CcUC10G188200 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G188200
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	CicolChr10: 2416284 .. 2420486 (+)
RNA-Seq Expression	CcUC10G188200
Synteny	CcUC10G188200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAACCTTCCACTTTCACTCTTCTCTATCTTTGGCTTCTTCTGTTCTTCGTTTTAGATTATCGCTCTGCTTCAAGGTTTTCCAGCCATGGAGGTCGCCACTACTGCCTCCAGCTTCGCGCTTACCAAGCGAATATCGCCGTTAATTACTTCTTCCCATAATGGTAAATCGAACCGGGCCTTGTCCTTTTCGTCCTCCTCTCTCAGAACGGCTCCGCTTTCCACTAATTTTCTCATCCCATTCACCGCTGGAAGCGTCTCCGGGGATTTTGCCGGCGTGAAACTCCGGCCGTCTTCGCTTAATCCGGATTCGTTCCGTGGATCCAAGGGCAAACGGGGCGTTGTTACTATGGTAAATGCCTGAACTTATCTGCTCTTCCGATGTTATTGGGATATTGGTTTGAAGTTTTGTTGCTTGTTTGTTGTTTTAACTACTTGGGTTAACTAAATTGTAGTTTTTGAGTCCTCTTAGGTGAAATATTGCGATGTTGGTTTGAAATTTTGTTGCTTATTTGTTAGAAAAAAGAAACCTCTGAAGAGTGCTTCCCTTGTAATGTACAGCTGTTGATATGTTTTGGTGCAAATGAATCTTTCGTAACTTTCAAATGAAAGACTCAATCTCAAATAGGTCGGGAGATTATAATGGAGTCTAAAAAGCAGACCCTATTGGGTAAAGTTATTTGTGACTTTGACTACCTTTAGTGGATATGTGGGCTTGAATGAACTTACTCTTTTTTAAATATAAACGATGATTCTTAACAGTTCACGGCCTCCCTTAAACTCTAAAATGTTCTTTCCAGAATCACTCTCCATTCCTGCTGGCCTCTTGTGCCTTATCTACCTGATTTCTTTGAACAGGTTATTCCATTTTCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCTTATTTATACAAGAATCGAATTGTATACTTGGGCATGTCTCTTGTCCCTTCTGTCACAGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAGCAAAGCCTATTTATCTTTATATTAACTCCACGGGGACAACAAAGGTTAACTATGTTTTAAAGTTTTATGTAGATTAACTTTGTTTTGATCTCTCATTTTATCTAGCTTGAACTTTATGGTGATAGCTTGGTTTTTCCCCCTTTCTTTTTAGCTTTTTAATGATCATAATGTAAGCAACTGGCAGAGGCTTTTGTATTGTTAAATCACTTGCGCTAACTGTCTATGGTGATGCAAATAACTCAAGGAGTAAGAAAAGTTCTCAATTTTCATAGTTGTTCTAATAGTAAAGCAGCGCTCCAGCTTTTTTCTTGACCAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACCCATAATCCCTTCATCCTCCCCTTCCTGTTTTTACGCTCTCGTTCTTTTTTAAAGAAAATGTTTGTCAACTTCAAGTTAGCGCAGAAAAATGATTATTAACCTTGGGACCTTTTCCATTTAATAGTAGATCATAATGAATTGCTTGCATTTTCCAGGGTGGCGAGAAGTTGGGCTATGAGACTGAAGCATTTGCGATATATGATGTTATGAGGTTGTGATGTGAATGCTTATGTATAATTGGTTTGGTATTCTGTTCTTTAGAATCCCGTTCTTTTATTGGGCATTCAAGACATGTTGAGGACTTGTTTAATGTTCATCACTTGGTATTCTTTTTGACTGCAGGTATGTTAAACCTCCTATATTCACATTATGCGTCGGTAATGCCTGGGGAGAAGCAGCACTTCTTCTGGCAGCTGGTGCTCAGGGAAACCGATCTGCGTTGCCCTCGTCAACAATAATGATAAAGCAGGTATTCTATCAACAGATATCCTTACAATTATTTTCTCTCTACTCGTTTCCTAACTTCAGAAAGGTGTTAGTATTTTGCTTGGACTTGTCTCACACTACATGTAAGCTGGTCTTTAGAAATACTTTTGTGGAGTTATAGAATTCTTTTGTTTTTTCTCTTTCAATCTGCAGCCAATTGCAAGGTTTCAGGGTCAAGCAACAGACATTGAGCTTGCTAGAAGAGAAGTACGGAATGTGAAGGCAGAACTGGTAAGATCATGGTAGAAATTTGTCTACCGGATTTGCCTTCTCTTTATTCTCGTACTCTTGTCTTTGTTTTCTTCCTTCCTGAAATGAGAGGTAGGGATGTGCGTTTGCTAAGGTACACTGGAGTTTTCAATTGACTGGGATTTATTTTTGGATAAGAAACCAAAACCTTGTATAAAATAAAGATAGAGATGATAACCACTTGGGTTCAACTTCAAGCTATGGCCACAGCCTACCTATACGTTACGTTAGCAACCAAATGCAGTAGAGTTAAATGGTTGTCCTCTAAAAATTATCAGTATGTGACTGCATATAAGTTGGCTCAGACACTCACACATATAGAATATTTTCAGAAAAATAAAGACAAAGGTTATAGAAAGGGGAAGAACAGGGAGGTGCCTTCCTAGCTCAACTTAGGATTTACAGGCAGGAAGTTCCCTATTTAGATTACCAAGAAAGTAGGGTTAGTTACAACAATGCTGTCAAGAGAGGCACAAGAAGTGGCTACATAATTGAACAAACCAAAAAATCCTCTCAGCTTCTAGAACAGTGTTGAGAAGTTTTAGTTATTTCTAGCCATGAATTCCATGACAAGCTCACATTCCACCAAAGAACAGCAGCTTGGTTCAGGAGTGTACCATCAATGCCTTCAAAATTTGAAAAGAAGTAATAATTGGTGTATAGGGTTATTTTTAGAAAGTAGAAATTTTACATTGTTCCCTCTAAACAAGCATAGGTAAGTGAACTCACAGTTCTTTCCTTTTTAAAATCGATATTGAAGGTTACGCTTTATGCCAAGCATACTGGAAAGTCGACTGAGGAGATTGAAGCTGATATCAGGCGGCCAAAATATTTTAGTCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTACCTGAATTGCAAAGTGTACTAATTTATCATATATTATTGTGGCTGTGCATTAAATTGAATATCATATCATTTACTTTCATCAGGTACTATACAACGAAAGAGCAACCGAGGACCGGGGAGTTGTATCCGACCTGAAAAAGGCACAACTTATTTAGTGTAGAAAAATGTGGATTGGTAAAATAATACCAAGGTAAAGTTCAATTACAAATCACTGCAGAGATATAGCGGAAGTACTTCTACTTAATTAGTGATTATGCACTCCTTGTTCTGCTTTTTCATGGGCTTACATTAACTGTCAGTAGACTTGTAATTCGAGGACATGAACTGAATCTTATAAACCAAATCATCTAAAGAAACATTAACTACCCTCTCCTGTTCTAGCTTTTCTGTTGTAAAATTGTCAAAATCTTCATTTGGAAGTTCATAGCATCTAATACATTGTTCCTACTTTCTCAGATTGAAGTTTGTGCAAATATTGATATCTAAGAAGAAATCTGGAATCCACAAGCAGTCTTAGTCATGCACAGGAATTGATCTGTGAGTTTATTGCGAGCTAATCGACTTCAAGTATCTGAGAAACTTTCTGAATTATATTACAGCTCTAGAACAATGTTACAAAAAAGAAAACTGATGAGCATTATTGATGTTGTAGCATTCTGTTTTGCTCATCTTCAACCAAGAAACTCTTGCCTTTTATGTGCTCTTCTGCTGTATCTTAAATCTTTTCCCAATGTGCAGTGAAAATTCTTCCTTCTTGTGTAGAAGAACAATATTTTCAAAGCTTTAATTTATTAACTTGAACACATGGTTTATACGATGAATAAATATCAGTTATTGCTACAA

mRNA sequence

CACAAACCTTCCACTTTCACTCTTCTCTATCTTTGGCTTCTTCTGTTCTTCGTTTTAGATTATCGCTCTGCTTCAAGGTTTTCCAGCCATGGAGGTCGCCACTACTGCCTCCAGCTTCGCGCTTACCAAGCGAATATCGCCGTTAATTACTTCTTCCCATAATGGTAAATCGAACCGGGCCTTGTCCTTTTCGTCCTCCTCTCTCAGAACGGCTCCGCTTTCCACTAATTTTCTCATCCCATTCACCGCTGGAAGCGTCTCCGGGGATTTTGCCGGCGTGAAACTCCGGCCGTCTTCGCTTAATCCGGATTCGTTCCGTGGATCCAAGGGCAAACGGGGCGTTGTTACTATGGTTATTCCATTTTCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCTTATTTATACAAGAATCGAATTGTATACTTGGGCATGTCTCTTGTCCCTTCTGTCACAGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAGCAAAGCCTATTTATCTTTATATTAACTCCACGGGGACAACAAAGGGTGGCGAGAAGTTGGGCTATGAGACTGAAGCATTTGCGATATATGATGTTATGAGGTTGTATGTTAAACCTCCTATATTCACATTATGCGTCGGTAATGCCTGGGGAGAAGCAGCACTTCTTCTGGCAGCTGGTGCTCAGGGAAACCGATCTGCGTTGCCCTCGTCAACAATAATGATAAAGCAGCCAATTGCAAGGTTTCAGGGTCAAGCAACAGACATTGAGCTTGCTAGAAGAGAAGTACGGAATGTGAAGGCAGAACTGGTTACGCTTTATGCCAAGCATACTGGAAAGTCGACTGAGGAGATTGAAGCTGATATCAGGCGGCCAAAATATTTTAGTCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTACTATACAACGAAAGAGCAACCGAGGACCGGGGAGTTGTATCCGACCTGAAAAAGGCACAACTTATTTAGTGTAGAAAAATGTGGATTGGTAAAATAATACCAAGATTGAAGTTTGTGCAAATATTGATATCTAAGAAGAAATCTGGAATCCACAAGCAGTCTTAGTCATGCACAGGAATTGATCTGTGAGTTTATTGCGAGCTAATCGACTTCAAGTATCTGAGAAACTTTCTGAATTATATTACAGCTCTAGAACAATGTTACAAAAAAGAAAACTGATGAGCATTATTGATGTTGTAGCATTCTGTTTTGCTCATCTTCAACCAAGAAACTCTTGCCTTTTATGTGCTCTTCTGCTGTATCTTAAATCTTTTCCCAATGTGCAGTGAAAATTCTTCCTTCTTGTGTAGAAGAACAATATTTTCAAAGCTTTAATTTATTAACTTGAACACATGGTTTATACGATGAATAAATATCAGTTATTGCTACAA

Coding sequence (CDS)

ATGGAGGTCGCCACTACTGCCTCCAGCTTCGCGCTTACCAAGCGAATATCGCCGTTAATTACTTCTTCCCATAATGGTAAATCGAACCGGGCCTTGTCCTTTTCGTCCTCCTCTCTCAGAACGGCTCCGCTTTCCACTAATTTTCTCATCCCATTCACCGCTGGAAGCGTCTCCGGGGATTTTGCCGGCGTGAAACTCCGGCCGTCTTCGCTTAATCCGGATTCGTTCCGTGGATCCAAGGGCAAACGGGGCGTTGTTACTATGGTTATTCCATTTTCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCTTATTTATACAAGAATCGAATTGTATACTTGGGCATGTCTCTTGTCCCTTCTGTCACAGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAGCAAAGCCTATTTATCTTTATATTAACTCCACGGGGACAACAAAGGGTGGCGAGAAGTTGGGCTATGAGACTGAAGCATTTGCGATATATGATGTTATGAGGTTGTATGTTAAACCTCCTATATTCACATTATGCGTCGGTAATGCCTGGGGAGAAGCAGCACTTCTTCTGGCAGCTGGTGCTCAGGGAAACCGATCTGCGTTGCCCTCGTCAACAATAATGATAAAGCAGCCAATTGCAAGGTTTCAGGGTCAAGCAACAGACATTGAGCTTGCTAGAAGAGAAGTACGGAATGTGAAGGCAGAACTGGTTACGCTTTATGCCAAGCATACTGGAAAGTCGACTGAGGAGATTGAAGCTGATATCAGGCGGCCAAAATATTTTAGTCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTACTATACAACGAAAGAGCAACCGAGGACCGGGGAGTTGTATCCGACCTGAAAAAGGCACAACTTATTTAG

Protein sequence

MEVATTASSFALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVSGDFAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVRNVKAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLKKAQLI

Homology

[Close]

BLAST of CcUC10G188200 vs. NCBI nr
Match: XP_038902969.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 554.7 bits (1428), Expect = 5.0e-154
Identity = 290/305 (95.08%), Postives = 293/305 (96.07%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVSGD 60
           MEVATTASSFALTKRISPLITSSH+ KSNRALS SSSSLRT PLSTNFLIPF  GSVSGD
Sbjct: 1   MEVATTASSFALTKRISPLITSSHDRKSNRALSLSSSSLRTPPLSTNFLIPFAGGSVSGD 60

Query: 61  FAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+GVKLRPSSLN DS  GSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNTDSSPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYVKP 180
           LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMR YVKP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMR-YVKP 180

Query: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVRNV 240
           PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELAR+EVRNV
Sbjct: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARKEVRNV 240

Query: 241 KAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 300
           KAELV LYAKH GKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNER TEDRGVVSDLK
Sbjct: 241 KAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERTTEDRGVVSDLK 300

Query: 301 KAQLI 306
           KAQLI
Sbjct: 301 KAQLI 304

[Close]

BLAST of CcUC10G188200 vs. NCBI nr
Match: XP_022155521.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Momordica charantia])

