Homology
BLAST of CcUC10G187800 vs. NCBI nr
Match:
XP_038906217.1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Benincasa hispida])
HSP 1 Score: 1364.7 bits (3531), Expect = 0.0e+00
Identity = 679/711 (95.50%), Postives = 700/711 (98.45%), Query Frame = 0
Query: 1 MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNP 60
MAAPLSSSLDLNLKPT FFTSPL R +FTKRLTV+C +SSK PR+ASPISSES DNKNP
Sbjct: 1 MAAPLSSSLDLNLKPT--FFTSPLRRKNFTKRLTVIC-TSSKPPRKASPISSESIDNKNP 60
Query: 61 SLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMR 120
SLSEQLKNLSTTTL+NAPND++HLLSKPKSTWVNPTKPKRSVLSL RQKRSSYSYNP+MR
Sbjct: 61 SLSEQLKNLSTTTLSNAPNDESHLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR 120
Query: 121 DLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
DLKSFAHKLNACDSSDEA+FMAALEEIPHPPTKENALL+LNSLRPWQKTHLFFNWIKTQN
Sbjct: 121 DLKSFAHKLNACDSSDEAAFMAALEEIPHPPTKENALLVLNSLRPWQKTHLFFNWIKTQN 180
Query: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKA 240
LFPMETIFYNVAMKSLRYGRQFQL+EDLANEMI+TGIELDNITYSTIITCAKKCSRFDKA
Sbjct: 181 LFPMETIFYNVAMKSLRYGRQFQLVEDLANEMISTGIELDNITYSTIITCAKKCSRFDKA 240
Query: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKM 300
VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVL+LYERGRASGWKPDPFTFSVLGKM
Sbjct: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPFTFSVLGKM 300
Query: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN
Sbjct: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
Query: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE
Sbjct: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
Query: 421 EMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
EMKKSE SRPDSWSYTAMLNIHGSGGNVKRSMELFEEML+LGVEINVMCCTCLIQCLGKS
Sbjct: 421 EMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKS 480
Query: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVN 540
GRID+LVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDI+KVFTCLQQA+PKLVAFVN
Sbjct: 481 GRIDELVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQADPKLVAFVN 540
Query: 541 LLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
LLQQNDITFEVVK+EFRNIL ETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL
Sbjct: 541 LLQQNDITFEVVKNEFRNILGETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
Query: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRF 660
YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGAGTH+F
Sbjct: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHKF 660
Query: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA
Sbjct: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 708
BLAST of CcUC10G187800 vs. NCBI nr
Match:
XP_008448710.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis melo] >KAA0053056.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK11511.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1342.8 bits (3474), Expect = 0.0e+00
Identity = 667/711 (93.81%), Postives = 692/711 (97.33%), Query Frame = 0
Query: 1 MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNP 60
MAAPLSSSLD LKPTPIFFTS L R KRLT+LC SSSKSPR+ S ISSES DNKNP
Sbjct: 1 MAAPLSSSLDFKLKPTPIFFTSLLRRKYVNKRLTLLC-SSSKSPRKPSSISSESIDNKNP 60
Query: 61 SLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMR 120
SLS+QLKNLSTTTL+NAPND+T LLSKPKSTWVNPTKPKRSVLSL RQKRSSYSYNP+MR
Sbjct: 61 SLSDQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR 120
Query: 121 DLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
DLKSFAHKLNACDSSDEASF+AALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN
Sbjct: 121 DLKSFAHKLNACDSSDEASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
Query: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKA 240
LFPMETIFYNVAMKSLRYGRQFQLIEDLAN+M++TGIELDNITYSTIITCAKKCSRFDKA
Sbjct: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANDMVSTGIELDNITYSTIITCAKKCSRFDKA 240
Query: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKM 300
+EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVL+LYERGRASGWKPDP+TFSVLGKM
Sbjct: 241 MEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPYTFSVLGKM 300
Query: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
FGEAGDYDGIMYVLQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN
Sbjct: 301 FGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
Query: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE
Sbjct: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
Query: 421 EMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
EMKKS+ SRPDSWSYTAMLNI+GSGGNVKRSMELFEEML+LGVEINVMCCTCLIQCLGKS
Sbjct: 421 EMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKS 480
Query: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVN 540
GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDI+KVFTCLQQANPKLV+FVN
Sbjct: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQANPKLVSFVN 540
Query: 541 LLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
LLQQN ITFEV+K+EFRNILSETA+EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL
Sbjct: 541 LLQQNSITFEVIKNEFRNILSETASEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
Query: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRF 660
YPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQR+E LPELLSAQTGAGTHRF
Sbjct: 601 YPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRKEALPELLSAQTGAGTHRF 660
Query: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSV ATA
Sbjct: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVPATA 710
BLAST of CcUC10G187800 vs. NCBI nr
Match:
XP_004148730.1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis sativus] >KGN55781.1 hypothetical protein Csa_011464 [Cucumis sativus])
HSP 1 Score: 1342.4 bits (3473), Expect = 0.0e+00
Identity = 666/711 (93.67%), Postives = 691/711 (97.19%), Query Frame = 0
Query: 1 MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNP 60
MA PLSSSLDL LKPTPIFFTSPL R + TKRLT+LC SSSKSPR+ S +SS+S DNKNP
Sbjct: 1 MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLC-SSSKSPRKPSSVSSQSVDNKNP 60
Query: 61 SLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMR 120
SLSEQLKNLSTTTL+NAPND+T LLSKPKSTWVNPTKPKRSVLSL RQKRSSYSYNP+MR
Sbjct: 61 SLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR 120
Query: 121 DLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
DLKSFAHKLNACDSSD+ASF+AALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK+QN
Sbjct: 121 DLKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQN 180
Query: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKA 240
LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMI+ GIELDNITYSTIITCAKKCSRFDKA
Sbjct: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKA 240
Query: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKM 300
+EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVL+LYERGRASGW PDP+TFSVLGKM
Sbjct: 241 MEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKM 300
Query: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
FGEAGDYDGIMYVLQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN
Sbjct: 301 FGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
Query: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAE LFE
Sbjct: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFE 420
Query: 421 EMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
EMKKS+ SRPDSWSYTAMLNI+GSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS
Sbjct: 421 EMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
Query: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVN 540
GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSV+SLC NSEDI+KVFTCLQQANPKLV+F+N
Sbjct: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFIN 540
Query: 541 LLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
LLQQNDITFEVVK+EFRNIL ETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL
Sbjct: 541 LLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
Query: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRF 660
YPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGAGTHRF
Sbjct: 601 YPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRF 660
Query: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA
Sbjct: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 710
BLAST of CcUC10G187800 vs. NCBI nr
Match:
KAG7015666.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1287.7 bits (3331), Expect = 0.0e+00
Identity = 641/714 (89.78%), Postives = 678/714 (94.96%), Query Frame = 0
Query: 1 MAAPLSSSLD--LNLKPT-PIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDN 60
MAAPLSSSLD L LKPT P+FFTSPL RN+FTKR TVLC+SSSKSPR STD
Sbjct: 1 MAAPLSSSLDIKLKLKPTPPLFFTSPLRRNNFTKRFTVLCTSSSKSPR--------STDK 60
Query: 61 KNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNP 120
KNPSLSEQLK+LST+TL+NA ND++HLLS PKS WVNPTKPKRSVLSL RQKRSSYSYNP
Sbjct: 61 KNPSLSEQLKDLSTSTLSNASNDESHLLSNPKSIWVNPTKPKRSVLSLQRQKRSSYSYNP 120
Query: 121 QMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK 180
+MR+LK+FAHKLNA DSS EA+FMA L+EIPHPPTKENALLILNSL+PWQKTHLFFNWIK
Sbjct: 121 KMRELKTFAHKLNASDSS-EAAFMAVLKEIPHPPTKENALLILNSLKPWQKTHLFFNWIK 180
Query: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRF 240
TQNLFPMETIFYNVAMKSLRYGRQFQLIE+LANEMI TGIELDNITYSTIITCAKKCSRF
Sbjct: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEELANEMINTGIELDNITYSTIITCAKKCSRF 240
Query: 241 DKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVL 300
DKA+EWFERMY+TGLMPDEVTYSAILDVYANLGKVEE L+LYERGRASGWKPDP+TFSVL
Sbjct: 241 DKAMEWFERMYRTGLMPDEVTYSAILDVYANLGKVEEALSLYERGRASGWKPDPYTFSVL 300
Query: 301 GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGI 360
GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAG+PGFARSLF+EM+ESGI
Sbjct: 301 GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGRPGFARSLFEEMIESGI 360
Query: 361 TPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEK 420
TPNEKTLTALVKIYGKARWARDAL+LWERMRS GWPMDFILYNTLLNMCADLGLEEEAEK
Sbjct: 361 TPNEKTLTALVKIYGKARWARDALELWERMRSKGWPMDFILYNTLLNMCADLGLEEEAEK 420
Query: 421 LFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCL 480
LFEEMKKSE SRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGV INVMCCTCLIQCL
Sbjct: 421 LFEEMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVGINVMCCTCLIQCL 480
Query: 481 GKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVA 540
GK+ RIDDLVRVF+VS++KG+KPDDRLCGCLLSVVSLCDN+EDISKVFTCLQQANPKLVA
Sbjct: 481 GKARRIDDLVRVFDVSIRKGVKPDDRLCGCLLSVVSLCDNNEDISKVFTCLQQANPKLVA 540
Query: 541 FVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSL 600
FVNLLQQNDITF+V+KDEFR IL ETATEARRPFCNCLIDICRNQNL +RAHELLYLGSL
Sbjct: 541 FVNLLQQNDITFDVIKDEFRTILGETATEARRPFCNCLIDICRNQNLSKRAHELLYLGSL 600
Query: 601 YGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGT 660
YGLYPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGAGT
Sbjct: 601 YGLYPGLHNKTEGEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGT 660
Query: 661 HRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
HRFSQGLANSFASHV+KLAAPF+LREDRAGWFVATRED+V WVHSRVPSVA A
Sbjct: 661 HRFSQGLANSFASHVEKLAAPFRLREDRAGWFVATREDVVAWVHSRVPSVATRA 705
BLAST of CcUC10G187800 vs. NCBI nr
Match:
XP_022923274.1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1286.6 bits (3328), Expect = 0.0e+00
Identity = 641/714 (89.78%), Postives = 678/714 (94.96%), Query Frame = 0
Query: 1 MAAPLSSSLD--LNLKPT-PIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDN 60
MAAPLSSSLD L LKPT P+FFTSPL RN+FTKR TVLC+SSSKSPR STD
Sbjct: 1 MAAPLSSSLDIKLKLKPTPPLFFTSPLRRNNFTKRFTVLCTSSSKSPR--------STDK 60
Query: 61 KNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNP 120
KNPSLSEQLK+LST+TL+NA ND++HLLS PKS WVNPTKPKRSVLSL RQKRSSYSYNP
Sbjct: 61 KNPSLSEQLKDLSTSTLSNASNDESHLLSNPKSIWVNPTKPKRSVLSLQRQKRSSYSYNP 120
Query: 121 QMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK 180
+MR+LK+FAHKLNA DSS EA+FMA L+EIPHPPTKENALLILNSL+PWQKTHLFFNWIK
Sbjct: 121 KMRELKTFAHKLNASDSS-EAAFMAVLKEIPHPPTKENALLILNSLKPWQKTHLFFNWIK 180
Query: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRF 240
TQNLFPMETIFYNVAMKSLRYGRQFQLIE+LANEMI TGIELDNITYSTIITCAKKCSRF
Sbjct: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEELANEMINTGIELDNITYSTIITCAKKCSRF 240
Query: 241 DKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVL 300
DKA+EWFERMY+TGLMPDEVTYSAILDVYANLGKVEE L+LYERGRASGWKPDP+TFSVL
Sbjct: 241 DKAMEWFERMYRTGLMPDEVTYSAILDVYANLGKVEEALSLYERGRASGWKPDPYTFSVL 300
Query: 301 GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGI 360
GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAG+PGFARSLF+EM+ESGI
Sbjct: 301 GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGRPGFARSLFEEMIESGI 360
Query: 361 TPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEK 420
TPNEKTLTALVKIYGKARWARDAL+LWERMRS GWPMDFILYNTLLNMCADLGLEEEAEK
Sbjct: 361 TPNEKTLTALVKIYGKARWARDALELWERMRSKGWPMDFILYNTLLNMCADLGLEEEAEK 420
Query: 421 LFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCL 480
LFEEMKKSE SRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGV INVMCCTCLIQCL
Sbjct: 421 LFEEMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVGINVMCCTCLIQCL 480
Query: 481 GKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVA 540
GK+ RIDDLVRVF+VSV+KG++PDDRLCGCLLSVVSLCDN+EDISKVFTCLQQANPKLVA
Sbjct: 481 GKARRIDDLVRVFDVSVRKGVEPDDRLCGCLLSVVSLCDNNEDISKVFTCLQQANPKLVA 540
Query: 541 FVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSL 600
FVNLLQQNDITF+V+KDEFR IL ETATEARRPFCNCLIDICRNQNL +RAHELLYLGSL
Sbjct: 541 FVNLLQQNDITFDVIKDEFRTILGETATEARRPFCNCLIDICRNQNLSKRAHELLYLGSL 600
Query: 601 YGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGT 660
YGLYPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGAGT
Sbjct: 601 YGLYPGLHNKTEGEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGT 660
Query: 661 HRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
HRFSQGLANSFASHV+KLAAPF+LREDRAGWFVATRED+V WVHSRVPSVA A
Sbjct: 661 HRFSQGLANSFASHVEKLAAPFRLREDRAGWFVATREDVVAWVHSRVPSVATRA 705
BLAST of CcUC10G187800 vs. ExPASy Swiss-Prot
Match:
Q9LS25 (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)
HSP 1 Score: 982.6 bits (2539), Expect = 2.3e-285
Identity = 479/717 (66.81%), Postives = 592/717 (82.57%), Query Frame = 0
Query: 1 MAAPLSSSLDLNLKPT-------PIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSE 60
MA L++++D+ P +F L R S +++L + C SS K P+ + E
Sbjct: 1 MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISC-SSLKQPK---TLEEE 60
Query: 61 STDNKNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSY 120
K PSLSEQLK LS TTL +QT +LSKPKS WVNPT+PKRSVLSL RQKRS+Y
Sbjct: 61 PITTKTPSLSEQLKPLSATTLR---QEQTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAY 120
Query: 121 SYNPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFF 180
SYNPQ++DL++FA KLN+ ++++ F++ L+EIPHPP ++NALL+LNSLR WQKTH FF
Sbjct: 121 SYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFF 180
Query: 181 NWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKK 240
NW+K+++LFPMETIFYNV MKSLR+GRQFQLIE++A EM+ G+ELDNITYSTIITCAK+
Sbjct: 181 NWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKR 240
Query: 241 CSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFT 300
C+ ++KA+EWFERMYKTGLMPDEVTYSAILDVY+ GKVEEVL+LYER A+GWKPD
Sbjct: 241 CNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIA 300
Query: 301 FSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMV 360
FSVLGKMFGEAGDYDGI YVLQEMKS++V+PN+VVYNTLL+AMG+AGKPG ARSLF+EM+
Sbjct: 301 FSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML 360
Query: 361 ESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEE 420
E+G+TPNEKTLTALVKIYGKARWARDAL LWE M++ WPMDFILYNTLLNMCAD+GLEE
Sbjct: 361 EAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEE 420
Query: 421 EAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCL 480
EAE+LF +MK+S + RPD++SYTAMLNI+GSGG +++MELFEEML+ GV++NVM CTCL
Sbjct: 421 EAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCL 480
Query: 481 IQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANP 540
+QCLGK+ RIDD+V VF++S+++G+KPDDRLCGCLLSV++LC++SED KV CL++AN
Sbjct: 481 VQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANK 540
Query: 541 KLVAFVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLY 600
KLV FVNL+ +E VK+EF+ +++ T EARRPFCNCLIDICR N ERAHELLY
Sbjct: 541 KLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLY 600
Query: 601 LGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQT 660
LG+L+GLYPGLHNKT EW LDVRSLSVGAA+TALEEWM TL I++R+E LPEL AQT
Sbjct: 601 LGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQT 660
Query: 661 GAGTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 711
G GTHRFSQGLANSFA H+ +L+APF+ + DR G FVAT+EDLV+W+ S+ P + +
Sbjct: 661 GTGTHRFSQGLANSFALHLQQLSAPFR-QSDRPGIFVATKEDLVSWLESKFPPLVTS 709
BLAST of CcUC10G187800 vs. ExPASy Swiss-Prot
Match:
Q8GWE0 (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)
HSP 1 Score: 446.0 bits (1146), Expect = 7.7e-124
Identity = 237/615 (38.54%), Postives = 367/615 (59.67%), Query Frame = 0
Query: 92 WVNPTKPKRSVLSLHRQKRSSYSYNPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPP 151
WVNP P+ S L R+K SY+ + L A L+AC +EA +
Sbjct: 89 WVNPKSPRASQL---RRK----SYDSRYSSLIKLAESLDAC-KPNEADVCDVITGFGGKL 148
Query: 152 TKENALLILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANE 211
+++A++ LN++ + L N + E I YNV MK R + + E L +E
Sbjct: 149 FEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDE 208
Query: 212 MITTGIELDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGK 271
M+ GI+ DN T++TII+CA++ +AVEWFE+M G PD VT +A++D Y G
Sbjct: 209 MLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 268
Query: 272 VEEVLTLYERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNT 331
V+ L+LY+R R W+ D TFS L +++G +G+YDG + + +EMK++ V+PNLV+YN
Sbjct: 269 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 328
Query: 332 LLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNG 391
L+D+MG+A +P A+ ++ +++ +G TPN T ALV+ YG+AR+ DAL ++ M+ G
Sbjct: 329 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 388
Query: 392 WPMDFILYNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRS 451
+ ILYNTLL+MCAD +EA ++F++MK E PDSW++++++ ++ G V +
Sbjct: 389 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 448
Query: 452 MELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSV 511
+M E G E + T +IQC GK+ ++DD+VR F+ ++ GI PDDR CGCLL+V
Sbjct: 449 EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNV 508
Query: 512 VSLCDNSEDISKVFTCLQQANPKLVAFVNLL-QQNDITFEVVKDEFRNILSETATEARRP 571
++ SE+I K+ C+++A PKL V +L ++ + V K E ++ ++ ++
Sbjct: 509 MTQTP-SEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKA 568
Query: 572 FCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEE 631
+ NCLID+C N N ERA E+L LG Y +Y GL +K+ +W L ++SLS+GAA TAL
Sbjct: 569 YLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHV 628
Query: 632 WMVTLTK-IVQREETLPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGW 691
WM L++ ++ E P LL TG G H++S +GLA F SH+ +L APF D+ GW
Sbjct: 629 WMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGW 688
Query: 692 FVATREDLVTWVHSR 704
F+ T W+ SR
Sbjct: 689 FLTTSVAAKAWLESR 694
BLAST of CcUC10G187800 vs. ExPASy Swiss-Prot
Match:
B4F8Z1 (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)
HSP 1 Score: 444.1 bits (1141), Expect = 2.9e-123
Identity = 251/679 (36.97%), Postives = 389/679 (57.29%), Query Frame = 0
Query: 39 SSSKSPRR-ASPISSESTDNKNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTK 98
S+S +P+ +SP+++ + + P Q ++ S + +N + S + WVNP
Sbjct: 23 SASFNPKNPSSPVAAHVSVQETP---PQPQDPSPPSDSNPNGTRPSSSSNTRFLWVNPNS 82
Query: 99 PKRSVLSLHRQKRSSYSYNPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENAL 158
P+ + ++ R + + + L S A L AC++++ A A P PP++++A+
Sbjct: 83 PRAADVARAR------AGSGRRARLASAAAALGACETTESAVEAALQAAFPEPPSEQDAV 142
Query: 159 LILNSLRPW--QKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITT 218
++LN+ + L W + I YNV +K LR R + E L EM+
Sbjct: 143 IVLNTAAATRAETAVLALRWFLGNAKVRKKVILYNVVLKLLRKKRLWSETEALWAEMLRD 202
Query: 219 GIELDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEV 278
G++ DN T+ST+I+CA+ C KAVEWF++M + G PD +TYSA++D Y + G E
Sbjct: 203 GVQPDNATFSTVISCARACGLHSKAVEWFDKMPEFGCSPDMLTYSAVIDAYGHAGNSEAA 262
Query: 279 LTLYERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDA 338
L LY+R RA W+ DP S + K+ +G++DG + V +EMK+I V+PNLVVYNT+LDA
Sbjct: 263 LRLYDRARAEKWQLDPVICSTVIKVHSTSGNFDGALNVFEEMKAIGVRPNLVVYNTMLDA 322
Query: 339 MGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMD 398
MG+A +P +++ EMV+ + P+ T L+ Y +AR+ DA+ ++ M+ +D
Sbjct: 323 MGRALRPWVVKTIHREMVDQQVQPSRATYCCLLHAYTRARYGEDAMAVYRLMKDEAMGID 382
Query: 399 FILYNTLLNMCADLGLEEEAEKLFEEMKKS--ERSRPDSWSYTAMLNIHGSGGNVKRSME 458
+LYN LL+MCAD+G +EAE++F +MK S S+PDSWSY++M+ ++ S NV +
Sbjct: 383 VMLYNMLLSMCADIGYVDEAEEIFRDMKASMGAHSKPDSWSYSSMVTLYSSTANVLSAEG 442
Query: 459 LFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVS 518
+ EM+E G + N+ T LI+C GK GR DD+VR F + GI PDDR CGCLLSV +
Sbjct: 443 ILNEMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVRSFGMLQDLGIIPDDRFCGCLLSVAA 502
Query: 519 LCDNSEDISKVFTCLQQANPKLVAFVNLLQQNDITFEVVKDEFRNILSETATEARRPFCN 578
+E++ KV +C++++N +L A V LL + E ++ R +L + + P+CN
Sbjct: 503 NTP-AEELGKVISCIERSNVQLGAVVKLLVDRS-SSESFREAARELLRSSRGVVKMPYCN 562
Query: 579 CLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMV 638
CL+D+C N N E+A LL G+Y + +T+ +W L +R LSVGAA T L WM
Sbjct: 563 CLMDLCVNLNQMEKACALLDAAQQLGIYANIQTRTQTQWSLHLRGLSVGAALTTLHVWMN 622
Query: 639 TL-TKIVQREETLPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGWFVA 698
L T + E LP LL TG G + +S +GLA F +H+ +L APF D+AGWF+
Sbjct: 623 DLYTSLQTGNEGLPPLLGIHTGQGKNTYSDRGLAAMFEAHLKELDAPFHEAPDKAGWFLT 682
Query: 699 TREDLVTWVHSRVPSVAAT 711
T W+ S+ S T
Sbjct: 683 TNVAAKQWLESKAASELVT 690
BLAST of CcUC10G187800 vs. ExPASy Swiss-Prot
Match:
Q10PZ4 (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)
HSP 1 Score: 439.9 bits (1130), Expect = 5.5e-122
Identity = 257/676 (38.02%), Postives = 383/676 (56.66%), Query Frame = 0
Query: 38 SSSSKSPRRASPISSESTDNKNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKST----WV 97
SS P RA +S + KNPS S +S P+D + +T WV
Sbjct: 5 SSLLSWPHRAISLSFQP---KNPSPSPATARVSVQDPPPPPSDANPSPGRSSNTSRYVWV 64
Query: 98 NPTKPKRSVLSLHRQKRSSYSYNPQMRDLKSFAHKLNACDSSDEASFMAALE-EIPHPPT 157
NP P+ + L+ R + + + L + A L AC++ EA AALE P PP+
Sbjct: 65 NPNSPRAAGLARAR------AGSGRRARLAAAAAALAACEAG-EAPVAAALEAAFPEPPS 124
Query: 158 KENALLILN--SLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLAN 217
+++A+++LN S RP L W E I YNVA+K+LR R++ E L
Sbjct: 125 EQDAVIVLNTTSARP-AAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWE 184
Query: 218 EMITTGIELDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLG 277
EM+ G++ DN T+ST+I+CA+ C KAVEWFE+M G PD +TYSA++D Y G
Sbjct: 185 EMLREGVQPDNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAG 244
Query: 278 KVEEVLTLYERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYN 337
E L LY+R RA W+ DP + + ++ +G++DG + V +EMK+ V+PNLVVYN
Sbjct: 245 DAETALRLYDRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYN 304
Query: 338 TLLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSN 397
T+LDAMG+A +P +++ E+V PN+ T L+ Y +AR+ DA+ ++ M+
Sbjct: 305 TVLDAMGRAMRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDE 364
Query: 398 GWPMDFILYNTLLNMCADLGLEEEAEKLFEEMKKS--ERSRPDSWSYTAMLNIHGSGGNV 457
+D +LYN LL+MCAD+G EEAE++F +MK S RS+PDSWSY++M+ ++ GNV
Sbjct: 365 VMDIDVVLYNMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNV 424
Query: 458 KRSMELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCL 517
+ + EM+E G + N+ T LI+C GK+GR DD+VR F + GI PDDR CGCL
Sbjct: 425 AGAEGILNEMVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCL 484
Query: 518 LSVVSLCDNSEDISKVFTCLQQANPKLVAFVNLLQQNDITFEVVKDEFRNILSETATEAR 577
L+V + ++++ KV C+ +++ +L A V LL E +++ +L R
Sbjct: 485 LTVAA-GTPADELGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVR 544
Query: 578 RPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTAL 637
P+CNCL+D+ N + E+A LL + G+Y + +T+ +W L +R LSVGAA T L
Sbjct: 545 MPYCNCLMDLAVNLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTL 604
Query: 638 EEWMVTLTKIVQREETLPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAG 697
WM L +Q + LP LL TG G + +S +GLA F SH+ +L APF D+AG
Sbjct: 605 HVWMSDLYAALQAGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAG 664
Query: 698 WFVATREDLVTWVHSR 704
WF+ T W+ ++
Sbjct: 665 WFLTTSVAARHWLETK 668
BLAST of CcUC10G187800 vs. ExPASy Swiss-Prot
Match:
Q8GYP6 (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana OX=3702 GN=At1g18900 PE=2 SV=1)
HSP 1 Score: 186.4 bits (472), Expect = 1.1e-45
Identity = 131/551 (23.77%), Postives = 246/551 (44.65%), Query Frame = 0
Query: 159 ILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIE 218
+L + + FF W+K Q F + Y + +L +QF I L +EM+ G +
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 219 LDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTL 278
+ +TY+ +I + + ++A+ F +M + G PD VTY ++D++A G ++ + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 279 YERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGK 338
Y+R +A G PD FT+SV +++ +GK
Sbjct: 457 YQRMQAGGLSPDTFTYSV-----------------------------------IINCLGK 516
Query: 339 AGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFIL 398
AG A LF EMV+ G TPN T ++ ++ KAR ++AL L+ M++ G+ D +
Sbjct: 517 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 576
Query: 399 YNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEM 458
Y+ ++ + G EEAE +F EM++ + PD Y ++++ G GNV+++ + ++ M
Sbjct: 577 YSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 636
Query: 459 LELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNS 518
L G+ NV C L+ + +I + + + G++P + LLS + D
Sbjct: 637 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT--DGR 696
Query: 519 EDISKVFTCLQQANPKLVAFVNLLQQ-----NDITFEVVKDEFRNILSETATEARRPFCN 578
+ F A+ A + LL+ + + F +++ E++R +
Sbjct: 697 SKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVD 756
Query: 579 CLIDICRNQNLRERAHELLYLGSLYGLYP-GLHNKTEAEWCLDVRSLSVGAAQTALEEWM 638
++D +E A + + + ++P L K+ + W +++ +S G A TAL +
Sbjct: 757 AVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTL 816
Query: 639 VTLTKIVQREETLPELLSAQTGAGTHRFSQG---LANSFASHVDKLAAPFQLREDRAGWF 698
K + T P + TG G G + + ++ +PF +G F
Sbjct: 817 AWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCF 849
Query: 699 VATREDLVTWV 701
V + E L W+
Sbjct: 877 VGSGEPLNRWL 849
BLAST of CcUC10G187800 vs. ExPASy TrEMBL
Match:
A0A5A7UFR2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001750 PE=3 SV=1)
HSP 1 Score: 1342.8 bits (3474), Expect = 0.0e+00
Identity = 667/711 (93.81%), Postives = 692/711 (97.33%), Query Frame = 0
Query: 1 MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNP 60
MAAPLSSSLD LKPTPIFFTS L R KRLT+LC SSSKSPR+ S ISSES DNKNP
Sbjct: 1 MAAPLSSSLDFKLKPTPIFFTSLLRRKYVNKRLTLLC-SSSKSPRKPSSISSESIDNKNP 60
Query: 61 SLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMR 120
SLS+QLKNLSTTTL+NAPND+T LLSKPKSTWVNPTKPKRSVLSL RQKRSSYSYNP+MR
Sbjct: 61 SLSDQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR 120
Query: 121 DLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
DLKSFAHKLNACDSSDEASF+AALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN
Sbjct: 121 DLKSFAHKLNACDSSDEASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
Query: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKA 240
LFPMETIFYNVAMKSLRYGRQFQLIEDLAN+M++TGIELDNITYSTIITCAKKCSRFDKA
Sbjct: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANDMVSTGIELDNITYSTIITCAKKCSRFDKA 240
Query: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKM 300
+EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVL+LYERGRASGWKPDP+TFSVLGKM
Sbjct: 241 MEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPYTFSVLGKM 300
Query: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
FGEAGDYDGIMYVLQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN
Sbjct: 301 FGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
Query: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE
Sbjct: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
Query: 421 EMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
EMKKS+ SRPDSWSYTAMLNI+GSGGNVKRSMELFEEML+LGVEINVMCCTCLIQCLGKS
Sbjct: 421 EMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKS 480
Query: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVN 540
GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDI+KVFTCLQQANPKLV+FVN
Sbjct: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQANPKLVSFVN 540
Query: 541 LLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
LLQQN ITFEV+K+EFRNILSETA+EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL
Sbjct: 541 LLQQNSITFEVIKNEFRNILSETASEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
Query: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRF 660
YPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQR+E LPELLSAQTGAGTHRF
Sbjct: 601 YPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRKEALPELLSAQTGAGTHRF 660
Query: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSV ATA
Sbjct: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVPATA 710
BLAST of CcUC10G187800 vs. ExPASy TrEMBL
Match:
A0A1S3BKZ1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490799 PE=3 SV=1)
HSP 1 Score: 1342.8 bits (3474), Expect = 0.0e+00
Identity = 667/711 (93.81%), Postives = 692/711 (97.33%), Query Frame = 0
Query: 1 MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNP 60
MAAPLSSSLD LKPTPIFFTS L R KRLT+LC SSSKSPR+ S ISSES DNKNP
Sbjct: 1 MAAPLSSSLDFKLKPTPIFFTSLLRRKYVNKRLTLLC-SSSKSPRKPSSISSESIDNKNP 60
Query: 61 SLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMR 120
SLS+QLKNLSTTTL+NAPND+T LLSKPKSTWVNPTKPKRSVLSL RQKRSSYSYNP+MR
Sbjct: 61 SLSDQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR 120
Query: 121 DLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
DLKSFAHKLNACDSSDEASF+AALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN
Sbjct: 121 DLKSFAHKLNACDSSDEASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
Query: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKA 240
LFPMETIFYNVAMKSLRYGRQFQLIEDLAN+M++TGIELDNITYSTIITCAKKCSRFDKA
Sbjct: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANDMVSTGIELDNITYSTIITCAKKCSRFDKA 240
Query: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKM 300
+EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVL+LYERGRASGWKPDP+TFSVLGKM
Sbjct: 241 MEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPYTFSVLGKM 300
Query: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
FGEAGDYDGIMYVLQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN
Sbjct: 301 FGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
Query: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE
Sbjct: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
Query: 421 EMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
EMKKS+ SRPDSWSYTAMLNI+GSGGNVKRSMELFEEML+LGVEINVMCCTCLIQCLGKS
Sbjct: 421 EMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKS 480
Query: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVN 540
GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDI+KVFTCLQQANPKLV+FVN
Sbjct: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQANPKLVSFVN 540
Query: 541 LLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
LLQQN ITFEV+K+EFRNILSETA+EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL
Sbjct: 541 LLQQNSITFEVIKNEFRNILSETASEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
Query: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRF 660
YPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQR+E LPELLSAQTGAGTHRF
Sbjct: 601 YPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRKEALPELLSAQTGAGTHRF 660
Query: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSV ATA
Sbjct: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVPATA 710
BLAST of CcUC10G187800 vs. ExPASy TrEMBL
Match:
A0A0A0L6K8 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011820 PE=3 SV=1)
HSP 1 Score: 1342.4 bits (3473), Expect = 0.0e+00
Identity = 666/711 (93.67%), Postives = 691/711 (97.19%), Query Frame = 0
Query: 1 MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNP 60
MA PLSSSLDL LKPTPIFFTSPL R + TKRLT+LC SSSKSPR+ S +SS+S DNKNP
Sbjct: 1 MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLC-SSSKSPRKPSSVSSQSVDNKNP 60
Query: 61 SLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMR 120
SLSEQLKNLSTTTL+NAPND+T LLSKPKSTWVNPTKPKRSVLSL RQKRSSYSYNP+MR
Sbjct: 61 SLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR 120
Query: 121 DLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
DLKSFAHKLNACDSSD+ASF+AALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK+QN
Sbjct: 121 DLKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQN 180
Query: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKA 240
LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMI+ GIELDNITYSTIITCAKKCSRFDKA
Sbjct: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKA 240
Query: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKM 300
+EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVL+LYERGRASGW PDP+TFSVLGKM
Sbjct: 241 MEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKM 300
Query: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
FGEAGDYDGIMYVLQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN
Sbjct: 301 FGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
Query: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAE LFE
Sbjct: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFE 420
Query: 421 EMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
EMKKS+ SRPDSWSYTAMLNI+GSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS
Sbjct: 421 EMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
Query: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVN 540
GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSV+SLC NSEDI+KVFTCLQQANPKLV+F+N
Sbjct: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFIN 540
Query: 541 LLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
LLQQNDITFEVVK+EFRNIL ETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL
Sbjct: 541 LLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
Query: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRF 660
YPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGAGTHRF
Sbjct: 601 YPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRF 660
Query: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA
Sbjct: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 710
BLAST of CcUC10G187800 vs. ExPASy TrEMBL
Match:
A0A6J1E5X7 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111431017 PE=3 SV=1)
HSP 1 Score: 1286.6 bits (3328), Expect = 0.0e+00
Identity = 641/714 (89.78%), Postives = 678/714 (94.96%), Query Frame = 0
Query: 1 MAAPLSSSLD--LNLKPT-PIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDN 60
MAAPLSSSLD L LKPT P+FFTSPL RN+FTKR TVLC+SSSKSPR STD
Sbjct: 1 MAAPLSSSLDIKLKLKPTPPLFFTSPLRRNNFTKRFTVLCTSSSKSPR--------STDK 60
Query: 61 KNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNP 120
KNPSLSEQLK+LST+TL+NA ND++HLLS PKS WVNPTKPKRSVLSL RQKRSSYSYNP
Sbjct: 61 KNPSLSEQLKDLSTSTLSNASNDESHLLSNPKSIWVNPTKPKRSVLSLQRQKRSSYSYNP 120
Query: 121 QMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK 180
+MR+LK+FAHKLNA DSS EA+FMA L+EIPHPPTKENALLILNSL+PWQKTHLFFNWIK
Sbjct: 121 KMRELKTFAHKLNASDSS-EAAFMAVLKEIPHPPTKENALLILNSLKPWQKTHLFFNWIK 180
Query: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRF 240
TQNLFPMETIFYNVAMKSLRYGRQFQLIE+LANEMI TGIELDNITYSTIITCAKKCSRF
Sbjct: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEELANEMINTGIELDNITYSTIITCAKKCSRF 240
Query: 241 DKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVL 300
DKA+EWFERMY+TGLMPDEVTYSAILDVYANLGKVEE L+LYERGRASGWKPDP+TFSVL
Sbjct: 241 DKAMEWFERMYRTGLMPDEVTYSAILDVYANLGKVEEALSLYERGRASGWKPDPYTFSVL 300
Query: 301 GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGI 360
GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAG+PGFARSLF+EM+ESGI
Sbjct: 301 GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGRPGFARSLFEEMIESGI 360
Query: 361 TPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEK 420
TPNEKTLTALVKIYGKARWARDAL+LWERMRS GWPMDFILYNTLLNMCADLGLEEEAEK
Sbjct: 361 TPNEKTLTALVKIYGKARWARDALELWERMRSKGWPMDFILYNTLLNMCADLGLEEEAEK 420
Query: 421 LFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCL 480
LFEEMKKSE SRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGV INVMCCTCLIQCL
Sbjct: 421 LFEEMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVGINVMCCTCLIQCL 480
Query: 481 GKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVA 540
GK+ RIDDLVRVF+VSV+KG++PDDRLCGCLLSVVSLCDN+EDISKVFTCLQQANPKLVA
Sbjct: 481 GKARRIDDLVRVFDVSVRKGVEPDDRLCGCLLSVVSLCDNNEDISKVFTCLQQANPKLVA 540
Query: 541 FVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSL 600
FVNLLQQNDITF+V+KDEFR IL ETATEARRPFCNCLIDICRNQNL +RAHELLYLGSL
Sbjct: 541 FVNLLQQNDITFDVIKDEFRTILGETATEARRPFCNCLIDICRNQNLSKRAHELLYLGSL 600
Query: 601 YGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGT 660
YGLYPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGAGT
Sbjct: 601 YGLYPGLHNKTEGEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGT 660
Query: 661 HRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
HRFSQGLANSFASHV+KLAAPF+LREDRAGWFVATRED+V WVHSRVPSVA A
Sbjct: 661 HRFSQGLANSFASHVEKLAAPFRLREDRAGWFVATREDVVAWVHSRVPSVATRA 705
BLAST of CcUC10G187800 vs. ExPASy TrEMBL
Match:
A0A6J1L5S8 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111500252 PE=3 SV=1)
HSP 1 Score: 1276.2 bits (3301), Expect = 0.0e+00
Identity = 639/716 (89.25%), Postives = 673/716 (93.99%), Query Frame = 0
Query: 1 MAAPLSSSLD----LNLKPT-PIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSEST 60
MAAPLSSSLD L LKPT P+FFTSPL RN+FTKRLTVLC +SSKSPR ST
Sbjct: 1 MAAPLSSSLDIKLRLKLKPTPPLFFTSPLRRNNFTKRLTVLC-TSSKSPR--------ST 60
Query: 61 DNKNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSY 120
D KN SLSEQLK+LST TL+NA ND++HLLS PKS WVNPTKPKRSVLSL RQKRSSYSY
Sbjct: 61 DKKNSSLSEQLKDLSTCTLSNASNDESHLLSNPKSIWVNPTKPKRSVLSLQRQKRSSYSY 120
Query: 121 NPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNW 180
NP+MR+LK+FAHKLNA D S EA+FMA L+EIPHPPTKENALLILNSL+PWQKTHLFFNW
Sbjct: 121 NPKMRELKTFAHKLNASDFS-EAAFMAVLKEIPHPPTKENALLILNSLKPWQKTHLFFNW 180
Query: 181 IKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCS 240
IKTQNLFPMETIFYNVAMKSLRYGRQFQLIE+LANEMI TGIELDNITYSTIITCAKKCS
Sbjct: 181 IKTQNLFPMETIFYNVAMKSLRYGRQFQLIEELANEMINTGIELDNITYSTIITCAKKCS 240
Query: 241 RFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFS 300
RFDKA+EWFERMY+TGLMPDEVTYSAILDVYANLGKVEE L+LYERGRASGWKPDP+TFS
Sbjct: 241 RFDKAMEWFERMYRTGLMPDEVTYSAILDVYANLGKVEEALSLYERGRASGWKPDPYTFS 300
Query: 301 VLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVES 360
VLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNT+LDAMGKAG+PGFARSLF+EM+ES
Sbjct: 301 VLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTMLDAMGKAGRPGFARSLFEEMIES 360
Query: 361 GITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEA 420
GITPNEKTLTALVKIYGKARWARDALDLWERMRS GWPMDFILYNTLLNMCADLGLEEEA
Sbjct: 361 GITPNEKTLTALVKIYGKARWARDALDLWERMRSKGWPMDFILYNTLLNMCADLGLEEEA 420
Query: 421 EKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQ 480
EKLFEEMKKSE SRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGV INVMCCTCLIQ
Sbjct: 421 EKLFEEMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVGINVMCCTCLIQ 480
Query: 481 CLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKL 540
CLGK+ RIDDLVRVF+VSV+KG+KPDDRLCGCLLSVVSLCDN+EDISKVFTCLQQANPKL
Sbjct: 481 CLGKARRIDDLVRVFDVSVRKGVKPDDRLCGCLLSVVSLCDNNEDISKVFTCLQQANPKL 540
Query: 541 VAFVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLG 600
V FVNLLQQNDITF+V+KDEFR IL ET TEARRPFCNCLIDICRNQNL +RAHELLYLG
Sbjct: 541 VEFVNLLQQNDITFDVIKDEFRTILGETTTEARRPFCNCLIDICRNQNLSKRAHELLYLG 600
Query: 601 SLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGA 660
SLYGLYPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGA
Sbjct: 601 SLYGLYPGLHNKTEGEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGA 660
Query: 661 GTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
GTHRFSQGLANSFASHV+KLAAPF+LREDRAGWFVATRED V WVHSRVPSVA TA
Sbjct: 661 GTHRFSQGLANSFASHVEKLAAPFRLREDRAGWFVATREDFVAWVHSRVPSVATTA 706
BLAST of CcUC10G187800 vs. TAIR 10
Match:
AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 982.6 bits (2539), Expect = 1.6e-286
Identity = 479/717 (66.81%), Postives = 592/717 (82.57%), Query Frame = 0
Query: 1 MAAPLSSSLDLNLKPT-------PIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSE 60
MA L++++D+ P +F L R S +++L + C SS K P+ + E
Sbjct: 1 MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISC-SSLKQPK---TLEEE 60
Query: 61 STDNKNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSY 120
K PSLSEQLK LS TTL +QT +LSKPKS WVNPT+PKRSVLSL RQKRS+Y
Sbjct: 61 PITTKTPSLSEQLKPLSATTLR---QEQTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAY 120
Query: 121 SYNPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFF 180
SYNPQ++DL++FA KLN+ ++++ F++ L+EIPHPP ++NALL+LNSLR WQKTH FF
Sbjct: 121 SYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFF 180
Query: 181 NWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKK 240
NW+K+++LFPMETIFYNV MKSLR+GRQFQLIE++A EM+ G+ELDNITYSTIITCAK+
Sbjct: 181 NWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKR 240
Query: 241 CSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFT 300
C+ ++KA+EWFERMYKTGLMPDEVTYSAILDVY+ GKVEEVL+LYER A+GWKPD
Sbjct: 241 CNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIA 300
Query: 301 FSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMV 360
FSVLGKMFGEAGDYDGI YVLQEMKS++V+PN+VVYNTLL+AMG+AGKPG ARSLF+EM+
Sbjct: 301 FSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML 360
Query: 361 ESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEE 420
E+G+TPNEKTLTALVKIYGKARWARDAL LWE M++ WPMDFILYNTLLNMCAD+GLEE
Sbjct: 361 EAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEE 420
Query: 421 EAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCL 480
EAE+LF +MK+S + RPD++SYTAMLNI+GSGG +++MELFEEML+ GV++NVM CTCL
Sbjct: 421 EAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCL 480
Query: 481 IQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANP 540
+QCLGK+ RIDD+V VF++S+++G+KPDDRLCGCLLSV++LC++SED KV CL++AN
Sbjct: 481 VQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANK 540
Query: 541 KLVAFVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLY 600
KLV FVNL+ +E VK+EF+ +++ T EARRPFCNCLIDICR N ERAHELLY
Sbjct: 541 KLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLY 600
Query: 601 LGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQT 660
LG+L+GLYPGLHNKT EW LDVRSLSVGAA+TALEEWM TL I++R+E LPEL AQT
Sbjct: 601 LGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQT 660
Query: 661 GAGTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 711
G GTHRFSQGLANSFA H+ +L+APF+ + DR G FVAT+EDLV+W+ S+ P + +
Sbjct: 661 GTGTHRFSQGLANSFALHLQQLSAPFR-QSDRPGIFVATKEDLVSWLESKFPPLVTS 709
BLAST of CcUC10G187800 vs. TAIR 10
Match:
AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 446.0 bits (1146), Expect = 5.5e-125
Identity = 237/615 (38.54%), Postives = 367/615 (59.67%), Query Frame = 0
Query: 92 WVNPTKPKRSVLSLHRQKRSSYSYNPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPP 151
WVNP P+ S L R+K SY+ + L A L+AC +EA +
Sbjct: 89 WVNPKSPRASQL---RRK----SYDSRYSSLIKLAESLDAC-KPNEADVCDVITGFGGKL 148
Query: 152 TKENALLILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANE 211
+++A++ LN++ + L N + E I YNV MK R + + E L +E
Sbjct: 149 FEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDE 208
Query: 212 MITTGIELDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGK 271
M+ GI+ DN T++TII+CA++ +AVEWFE+M G PD VT +A++D Y G
Sbjct: 209 MLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 268
Query: 272 VEEVLTLYERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNT 331
V+ L+LY+R R W+ D TFS L +++G +G+YDG + + +EMK++ V+PNLV+YN
Sbjct: 269 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 328
Query: 332 LLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNG 391
L+D+MG+A +P A+ ++ +++ +G TPN T ALV+ YG+AR+ DAL ++ M+ G
Sbjct: 329 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 388
Query: 392 WPMDFILYNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRS 451
+ ILYNTLL+MCAD +EA ++F++MK E PDSW++++++ ++ G V +
Sbjct: 389 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 448
Query: 452 MELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSV 511
+M E G E + T +IQC GK+ ++DD+VR F+ ++ GI PDDR CGCLL+V
Sbjct: 449 EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNV 508
Query: 512 VSLCDNSEDISKVFTCLQQANPKLVAFVNLL-QQNDITFEVVKDEFRNILSETATEARRP 571
++ SE+I K+ C+++A PKL V +L ++ + V K E ++ ++ ++
Sbjct: 509 MTQTP-SEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKA 568
Query: 572 FCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEE 631
+ NCLID+C N N ERA E+L LG Y +Y GL +K+ +W L ++SLS+GAA TAL
Sbjct: 569 YLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHV 628
Query: 632 WMVTLTK-IVQREETLPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGW 691
WM L++ ++ E P LL TG G H++S +GLA F SH+ +L APF D+ GW
Sbjct: 629 WMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGW 688
Query: 692 FVATREDLVTWVHSR 704
F+ T W+ SR
Sbjct: 689 FLTTSVAAKAWLESR 694
BLAST of CcUC10G187800 vs. TAIR 10
Match:
AT1G18900.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 186.4 bits (472), Expect = 7.8e-47
Identity = 131/551 (23.77%), Postives = 246/551 (44.65%), Query Frame = 0
Query: 159 ILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIE 218
+L + + FF W+K Q F + Y + +L +QF I L +EM+ G +
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 219 LDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTL 278
+ +TY+ +I + + ++A+ F +M + G PD VTY ++D++A G ++ + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 279 YERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGK 338
Y+R +A G PD FT+SV +++ +GK
Sbjct: 457 YQRMQAGGLSPDTFTYSV-----------------------------------IINCLGK 516
Query: 339 AGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFIL 398
AG A LF EMV+ G TPN T ++ ++ KAR ++AL L+ M++ G+ D +
Sbjct: 517 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 576
Query: 399 YNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEM 458
Y+ ++ + G EEAE +F EM++ + PD Y ++++ G GNV+++ + ++ M
Sbjct: 577 YSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 636
Query: 459 LELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNS 518
L G+ NV C L+ + +I + + + G++P + LLS + D
Sbjct: 637 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT--DGR 696
Query: 519 EDISKVFTCLQQANPKLVAFVNLLQQ-----NDITFEVVKDEFRNILSETATEARRPFCN 578
+ F A+ A + LL+ + + F +++ E++R +
Sbjct: 697 SKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVD 756
Query: 579 CLIDICRNQNLRERAHELLYLGSLYGLYP-GLHNKTEAEWCLDVRSLSVGAAQTALEEWM 638
++D +E A + + + ++P L K+ + W +++ +S G A TAL +
Sbjct: 757 AVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTL 816
Query: 639 VTLTKIVQREETLPELLSAQTGAGTHRFSQG---LANSFASHVDKLAAPFQLREDRAGWF 698
K + T P + TG G G + + ++ +PF +G F
Sbjct: 817 AWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCF 849
Query: 699 VATREDLVTWV 701
V + E L W+
Sbjct: 877 VGSGEPLNRWL 849
BLAST of CcUC10G187800 vs. TAIR 10
Match:
AT1G18900.2 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 186.4 bits (472), Expect = 7.8e-47
Identity = 131/551 (23.77%), Postives = 246/551 (44.65%), Query Frame = 0
Query: 159 ILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIE 218
+L + + FF W+K Q F + Y + +L +QF I L +EM+ G +
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 219 LDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTL 278
+ +TY+ +I + + ++A+ F +M + G PD VTY ++D++A G ++ + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 279 YERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGK 338
Y+R +A G PD FT+SV +++ +GK
Sbjct: 457 YQRMQAGGLSPDTFTYSV-----------------------------------IINCLGK 516
Query: 339 AGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFIL 398
AG A LF EMV+ G TPN T ++ ++ KAR ++AL L+ M++ G+ D +
Sbjct: 517 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 576
Query: 399 YNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEM 458
Y+ ++ + G EEAE +F EM++ + PD Y ++++ G GNV+++ + ++ M
Sbjct: 577 YSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 636
Query: 459 LELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNS 518
L G+ NV C L+ + +I + + + G++P + LLS + D
Sbjct: 637 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT--DGR 696
Query: 519 EDISKVFTCLQQANPKLVAFVNLLQQ-----NDITFEVVKDEFRNILSETATEARRPFCN 578
+ F A+ A + LL+ + + F +++ E++R +
Sbjct: 697 SKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVD 756
Query: 579 CLIDICRNQNLRERAHELLYLGSLYGLYP-GLHNKTEAEWCLDVRSLSVGAAQTALEEWM 638
++D +E A + + + ++P L K+ + W +++ +S G A TAL +
Sbjct: 757 AVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTL 816
Query: 639 VTLTKIVQREETLPELLSAQTGAGTHRFSQG---LANSFASHVDKLAAPFQLREDRAGWF 698
K + T P + TG G G + + ++ +PF +G F
Sbjct: 817 AWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCF 849
Query: 699 VATREDLVTWV 701
V + E L W+
Sbjct: 877 VGSGEPLNRWL 849
BLAST of CcUC10G187800 vs. TAIR 10
Match:
AT1G18900.3 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 186.4 bits (472), Expect = 7.8e-47
Identity = 131/551 (23.77%), Postives = 246/551 (44.65%), Query Frame = 0
Query: 159 ILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIE 218
+L + + FF W+K Q F + Y + +L +QF I L +EM+ G +
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 219 LDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTL 278
+ +TY+ +I + + ++A+ F +M + G PD VTY ++D++A G ++ + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 279 YERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGK 338
Y+R +A G PD FT+SV +++ +GK
Sbjct: 457 YQRMQAGGLSPDTFTYSV-----------------------------------IINCLGK 516
Query: 339 AGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFIL 398
AG A LF EMV+ G TPN T ++ ++ KAR ++AL L+ M++ G+ D +
Sbjct: 517 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 576
Query: 399 YNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEM 458
Y+ ++ + G EEAE +F EM++ + PD Y ++++ G GNV+++ + ++ M
Sbjct: 577 YSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 636
Query: 459 LELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNS 518
L G+ NV C L+ + +I + + + G++P + LLS + D
Sbjct: 637 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT--DGR 696
Query: 519 EDISKVFTCLQQANPKLVAFVNLLQQ-----NDITFEVVKDEFRNILSETATEARRPFCN 578
+ F A+ A + LL+ + + F +++ E++R +
Sbjct: 697 SKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVD 756
Query: 579 CLIDICRNQNLRERAHELLYLGSLYGLYP-GLHNKTEAEWCLDVRSLSVGAAQTALEEWM 638
++D +E A + + + ++P L K+ + W +++ +S G A TAL +
Sbjct: 757 AVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTL 816
Query: 639 VTLTKIVQREETLPELLSAQTGAGTHRFSQG---LANSFASHVDKLAAPFQLREDRAGWF 698
K + T P + TG G G + + ++ +PF +G F
Sbjct: 817 AWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCF 849
Query: 699 VATREDLVTWV 701
V + E L W+
Sbjct: 877 VGSGEPLNRWL 849
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038906217.1 | 0.0e+00 | 95.50 | pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Benincasa ... | [more] |
XP_008448710.1 | 0.0e+00 | 93.81 | PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic ... | [more] |
XP_004148730.1 | 0.0e+00 | 93.67 | pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis sa... | [more] |
KAG7015666.1 | 0.0e+00 | 89.78 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022923274.1 | 0.0e+00 | 89.78 | pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
Q9LS25 | 2.3e-285 | 66.81 | Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop... | [more] |
Q8GWE0 | 7.7e-124 | 38.54 | Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop... | [more] |
B4F8Z1 | 2.9e-123 | 36.97 | Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4... | [more] |
Q10PZ4 | 5.5e-122 | 38.02 | Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza... | [more] |
Q8GYP6 | 1.1e-45 | 23.77 | Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UFR2 | 0.0e+00 | 93.81 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BKZ1 | 0.0e+00 | 93.81 | pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Cucumis ... | [more] |
A0A0A0L6K8 | 0.0e+00 | 93.67 | Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011820 PE=3 SV... | [more] |
A0A6J1E5X7 | 0.0e+00 | 89.78 | pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like OS=Cuc... | [more] |
A0A6J1L5S8 | 0.0e+00 | 89.25 | pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
AT5G46580.1 | 1.6e-286 | 66.81 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT4G16390.1 | 5.5e-125 | 38.54 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT1G18900.1 | 7.8e-47 | 23.77 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G18900.2 | 7.8e-47 | 23.77 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G18900.3 | 7.8e-47 | 23.77 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |