CcUC10G187370 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTTGTTCTTCTCGGTTTCCGACAAATCTCAGCCACCCACGTGTCCCCAACTCCAGGTAATCATCATCTTGGGGCGACACAGCATAACAAAACCCGTTCCACCTCTTCATAATCATCATTCTCCTTCTCTCTCCTCCCTCGTCATCGTCGTCTTCCTCTCTCTAAAAAGTTGAATTCCTTTCCCTCTCTCATTGCGAATTCCTCAAAGGCCAATCTTCAATTGCCGTAATTCGCCCCTTCCCCATTTGAGGATTCCTCTGATCCTCCTTCACAGGAACGGCTTCATCGTTTATTCCCCCGATCCTCTTTTCCAGGGGAGAATTGTTCTGTTTTTTCTCTTGAATTTCGCTTTGTTTTCAATCGATTTGTTCTTGTTTTTCTCTCTCTTCGGAAAGGTTAAGATCTCGGCGACATGAGCTTTCAAGATATCGAGGCTGGTCGCCCCTTTGCTTCTTCGAGGAGAGACCTCATCAATGGCAAACAAGATCCCACGCAAGCCGTTGCTTCGGGCATATTTCAGATTAATACTGCCGTCGCTACGTTTCAGAGGCTTGTTAATACCTTAGGAACACCGAAGGATACGCCTGAGCTACGAGAGAAGCTGTGAGTTTCTGTTATTTGTTATTATGGTTTCTTCTTATTGTTTTGCTGTTAGGGTTCCTGAATTGTATGACTCGTCGATGATATCCATTGCGTTTTCAATGTATTGTTGAATTTTGTGAATTGATGTCTGTTTGTTGGATTTTCGAATCGCTATTACTATGAGGAGGGTTCGACGATGCGGTTCGCTTCCTGTTGATTGTTTCCGTATAAATCTTAGGTTCCTTTTGAGTCTTGTCTTGTACGTTATCCTTGGCGTTTGTTTTTCCCCTGATGGAGGGATTCTCTAGGAAAAAATTCTGACCATGGAAAAGATCTGCATGGGAGTTATTCATGGTTTGGACTAGCGCCATCACGTCCTTGGGAACGGGTATCTTAGTCCTAAATTTCTATGCAGTTCCAGTTTCTAGAGCTCTTAGTGTTTGTCTCTCCTAACTTTTGTTGGGAGCAGTATTGGAAGTAATAGAAACCATGTGAGATTCGAGTCGGTCTACTTGGTTGGTAATAGAAACTATATGAGGCTAGGCTATGACCTTATATAATATGTACATATAAGTACACGCACATGCGTTTGCACATATGTTGATGAATGTTTCTCCTAATGGTTAGAAGCCTTGGATTAAGAGTTGAGAACAATGAGATACGGATCAGATAAGGAACACCATCCCAAAGATAGGGCATTGGTGTATAAATAATCCTTAATATTTTCTGCGATCAATGATATGTATTTCATCATAAAAAGGCCTATGATTTCTCTTGATCTCAACCGCCCTAATTATTGCCATCGCTGCATTGACTCAGATTCATAAACTCTAGCCCCCAAGGCCATAGCCAATTGGACATATCTTTAAAAGTTCTTTGGTTCCTCTATGCCAAATCTTCCATGAAGTAGCTGCCACAAATCTTAGTTTTCCTCTTAAGAATTTGACCTGCGAAGTTGTTGTTTTATTTCTTCTTTGGTACTCTTGGGGAGATACCACTTGGCTTCAAAAGGTCTTCAGAAGTTTTCTCTCACATGGTTGCTATAGGGACTCTGCAAAAAAAGAACTGATCACCGTCTATGTGGTTGCTTTTACAAAGGCCACGCCAGGACAACTAGTAAATGTGTAGCTGTCTTGAATGAATAGCATTTGCAGTATTTGGCCTTGTAAAACGAAAAACACTGCTAGACTCCTTTCAGTCCAAAGAATCTCTTTTAACATGATATACAAGTATGGTCATTAGATGATTTGCAGCATTTTGTTTCAAATATGATGATTGTGATATTTTCACTAGCACACACAAAAACATCTTCCCCATCAATATCTGTTTTTTTCTTCAAATAAATAAATTCAAAATACCTGGGATCTCATAGTAATTTCATCCTTTATTTTTGTGTGCCCTTTTTATACAGTTGTCATGATGGTGATTGTGTCCATGCAATGATGCATAACTTCTAAACTTTTAATTTCATATAACAATTGGAACTGACATATGATTCACTCCTCATTGAGTAATTAAACTTGCCTGTAAATTATCTCCGAGATGCCACAATTTTATTTATCTTCAATTTTCATGTTGATTTTTTTTCCTACCAAAAAATGTTTTAATCCTTTATTGACCCCTTGCAGGCACAAGACCAGGTTACATATTGGACAGTTGGTTAAAGATACATCCGCTAAACTTAAACAAGCCAGCGAAATAGATCATCACGCTGAAGTTAATGTAAGCTATCTCCAAAAATCTCCTCATTGAAAGATTTAACTTTTCCAATTTGAATGCACTGTGGATTTGGTCACTATGAAATTATGAAGTGGCACTCTATGATGGCAGGTTACATTATCTAGCTTCCATCACTATCTTTCGTTCTGCATGCATAGTTTTATATGAATTGATGTATTGGCTATTGTTTTAGTCTGAATATCTGTCTGGAAAATTGTGGGCTGTTTTCTGGAATCTACAGATTCTACTACCGTCAGTGATTATGATATGATGAGAAGAGGTTTAGTTTGGATGTCAAATCCTACTTGCATAGTAGGAGTATAATTGCATAATATCTCCTTGTTGTAGTAGAATTGGAGTTAGTATCTCTCTGATCCATTAATGAGGATAGAATATGATTATGAGTTGGGGCATGAAGTATATTAGATACCTATTAGTAACTTGAAATTTATCCCTCTCCTACTTTCTCAAACAATATGATAATTCTGCAGGCTAGCAAGAAAATTGCAGATGCTAAACTTGCGAAAGATTTTCAAGCAGTGTTGAAGGAATTTCAGAAGGCTCAACGACTTGCAGCTGAGAGGGAAACAGCATATACACCTTTTGTTCCCCAAACTGTTCTACCTTCTAGGTATGTCAGGTTTATTATAACTATATGTACTTTTTTGTTATTTCTTTTTTTTTTTCTTTAAAAAAGAGAATAAAAGAAAAAGTAATCCCATTTCATTAAAAGGGGAAGGATGTGAAAAAGAGGTAAGCCATTCACCCAAAGAAATGTGTTGGATTGCTCCTTCTGGTATGAGTTATTTGCACCTGCACGGTGTATTTGTTGATTACAAACTACGTTGGATTTACTTGAGAATATTGATTTCCCTTGGTTTTTAGTACATTATTATAATCATTAACGTTGAAATGCATTTTGGTTTTGGTTGGAACCTATATACAGCTACACAGCCGGCGAGGCAGATGCAAGCTCAGAAAAGAATCTTGAACAACGTGCCCTCCTTGTGGAATCCAGGAGGTAACAGTTTTTCTCTGTATTTTGTTGCTAGGTGATTCATTGTTGGGTTAGACTAAGAACTTCGGAAAGTATAATGTTTATGCAGCTGAATTATGTTTCAAATACTCTGCACTATGTAGTATGTACTGATGAAATGATGTTGGAGTTGGACCCTGTATGCAAGAACATGATTTCATATAAACACATAGTGCCAAAAACTGTTTATAGGAGTTATTTTGTCCTTTTCCTTTTGGGGTTTTTTCTTCAGTAGTAGGTGTTATTTTGTTGCAAAAAACAAAGTACTGTATAAATCAGCATTAGCAAATAATAAAAGGAAGTGAAATTATGTGTCATTACCCTCTTTTCTTGCTTCTCAAACAGTGATTCTAAATTTTTGGGTTCCATAGGATGTGCGATGTGCCTGTTCTGCGTAATGTTTTCTGCCATGCTAAATACGATTTCTCTAGAATTTGCTTCCTCTTTCCTACTTACTACTTAGCGACTTGATTATAATTAGGCAGGTTCATGTGTTTCTTCTAATTTTGATTGATGGTTTGTGCAGACAAGAGGTCTTGCTGTTAGACAATGAAATAGCCTTCAATGAGGCAATAATTGAGGAAAGAGAGCAAGGCATTCATGAAATCCAGCAGCAAATTGGAGAAGTGAATGAAATCTTTAAAGATCTTGCAGTTCTAGTCCATGAACAGGGAGCCATGATTGGTAAAGTTACTTTAGTTTATAAAGTTGCAGGTTTGTGTGTAGCTCAAGTTATTCATGTATACATCACCATGCTTGTAGATGATATTGGATCCAACATAGAGGGTGCCCATGCTGCAACGTCACAGGGAACAACTCAGCTTGCAAAAGCTTCAAAGACACAGAGATCAAATTCATCTCTGGTGAGCCCTTACTTTTCCTTATATTTGTCAGGAATTTTTTGTTTTTTGTTTTTTAATTTTTTTTTTTAATTTTAATATTTTATTTACGTTCCCCATTTGGAGGGTCAGTCTAGGTGAACTCATAGGAGGGTAGAAAGTGGAAAGAGTGACACCCTTTGGTGTTTCTCATTACGTTTACAGCTCTTAGATGTAGGTTGAAGTTGTGTAAGACTTGCATACTTGAATATTGAACTTGTTCTTTTCTCATTACATTTACATCCATGCATGTCCATGAATTGAATATTGAACTTGAACTTTTCTCATTTCATTCAAAAGTGGTTTTAAGATCACTGTGTAACACTTAAATACTCCAAATCAATAGGCATTGGAGTACTTGTGCTTTTTCATGCATAAGAACCACAAACATGATAACTCTGTCAGGTGTTTCCTACAATCTAATTCTTTTTTCTTTTTTCTTTTTTTTCTTTTATTTGATTGACAGGCTTGTTTACTTTTGGTGATATTTGGTATTATCCTCCTCATTGTGATCATAATAGTTGTTGCTTAAAAGAAAAAAGTTGCATTGACTTGACTCGAGTAACTTGCTGCTGTTGTGGCAAGTAGATCAATTCTCCTGTTAGTTTCTTTTGATAAGTTTACATTGTCTTGGATCCTGCCTTCTGGGGAAAGGAAGGGTAGTGAAGGGGCTCTATGTATACTATGTCGATCCGCCTTCAGAGTATACATCGCTTCTGTCAGGCCGACCATCCTCTTCCATTTGAAAATGTTATAACCTTTTTGTGTGAAGGTGTGCAACCCGCTTGTTTCTTCTTCTCTTTTTTAATTATTCAATTATATTGATAAATTATTTTTCTTCTCACTTCGCTTCAATGTACTGTTGTGTGTTGCACACAAAGCAGTTACCCCATTCGCATCTTGGCTGGTAAAATGCAATGGGAGAGAGACTGTCTCTCTCTCTCTCTCACTCT ATGTCGTTGAACGGCTTCATCGTTTATTCCCCCGATCCTCTTTTCCAGGGGAGAATTGTTCTGTTTTTTCTCTTGAATTTCGCTTTGTTTTCAATCGATTTGTTCTTGTTTTTCTCTCTCTTCGGAAAGGATCTCGGCGACATGAGCTTTCAAGATATCGAGGCTGGTCGCCCCTTTGCTTCTTCGAGGAGAGACCTCATCAATGGCAAACAAGATCCCACGCAAGCCGTTGCTTCGGGCATATTTCAGATTAATACTGCCGTCGCTACGTTTCAGAGGCTTGTTAATACCTTAGGAACACCGAAGGATACGCCTGAGCTACGAGAGAAGCTGCACAAGACCAGGTTACATATTGGACAGTTGGTTAAAGATACATCCGCTAAACTTAAACAAGCCAGCGAAATAGATCATCACGCTGAAGTTAATGCTAGCAAGAAAATTGCAGATGCTAAACTTGCGAAAGATTTTCAAGCAGTGTTGAAGGAATTTCAGAAGGCTCAACGACTTGCAGCTGAGAGGGAAACAGCATATACACCTTTTGTTCCCCAAACTGTTCTACCTTCTAGCTACACAGCCGGCGAGGCAGATGCAAGCTCAGAAAAGAATCTTGAACAACGTGCCCTCCTTGTGGAATCCAGGAGACAAGAGGTCTTGCTGTTAGACAATGAAATAGCCTTCAATGAGGCAATAATTGAGGAAAGAGAGCAAGGCATTCATGAAATCCAGCAGCAAATTGGAGAAGTGAATGAAATCTTTAAAGATCTTGCAGTTCTAGTCCATGAACAGGGAGCCATGATTGGTTTGTGTGTAGCTCAAGTTATTCATGTATACATCACCATGCTTGTAGATGATATTGGATCCAACATAGAGGGTGCCCATGCTGCAACGTCACAGGGAACAACTCAGCTTGCAAAAGCTTCAAAGACACAGAGATCAAATTCATCTCTGGCTTGTTTACTTTTGGTGATATTTGGTATTATCCTCCTCATTGTGATCATAATAGTTGTTGCTTAAAAGAAAAAAGTTGCATTGACTTGACTCGAGTAACTTGCTGCTGTTGTGGCAAGTAGATCAATTCTCCTGTTAGTTTCTTTTGATAAGTTTACATTGTCTTGGATCCTGCCTTCTGGGGAAAGGAAGGGTAGTGAAGGGGCTCTATGTATACTATGTCGATCCGCCTTCAGAGTATACATCGCTTCTGTCAGGCCGACCATCCTCTTCCATTTGAAAATGTTATAACCTTTTTGTGTGAAGGTGTGCAACCCGCTTGTTTCTTCTTCTCTTTTTTAATTATTCAATTATATTGATAAATTATTTTTCTTCTCACTTCGCTTCAATGTACTGTTGTGTGTTGCACACAAAGCAGTTACCCCATTCGCATCTTGGCTGGTAAAATGCAATGGGAGAGAGACTGTCTCTCTCTCTCTCTCACTCT ATGTCGTTGAACGGCTTCATCGTTTATTCCCCCGATCCTCTTTTCCAGGGGAGAATTGTTCTGTTTTTTCTCTTGAATTTCGCTTTGTTTTCAATCGATTTGTTCTTGTTTTTCTCTCTCTTCGGAAAGGATCTCGGCGACATGAGCTTTCAAGATATCGAGGCTGGTCGCCCCTTTGCTTCTTCGAGGAGAGACCTCATCAATGGCAAACAAGATCCCACGCAAGCCGTTGCTTCGGGCATATTTCAGATTAATACTGCCGTCGCTACGTTTCAGAGGCTTGTTAATACCTTAGGAACACCGAAGGATACGCCTGAGCTACGAGAGAAGCTGCACAAGACCAGGTTACATATTGGACAGTTGGTTAAAGATACATCCGCTAAACTTAAACAAGCCAGCGAAATAGATCATCACGCTGAAGTTAATGCTAGCAAGAAAATTGCAGATGCTAAACTTGCGAAAGATTTTCAAGCAGTGTTGAAGGAATTTCAGAAGGCTCAACGACTTGCAGCTGAGAGGGAAACAGCATATACACCTTTTGTTCCCCAAACTGTTCTACCTTCTAGCTACACAGCCGGCGAGGCAGATGCAAGCTCAGAAAAGAATCTTGAACAACGTGCCCTCCTTGTGGAATCCAGGAGACAAGAGGTCTTGCTGTTAGACAATGAAATAGCCTTCAATGAGGCAATAATTGAGGAAAGAGAGCAAGGCATTCATGAAATCCAGCAGCAAATTGGAGAAGTGAATGAAATCTTTAAAGATCTTGCAGTTCTAGTCCATGAACAGGGAGCCATGATTGGTTTGTGTGTAGCTCAAGTTATTCATGTATACATCACCATGCTTGTAGATGATATTGGATCCAACATAGAGGGTGCCCATGCTGCAACGTCACAGGGAACAACTCAGCTTGCAAAAGCTTCAAAGACACAGAGATCAAATTCATCTCTGGCTTGTTTACTTTTGGTGATATTTGGTATTATCCTCCTCATTGTGATCATAATAGTTGTTGCTTAA MSLNGFIVYSPDPLFQGRIVLFFLLNFALFSIDLFLFFSLFGKDLGDMSFQDIEAGRPFASSRRDLINGKQDPTQAVASGIFQINTAVATFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKQASEIDHHAEVNASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQTVLPSSYTAGEADASSEKNLEQRALLVESRRQEVLLLDNEIAFNEAIIEEREQGIHEIQQQIGEVNEIFKDLAVLVHEQGAMIGLCVAQVIHVYITMLVDDIGSNIEGAHAATSQGTTQLAKASKTQRSNSSLACLLLVIFGIILLIVIIIVVA Homology
BLAST of CcUC10G187370 vs. NCBI nr
Match: XP_038903117.1 (syntaxin-22 [Benincasa hispida]) HSP 1 Score: 486.1 bits (1250), Expect = 2.4e-133 Identity = 272/290 (93.79%), Postives = 273/290 (94.14%), Query Frame = 0
BLAST of CcUC10G187370 vs. NCBI nr
Match: XP_022923460.1 (syntaxin-22-like [Cucurbita moschata] >XP_023552503.1 syntaxin-22-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 483.0 bits (1242), Expect = 2.1e-132 Identity = 270/290 (93.10%), Postives = 272/290 (93.79%), Query Frame = 0
BLAST of CcUC10G187370 vs. NCBI nr
Match: XP_008448659.1 (PREDICTED: syntaxin-22 [Cucumis melo]) HSP 1 Score: 481.9 bits (1239), Expect = 4.6e-132 Identity = 270/290 (93.10%), Postives = 272/290 (93.79%), Query Frame = 0
BLAST of CcUC10G187370 vs. NCBI nr
Match: XP_022965320.1 (syntaxin-22-like [Cucurbita maxima]) HSP 1 Score: 481.5 bits (1238), Expect = 6.0e-132 Identity = 269/290 (92.76%), Postives = 271/290 (93.45%), Query Frame = 0
BLAST of CcUC10G187370 vs. NCBI nr
Match: XP_004148749.1 (syntaxin-22 [Cucumis sativus]) HSP 1 Score: 479.2 bits (1232), Expect = 3.0e-131 Identity = 269/290 (92.76%), Postives = 271/290 (93.45%), Query Frame = 0
BLAST of CcUC10G187370 vs. ExPASy Swiss-Prot
Match: P93654 (Syntaxin-22 OS=Arabidopsis thaliana OX=3702 GN=SYP22 PE=1 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 3.3e-101 Identity = 212/290 (73.10%), Postives = 238/290 (82.07%), Query Frame = 0
BLAST of CcUC10G187370 vs. ExPASy Swiss-Prot
Match: O04378 (Syntaxin-23 OS=Arabidopsis thaliana OX=3702 GN=SYP23 PE=1 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 4.2e-88 Identity = 185/263 (70.34%), Postives = 210/263 (79.85%), Query Frame = 0
BLAST of CcUC10G187370 vs. ExPASy Swiss-Prot
Match: Q39233 (Syntaxin-21 OS=Arabidopsis thaliana OX=3702 GN=SYP21 PE=1 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 3.8e-81 Identity = 178/295 (60.34%), Postives = 221/295 (74.92%), Query Frame = 0
BLAST of CcUC10G187370 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 3.6e-47 Identity = 116/215 (53.95%), Postives = 145/215 (67.44%), Query Frame = 0
BLAST of CcUC10G187370 vs. ExPASy Swiss-Prot
Match: O70439 (Syntaxin-7 OS=Mus musculus OX=10090 GN=Stx7 PE=1 SV=3) HSP 1 Score: 115.9 bits (289), Expect = 8.7e-25 Identity = 90/264 (34.09%), Postives = 139/264 (52.65%), Query Frame = 0
BLAST of CcUC10G187370 vs. ExPASy TrEMBL
Match: A0A6J1EBV6 (syntaxin-22-like OS=Cucurbita moschata OX=3662 GN=LOC111431150 PE=3 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 1.0e-132 Identity = 270/290 (93.10%), Postives = 272/290 (93.79%), Query Frame = 0
BLAST of CcUC10G187370 vs. ExPASy TrEMBL
Match: A0A1S3BKU7 (syntaxin-22 OS=Cucumis melo OX=3656 GN=LOC103490761 PE=3 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 2.2e-132 Identity = 270/290 (93.10%), Postives = 272/290 (93.79%), Query Frame = 0
BLAST of CcUC10G187370 vs. ExPASy TrEMBL
Match: A0A6J1HND0 (syntaxin-22-like OS=Cucurbita maxima OX=3661 GN=LOC111465221 PE=3 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 2.9e-132 Identity = 269/290 (92.76%), Postives = 271/290 (93.45%), Query Frame = 0
BLAST of CcUC10G187370 vs. ExPASy TrEMBL
Match: A0A0A0L3W5 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008910 PE=3 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 1.4e-131 Identity = 269/290 (92.76%), Postives = 271/290 (93.45%), Query Frame = 0
BLAST of CcUC10G187370 vs. ExPASy TrEMBL
Match: A0A6J1KV55 (syntaxin-22 OS=Cucurbita maxima OX=3661 GN=LOC111498468 PE=3 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 1.6e-130 Identity = 266/290 (91.72%), Postives = 269/290 (92.76%), Query Frame = 0
BLAST of CcUC10G187370 vs. TAIR 10
Match: AT5G46860.1 (Syntaxin/t-SNARE family protein ) HSP 1 Score: 369.8 bits (948), Expect = 2.4e-102 Identity = 212/290 (73.10%), Postives = 238/290 (82.07%), Query Frame = 0
BLAST of CcUC10G187370 vs. TAIR 10
Match: AT4G17730.1 (syntaxin of plants 23 ) HSP 1 Score: 326.2 bits (835), Expect = 3.0e-89 Identity = 185/263 (70.34%), Postives = 210/263 (79.85%), Query Frame = 0
BLAST of CcUC10G187370 vs. TAIR 10
Match: AT4G17730.2 (syntaxin of plants 23 ) HSP 1 Score: 326.2 bits (835), Expect = 3.0e-89 Identity = 188/278 (67.63%), Postives = 216/278 (77.70%), Query Frame = 0
BLAST of CcUC10G187370 vs. TAIR 10
Match: AT5G16830.1 (syntaxin of plants 21 ) HSP 1 Score: 303.1 bits (775), Expect = 2.7e-82 Identity = 178/295 (60.34%), Postives = 221/295 (74.92%), Query Frame = 0
BLAST of CcUC10G187370 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative ) HSP 1 Score: 190.3 bits (482), Expect = 2.6e-48 Identity = 116/215 (53.95%), Postives = 145/215 (67.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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