HSP 1 Score: 553.9 bits (1426), Expect = 8.6e-154
Identity = 288/305 (94.43%), Postives = 293/305 (96.07%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVSGD 60
           MEVATTAS+FALTKRISP ITSSHN KSNRALSFSSSSLR  PLSTNFL PF  GSVSGD
Sbjct: 1   MEVATTASTFALTKRISPSITSSHNPKSNRALSFSSSSLRPTPLSTNFLAPFAGGSVSGD 60

Query: 61  FAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FAGVKLRPSSLNPDS RGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FAGVKLRPSSLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYVKP 180
           LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMR YVKP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMR-YVKP 180

Query: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVRNV 240
           PIFTLCVGNAWGEAALLLAAGA+GNRSALPSSTIM+KQPIARFQGQATDIELAR+EVRNV
Sbjct: 181 PIFTLCVGNAWGEAALLLAAGARGNRSALPSSTIMMKQPIARFQGQATDIELARKEVRNV 240

Query: 241 KAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 300
           KAELV LYAKH GKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNER+ EDRGVVSDLK
Sbjct: 241 KAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERSPEDRGVVSDLK 300

Query: 301 KAQLI 306
           KAQLI
Sbjct: 301 KAQLI 304

[Close]

BLAST of CcUC10G188200 vs. NCBI nr
Match: XP_008448778.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucumis melo] >KAA0041047.1 ATP-dependent Clp protease proteolytic subunit-related protein 4 [Cucumis melo var. makuwa] >TYK12057.1 ATP-dependent Clp protease proteolytic subunit-related protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 545.4 bits (1404), Expect = 3.1e-151
Identity = 282/305 (92.46%), Postives = 290/305 (95.08%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVSGD 60
           MEVATTASSFALTKRISPL  SS+ GKSNR LS SSSS+RTAPLSTNFLIPF  GSVSGD
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+GVKLRP SLNP+ F GSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYVKP 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMR YVKP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMR-YVKP 180

Query: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVRNV 240
           PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATD+ELAR+EVRNV
Sbjct: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVELARKEVRNV 240

Query: 241 KAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 300
           KAELV L+AKH GKSTEEIEADIRRPKYF+PSEAVEYGIIDKVLYNER TEDRGVVSDLK
Sbjct: 241 KAELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTEDRGVVSDLK 300

Query: 301 KAQLI 306
           KAQLI
Sbjct: 301 KAQLI 304

[Close]

BLAST of CcUC10G188200 vs. NCBI nr
Match: XP_004147236.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucumis sativus] >KGN55823.1 hypothetical protein Csa_011232 [Cucumis sativus])

HSP 1 Score: 545.0 bits (1403), Expect = 4.0e-151
Identity = 280/305 (91.80%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVSGD 60
           MEVATTASSFALTKRISPLITSSHNGKSNR LS SSSS+R APLSTNFLIPF  GSVSG+
Sbjct: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60

Query: 61  FAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+GVKLRPSSLNP+   GSKGKRGVVTMVIPF+RGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYVKP 180
           LVPSVTELILAEFLYLQYEDE KPIYLY+NSTGTTKGGEKLGYETEAFA+YDVM  YVKP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMS-YVKP 180

Query: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVRNV 240
           PIFTLCVGNAWGEAALLLAAGA GNRSALPSSTIMIK+PIARFQGQATD+E+AR+EVRNV
Sbjct: 181 PIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNV 240

Query: 241 KAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 300
           KAELV LYAKH GKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK
Sbjct: 241 KAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 300

Query: 301 KAQLI 306
           KAQLI
Sbjct: 301 KAQLI 304

[Close]

BLAST of CcUC10G188200 vs. NCBI nr
Match: XP_022934823.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 541.2 bits (1393), Expect = 5.8e-150
Identity = 274/305 (89.84%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVSGD 60
           MEVATTAS+F+LTKRISPLI SSH+ KS R +SFS SSLRT PLSTNFLIPF  GSVSGD
Sbjct: 1   MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+G+KLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYVKP 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTKGGEKLGYETEAFA+YDVMR Y+KP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMR-YIKP 180

Query: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVRNV 240
           PIFTLCVGNAWGEA+LLL+AGA+GNRSALPSSTIM+KQPIARFQGQATD+ELAR+E+RNV
Sbjct: 181 PIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNV 240

Query: 241 KAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 300
           K ELV LYAKH GKS EEIEADIRRPKYFSPSEAVEYGIIDKV+YNER+TEDRGVVSDLK
Sbjct: 241 KVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLK 300

Query: 301 KAQLI 306
           KAQLI
Sbjct: 301 KAQLI 304

[Close]

BLAST of CcUC10G188200 vs. ExPASy Swiss-Prot
Match: Q8LB10 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 3.7e-123
Identity = 235/307 (76.55%), Postives = 262/307 (85.34%), Query Frame = 0


Query: 1   MEV-ATTASSF-ALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVS 60
           MEV A TA+SF  L  R S +I SS     ++    SSSSLR A LS  FL P+T GS+S
Sbjct: 1   MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLR-ASLSNGFLSPYTGGSIS 60

Query: 61  GDFAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLG 120
            D  G KLR  SLNP +F  SK KRGVVTMVIPFS+GSA EQPPPDLASYL+KNRIVYLG
Sbjct: 61  SDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLG 120

Query: 121 MSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYV 180
           MSLVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTK GEKLGY+TEAFAIYDVM  YV
Sbjct: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMG-YV 180

Query: 181 KPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVR 240
           KPPIFTLCVGNAWGEAALLL AGA+GNRSALPSSTIMIKQPIARFQGQATD+E+AR+E++
Sbjct: 181 KPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIK 240

Query: 241 NVKAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSD 300
           ++K E+V LY+KH GKS E+IEAD++RPKYFSP+EAVEYGIIDKV+YNER ++DRGVVSD
Sbjct: 241 HIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSD 300

Query: 301 LKKAQLI 306
           LKKAQLI
Sbjct: 301 LKKAQLI 305

[Close]

BLAST of CcUC10G188200 vs. ExPASy Swiss-Prot
Match: Q9L4P4 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpR PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 8.6e-48
Identity = 97/205 (47.32%), Postives = 140/205 (68.29%), Query Frame = 0


Query: 91  PFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPS----------VTELILAEFLYLQYED 150
           P+    ++  PPPDL S L K RI+YLGM L  S          VTELI+A+ LYL++++
Sbjct: 11  PYYGDVSYRTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDN 70

Query: 151 EAKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMRLYVKPPIFTLCVGNAWGEAALLLA 210
             KPIY YINSTGT+   G+ +GYETEAFAI D MR Y+KPP+ T+C+G A G AA++L+
Sbjct: 71  PEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMR-YIKPPVHTICIGQAMGTAAMILS 130

Query: 211 AGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVRNVKAELVTLYAKHTGKSTEEI 270
            G  GNR++LP +TI++ QP    QGQA+DI++  +EV   K  ++ ++A++TG+  + +
Sbjct: 131 GGTPGNRASLPHATIVLNQPRTGAQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRL 190

Query: 271 EADIRRPKYFSPSEAVEYGIIDKVL 285
             D  R  Y +P++AVEYG+ID+VL
Sbjct: 191 ARDTDRMLYMTPAQAVEYGLIDRVL 214

[Close]

BLAST of CcUC10G188200 vs. ExPASy Swiss-Prot
Match: P74466 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpR PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 8.9e-45
Identity = 94/199 (47.24%), Postives = 139/199 (69.85%), Query Frame = 0


Query: 97  AWEQPPPDLASYLYKNRIVYLGMSLVPS----------VTELILAEFLYLQYEDEAKPIY 156
           A++ PPPDL S L K RIVYLGM L  S          VT+LI+A+ LYLQ++D  KPIY
Sbjct: 15  AFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIY 74

Query: 157 LYINSTGTT-KGGEKLGYETEAFAIYDVMRLYVKPPIFTLCVGNAWGEAALLLAAGAQGN 216
            YINSTGT+   G+ +G+ETEAFAI D +  Y+KPP+ T+C+G A G AA++L++G +G 
Sbjct: 75  FYINSTGTSWYTGDAVGFETEAFAICDTLN-YIKPPVHTICIGQAMGTAAMILSSGTKGY 134

Query: 217 RSALPSSTIMIKQPIARFQGQATDIELARREVRNVKAELVTLYAKHTGKSTEEIEADIRR 276
           R++LP +TI++ Q     QGQATDI++  +EV + K  ++ + + +TG++ E++  D+ R
Sbjct: 135 RASLPHATIVLNQNRTGAQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDR 194

Query: 277 PKYFSPSEAVEYGIIDKVL 285
             Y +P++A EYG+ID+VL
Sbjct: 195 TFYLTPAQAKEYGLIDRVL 212

[Close]

BLAST of CcUC10G188200 vs. ExPASy Swiss-Prot
Match: Q7NEW1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 8.3e-43
Identity = 95/193 (49.22%), Postives = 125/193 (64.77%), Query Frame = 0


Query: 92  FSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINS 151
           +S    +  PPPDL S L   RIVYLG  +   V EL++A+ LYL+ ED AKPI +YINS
Sbjct: 16  YSGDYGFRTPPPDLPSLLLNERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINS 75

Query: 152 TGTTKGGEKLGYETEAFAIYDVMRLYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPS 211
            G        G+ET AFA+YD MR +V+ PI T+C+G A G +ALL+AAG +G R +LP+
Sbjct: 76  PGVA------GFETSAFAVYDTMR-HVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPN 135

Query: 212 STIMIKQPIARFQGQATDIELARREVRNVKAELVTLYAKHTGKSTEEIEADIRRPKYFSP 271
           S I++ QP    +GQATDI +  +E+   K  L  L + HTGK+ E+I+ D  R  Y SP
Sbjct: 136 SRIILYQPYGGARGQATDINIRAQELLTTKRTLNQLLSIHTGKTVEQIDKDTERLFYMSP 195

Query: 272 SEAVEYGIIDKVL 285
            EAV YG+IDKVL
Sbjct: 196 QEAVSYGLIDKVL 201

[Close]

BLAST of CcUC10G188200 vs. ExPASy Swiss-Prot
Match: Q8L770 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.5e-41
Identity = 91/188 (48.40%), Postives = 127/188 (67.55%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D  +PIY+YINSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAIYDVMRLYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQP 220
            +G E+E FAIYD + + +K  + T+CVG A G+A LLL+AG +G R  +P +  MI+QP
Sbjct: 178 TVGMESEGFAIYDSL-MQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQP 237

Query: 221 IARFQG--QATDIELARREVRNVKAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEY 280
                G   A+D+ +  +EV   +  LV L +KHTG S E +   +RRP Y    +A E+
Sbjct: 238 RVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEF 297

Query: 281 GIIDKVLY 286
           G+ID++L+
Sbjct: 298 GVIDRILW 304

[Close]

BLAST of CcUC10G188200 vs. ExPASy TrEMBL
Match: A0A6J1DRW9 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111022646 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.2e-154
Identity = 288/305 (94.43%), Postives = 293/305 (96.07%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVSGD 60
           MEVATTAS+FALTKRISP ITSSHN KSNRALSFSSSSLR  PLSTNFL PF  GSVSGD
Sbjct: 1   MEVATTASTFALTKRISPSITSSHNPKSNRALSFSSSSLRPTPLSTNFLAPFAGGSVSGD 60

Query: 61  FAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FAGVKLRPSSLNPDS RGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FAGVKLRPSSLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYVKP 180
           LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMR YVKP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMR-YVKP 180

Query: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVRNV 240
           PIFTLCVGNAWGEAALLLAAGA+GNRSALPSSTIM+KQPIARFQGQATDIELAR+EVRNV
Sbjct: 181 PIFTLCVGNAWGEAALLLAAGARGNRSALPSSTIMMKQPIARFQGQATDIELARKEVRNV 240

Query: 241 KAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 300
           KAELV LYAKH GKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNER+ EDRGVVSDLK
Sbjct: 241 KAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERSPEDRGVVSDLK 300

Query: 301 KAQLI 306
           KAQLI
Sbjct: 301 KAQLI 304

[Close]

BLAST of CcUC10G188200 vs. ExPASy TrEMBL
Match: A0A5A7THF6 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00710 PE=3 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.5e-151
Identity = 282/305 (92.46%), Postives = 290/305 (95.08%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVSGD 60
           MEVATTASSFALTKRISPL  SS+ GKSNR LS SSSS+RTAPLSTNFLIPF  GSVSGD
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+GVKLRP SLNP+ F GSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYVKP 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMR YVKP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMR-YVKP 180

Query: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVRNV 240
           PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATD+ELAR+EVRNV
Sbjct: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVELARKEVRNV 240

Query: 241 KAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 300
           KAELV L+AKH GKSTEEIEADIRRPKYF+PSEAVEYGIIDKVLYNER TEDRGVVSDLK
Sbjct: 241 KAELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTEDRGVVSDLK 300

Query: 301 KAQLI 306
           KAQLI
Sbjct: 301 KAQLI 304

[Close]

BLAST of CcUC10G188200 vs. ExPASy TrEMBL
Match: A0A1S3BJW8 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490843 PE=3 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.5e-151
Identity = 282/305 (92.46%), Postives = 290/305 (95.08%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVSGD 60
           MEVATTASSFALTKRISPL  SS+ GKSNR LS SSSS+RTAPLSTNFLIPF  GSVSGD
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+GVKLRP SLNP+ F GSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYVKP 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMR YVKP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMR-YVKP 180

Query: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVRNV 240
           PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATD+ELAR+EVRNV
Sbjct: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVELARKEVRNV 240

Query: 241 KAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 300
           KAELV L+AKH GKSTEEIEADIRRPKYF+PSEAVEYGIIDKVLYNER TEDRGVVSDLK
Sbjct: 241 KAELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTEDRGVVSDLK 300

Query: 301 KAQLI 306
           KAQLI
Sbjct: 301 KAQLI 304

[Close]

BLAST of CcUC10G188200 vs. ExPASy TrEMBL
Match: A0A0A0L232 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_3G017170 PE=3 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 1.9e-151
Identity = 280/305 (91.80%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVSGD 60
           MEVATTASSFALTKRISPLITSSHNGKSNR LS SSSS+R APLSTNFLIPF  GSVSG+
Sbjct: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60

Query: 61  FAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+GVKLRPSSLNP+   GSKGKRGVVTMVIPF+RGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYVKP 180
           LVPSVTELILAEFLYLQYEDE KPIYLY+NSTGTTKGGEKLGYETEAFA+YDVM  YVKP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMS-YVKP 180

Query: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVRNV 240
           PIFTLCVGNAWGEAALLLAAGA GNRSALPSSTIMIK+PIARFQGQATD+E+AR+EVRNV
Sbjct: 181 PIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNV 240

Query: 241 KAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 300
           KAELV LYAKH GKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK
Sbjct: 241 KAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 300

Query: 301 KAQLI 306
           KAQLI
Sbjct: 301 KAQLI 304

[Close]

BLAST of CcUC10G188200 vs. ExPASy TrEMBL
Match: A0A6J1F8U0 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111441877 PE=3 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 2.8e-150
Identity = 274/305 (89.84%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MEVATTASSFALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVSGD 60
           MEVATTAS+F+LTKRISPLI SSH+ KS R +SFS SSLRT PLSTNFLIPF  GSVSGD
Sbjct: 1   MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+G+KLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYVKP 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTKGGEKLGYETEAFA+YDVMR Y+KP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMR-YIKP 180

Query: 181 PIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVRNV 240
           PIFTLCVGNAWGEA+LLL+AGA+GNRSALPSSTIM+KQPIARFQGQATD+ELAR+E+RNV
Sbjct: 181 PIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNV 240

Query: 241 KAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 300
           K ELV LYAKH GKS EEIEADIRRPKYFSPSEAVEYGIIDKV+YNER+TEDRGVVSDLK
Sbjct: 241 KVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLK 300

Query: 301 KAQLI 306
           KAQLI
Sbjct: 301 KAQLI 304

[Close]

BLAST of CcUC10G188200 vs. TAIR 10
Match: AT4G17040.1 (CLP protease R subunit 4 )

HSP 1 Score: 442.6 bits (1137), Expect = 2.6e-124
Identity = 235/307 (76.55%), Postives = 262/307 (85.34%), Query Frame = 0


Query: 1   MEV-ATTASSF-ALTKRISPLITSSHNGKSNRALSFSSSSLRTAPLSTNFLIPFTAGSVS 60
           MEV A TA+SF  L  R S +I SS     ++    SSSSLR A LS  FL P+T GS+S
Sbjct: 1   MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLR-ASLSNGFLSPYTGGSIS 60

Query: 61  GDFAGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLG 120
            D  G KLR  SLNP +F  SK KRGVVTMVIPFS+GSA EQPPPDLASYL+KNRIVYLG
Sbjct: 61  SDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLG 120

Query: 121 MSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRLYV 180
           MSLVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTK GEKLGY+TEAFAIYDVM  YV
Sbjct: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMG-YV 180

Query: 181 KPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIELARREVR 240
           KPPIFTLCVGNAWGEAALLL AGA+GNRSALPSSTIMIKQPIARFQGQATD+E+AR+E++
Sbjct: 181 KPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIK 240

Query: 241 NVKAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSD 300
           ++K E+V LY+KH GKS E+IEAD++RPKYFSP+EAVEYGIIDKV+YNER ++DRGVVSD
Sbjct: 241 HIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSD 300

Query: 301 LKKAQLI 306
           LKKAQLI
Sbjct: 301 LKKAQLI 305

[Close]

BLAST of CcUC10G188200 vs. TAIR 10
Match: AT1G09130.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 170.2 bits (430), Expect = 2.5e-42
Identity = 91/188 (48.40%), Postives = 127/188 (67.55%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D  +PIY+YINSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAIYDVMRLYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQP 220
            +G E+E FAIYD + + +K  + T+CVG A G+A LLL+AG +G R  +P +  MI+QP
Sbjct: 178 TVGMESEGFAIYDSL-MQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQP 237

Query: 221 IARFQG--QATDIELARREVRNVKAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEY 280
                G   A+D+ +  +EV   +  LV L +KHTG S E +   +RRP Y    +A E+
Sbjct: 238 RVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEF 297

Query: 281 GIIDKVLY 286
           G+ID++L+
Sbjct: 298 GVIDRILW 304

[Close]

BLAST of CcUC10G188200 vs. TAIR 10
Match: AT1G09130.2 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 170.2 bits (430), Expect = 2.5e-42
Identity = 91/188 (48.40%), Postives = 127/188 (67.55%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D  +PIY+YINSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAIYDVMRLYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQP 220
            +G E+E FAIYD + + +K  + T+CVG A G+A LLL+AG +G R  +P +  MI+QP
Sbjct: 178 TVGMESEGFAIYDSL-MQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQP 237

Query: 221 IARFQG--QATDIELARREVRNVKAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEY 280
                G   A+D+ +  +EV   +  LV L +KHTG S E +   +RRP Y    +A E+
Sbjct: 238 RVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEF 297

Query: 281 GIIDKVLY 286
           G+ID++L+
Sbjct: 298 GVIDRILW 304

[Close]

BLAST of CcUC10G188200 vs. TAIR 10
Match: AT1G09130.3 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 170.2 bits (430), Expect = 2.5e-42
Identity = 91/188 (48.40%), Postives = 127/188 (67.55%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D  +PIY+YINSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAIYDVMRLYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQP 220
            +G E+E FAIYD + + +K  + T+CVG A G+A LLL+AG +G R  +P +  MI+QP
Sbjct: 178 TVGMESEGFAIYDSL-MQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQP 237

Query: 221 IARFQG--QATDIELARREVRNVKAELVTLYAKHTGKSTEEIEADIRRPKYFSPSEAVEY 280
                G   A+D+ +  +EV   +  LV L +KHTG S E +   +RRP Y    +A E+
Sbjct: 238 RVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEF 297

Query: 281 GIIDKVLY 286
           G+ID++L+
Sbjct: 298 GVIDRILW 304

[Close]

BLAST of CcUC10G188200 vs. TAIR 10
Match: AT1G49970.1 (CLP protease proteolytic subunit 1 )

HSP 1 Score: 154.5 bits (389), Expect = 1.4e-37
Identity = 88/194 (45.36%), Postives = 123/194 (63.40%), Query Frame = 0


Query: 95  GSAWEQP---PPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINS 154
           G   E+P   PPDL S L   RI YLGM +VP+VTEL++A+F++L Y++  KPIYLYINS
Sbjct: 159 GGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINS 218

Query: 155 TGT-TKGGEKLGYETEAFAIYDVMRLYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALP 214
            GT  +  E +G ETEA+AI D +  Y K  ++T+  G A+G+AA+LL+ G +G R+  P
Sbjct: 219 PGTQNEKMETVGSETEAYAIADTIS-YCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQP 278

Query: 215 -SSTIMIKQPIARFQGQATDIELARREVRNVKAELVTLYAKHTGKSTEEIEADIRRPKYF 274
            SST +    + R  G A D+ +  +E+       + L AK TGKS E+I  DI+RPKY 
Sbjct: 279 HSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYL 338

Query: 275 SPSEAVEYGIIDKV 284
               A++YGI DK+
Sbjct: 339 QAQAAIDYGIADKI 351

The following BLAST results are available for this feature:

BLAST of CcUC10G188200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902969.1	5.0e-154	95.08	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
XP_022155521.1	8.6e-154	94.43	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
XP_008448778.1	3.1e-151	92.46	PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, chl...	[more]
XP_004147236.1	4.0e-151	91.80	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
XP_022934823.1	5.8e-150	89.84	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]

BLAST of CcUC10G188200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB10	3.7e-123	76.55	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
Q9L4P4	8.6e-48	47.32	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus el...	[more]
P74466	8.9e-45	47.24	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp...	[more]
Q7NEW1	8.3e-43	49.22	ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus (strai...	[more]
Q8L770	3.5e-41	48.40	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]

BLAST of CcUC10G188200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DRW9	4.2e-154	94.43	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A5A7THF6	1.5e-151	92.46	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BJW8	1.5e-151	92.46	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0L232	1.9e-151	91.80	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1F8U0	2.8e-150	89.84	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of CcUC10G188200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17040.1	2.6e-124	76.55	CLP protease R subunit 4	[more]
AT1G09130.1	2.5e-42	48.40	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.2	2.5e-42	48.40	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.3	2.5e-42	48.40	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G49970.1	1.4e-37	45.36	CLP protease proteolytic subunit 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 230..250
None	No IPR available	GENE3D	3.90.226.10		coord: 76..292 e-value: 1.2E-65 score: 223.0
None	No IPR available	PANTHER	PTHR10381:SF65	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 14..304
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 262..281 score: 44.62 coord: 104..119 score: 40.62 coord: 205..224 score: 42.75 coord: 144..164 score: 33.93 coord: 184..201 score: 48.06
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 104..283 e-value: 4.24223E-71 score: 215.768
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 104..285 e-value: 3.3E-50 score: 170.5
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 14..304
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 99..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G188200.1	CcUC10G188200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity