CcUC09G183670 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G183670
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Reticulon domain-containing protein
Location	CicolChr09: 35010589 .. 35014523 (-)
RNA-Seq Expression	CcUC09G183670
Synteny	CcUC09G183670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAAGGAAAGAATGGGCATTATGAGTTTGACGAATCTTAGTATTTCATATTGGCAGCGTATGGAGAGGGTGGAGGCTGAGTCAAATTGGGCGAAGGAGCGAGAGCTTGAGAGAGACAGAAATGGCGAATCGCTCGATCAACTCCAAGACAGAAGTAGGCAAACCCTTTGTAGCTTTGATTTGCGGTTCATTGGTTTATTACCATTGCGCTTATCGAAATTCCAGTCTCCTCTCCCTTGTCGCTGACGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCGTAAGCTTTCCCTTCTTTTTCCTCTTTCTTTTATCTGTCTTTCCGCCAAATTATGTGCTTTCTTTGAATCTTTTGTTGGATAAACAGATTATCCTGTTCCTTTGAATCCTATGTGCTTCTAGGGTATGTACTAGATTTGAGAACTTCTTGGAGATTGTCTTGAATGGTTGGAATTTTAGTCGGTTTCACTTCTTTAGAAATGCGATGTTGTTGAACTTAGATTCTCCATCTGTATGCATATCCTTATCCTCGTTATGATCTTGAATTTATATTATTTGAATGCTAAAATTTAAATGATCTGTAGGGTACCAGTGGACCCTCTTGAGTGGCAAATGTCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCAACAGGGCATGATAAGAGGCTTTTTGTTAAGGTATTGCTCTTTGATTATCATTAATTTGTACATTAGTGGCCTATGCAGTTTTGATTAGTATTATTAACTAAGCTTCTTTCAGTGAGTTTTGGGTTATTGTATGAACTCGAACAGGATTTTTTCTTCTTCTTTTTCTTAACTTTTATTTTCTCTGTGAAACATAAATTCCAAAGGAAATTAGAAAGAACACTCACACTGGGCTATAAGAGTAGTAAGGCTATAGATACCCAACAAGTGGCGAGAATATACACCAAGTAACAGCAGGATTAGAAAGATGTTAAAAAAGCAATGGAAGTCCTTTTCCTTTTCCTCAGAAGTACAATGTTTTCTTTCAGTCCAAATGTACCTAATGAGATGTCATTTTTTCTTGAATAGATGGCCGATTAGCCAGTAATGATAAAGAATCCCTCGATAGAGCCATGGACCAATTGAAACAAACGGGTGGTCTCCAAAAGCCCATTAGCGAGACTTTGAAGTTTTCTATCTATCTTACCCCCTCCTTGAAATTGAAAGATTTATGTATGGAAAATTTGAAGGTAGAATTTTGTTTCTCCTCTTGAAATTATTATAACACCGCCCCTGATTAAGCCTGCCTATCTCATCAAAATCCGCCTAAGCCTTTAAACAATTGCAATCCAGTTGTCATGTCAATCTCGTAAACTCTATTATAACTCTATCTCTTTCCTTACCCAGCTTTATTATAAATTGAAGGCAGGCTCCATATATGTCATATTGTGAAAAGATTGCAAATCCTCTTCAAAATAAACTTGCTGCTTTCTTTTCATGAATTTTTCCATCCTTTTCTTCAAAAATTTAATTGGAAAATTTCGTACCATTTCCAAAAAATGACATCTCATTTTTCTCACCAAAAGGACAACAATCCTTCTTTTTCTTCTGTTGCCAGAAAAAGTAGAATATTTAACGTATTTACCTAACGATTTGCACATTTCAACAAACTCATTATAAACATGCAGTCCACGGAGTCATTTCTAATTAACGCACATGGTTCTAGCTTAATTATCTGCTGTTTTGATGGTATTTTGGCATATTAGACTAACAATTACTCATAATGTTGGATCTGTGAAAAAATAGTGTGCATGTTTCTGTTGCCATCCAAAATCTTTCTCAATTATAGCTTTTGTTTGAATTATGGTCAATTGGAGGGCTTTTGTGTTATCACTTTGGCCGGAGTTTGGGTTCCTAAATCTTTTCTTGTAAACTAACATTTTGGAACAAGTGTTTTCCTACCACCTTCCTTGAACGAGATTTGTTCTTTGGGTTATACAACTGTATCTTTATCCTTGAGTTCTGGAACAAGCATTTCCCTTCTCTTGTAAGAGAAAACTTGGTGTGCTAGCATTTCTGTACCATTACTTATAGTGAATCTTGACAAATTTATATAAACATGTCTGAGTGCCATGTGAATTCAAAACCGTTCTTACAACCCATGCAAGGAGTCTAAGATGCTATATTGTAAAAATAAAATAAATATGTATGTATGTATCAGACAAATTGCACAACCGAGGTGTTTGTTCATTTAGATCAAATAATAAACATCGTGTAATTGGTATCAGGTTACATTGATAAACTATGACGTGTCAGCGGCACATATTATAGGTTAAATGGTACAAAATACTTTTGTTCTTCAGCATATCCCTAAGCTTTGAAATTTTTCGTTTTAACTTTTAAACTTCGAAATTGTTCCAATAATACATTTGGAAATTTTCTCTGGGCTTCTATGATGAGTTCTTTTTGTAATTATTTATTAGATCATATTTTGTTAGATTGGAGACCCTTCTTCTAGGGTGCTCCCTTTTGTGGGCTTGGTTTTTTTGTATGTCCTTATATTCTTATAGAATATAGAATTAGTTGCCGCATCAATTTTAATGTCCTTCATTAACAATAGAAAGGAGAAACCACTATAAAAAGATTGAACATGTGAGAGGATCCAAACAAATTTTGCTTACATTTCCCTCTATAGAGCACAAAATGTTTCCAAAGTTAAAAATGAAACTTTTCAAAGTTTAATGATATAATTAAAACTTACTTCAAAGTTCACGAGTATTATACACCTAGTATATGCAACCATTTGCGAGAGCTAAGTTGCTCTACCTAATAAGGTCTTTCAGAGAACCATCCCTTAACAAGAATAGCTGTACAACTGTACTGTCTTTCATCTTGTGCTTGTAAATTAAAGTTATGCAAATGTTTCTATAGGTCGTTGTTTGCCTTTATGCTCTCTCGGTGCTTGGAAGATTGGTTTCAGGTGTTACAGTTGCCTACACTGGTATGTCTGGCCTTTCTACTTGTTTCTATTTCTTCTATCTCACAAGAAAATAAATATGCATGACGATTTGATTGGAGAATTTTCTATGCTCTTCATATTTAATTCCTATACATCTCGTCATGTGGTGGGGCATTGCAGTCAAATTTGTTATACGATCTGATTTACTCGCTTGGCAGTTACACATACTCTATTCACAATTTCACTACACTTTTGTTATAATTTTTAAGATTATTCCGAGACTCATTTCTGTTTATATTAGAGATAATTAGATCCTTGTTGCATATTTATGGAACTAATCTGTCATTGATGCTAGTTGCTCTGAATTGACAGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTTCTATTTCTCCTTTCCTTAGGAGAGGAAACGACCCTACTCCACATCAAGATGCCATCTAATCTTCATTCGTTGTAACCCTGTTTTCTCACTGTAGATGGATTCATCTGTGAATATTTACCGTTAGATTGTTTAGTTGGTGGAAATAGAATTTTGGGAGTCATTGTTGATTACTGATTGACCATTGTGAGTATCTGTTGTTTTTTGTGAAGTTGAGTTGAGTGGTTTGAAAAGGAAAATATTTGCCACGACAGTCACTTGGACTATGCGATATTTGTATCGAAGTTATACAAGGGGATGGGAAAATGTTTGGAAGCAAAGTTTGGTTTGATTGTACGAGAATTTGTTCTATATGTCATACAATTCCGTTATTGACTTCTAAAGTTTGGTTTGCTTGTTTGGTCTTTTTTCGAATCTTACAATTTTTTATTTATTACTTTTTGGTATAACAAGTAGGATATACAGATTTGAACCTCCCATCTTGGCAGGATTTTTAATTAATTATA

mRNA sequence

TGGAAGGAAAGAATGGGCATTATGAGTTTGACGAATCTTAGTATTTCATATTGGCAGCGTATGGAGAGGGTGGAGGCTGAGTCAAATTGGGCGAAGGAGCGAGAGCTTGAGAGAGACAGAAATGGCGAATCGCTCGATCAACTCCAAGACAGAAGTAGGCAAACCCTTTGTAGCTTTGATTTGCGGTTCATTGGTTTATTACCATTGCGCTTATCGAAATTCCAGTCTCCTCTCCCTTGTCGCTGACGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCGGTATGTACTAGATTTGAGAACTTCTTGGAGATTGTCTTGAATGGTTGGAATTTTAGTCGGTTTCACTTCTTTAGAAATGCGATGTTGTTGAACTTAGATTCTCCATCTGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCAACAGGGCATGATAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTATGCTCTCTCGGTGCTTGGAAGATTGGTTTCAGGTGTTACAGTTGCCTACACTGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTTCTATTTCTCCTTTCCTTAGGAGAGGAAACGACCCTACTCCACATCAAGATGCCATCTAATCTTCATTCGTTGTAACCCTGTTTTCTCACTGTAGATGGATTCATCTGTGAATATTTACCGTTAGATTGTTTAGTTGGTGGAAATAGAATTTTGGGAGTCATTGTTGATTACTGATTGACCATTGTGAGTATCTGTTGTTTTTTGTGAAGTTGAGTTGAGTGGTTTGAAAAGGAAAATATTTGCCACGACAGTCACTTGGACTATGCGATATTTGTATCGAAGTTATACAAGGGGATGGGAAAATGTTTGGAAGCAAAGTTTGGTTTGATTGTACGAGAATTTGTTCTATATGTCATACAATTCCGTTATTGACTTCTAAAGTTTGGTTTGCTTGTTTGGTCTTTTTTCGAATCTTACAATTTTTTATTTATTACTTTTTGGTATAACAAGTAGGATATACAGATTTGAACCTCCCATCTTGGCAGGATTTTTAATTAATTATA

Coding sequence (CDS)

ATGGCGAATCGCTCGATCAACTCCAAGACAGAAGTAGGCAAACCCTTTGTAGCTTTGATTTGCGGTTCATTGGTTTATTACCATTGCGCTTATCGAAATTCCAGTCTCCTCTCCCTTGTCGCTGACGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCGGTATGTACTAGATTTGAGAACTTCTTGGAGATTGTCTTGAATGGTTGGAATTTTAGTCGGTTTCACTTCTTTAGAAATGCGATGTTGTTGAACTTAGATTCTCCATCTGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCAACAGGGCATGATAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTATGCTCTCTCGGTGCTTGGAAGATTGGTTTCAGGTGTTACAGTTGCCTACACTGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTTCTATTTCTCCTTTCCTTAGGAGAGGAAACGACCCTACTCCACATCAAGATGCCATCTAA

Protein sequence

MANRSINSKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVCTRFENFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPTPHQDAI

Homology

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BLAST of CcUC09G183670 vs. NCBI nr
Match: XP_038889154.1 (reticulon-like protein B22 [Benincasa hispida])

HSP 1 Score: 285.8 bits (730), Expect = 2.8e-73
Identity = 159/196 (81.12%), Postives = 165/196 (84.18%), Query Frame = 0


Query: 1   MANRSINSKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MANR+IN KTEVGKPFVALICGSL+YYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 16  MANRTINCKTEVGKPFVALICGSLIYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVCTRFENFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESV 120
           MNVSV     + LE     W  S+                DTANSM+AWLANTIGAAESV
Sbjct: 76  MNVSVPV---DPLE-----WQISQ----------------DTANSMVAWLANTIGAAESV 135

Query: 121 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASIS 180
           LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASIS
Sbjct: 136 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASIS 187

Query: 181 PFLRRGNDPTPHQDAI 197
           PF+RRGNDPT HQDAI
Sbjct: 196 PFIRRGNDPTSHQDAI 187

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BLAST of CcUC09G183670 vs. NCBI nr
Match: XP_008465703.1 (PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo])

HSP 1 Score: 276.9 bits (707), Expect = 1.3e-70
Identity = 157/196 (80.10%), Postives = 163/196 (83.16%), Query Frame = 0


Query: 1   MANRSINSKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MA+RSIN KTEVGKPFVAL CGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 16  MASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVCTRFENFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESV 120
           MNVSV     + LE     W  S+                DTANSMIAWLANTIGAAESV
Sbjct: 76  MNVSVPV---DPLE-----WQISQ----------------DTANSMIAWLANTIGAAESV 135

Query: 121 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASIS 180
           LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+IS
Sbjct: 136 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAIS 187

Query: 181 PFLRRGNDPTPHQDAI 197
           PFLRRGN+ T HQDAI
Sbjct: 196 PFLRRGNERTSHQDAI 187

[Close]

BLAST of CcUC09G183670 vs. NCBI nr
Match: XP_022952032.1 (reticulon-like protein B22 isoform X1 [Cucurbita moschata] >XP_022973272.1 reticulon-like protein B22 isoform X1 [Cucurbita maxima] >XP_023536692.1 reticulon-like protein B22 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6585840.1 Reticulon-like protein B22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 274.2 bits (700), Expect = 8.5e-70
Identity = 156/196 (79.59%), Postives = 161/196 (82.14%), Query Frame = 0


Query: 1   MANRSINSKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MANRSI+ KTEVGKP VALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 16  MANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVCTRFENFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESV 120
           MNVSV     + LE     W  S+                DTANSMIAWLANTIGAAESV
Sbjct: 76  MNVSVPV---DPLE-----WQISQ----------------DTANSMIAWLANTIGAAESV 135

Query: 121 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASIS 180
           LRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA IS
Sbjct: 136 LRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFIS 187

Query: 181 PFLRRGNDPTPHQDAI 197
           PFLRRGNDP  HQD+I
Sbjct: 196 PFLRRGNDPISHQDSI 187

[Close]

BLAST of CcUC09G183670 vs. NCBI nr
Match: XP_011655303.1 (reticulon-like protein B22 [Cucumis sativus] >KGN51194.1 hypothetical protein Csa_009004 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-69
Identity = 156/196 (79.59%), Postives = 162/196 (82.65%), Query Frame = 0


Query: 1   MANRSINSKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MA+RSIN KTEVGKPFVALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 17  MASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 76

Query: 61  MNVSVCTRFENFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESV 120
           MNVSV     + LE     W  S+                DTANSMIAWLANTIGAAESV
Sbjct: 77  MNVSVPV---DPLE-----WQVSQ----------------DTANSMIAWLANTIGAAESV 136

Query: 121 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASIS 180
           LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+IS
Sbjct: 137 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAIS 188

Query: 181 PFLRRGNDPTPHQDAI 197
           P LRRGN+ T HQD I
Sbjct: 197 PILRRGNERTSHQDDI 188

[Close]

BLAST of CcUC09G183670 vs. NCBI nr
Match: XP_022150304.1 (reticulon-like protein B22 [Momordica charantia])

HSP 1 Score: 265.4 bits (677), Expect = 3.9e-67
Identity = 146/196 (74.49%), Postives = 159/196 (81.12%), Query Frame = 0


Query: 1   MANRSINSKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MANR+I+S T++GKP VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 13  MANRTIHSTTQLGKPMVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 72

Query: 61  MNVSVCTRFENFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESV 120
           MN+SV     + LE     W  S+                DTAN ++AWLANTIGAAESV
Sbjct: 73  MNISVPV---DPLE-----WQISQ----------------DTANGLVAWLANTIGAAESV 132

Query: 121 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASIS 180
           LRVAATGHDKRLF+KVVVCLYALSVLGRLVSGVTVAYTGLCMLC+YMVLENSES S S+ 
Sbjct: 133 LRVAATGHDKRLFLKVVVCLYALSVLGRLVSGVTVAYTGLCMLCVYMVLENSESTSGSVF 184

Query: 181 PFLRRGNDPTPHQDAI 197
           PF RRGNDPT HQDAI
Sbjct: 193 PFSRRGNDPTSHQDAI 184

[Close]

BLAST of CcUC09G183670 vs. ExPASy Swiss-Prot
Match: Q8GWH5 (Reticulon-like protein B22 OS=Arabidopsis thaliana OX=3702 GN=RTNLB22 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.4e-43
Identity = 105/185 (56.76%), Postives = 129/185 (69.73%), Query Frame = 0


Query: 11  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVCTRFE 70
           E+GK    LI G+LVYYHCAYRN++LLSL +DVFIVLLCSLAILGLLFR +NVSV     
Sbjct: 3   EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPV--- 62

Query: 71  NFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESVLRVAATGHDK 130
           + LE     W  S+                DTA++++A LANT+GAAE VLRVAATGHDK
Sbjct: 63  DPLE-----WQISQ----------------DTASNIVARLANTVGAAEGVLRVAATGHDK 122

Query: 131 RLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPT 190
           RLFVKVV+CLY LS LGRL+SGVTVAY GLC+ C+ M+ + S+S+   +   L+RGN   
Sbjct: 123 RLFVKVVICLYFLSALGRLISGVTVAYAGLCLFCLSMLCQTSQSLGNCV---LKRGNGQI 160

Query: 191 PHQDA 196
             Q+A
Sbjct: 183 LEQEA 160

[Close]

BLAST of CcUC09G183670 vs. ExPASy Swiss-Prot
Match: P0C941 (Reticulon-like protein B23 OS=Arabidopsis thaliana OX=3702 GN=RTNLB23 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.8e-38
Identity = 93/162 (57.41%), Postives = 116/162 (71.60%), Query Frame = 0


Query: 11  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVCTRFE 70
           E+GK    LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSV     
Sbjct: 3   EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPV--- 62

Query: 71  NFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESVLRVAATGHDK 130
           + LE     W  S+                DTA +++A LANT+GAAESVLRVAATGHDK
Sbjct: 63  DPLE-----WQISQ----------------DTACNIVARLANTVGAAESVLRVAATGHDK 122

Query: 131 RLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS 173
           RLFVKVV+CLY L+ LGR++SGVT+AY GLC+ C+ M+  +S
Sbjct: 123 RLFVKVVICLYFLAALGRIISGVTIAYAGLCLFCLSMLFRSS 140

[Close]

BLAST of CcUC09G183670 vs. ExPASy TrEMBL
Match: A0A1S3CPH6 (reticulon-like protein B22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503325 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.3e-71
Identity = 157/196 (80.10%), Postives = 163/196 (83.16%), Query Frame = 0


Query: 1   MANRSINSKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MA+RSIN KTEVGKPFVAL CGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 16  MASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVCTRFENFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESV 120
           MNVSV     + LE     W  S+                DTANSMIAWLANTIGAAESV
Sbjct: 76  MNVSVPV---DPLE-----WQISQ----------------DTANSMIAWLANTIGAAESV 135

Query: 121 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASIS 180
           LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+IS
Sbjct: 136 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAIS 187

Query: 181 PFLRRGNDPTPHQDAI 197
           PFLRRGN+ T HQDAI
Sbjct: 196 PFLRRGNERTSHQDAI 187

[Close]

BLAST of CcUC09G183670 vs. ExPASy TrEMBL
Match: A0A6J1I734 (reticulon-like protein B22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471842 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.1e-70
Identity = 156/196 (79.59%), Postives = 161/196 (82.14%), Query Frame = 0


Query: 1   MANRSINSKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MANRSI+ KTEVGKP VALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 16  MANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVCTRFENFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESV 120
           MNVSV     + LE     W  S+                DTANSMIAWLANTIGAAESV
Sbjct: 76  MNVSVPV---DPLE-----WQISQ----------------DTANSMIAWLANTIGAAESV 135

Query: 121 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASIS 180
           LRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA IS
Sbjct: 136 LRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFIS 187

Query: 181 PFLRRGNDPTPHQDAI 197
           PFLRRGNDP  HQD+I
Sbjct: 196 PFLRRGNDPISHQDSI 187

[Close]

BLAST of CcUC09G183670 vs. ExPASy TrEMBL
Match: A0A6J1GJ96 (reticulon-like protein B22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454742 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.1e-70
Identity = 156/196 (79.59%), Postives = 161/196 (82.14%), Query Frame = 0


Query: 1   MANRSINSKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MANRSI+ KTEVGKP VALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 16  MANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVCTRFENFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESV 120
           MNVSV     + LE     W  S+                DTANSMIAWLANTIGAAESV
Sbjct: 76  MNVSVPV---DPLE-----WQISQ----------------DTANSMIAWLANTIGAAESV 135

Query: 121 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASIS 180
           LRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA IS
Sbjct: 136 LRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFIS 187

Query: 181 PFLRRGNDPTPHQDAI 197
           PFLRRGNDP  HQD+I
Sbjct: 196 PFLRRGNDPISHQDSI 187

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BLAST of CcUC09G183670 vs. ExPASy TrEMBL
Match: A0A0A0KQM7 (Reticulon domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487710 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.3e-70
Identity = 156/196 (79.59%), Postives = 162/196 (82.65%), Query Frame = 0


Query: 1   MANRSINSKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MA+RSIN KTEVGKPFVALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 17  MASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 76

Query: 61  MNVSVCTRFENFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESV 120
           MNVSV     + LE     W  S+                DTANSMIAWLANTIGAAESV
Sbjct: 77  MNVSVPV---DPLE-----WQVSQ----------------DTANSMIAWLANTIGAAESV 136

Query: 121 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASIS 180
           LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+IS
Sbjct: 137 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAIS 188

Query: 181 PFLRRGNDPTPHQDAI 197
           P LRRGN+ T HQD I
Sbjct: 197 PILRRGNERTSHQDDI 188

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BLAST of CcUC09G183670 vs. ExPASy TrEMBL
Match: A0A6J1D9M0 (reticulon-like protein B22 OS=Momordica charantia OX=3673 GN=LOC111018504 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.9e-67
Identity = 146/196 (74.49%), Postives = 159/196 (81.12%), Query Frame = 0


Query: 1   MANRSINSKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 60
           MANR+I+S T++GKP VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRH
Sbjct: 13  MANRTIHSTTQLGKPMVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 72

Query: 61  MNVSVCTRFENFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESV 120
           MN+SV     + LE     W  S+                DTAN ++AWLANTIGAAESV
Sbjct: 73  MNISVPV---DPLE-----WQISQ----------------DTANGLVAWLANTIGAAESV 132

Query: 121 LRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASIS 180
           LRVAATGHDKRLF+KVVVCLYALSVLGRLVSGVTVAYTGLCMLC+YMVLENSES S S+ 
Sbjct: 133 LRVAATGHDKRLFLKVVVCLYALSVLGRLVSGVTVAYTGLCMLCVYMVLENSESTSGSVF 184

Query: 181 PFLRRGNDPTPHQDAI 197
           PF RRGNDPT HQDAI
Sbjct: 193 PFSRRGNDPTSHQDAI 184

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BLAST of CcUC09G183670 vs. TAIR 10
Match: AT1G78895.1 (Reticulon family protein )

HSP 1 Score: 176.8 bits (447), Expect = 1.7e-44
Identity = 105/185 (56.76%), Postives = 129/185 (69.73%), Query Frame = 0


Query: 11  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVCTRFE 70
           E+GK    LI G+LVYYHCAYRN++LLSL +DVFIVLLCSLAILGLLFR +NVSV     
Sbjct: 3   EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPV--- 62

Query: 71  NFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESVLRVAATGHDK 130
           + LE     W  S+                DTA++++A LANT+GAAE VLRVAATGHDK
Sbjct: 63  DPLE-----WQISQ----------------DTASNIVARLANTVGAAEGVLRVAATGHDK 122

Query: 131 RLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLRRGNDPT 190
           RLFVKVV+CLY LS LGRL+SGVTVAY GLC+ C+ M+ + S+S+   +   L+RGN   
Sbjct: 123 RLFVKVVICLYFLSALGRLISGVTVAYAGLCLFCLSMLCQTSQSLGNCV---LKRGNGQI 160

Query: 191 PHQDA 196
             Q+A
Sbjct: 183 LEQEA 160

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BLAST of CcUC09G183670 vs. TAIR 10
Match: AT1G16825.1 (Reticulon family protein )

HSP 1 Score: 158.7 bits (400), Expect = 4.8e-39
Identity = 93/162 (57.41%), Postives = 116/162 (71.60%), Query Frame = 0


Query: 11  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVCTRFE 70
           E+GK    LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSV     
Sbjct: 3   EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPV--- 62

Query: 71  NFLEIVLNGWNFSRFHFFRNAMLLNLDSPSDTANSMIAWLANTIGAAESVLRVAATGHDK 130
           + LE     W  S+                DTA +++A LANT+GAAESVLRVAATGHDK
Sbjct: 63  DPLE-----WQISQ----------------DTACNIVARLANTVGAAESVLRVAATGHDK 122

Query: 131 RLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS 173
           RLFVKVV+CLY L+ LGR++SGVT+AY GLC+ C+ M+  +S
Sbjct: 123 RLFVKVVICLYFLAALGRIISGVTIAYAGLCLFCLSMLFRSS 140

The following BLAST results are available for this feature:

BLAST of CcUC09G183670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889154.1	2.8e-73	81.12	reticulon-like protein B22 [Benincasa hispida]	[more]
XP_008465703.1	1.3e-70	80.10	PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]	[more]
XP_022952032.1	8.5e-70	79.59	reticulon-like protein B22 isoform X1 [Cucurbita moschata] >XP_022973272.1 retic...	[more]
XP_011655303.1	1.1e-69	79.59	reticulon-like protein B22 [Cucumis sativus] >KGN51194.1 hypothetical protein Cs...	[more]
XP_022150304.1	3.9e-67	74.49	reticulon-like protein B22 [Momordica charantia]	[more]

BLAST of CcUC09G183670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWH5	2.4e-43	56.76	Reticulon-like protein B22 OS=Arabidopsis thaliana OX=3702 GN=RTNLB22 PE=2 SV=1	[more]
P0C941	6.8e-38	57.41	Reticulon-like protein B23 OS=Arabidopsis thaliana OX=3702 GN=RTNLB23 PE=2 SV=1	[more]

BLAST of CcUC09G183670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CPH6	6.3e-71	80.10	reticulon-like protein B22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503325 PE...	[more]
A0A6J1I734	4.1e-70	79.59	reticulon-like protein B22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11147184...	[more]
A0A6J1GJ96	4.1e-70	79.59	reticulon-like protein B22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454...	[more]
A0A0A0KQM7	5.3e-70	79.59	Reticulon domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487710 P...	[more]
A0A6J1D9M0	1.9e-67	74.49	reticulon-like protein B22 OS=Momordica charantia OX=3673 GN=LOC111018504 PE=4 S...	[more]

BLAST of CcUC09G183670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78895.1	1.7e-44	56.76	Reticulon family protein	[more]
AT1G16825.1	4.8e-39	57.41	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 16..165 e-value: 1.3E-11 score: 44.7
IPR044177	Reticulon-like protein B22/B23	PANTHER	PTHR47879	RETICULON-LIKE PROTEIN B22	coord: 5..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G183670.1	CcUC09G183670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane