASPATADICDANAAHVASGDLRVLQSVFEIYGQRRAFSGPVATVKVFEDNVLVRQLLES 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           +GEGRVLV+DGNGSRRCALLGGNLGQLAQN GWAGIVVNGCIRDVDEIN CD+GVRALG 
Sbjct: 61  QGEGRVLVVDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINVCDVGVRALGA 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           NPLKSNKKGMGEKHV VQIGGTLIHEGEWLYAD+DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGEKHVAVQIGGTLIHEGEWLYADSDGILVSKFELSV 166

[Close]
BLAST of CcUC10G189770 vs. TAIR 10
Match: AT5G56260.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 273.1 bits (697), Expect = 2.2e-73
Identity = 131/166 (78.92%), Postives = 147/166 (88.55%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MAA ATA+ CD+NA  ++NGDLR L P F+IYGQRR FSGPIVT+KVFEDNVLVR  LET
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KGEG VLVIDG GS RCAL+GGNLGQLAQNNGW+GIVVNGC+RDVDEIN+CD+GVRALG+
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           NPLKS KKG GEK+V V IGGTLI +GEWLYAD+DGIL+SK ELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

[Close]
BLAST of CcUC10G189770 vs. TAIR 10
Match: AT5G16450.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 241.1 bits (614), Expect = 9.2e-64
Identity = 115/166 (69.28%), Postives = 136/166 (81.93%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MA   TA+VCDAN   + +G LR LQP F+IYG+R+ FSGP+VTVKVFEDN L+RQ +E 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KG GRVLV+DG GS+RCA+LGGN    AQNNGWAGIVVNGCIRDVDEIN CDIGVRAL +
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           +P+K++KKG+GE+ V V I GT I +GEWLYAD DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]
BLAST of CcUC10G189770 vs. TAIR 10
Match: AT5G16450.2 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 241.1 bits (614), Expect = 9.2e-64
Identity = 115/166 (69.28%), Postives = 136/166 (81.93%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MA   TA+VCDAN   + +G LR LQP F+IYG+R+ FSGP+VTVKVFEDN L+RQ +E 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KG GRVLV+DG GS+RCA+LGGN    AQNNGWAGIVVNGCIRDVDEIN CDIGVRAL +
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           +P+K++KKG+GE+ V V I GT I +GEWLYAD DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]
BLAST of CcUC10G189770 vs. TAIR 10
Match: AT3G02770.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 238.0 bits (606), Expect = 7.8e-63
Identity = 113/166 (68.07%), Postives = 134/166 (80.72%), Query Frame = 0 

Query: 80  MAAPATADVCDANAAHVTNGDLRVLQPAFEIYGQRRAFSGPIVTVKVFEDNVLVRQLLET 139
           MA   TA+VCDAN   + +G LR LQP F+IYG+R+ FSGP+VTVKVFEDN L+R  LE 
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 140 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 199
           KG GRVLV+DG GS RCA+LGGN    AQNNGWAGI+VNGCIRDVDEIN CDIGVRAL +
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 200 NPLKSNKKGMGEKHVVVQIGGTLIHEGEWLYADNDGILVSKFELSV 246
           +P+K++KKG+GE+ V + I GT I +GEWLYAD DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

The following BLAST results are available for this feature:
BLAST of CcUC10G189770 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008448991.12.8e-8696.99PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo] ... [more]
XP_004148273.14.7e-8696.39putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis sativus] >XP_0041... [more]
XP_038903077.14.0e-8595.18putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Benincasa hispida] >XP_03... [more]
KAG6596786.15.2e-8589.27putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3, partial [Cucurbita argyro... [more]
XP_023540534.12.7e-8190.36putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita pepo subsp. pep... [more]
BLAST of CcUC10G189770 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FH133.1e-7278.92Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX... [more]
Q9FFE01.3e-6269.28Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX... [more]
Q9M8R91.1e-6168.07Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX... [more]
Q46ZV61.0e-5155.97Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensi... [more]
Q0K9J44.3e-5057.96Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus necator (stra... [more]
BLAST of CcUC10G189770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BKF11.3e-8696.994-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo OX=3656 GN=LOC1034909... [more]
A0A5D3D7431.3e-8696.994-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo var. makuwa OX=119469... [more]
A0A0A0L5X92.3e-8696.394-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus OX=3659 GN=Csa_3G0... [more]
A0A6J1GE551.7e-8189.764-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1CPD03.8e-8189.764-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Momordica charantia OX=3673 GN=LOC... [more]
BLAST of CcUC10G189770 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G56260.12.2e-7378.92Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase [more]
AT5G16450.19.2e-6469.28Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase [more]
AT5G16450.29.2e-6469.28Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase [more]
AT3G02770.17.8e-6368.07Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005493Ribonuclease E inhibitor RraA/RraA-like proteinPFAMPF03737RraA-likecoord: 85..238
e-value: 2.3E-46
score: 157.6
IPR005493Ribonuclease E inhibitor RraA/RraA-like proteinCDDcd16841RraA_familycoord: 86..239
e-value: 5.35174E-61
score: 186.896
NoneNo IPR availableGENE3D3.50.30.40coord: 80..245
e-value: 1.8E-51
score: 176.1
NoneNo IPR availablePANTHERPTHR33254:SF224-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASEcoord: 80..245
NoneNo IPR availablePANTHERPTHR332544-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 3-RELATEDcoord: 80..245
IPR010203Regulator of ribonuclease activity ATIGRFAMTIGR01935TIGR01935coord: 85..239
e-value: 1.9E-64
score: 214.0
IPR036704Ribonuclease E inhibitor RraA/RraA-like superfamilySUPERFAMILY89562RraA-likecoord: 84..243

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC10G189770.1CcUC10G189770.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0051252 regulation of RNA metabolic process
molecular_function GO:0047443 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008948 oxaloacetate decarboxylase activity
molecular_function GO:0008428 ribonuclease inhibitor activity