CcUC09G183020 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G183020
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	40S ribosomal protein S15a
Location	CicolChr09: 34381450 .. 34383275 (+)
RNA-Seq Expression	CcUC09G183020
Synteny	CcUC09G183020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGCCGAACTCCGAAGCCCTATAATTCGAACCGAGCCCTATTTTAAACACAATATAAATATATTAGGTTTCAACTCCACTCCTCTCTCTTTTCTCTCAGCCGTTAAAGAAGAAGCCCTAGTCCCCATCCGGAGTCGGCAACTTTCGTCTTCTGGCCTTCTTTCTCTCTCGGGTTTGTTTTTCATATTTATTTATTTCTTCTAGTTGATGATTTAAGCGTATAAGTCGAATTTATATACTGTTCTAGAGATAACTTGGAATTTTTAGTAAGAATTGATTGTATGATTTGTTAATTAATCTTATAGCTTGTTTTTGTTATTCCATGATTTCTATTAGAACTAGGGTTTTACTAATCGGAAGCTATATACATGTTTTTTGTTTTTCGGGTTTGAGATTGGTGGCTGGCAGTTTGTAAAAGAAACTGATATTTATAGTTGTTTGTTTAATTTAGCGGCATTCTTAACTTGAACTTTGGGTATTTCCATATTTGCAGTAACAATGGTGCGTGTGAGCGTTCTGAATGATGCTCTTAAAAGCATGTATAATGCTGAGAAACGGGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATTATCAAGTTTCTTCTTGTTATGCAGAAGCACGGTATATACATTGTTGAGAAATTCATGTCGATCCCATTCTTTGCACCTTAAACTTGTTTGATTTAGATTCTGTTAAAAATTTCATTGTTTTAGGATATATTGGGGAATTTGAGTTCGTTGATGATCATAGATCAGGGAAAATCGTTGTTGAACTGAACGGGAGACTCAACAAATGTGGTGTCATAAGTCCCCGTTTCGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTAAATTTCTTTATTACTTCATTATGCTAAAGATTTGTTTGTATTTTAGCCATAGCTGTTAAATGATATAATAATAAAGTTCCTCATGCCCATACGCATGAGTTTTTGGGTTCCATGATTTAACTTGTATGTAGGTAGTCCAGAGTTGATTTTCACATTTTTGGGTATATAATAGAAGAAACTTTTATAACAAATGACATTGAATTGTTGACAGTTTGGATTCATTGTCTTGACAACATCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAATGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAAGCAATGTCGTGAGATTGATTTTTCTTCTTTTTGGTACTTTCTGTACTTTTGAACTTAAATGGGAAGCAGTGGAGAGTCCTGTTTTGTTTTTAGTTGCTGTTTTGGTTGGTGGGAGAGGATACAGGATTTGACCTGCATTCTTTTTGAAGACGTTGATATTGTTTAATGAGCCCTTTTTTCTTAATCTATGAGTTTTATTTGTTCGCCATACTGAAACTGAAATTCTTGTAGTTATCAAGCTTCAGAATTGATTGCAATTTTCTCAGACTGCAATGATCTGCCCACACCCATCAGTCCGTCTGTTCTATAGCTTGTTTATGTATGATTTCTTCTGCAACTTTTGATGGTTTTTTGGACTGTTCTATTTGATAATTAAACCCTTTGGAGAAATCTAATAATTAATTCTAGAAGTGACAAGAGGAGCCACTCTCAAGTTATCATGATGGGGTTATGGTTCTGTTAGAATGAGTCACTATGATTATGATAAAATGTATAAAAACTTAAAATGTATTAGTTTTTATGGTCTTGAAAATTAGAATTTAGTTCTTATGGTTTGATAAAGAATTCTTATATATAGTTCTTGTAGTTTGATAGAATTTTCATAAATAGACTACTTATGAAGGGCT

mRNA sequence

ATGTGGGCCGAACTCCGAAGCCCTATAATTCGAACCGAGCCCTATTTTAAACACAATATAAATATATTAGGTTTCAACTCCACTCCTCTCTCTTTTCTCTCAGCCGTTAAAGAAGAAGCCCTAGTCCCCATCCGGAGTCGGCAACTTTCGTCTTCTGGCCTTCTTTCTCTCTCGGTAACAATGGTGCGTGTGAGCGTTCTGAATGATGCTCTTAAAAGCATGTATAATGCTGAGAAACGGGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATTATCAAGTTTCTTCTTGTTATGCAGAAGCACGGATATATTGGGGAATTTGAGTTCGTTGATGATCATAGATCAGGGAAAATCGTTGTTGAACTGAACGGGAGACTCAACAAATGTGGTGTCATAAGTCCCCGTTTCGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGTTTGGATTCATTGTCTTGACAACATCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAATGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAAGCAATGTCGTGAGATTGATTTTTCTTCTTTTTGGTACTTTCTGTACTTTTGAACTTAAATGGGAAGCAGTGGAGAGTCCTGTTTTGTTTTTAGTTGCTGTTTTGGTTGGTGGGAGAGGATACAGGATTTGACCTGCATTCTTTTTGAAGACGTTGATATTGTTTAATGAGCCCTTTTTTCTTAATCTATGAGTTTTATTTGTTCGCCATACTGAAACTGAAATTCTTGTAGTTATCAAGCTTCAGAATTGATTGCAATTTTCTCAGACTGCAATGATCTGCCCACACCCATCAGTCCGTCTGTTCTATAGCTTGTTTATGTATGATTTCTTCTGCAACTTTTGATGGTTTTTTGGACTGTTCTATTTGATAATTAAACCCTTTGGAGAAATCTAATAATTAATTCTAGAAGTGACAAGAGGAGCCACTCTCAAGTTATCATGATGGGGTTATGGTTCTGTTAGAATGAGTCACTATGATTATGATAAAATGTATAAAAACTTAAAATGTATTAGTTTTTATGGTCTTGAAAATTAGAATTTAGTTCTTATGGTTTGATAAAGAATTCTTATATATAGTTCTTGTAGTTTGATAGAATTTTCATAAATAGACTACTTATGAAGGGCT

Coding sequence (CDS)

ATGTGGGCCGAACTCCGAAGCCCTATAATTCGAACCGAGCCCTATTTTAAACACAATATAAATATATTAGGTTTCAACTCCACTCCTCTCTCTTTTCTCTCAGCCGTTAAAGAAGAAGCCCTAGTCCCCATCCGGAGTCGGCAACTTTCGTCTTCTGGCCTTCTTTCTCTCTCGGTAACAATGGTGCGTGTGAGCGTTCTGAATGATGCTCTTAAAAGCATGTATAATGCTGAGAAACGGGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATTATCAAGTTTCTTCTTGTTATGCAGAAGCACGGATATATTGGGGAATTTGAGTTCGTTGATGATCATAGATCAGGGAAAATCGTTGTTGAACTGAACGGGAGACTCAACAAATGTGGTGTCATAAGTCCCCGTTTCGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGTTTGGATTCATTGTCTTGACAACATCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAATGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAA

Protein sequence

MWAELRSPIIRTEPYFKHNINILGFNSTPLSFLSAVKEEALVPIRSRQLSSSGLLSLSVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY

Homology

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BLAST of CcUC09G183020 vs. NCBI nr
Match: XP_037497885.1 (40S ribosomal protein S15a-1 isoform X1 [Jatropha curcas])

HSP 1 Score: 268.9 bits (686), Expect = 3.4e-68
Identity = 132/141 (93.62%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 50  SSSGLLSLSVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGE 109
           +S  LLS S TMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGE
Sbjct: 34  ASLSLLSASATMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGE 93

Query: 110 FEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAG 169
           FE+VDDHR+GKIVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFG+IVLTTSAG
Sbjct: 94  FEYVDDHRAGKIVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGYIVLTTSAG 153

Query: 170 IMDHEEARRKNVGGKVLGFFY 191
           IMDHEEARRKNVGGKVLGFFY
Sbjct: 154 IMDHEEARRKNVGGKVLGFFY 174

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BLAST of CcUC09G183020 vs. NCBI nr
Match: KAF8700839.1 (hypothetical protein HU200_034203 [Digitaria exilis])

HSP 1 Score: 266.2 bits (679), Expect = 2.2e-67
Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 54  LLSLSVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFV 113
           +LS  VTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQ+HGYIGEFE+V
Sbjct: 11  VLSCKVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQRHGYIGEFEYV 70

Query: 114 DDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDH 173
           DDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDH
Sbjct: 71  DDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDH 130

Query: 174 EEARRKNVGGKVLGFFY 191
           EEARRKNVGGKVLGFFY
Sbjct: 131 EEARRKNVGGKVLGFFY 147

[Close]

BLAST of CcUC09G183020 vs. NCBI nr
Match: KHN33076.1 (40S ribosomal protein S15a-1 [Glycine soja])

HSP 1 Score: 265.8 bits (678), Expect = 2.9e-67
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 54  LLSLSVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFV 113
           LL   VTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+V
Sbjct: 44  LLCYLVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYV 103

Query: 114 DDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDH 173
           DDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDH
Sbjct: 104 DDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDH 163

Query: 174 EEARRKNVGGKVLGFFY 191
           EEARRKNVGGKVLGFFY
Sbjct: 164 EEARRKNVGGKVLGFFY 180

[Close]

BLAST of CcUC09G183020 vs. NCBI nr
Match: KAF5467254.1 (hypothetical protein F2P56_017099, partial [Juglans regia])

HSP 1 Score: 265.8 bits (678), Expect = 2.9e-67
Identity = 136/160 (85.00%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 31  SFLSAVKEEALVPIRSRQLSSSGLLSLSVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPS 90
           S L A+   +L+PIR  +           TMVRVSVLNDALKSMYNAEKRGKRQVMIRPS
Sbjct: 12  SVLEALLLNSLLPIRYAKTKQ------IQTMVRVSVLNDALKSMYNAEKRGKRQVMIRPS 71

Query: 91  SKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWT 150
           SKVIIKFLLVMQKHGYIGEFE+VDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWT
Sbjct: 72  SKVIIKFLLVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWT 131

Query: 151 ARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 191
           ARLLPSRQFG+IVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 132 ARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 165

[Close]

BLAST of CcUC09G183020 vs. NCBI nr
Match: PQQ18479.1 (40S ribosomal protein S15a-1 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 265.8 bits (678), Expect = 2.9e-67
Identity = 134/150 (89.33%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 45  RSRQLSSSGLLSLSV----TMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLV 104
           +S+ LS + LL L +    TMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLV
Sbjct: 24  KSQLLSEAPLLILRISSEATMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLV 83

Query: 105 MQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG 164
           MQKHGYIGEFE+VDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG
Sbjct: 84  MQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG 143

Query: 165 FIVLTTSAGIMDHEEARRKNVGGKVLGFFY 191
           +IVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 144 YIVLTTSAGIMDHEEARRKNVGGKVLGFFY 173

[Close]

BLAST of CcUC09G183020 vs. ExPASy Swiss-Prot
Match: P42798 (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 261.5 bits (667), Expect = 7.2e-69
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 61  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 120
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 121 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 180
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 181 VGGKVLGFFY 191
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of CcUC09G183020 vs. ExPASy Swiss-Prot
Match: Q9LX88 (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 261.2 bits (666), Expect = 9.4e-69
Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 61  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 120
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 121 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 180
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 181 VGGKVLGFFY 191
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of CcUC09G183020 vs. ExPASy Swiss-Prot
Match: Q00332 (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 260.0 bits (663), Expect = 2.1e-68
Identity = 125/130 (96.15%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 61  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 120
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 121 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 180
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 181 VGGKVLGFFY 191
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of CcUC09G183020 vs. ExPASy Swiss-Prot
Match: Q9AT34 (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 256.9 bits (655), Expect = 1.8e-67
Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 61  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 120
           MVRVSVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 121 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 180
           IVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 181 VGGKVLGFFY 191
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of CcUC09G183020 vs. ExPASy Swiss-Prot
Match: O80646 (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 243.8 bits (621), Expect = 1.6e-63
Identity = 117/130 (90.00%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 61  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 120
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDHRSGK
Sbjct: 1   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 60

Query: 121 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 180
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFG+IVLTTSAGIMDHEEAR+KN
Sbjct: 61  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKN 120

Query: 181 VGGKVLGFFY 191
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of CcUC09G183020 vs. ExPASy TrEMBL
Match: A0A0A0KZP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608140 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.2e-80
Identity = 159/182 (87.36%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 10  IRTEPYFKHNINILGFNSTPLSFLSAVKE-EALVPIRSRQLSSSGLLSLSVTMVRVSVLN 69
           ++  P     IN LGF  + LSF SAV+E EAL+PIR+ Q SSSGL SLSV MVRVSVLN
Sbjct: 33  LQPSPILNGTINKLGFIFSLLSFHSAVEEAEALIPIRTLQFSSSGLPSLSVIMVRVSVLN 92

Query: 70  DALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGR 129
           DALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGR
Sbjct: 93  DALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGR 152

Query: 130 LNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGF 189
           LNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGF
Sbjct: 153 LNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGF 212

Query: 190 FY 191
           FY
Sbjct: 213 FY 214

[Close]

BLAST of CcUC09G183020 vs. ExPASy TrEMBL
Match: A0A314ZGL2 (40S ribosomal protein S15a-1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_37663 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 134/150 (89.33%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 45  RSRQLSSSGLLSLSV----TMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLV 104
           +S+ LS + LL L +    TMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLV
Sbjct: 24  KSQLLSEAPLLILRISSEATMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLV 83

Query: 105 MQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG 164
           MQKHGYIGEFE+VDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG
Sbjct: 84  MQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG 143

Query: 165 FIVLTTSAGIMDHEEARRKNVGGKVLGFFY 191
           +IVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 144 YIVLTTSAGIMDHEEARRKNVGGKVLGFFY 173

[Close]

BLAST of CcUC09G183020 vs. ExPASy TrEMBL
Match: A0A287M3J9 (30S ribosomal protein S8, chloroplastic OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 132/146 (90.41%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 45  RSRQLSSSGLLSLSVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKH 104
           R R+   S   SL V MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKH
Sbjct: 36  RRRRHGQSSARSLEVRMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKH 95

Query: 105 GYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVL 164
           GYIGE E+VDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVL
Sbjct: 96  GYIGELEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVL 155

Query: 165 TTSAGIMDHEEARRKNVGGKVLGFFY 191
           TTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 156 TTSAGIMDHEEARRKNVGGKVLGFFY 181

[Close]

BLAST of CcUC09G183020 vs. ExPASy TrEMBL
Match: A0A287M3I7 (30S ribosomal protein S8, chloroplastic OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 132/146 (90.41%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 45  RSRQLSSSGLLSLSVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKH 104
           R R+   S   SL V MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKH
Sbjct: 20  RRRRHGQSSARSLEVRMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKH 79

Query: 105 GYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVL 164
           GYIGE E+VDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVL
Sbjct: 80  GYIGELEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVL 139

Query: 165 TTSAGIMDHEEARRKNVGGKVLGFFY 191
           TTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 140 TTSAGIMDHEEARRKNVGGKVLGFFY 165

[Close]

BLAST of CcUC09G183020 vs. ExPASy TrEMBL
Match: A0A4D6KTT0 (Small subunit ribosomal protein S15Ae OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g213 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.8e-67
Identity = 135/162 (83.33%), Postives = 145/162 (89.51%), Query Frame = 0


Query: 35  AVKEEALVPIRSRQLSSSG------LLSLSVTMVRVSVLNDALKSMYNAEKRGKRQVMIR 94
           +++ E   P+RS +  S+G      L SL  TMVRVSVLNDALKSMYNAEKRGKRQVMIR
Sbjct: 13  SLEVEKKFPLRSPERESTGAAWLRLLFSLLGTMVRVSVLNDALKSMYNAEKRGKRQVMIR 72

Query: 95  PSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEG 154
           PSSKVIIKFLLVMQKHGYIGEFE+VDDHR+GKIVVELNGRLNKCGVISPRFDVGVK+IE 
Sbjct: 73  PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKDIEP 132

Query: 155 WTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 191
           WTARLLPSRQFG+IVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 133 WTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 174

[Close]

BLAST of CcUC09G183020 vs. TAIR 10
Match: AT1G07770.1 (ribosomal protein S15A )

HSP 1 Score: 261.5 bits (667), Expect = 5.1e-70
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 61  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 120
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 121 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 180
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 181 VGGKVLGFFY 191
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of CcUC09G183020 vs. TAIR 10
Match: AT1G07770.2 (ribosomal protein S15A )

HSP 1 Score: 261.5 bits (667), Expect = 5.1e-70
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 61  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 120
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 121 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 180
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 181 VGGKVLGFFY 191
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of CcUC09G183020 vs. TAIR 10
Match: AT5G59850.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 261.5 bits (667), Expect = 5.1e-70
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 61  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 120
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 121 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 180
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 181 VGGKVLGFFY 191
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of CcUC09G183020 vs. TAIR 10
Match: AT3G46040.1 (ribosomal protein S15A D )

HSP 1 Score: 261.2 bits (666), Expect = 6.7e-70
Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 61  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 120
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 121 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 180
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 181 VGGKVLGFFY 191
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of CcUC09G183020 vs. TAIR 10
Match: AT2G39590.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 243.4 bits (620), Expect = 1.4e-64
Identity = 117/136 (86.03%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 55  LSLSVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVD 114
           + +   MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VD
Sbjct: 1   MCVEAIMVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVD 60

Query: 115 DHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHE 174
           DHRSGKIVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFG+IVLTTSAGIMDHE
Sbjct: 61  DHRSGKIVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHE 120

Query: 175 EARRKNVGGKVLGFFY 191
           EAR+KNVGGKVLGFFY
Sbjct: 121 EARKKNVGGKVLGFFY 136

The following BLAST results are available for this feature:

BLAST of CcUC09G183020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_037497885.1	3.4e-68	93.62	40S ribosomal protein S15a-1 isoform X1 [Jatropha curcas]	[more]
KAF8700839.1	2.2e-67	94.89	hypothetical protein HU200_034203 [Digitaria exilis]	[more]
KHN33076.1	2.9e-67	95.62	40S ribosomal protein S15a-1 [Glycine soja]	[more]
KAF5467254.1	2.9e-67	85.00	hypothetical protein F2P56_017099, partial [Juglans regia]	[more]
PQQ18479.1	2.9e-67	89.33	40S ribosomal protein S15a-1 [Prunus yedoensis var. nudiflora]	[more]

BLAST of CcUC09G183020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42798	7.2e-69	96.92	40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=...	[more]
Q9LX88	9.4e-69	96.92	40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=...	[more]
Q00332	2.1e-68	96.15	40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3	[more]
Q9AT34	1.8e-67	95.38	40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3	[more]
O80646	1.6e-63	90.00	40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=...	[more]

BLAST of CcUC09G183020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZP3	7.2e-80	87.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608140 PE=3 SV=1	[more]
A0A314ZGL2	1.4e-67	89.33	40S ribosomal protein S15a-1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Py...	[more]
A0A287M3J9	1.4e-67	90.41	30S ribosomal protein S8, chloroplastic OS=Hordeum vulgare subsp. vulgare OX=112...	[more]
A0A287M3I7	1.4e-67	90.41	30S ribosomal protein S8, chloroplastic OS=Hordeum vulgare subsp. vulgare OX=112...	[more]
A0A4D6KTT0	1.8e-67	83.33	Small subunit ribosomal protein S15Ae OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g...	[more]

BLAST of CcUC09G183020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07770.1	5.1e-70	96.92	ribosomal protein S15A	[more]
AT1G07770.2	5.1e-70	96.92	ribosomal protein S15A	[more]
AT5G59850.1	5.1e-70	96.92	Ribosomal protein S8 family protein	[more]
AT3G46040.1	6.7e-70	96.92	ribosomal protein S15A D	[more]
AT2G39590.1	1.4e-64	86.03	Ribosomal protein S8 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000630	Ribosomal protein S8	PFAM	PF00410	Ribosomal_S8	coord: 67..190 e-value: 3.9E-21 score: 75.3
IPR000630	Ribosomal protein S8	PANTHER	PTHR11758	40S RIBOSOMAL PROTEIN S15A	coord: 61..190
IPR000630	Ribosomal protein S8	PROSITE	PS00053	RIBOSOMAL_S8	coord: 160..177
IPR000630	Ribosomal protein S8	HAMAP	MF_01302_A	Ribosomal_S8_A	coord: 62..190 score: 32.288784
None	No IPR available	GENE3D	3.30.1490.10		coord: 130..190 e-value: 2.8E-36 score: 124.9
None	No IPR available	GENE3D	3.30.1370.30		coord: 61..129 e-value: 2.1E-35 score: 122.4
None	No IPR available	PANTHER	PTHR11758:SF39	OS02G0478600 PROTEIN	coord: 61..190
IPR035987	Ribosomal protein S8 superfamily	SUPERFAMILY	56047	Ribosomal protein S8	coord: 64..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G183020.1	CcUC09G183020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome