CcUC10G187630 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC10G187630
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr10: 1631463 .. 1631798 (+)
RNA-Seq ExpressionCcUC10G187630
SyntenyCcUC10G187630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCTGAATTGCCTCTCATGTCAACTCTTACAGAGAACGGACTCCGAGAGACACCGCGACCAGCAAATCCAAACTTATTATTGTTCCGATGAGTTCGATTCGTCGCAGAGAAGTTGGTCCGGCAACCTCTCGTTCCGGCCTCACGATCGCCAGAACAGAGGAGGGTTTCGGGGCCTGGCGGAGAACAAGGTGGCTCCGACCGGTCACCGCCGCACCGTGTCGTACGGCGGGAAGGAGCCGAGGCTGGTTAGAAGCTCAGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAACTATTCGAGAGGAAAGGGAACCATCGGCCAATTCCTGA

mRNA sequence

ATGAGTCTGAATTGCCTCTCATGTCAACTCTTACAGAGAACGGACTCCGAGAGACACCGCGACCAGCAAATCCAAACTTATTATTGTTCCGATGAGTTCGATTCGTCGCAGAGAAGTTGGTCCGGCAACCTCTCGTTCCGGCCTCACGATCGCCAGAACAGAGGAGGGTTTCGGGGCCTGGCGGAGAACAAGGTGGCTCCGACCGGTCACCGCCGCACCGTGTCGTACGGCGGGAAGGAGCCGAGGCTGGTTAGAAGCTCAGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAACTATTCGAGAGGAAAGGGAACCATCGGCCAATTCCTGA

Coding sequence (CDS)

ATGAGTCTGAATTGCCTCTCATGTCAACTCTTACAGAGAACGGACTCCGAGAGACACCGCGACCAGCAAATCCAAACTTATTATTGTTCCGATGAGTTCGATTCGTCGCAGAGAAGTTGGTCCGGCAACCTCTCGTTCCGGCCTCACGATCGCCAGAACAGAGGAGGGTTTCGGGGCCTGGCGGAGAACAAGGTGGCTCCGACCGGTCACCGCCGCACCGTGTCGTACGGCGGGAAGGAGCCGAGGCTGGTTAGAAGCTCAGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAACTATTCGAGAGGAAAGGGAACCATCGGCCAATTCCTGA

Protein sequence

MSLNCLSCQLLQRTDSERHRDQQIQTYYCSDEFDSSQRSWSGNLSFRPHDRQNRGGFRGLAENKVAPTGHRRTVSYGGKEPRLVRSSGMRRDWSFEDLRTIREEREPSANS
Homology
BLAST of CcUC10G187630 vs. NCBI nr
Match: XP_038905810.1 (uncharacterized protein LOC120091761 [Benincasa hispida])

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49
Identity = 100/109 (91.74%), Postives = 103/109 (94.50%), Query Frame = 0

Query: 1   MSLNCLSCQLLQRTDSERHRDQQIQTYYCSDEFDSSQRSWSGNLSFRPHDRQNRGGFRGL 60
           MSLNCLSCQ+LQRTDSERHRDQQIQTYY SDEFDSS+RSWSGNLSFRPHDR NRGGFRGL
Sbjct: 1   MSLNCLSCQILQRTDSERHRDQQIQTYYASDEFDSSERSWSGNLSFRPHDRHNRGGFRGL 60

Query: 61  AENKVAPTGHRRTVSYGGKEPRLVRSSGMRRDWSFEDLRTIREEREPSA 110
            ENKVAP  HRR VS+GGKEPRLVRSSGMRRDWSFEDLRTIREEREPSA
Sbjct: 61  PENKVAPISHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIREEREPSA 109

BLAST of CcUC10G187630 vs. NCBI nr
Match: XP_008448684.1 (PREDICTED: uncharacterized protein LOC103490783 [Cucumis melo] >KAA0053043.1 uncharacterized protein E6C27_scaffold344G001590 [Cucumis melo var. makuwa] >TYK11498.1 uncharacterized protein E5676_scaffold139G001620 [Cucumis melo var. makuwa])

HSP 1 Score: 183.7 bits (465), Expect = 8.5e-43
Identity = 95/112 (84.82%), Postives = 100/112 (89.29%), Query Frame = 0

Query: 1   MSLNCLSCQLLQRTDSERHRDQQIQTYYCSDEFDSSQRSWSGNLSFRPHDRQNRGG-FRG 60
           MSLNCLSCQLLQRTDSERHRD+QIQTYY SDEFD SQRSWSGNLS     RQNRGG FRG
Sbjct: 1   MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSL----RQNRGGVFRG 60

Query: 61  LAENKVAPTGHRRTVSYGGKEPRLVRSSGMRRDWSFEDLRTIREEREPSANS 112
           +A+NKVAP  HRR VS+GGKEPRLVRSSGMRRDWSFEDLRTIREE+EPS NS
Sbjct: 61  MADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIREEKEPSPNS 108

BLAST of CcUC10G187630 vs. NCBI nr
Match: XP_031737872.1 (uncharacterized protein LOC116402546 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 2.3e-40
Identity = 87/119 (73.11%), Postives = 99/119 (83.19%), Query Frame = 0

Query: 1   MSLNCLSCQLLQRTDSERHRDQQIQTYYCSDEFDSSQRSWSGNLSFRPHDRQNRG----- 60
           MSLNCLSCQ+LQRTDSERHRD+Q+QTYY SDEF+SS+RSWSGNL  RP+     G     
Sbjct: 1   MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGGG 60

Query: 61  ---GFRGLAENKVAPTGHRRTVSYGGKEPRLVRSSGMRRDWSFEDLRTIREEREPSANS 112
              GFRG+A+NKVAP GHRR VS+GGKEPRL+RSSGMRRDWSFEDLR IREE++PS NS
Sbjct: 61  GGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFEDLRAIREEKQPSPNS 119

BLAST of CcUC10G187630 vs. NCBI nr
Match: KAE8650028.1 (hypothetical protein Csa_011525 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 1.2e-36
Identity = 81/110 (73.64%), Postives = 91/110 (82.73%), Query Frame = 0

Query: 1   MSLNCLSCQLLQRTDSERHRDQQIQTYYCSDEFDSSQRSWSGNLSFRPHDRQNRG----- 60
           MSLNCLSCQ+LQRTDSERHRD+Q+QTYY SDEF+SS+RSWSGNL  RP+     G     
Sbjct: 1   MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGGG 60

Query: 61  ---GFRGLAENKVAPTGHRRTVSYGGKEPRLVRSSGMRRDWSFEDLRTIR 103
              GFRG+A+NKVAP GHRR VS+GGKEPRL+RSSGMRRDWSFEDLR IR
Sbjct: 61  GGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFEDLRAIR 110

BLAST of CcUC10G187630 vs. NCBI nr
Match: XP_023539506.1 (uncharacterized protein LOC111800149 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.8 bits (338), Expect = 4.5e-28
Identity = 77/119 (64.71%), Postives = 86/119 (72.27%), Query Frame = 0

Query: 1   MSLNCLSCQL-LQRTDSERHRDQQIQTYYCSDEFDSSQRSWSGNLSFRPHDRQNRGGFRG 60
           MSLNCLSCQL LQR+DS++  +Q     Y +D+  S  RSWSGNLSFRP  RQN  GFR 
Sbjct: 1   MSLNCLSCQLFLQRSDSDKDLEQH---EYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRV 60

Query: 61  LAENKVAPTGHRRTVSYG-------GKEPRLVRSSGMRRDWSFEDLRTIREEREPSANS 112
             ENKVAPTGHRR  S G       GKEPRL+RS+GMRRDWSFEDLR IREE+E S NS
Sbjct: 61  RTENKVAPTGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSFEDLRAIREEKESSPNS 116

BLAST of CcUC10G187630 vs. ExPASy TrEMBL
Match: A0A5A7UAS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001620 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.1e-43
Identity = 95/112 (84.82%), Postives = 100/112 (89.29%), Query Frame = 0

Query: 1   MSLNCLSCQLLQRTDSERHRDQQIQTYYCSDEFDSSQRSWSGNLSFRPHDRQNRGG-FRG 60
           MSLNCLSCQLLQRTDSERHRD+QIQTYY SDEFD SQRSWSGNLS     RQNRGG FRG
Sbjct: 1   MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSL----RQNRGGVFRG 60

Query: 61  LAENKVAPTGHRRTVSYGGKEPRLVRSSGMRRDWSFEDLRTIREEREPSANS 112
           +A+NKVAP  HRR VS+GGKEPRLVRSSGMRRDWSFEDLRTIREE+EPS NS
Sbjct: 61  MADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIREEKEPSPNS 108

BLAST of CcUC10G187630 vs. ExPASy TrEMBL
Match: A0A1S3BJN6 (uncharacterized protein LOC103490783 OS=Cucumis melo OX=3656 GN=LOC103490783 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.1e-43
Identity = 95/112 (84.82%), Postives = 100/112 (89.29%), Query Frame = 0

Query: 1   MSLNCLSCQLLQRTDSERHRDQQIQTYYCSDEFDSSQRSWSGNLSFRPHDRQNRGG-FRG 60
           MSLNCLSCQLLQRTDSERHRD+QIQTYY SDEFD SQRSWSGNLS     RQNRGG FRG
Sbjct: 1   MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSL----RQNRGGVFRG 60

Query: 61  LAENKVAPTGHRRTVSYGGKEPRLVRSSGMRRDWSFEDLRTIREEREPSANS 112
           +A+NKVAP  HRR VS+GGKEPRLVRSSGMRRDWSFEDLRTIREE+EPS NS
Sbjct: 61  MADNKVAPVCHRRAVSFGGKEPRLVRSSGMRRDWSFEDLRTIREEKEPSPNS 108

BLAST of CcUC10G187630 vs. ExPASy TrEMBL
Match: A0A0A0L198 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011635 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.9e-41
Identity = 87/115 (75.65%), Postives = 99/115 (86.09%), Query Frame = 0

Query: 1   MSLNCLSCQLLQRTDSERHRDQQIQTYYCSDEFDSSQRSWSGNLSFRPHDRQNRG----G 60
           MSLNCLSCQ+LQRTDSERHRD+Q+QTYY SDEF+SS+RSWSGNL  RP+     G    G
Sbjct: 1   MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRG 60

Query: 61  FRGLAENKVAPTGHRRTVSYGGKEPRLVRSSGMRRDWSFEDLRTIREEREPSANS 112
           FRG+A+NKVAP GHRR VS+GGKEPRL+RSSGMRRDWSFEDLR IREE++PS NS
Sbjct: 61  FRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFEDLRAIREEKQPSPNS 115

BLAST of CcUC10G187630 vs. ExPASy TrEMBL
Match: A0A6J1GL99 (uncharacterized protein LOC111454968 OS=Cucurbita moschata OX=3662 GN=LOC111454968 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.4e-27
Identity = 75/119 (63.03%), Postives = 85/119 (71.43%), Query Frame = 0

Query: 1   MSLNCLSCQL-LQRTDSERHRDQQIQTYYCSDEFDSSQRSWSGNLSFRPHDRQNRGGFRG 60
           MSLNCLSCQL LQR+DS++  +Q     Y +D+  S  RSWSGNLSFRP  RQN  GFR 
Sbjct: 1   MSLNCLSCQLFLQRSDSDKDLEQH---EYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRV 60

Query: 61  LAENKVAPTGHRRTVSYG-------GKEPRLVRSSGMRRDWSFEDLRTIREEREPSANS 112
             ENKVAP GHRR  S G       GKEPRL+RS+GMRRDWSFEDLR IRE++E S NS
Sbjct: 61  RTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSFEDLRAIREDKESSPNS 116

BLAST of CcUC10G187630 vs. ExPASy TrEMBL
Match: A0A6J1L834 (uncharacterized protein LOC111500186 OS=Cucurbita maxima OX=3661 GN=LOC111500186 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.7e-26
Identity = 69/110 (62.73%), Postives = 79/110 (71.82%), Query Frame = 0

Query: 1   MSLNCLSCQLLQRTDSERHRDQQIQTYYCSDEFDSSQRSWSGNLSFRPHDRQNRGGFRGL 60
           M+LNCLSCQLLQRTDSER  D Q+Q YY S + + S RSWSGNLSFRP DR  +   R L
Sbjct: 1   MTLNCLSCQLLQRTDSERDPDPQLQNYY-SGQIEPSGRSWSGNLSFRPPDRPKKEALRAL 60

Query: 61  AENKVAPTGHRR-----TVSYGGKEPRLVRSSGMRRDWSFEDLRTIREER 106
            E++  P   RR      +S G KEP+LVRSSGMRRDWSFEDLR IREE+
Sbjct: 61  PEDQAPPVAPRRLHSSGPISLGSKEPKLVRSSGMRRDWSFEDLRAIREEK 109

BLAST of CcUC10G187630 vs. TAIR 10
Match: AT2G35215.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46770.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 4.5e-10
Identity = 42/108 (38.89%), Postives = 58/108 (53.70%), Query Frame = 0

Query: 1   MSLNCLSCQLLQRTDSER----HRDQQIQTYYCSDEFDSSQRSWSGNLSFRPHDRQNRGG 60
           MSLNCL+C +LQRTDS+R     +D   +  + +  F+   R    N S  P  R+   G
Sbjct: 1   MSLNCLACHILQRTDSDRDMGSRKDSSFKENFATSAFEKMVR----NRSSLPVVRRVNKG 60

Query: 61  FRGLAENKVAPTGHRRTVSYGGKEPRLVRSSGMRRDWSFEDLRTIREE 105
            R L    +   G          EP+LVRSSG+RRDWSFEDL+  +++
Sbjct: 61  HRRLYSADIMVYGEL-------DEPKLVRSSGIRRDWSFEDLKKHKDQ 97

BLAST of CcUC10G187630 vs. TAIR 10
Match: AT5G46770.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 5.6e-08
Identity = 50/133 (37.59%), Postives = 66/133 (49.62%), Query Frame = 0

Query: 1   MSLNCLSCQLLQRTDSERHRD------------QQIQTYYCSDEFDSSQRSWSGNLSFRP 60
           MSLNCLSCQ L RTDS +  D              +    C +      R+WSGNLS R 
Sbjct: 1   MSLNCLSCQALPRTDSNKDVDLSGPGPPRVEINNVLGKTCCVNPIGG--RNWSGNLSPRI 60

Query: 61  HDRQNRGGFRGLAE--NKVAPTGHRR----------TVSYGGKEPRLVRSSGMRRDWSFE 107
           +++  R G   LA    KV    H R           V    ++P+LVRS+G+RR+WSFE
Sbjct: 61  YEKIGRPG-SSLAHKMKKVKKIHHVRLSGPVGSSPSNVPTRPEQPKLVRSTGVRRNWSFE 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038905810.11.2e-4991.74uncharacterized protein LOC120091761 [Benincasa hispida][more]
XP_008448684.18.5e-4384.82PREDICTED: uncharacterized protein LOC103490783 [Cucumis melo] >KAA0053043.1 unc... [more]
XP_031737872.12.3e-4073.11uncharacterized protein LOC116402546 [Cucumis sativus][more]
KAE8650028.11.2e-3673.64hypothetical protein Csa_011525 [Cucumis sativus][more]
XP_023539506.14.5e-2864.71uncharacterized protein LOC111800149 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UAS34.1e-4384.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BJN64.1e-4384.82uncharacterized protein LOC103490783 OS=Cucumis melo OX=3656 GN=LOC103490783 PE=... [more]
A0A0A0L1983.9e-4175.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011635 PE=4 SV=1[more]
A0A6J1GL992.4e-2763.03uncharacterized protein LOC111454968 OS=Cucurbita moschata OX=3662 GN=LOC1114549... [more]
A0A6J1L8342.7e-2662.73uncharacterized protein LOC111500186 OS=Cucurbita maxima OX=3661 GN=LOC111500186... [more]
Match NameE-valueIdentityDescription
AT2G35215.14.5e-1038.89unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G46770.15.6e-0837.59unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..57
NoneNo IPR availablePANTHERPTHR36019PLANT/PROTEINcoord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC10G187630.1CcUC10G187630.1mRNA