CcUC10G187550 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC10G187550
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr10: 1566482 .. 1566891 (+)
RNA-Seq ExpressionCcUC10G187550
SyntenyCcUC10G187550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTGATGGAGGACGTTTGGATATGAAGGTCGAAATGATGATCGTGGGATTGGATATGGTAATAGTGGCGGATATGGAAGTGTAGGAGGACGTGGTGATGGTTATGATAGCAATGTTGGTGGAGGCTATGGAAATCACTATGGCCCTCCCCTTAGAGGTAGAGGAAGTGGCAATGGCTAGGGAGATTCTAGTGGATATGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGTGGTGGCTATGGTGGTGGTAGTGGAAGTGTTGGTTATGGCAATGGTGGTGTTCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGATATGATGGTGGGTATGCTGTCAAAAATTCCATCTCAAAGGAGAACTAAGAAACCTTTTCTTAAATAA

mRNA sequence

ATGAAGGAGGACGTGGTGATGGTTATGATAGCAATGTTGGTGGAGGCTATGGAAATCACTATGGCCCTCCCCTTAGAGGTAGAGGAAGTGGCAATGGCTAGGGAGATTCTAGTGGATATGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGTGGTGGCTATGGTGGTGGTAGTGGAAGTGTTGGTTATGGCAATGGTGGTGTTCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGATATGATGGTGGGTATGCTGTCAAAAATTCCATCTCAAAGGAGAACTAAGAAACCTTTTCTTAAATAA

Coding sequence (CDS)

ATGAAGGAGGACGTGGTGATGGTTATGATAGCAATGTTGGTGGAGGCTATGGAAATCACTATGGCCCTCCCCTTAGAGGTAGAGGAAGTGGCAATGGCTAGGGAGATTCTAGTGGATATGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGTGGTGGCTATGGTGGTGGTAGTGGAAGTGTTGGTTATGGCAATGGTGGTGTTCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGATATGATGGTGGGTATGCTGTCAAAAATTCCATCTCAAAGGAGAACTAAGAAACCTTTTCTTAAATAA

Protein sequence

MKEDVVMVMIAMLVEAMEITMALPLEVEEVAMAREILVDMEHVTMGMGVVEELVVAMVVVVEVLVMAMVVFMEENMIIAKEVEKKEDMMVGMLSKIPSQRRTKKPFLK
Homology
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BLAST of CcUC10G187550 vs. ExPASy TrEMBL
Match: A0A0A0L565 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011060 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.7e-05
Identity = 43/73 (58.90%), Postives = 47/73 (64.38%), Query Frame = 0 

Query: 35  EILVDMEHVTMGMGVVEELVVAMVVVVEVLVMAMVVFMEENMIIAKEVEKKEDMMVGMLS 94
           EIL DM+ VT+ M VVEEL  A         MAM  FME +MIIAKEVEKK  MMV MLS
Sbjct: 2   EILTDMKDVTVDMEVVEELAEA---------MAMEEFMEGSMIIAKEVEKKGVMMVDMLS 61

Query: 95  KIPSQRRTKKPFL 108
           KIPSQ R +   L
Sbjct: 62  KIPSQTRIENSLL 65

The following BLAST results are available for this feature:
BLAST of CcUC10G187550 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC10G187550 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC10G187550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5655.7e-0558.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011060 PE=4 SV=1[more]
BLAST of CcUC10G187550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC10G187550.1CcUC10G187550.1mRNA