CcUC09G182920 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G182920
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionGlutamate dehydrogenase, NAD-specific
LocationCicolChr09: 34294768 .. 34297353 (+)
RNA-Seq ExpressionCcUC09G182920
SyntenyCcUC09G182920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGTCAAATGGTCATTCGAACAGTATTTTAGACCCGCTCATTCAAATTTTGTGCACACTTTCAAATGTTTCCATCTAGTTTTCTAGATCCAATGAGATTTTATACTTGGTACTTTCTTAGTTTAAAATCAATTTTAATATTCCTAGACTTTGAGATTAATTTTGAGTTATTATAAATTCAAACTAACGCATCCATTGAGTTATTATAAATTCAAACTAACACATCAATTAAAATACGGTAATAATTGCAATTAGAATCTTAAACTTTTAATCTTAAAAATTATACTCTAAAAATTATATAAATATTAAAATTATAAAATTAAACCTTTAAGTTTATATAAATTATAATATTTATATGTTTAATTTTAATTTCTATCATTTATAAGTTCAATTTGAAAATTCAATTTTAAAATATGGAATAAGTTTGGAGGTAAAAACCGATTTGCCCTTAAAAAAATCTAATTTATATTTCTAAATCATCCATATATTAATAGATTAGGTAAATCAGAAGCCCCCAACGTTATCTCAACTTTAGTGGAATTATGTCCCAATTGGCGGCCAAATGCAAAATTGAAGAATTGATTCACACGTGGAATTTTTTCCCCCTCCAAAAGCCCATTCCAAATTACTTCTCCTTTAGATTCCAATATAAACACAGACGGAACAGAGAAACCTCTAAGGATTATACGAATTGGCGACGGTTAATACAATCAAATAAAAACTCCCCTTCAATAAGTCGTGTGGCCAAAAAAATAAAAACCCAAAATATATGATTCCATCAGTAAAAGAAAAAGAAAAACATCATCGCCTCAAACCCCAAAATCACAGAATTACAATCAAAAGTAAATTTAGTCAACTTCCTCGATCTTAGGACCGGCGCCGCTACCACCGGACGGAGGAGGAACATCATCGTCATCCATACCGGCACCGCCCATGCCAGGCCCACCAGTACCCTGGTACATCTTAGCAACAATTGGGTTGCAAATACTCTCAAGCTCTTTCATTTTGTCTTCAAACTCATCAGCCTCAGCAAGTTGGTTGTTGTCAAGCCATTGGATTGCCTGTTCGATGGCATCCTCAATCTTCTTCTTGTCCGCCGGATCCAATTTTGAGCTGAACTTCTCATCCCTCACAGTGTTTCTCATGTTATAAGCATAGTTCTCCAACGAGTTCTTAGCTTCAACTTTCTTCTTGTGTTCTTCATCGTCGGCCTTGTATTTCTCTGCTTCTTGCACCATCTTCTCAATCTCTTCCTTCGACAACCGCCCTTTGTCGTTGGTGATTGTGATCTTGTTCTTCTGTCCCGTGGTTTTATCCTCGGCAGAAACATTCAGAATACCGTTGGCATCAATGTCGAAGCAGACTGTGATCTGAGGAACACCTCTAGGGGCTGGAGGGATTCCGGAAAGCTCAAATTTTCCAAGCAAGTTGTTGTCGCGAGTTCTTGCTCTCTCACCTTCATAGACTTGGATCAAAACACCAGGTTGATTGTCAGAGTATGTAGAGAAAACTTGTTCTTTCTTGGTGGGGATGGTGGTATTCCTTGGAATCAAGACAGTCATAACACCGCCAGCTGTTTCGAGTCCAAGTGAAAGAGGGGTAACATCCAAAAGCAGAAGATCTTGAACCTTCTCATTACCCTCACCGCTCAAGATGGCAGCTTGGACAGCAGCTCCATAGGCAACAGCTTCATCAGGGTTGATACTCTTGCAAAGCTCTTTGCCACTGAAGAAATCCTGCAACAATTGCTGCACCTTGGGAATTCTAGTGGAACCACCAACAAGAACAACATCATGGACACTGCTTTTGTCCATCTTAGCATCTCTCAAGCACTTCTCAACTGGTTCCATACACTTCCTGAAAAGATCCATATTGAGTTCCTCAAATCTAGCACGGGTAATGGTTGAATAGAAGTCAATTCCTTCGTAAAGAGAGTCAATCTCAATTGTAGTTTGAGCTGTAGAAGAAAGTGTCCTCTTAGCCCTTTCACAAGCAGTTCTCAACCGCCTAAGAGCCCTGGGATTCCCACTAATGTCTTTCTTATTCTTTCTCTTGAATTCTTGCACGAAGTGGTTAACCAATCTGTTATCAAAATCTTCACCACCCAGATGAGTGTCTCCTGCAGTTGCTTTCACCTCAAAGATACCTTCTTCGATTGTGAGCAATGAAACATCAAAGGTACCACCGCCCAGATCAAAAATTAGAACATTCTTTTCACCGGCGCTGCTGGACTTCTTGTCGAGACCATAAGCAATGGCGGCAGCAGTTGGTTCATTGATGATACGCATTACATTTAGACCTGAAATGACCCCGGCGTCCTTGGTGGCCTGTCTCTGTGAATCGTTGAAGTAGGCAGGAACAGTGACGACGGCGTTCTTCACTGTTGTTCCCAGATACGCCTCGGCAATCTCCTTCATCTTTATAAGCACCATAGAAGAGATTTCTTCAGCCGAAAACTGCTTCTCTTCACCCTTGTAGTTTACAACAATCATGGGCTTGTCACTAGGGCCGGCAATAACTTTAAATGGCCAGAGCTTGATATCACTCTGGACCGATGGATCGCTAAATCTTCGGCCAATTAA

mRNA sequence

ATGACAGGACCGGCGCCGCTACCACCGGACGGAGGAGGAACATCATCGTCATCCATACCGGCACCGCCCATGCCAGGCCCACCAGTACCCTGGTACATCTTAGCAACAATTGGGTTGCAAATACTCTCAAGCTCTTTCATTTTGTCTTCAAACTCATCAGCCTCAGCAAGTTGGTTGTTGTCAAGCCATTGGATTGCCTGTTCGATGGCATCCTCAATCTTCTTCTTGTCCGCCGGATCCAATTTTGAGCTGAACTTCTCATCCCTCACAGTGTTTCTCATCATAGTTCTCCAACGAGTTCTTAGCTTCAACTTTCTTCTTGTGTTCTTCATCGTCGGCCTTGTATTTCTCTGCTTCTTGCACCATCTTCTCAATCTCTTCCTTCGACAACCGCCCTTTGTCGTTGGTGATTGTGATCTTGTTCTTCTGTCCCGTGGTTTTATCCTCGGCAGAAACATTCAGAATACCGTTGGCATCAATGTCGAAGCAGACTGTGATCTGAGGAACACCTCTAGGGGCTGGAGGGATTCCGGAAAGCTCAAATTTTCCAAGCAAGTTGTTGTCGCGAGTTCTTGCTCTCTCACCTTCATAGACTTGGATCAAAACACCAGGTTGATTGTCAGAGTATGTAGAGAAAACTTGTTCTTTCTTGGTGGGGATGGTGGTATTCCTTGGAATCAAGACAGTCATAACACCGCCAGCTGTTTCGAGTCCAAGGGTAACATCCAAAAGCAGAAGATCTTGAACCTTCTCATTACCCTCACCGCTCAAGATGGCAGCTTGGACAGCAGCTCCATAGGCAACAGCTTCATCAGGGTTGATACTCTTGCAAAGCTCTTTGCCACTGAAGAAATCCTGCAACAATTGCTGCACCTTGGGAATTCTAGTGGAACCACCAACAAGAACAACATCATGGACACTGCTTTTGTCCATCTTAGCATCTCTCAAGCACTTCTCAACTGGTTCCATACACTTCCTGAAAAGATCCATATTGAGTTCCTCAAATCTAGCACGGGCAGGAACAGTGACGACGGCGTTCTTCACTGTTGTTCCCAGATACGCCTCGGCAATCTCCTTCATCTTTATAAGCACCATAGAAGAGATTTCTTCAGCCGAAAACTGCTTCTCTTCACCCTTGTAGTTTACAACAATCATGGGCTTGTCACTAGGGCCGGCAATAACTTTAAATGGCCAGAGCTTGATATCACTCTGGACCGATGGATCGCTAAATCTTCGGCCAATTAA

Coding sequence (CDS)

ATGACAGGACCGGCGCCGCTACCACCGGACGGAGGAGGAACATCATCGTCATCCATACCGGCACCGCCCATGCCAGGCCCACCAGTACCCTGGTACATCTTAGCAACAATTGGGTTGCAAATACTCTCAAGCTCTTTCATTTTGTCTTCAAACTCATCAGCCTCAGCAAGTTGGTTGTTGTCAAGCCATTGGATTGCCTGTTCGATGGCATCCTCAATCTTCTTCTTGTCCGCCGGATCCAATTTTGAGCTGAACTTCTCATCCCTCACAGTGTTTCTCATCATAGTTCTCCAACGAGTTCTTAGCTTCAACTTTCTTCTTGTGTTCTTCATCGTCGGCCTTGTATTTCTCTGCTTCTTGCACCATCTTCTCAATCTCTTCCTTCGACAACCGCCCTTTGTCGTTGGTGATTGTGATCTTGTTCTTCTGTCCCGTGGTTTTATCCTCGGCAGAAACATTCAGAATACCGTTGGCATCAATGTCGAAGCAGACTGTGATCTGAGGAACACCTCTAGGGGCTGGAGGGATTCCGGAAAGCTCAAATTTTCCAAGCAAGTTGTTGTCGCGAGTTCTTGCTCTCTCACCTTCATAGACTTGGATCAAAACACCAGGTTGATTGTCAGAGTATGTAGAGAAAACTTGTTCTTTCTTGGTGGGGATGGTGGTATTCCTTGGAATCAAGACAGTCATAACACCGCCAGCTGTTTCGAGTCCAAGGGTAACATCCAAAAGCAGAAGATCTTGAACCTTCTCATTACCCTCACCGCTCAAGATGGCAGCTTGGACAGCAGCTCCATAGGCAACAGCTTCATCAGGGTTGATACTCTTGCAAAGCTCTTTGCCACTGAAGAAATCCTGCAACAATTGCTGCACCTTGGGAATTCTAGTGGAACCACCAACAAGAACAACATCATGGACACTGCTTTTGTCCATCTTAGCATCTCTCAAGCACTTCTCAACTGGTTCCATACACTTCCTGAAAAGATCCATATTGAGTTCCTCAAATCTAGCACGGGCAGGAACAGTGACGACGGCGTTCTTCACTGTTGTTCCCAGATACGCCTCGGCAATCTCCTTCATCTTTATAAGCACCATAGAAGAGATTTCTTCAGCCGAAAACTGCTTCTCTTCACCCTTGTAGTTTACAACAATCATGGGCTTGTCACTAGGGCCGGCAATAACTTTAAATGGCCAGAGCTTGATATCACTCTGGACCGATGGATCGCTAAATCTTCGGCCAATTAA

Protein sequence

MTGPAPLPPDGGGTSSSSIPAPPMPGPPVPWYILATIGLQILSSSFILSSNSSASASWLLSSHWIACSMASSIFFLSAGSNFELNFSSLTVFLIIVLQRVLSFNFLLVFFIVGLVFLCFLHHLLNLFLRQPPFVVGDCDLVLLSRGFILGRNIQNTVGINVEADCDLRNTSRGWRDSGKLKFSKQVVVASSCSLTFIDLDQNTRLIVRVCRENLFFLGGDGGIPWNQDSHNTASCFESKGNIQKQKILNLLITLTAQDGSLDSSSIGNSFIRVDTLAKLFATEEILQQLLHLGNSSGTTNKNNIMDTAFVHLSISQALLNWFHTLPEKIHIEFLKSSTGRNSDDGVLHCCSQIRLGNLLHLYKHHRRDFFSRKLLLFTLVVYNNHGLVTRAGNNFKWPELDITLDRWIAKSSAN
Homology
BLAST of CcUC09G182920 vs. NCBI nr
Match: PON56616.1 (LOW QUALITY PROTEIN: Glutamate dehydrogenase, NAD-specific [Parasponia andersonii])

HSP 1 Score: 283.9 bits (725), Expect = 2.3e-72
Identity = 155/250 (62.00%), Postives = 190/250 (76.00%), Query Frame = 0

Query: 93  LIIVLQRVLSFNFLLVFFIVGLVFLCFLHHLLNLFLRQPPFVVGDCDLVLLSRGFILGRN 152
           +++VLQ +L  N LLV  I+ LVFL  L+HLLN  L Q   VVGD DLVLLS G +L RN
Sbjct: 98  VVVVLQGILGINLLLVLLILCLVFLRLLNHLLNFILGQSSLVVGDGDLVLLSCGLVLSRN 157

Query: 153 IQNTVGINVEADCDLRNTSRGWRDSGKLKFSKQVVVASSCSLTFIDLDQNTRLIVRVCRE 212
           I +T+GINV+AD DLRNT   WR++ KLK S+QVVV  S SLT I+LDQ+TRL+VRVC E
Sbjct: 158 INDTIGINVKADIDLRNTPGSWRNARKLKLSEQVVVPGSGSLTLINLDQHTRLVVRVCGE 217

Query: 213 NLFFLGGDGGIPWNQDSHNTASCFESKG---NIQKQKILNLLITLTAQDGSLDSSSIGNS 272
           +L  LGG+G +P NQ SHNT+S  ++K    NIQKQ+ILNLL++   Q+ SLDS +I NS
Sbjct: 218 HLLLLGGNGCVPGNQYSHNTSSGLQTKRQRCNIQKQQILNLLVSFPTQNSSLDSGTISNS 277

Query: 273 FIRVDTLAKLFATEEILQQLLHLGNSSGTTNKNNIMDTAFVHLSISQALLNWFHTLPEKI 332
            IRV+ LAKL + EEILQQLL+L NSSGTTNK+ IM+ A VHLSISQ LL+ FHT PE+I
Sbjct: 278 LIRVNALAKLLSIEEILQQLLNLWNSSGTTNKHYIMNGALVHLSISQTLLDGFHTFPEEI 337

Query: 333 HIEFLKSSTG 340
           H+EFLKS TG
Sbjct: 338 HVEFLKSGTG 347

BLAST of CcUC09G182920 vs. NCBI nr
Match: PON88701.1 (Glutamate dehydrogenase, NAD-specific [Trema orientale])

HSP 1 Score: 282.0 bits (720), Expect = 8.6e-72
Identity = 156/261 (59.77%), Postives = 194/261 (74.33%), Query Frame = 0

Query: 84  LNFSSLTVFLIIVLQRVLSFNFLLVFFIVGLVFLCFLHHLLNLFLRQPPFVVGDCDLVLL 143
           L   S+   + +VLQ +L  N LLV  I+ LVFL  L+HLLN  L Q   VVGD DLVLL
Sbjct: 90  LVLDSVPHVVCVVLQGILGINLLLVLLILCLVFLRLLNHLLNFILGQSSLVVGDGDLVLL 149

Query: 144 SRGFILGRNIQNTVGINVEADCDLRNTSRGWRDSGKLKFSKQVVVASSCSLTFIDLDQNT 203
           S G +L RNI++T+GINV+AD DLRNT   WR++ KLK S+QVVV  S SLT I+LDQ+T
Sbjct: 150 SCGLVLSRNIKDTIGINVKADIDLRNTPGSWRNARKLKLSEQVVVPGSGSLTLINLDQHT 209

Query: 204 RLIVRVCRENLFFLGGDGGIPWNQDSHNTASCFESKG---NIQKQKILNLLITLTAQDGS 263
           RL+VRVC E+L  LGG+G +P NQ SHNT+S  ++K    NIQKQ+ILNLL++   Q+ S
Sbjct: 210 RLVVRVCGEHLLLLGGNGCVPGNQYSHNTSSGLQTKRQRCNIQKQQILNLLVSFPTQNSS 269

Query: 264 LDSSSIGNSFIRVDTLAKLFATEEILQQLLHLGNSSGTTNKNNIMDTAFVHLSISQALLN 323
           LDS +I NS IRV+ LAKL + EE+LQQLL+LGNSSGTTNK+ IM+ A VHLSISQ LL+
Sbjct: 270 LDSGTISNSLIRVNALAKLLSIEEVLQQLLNLGNSSGTTNKHYIMNGALVHLSISQTLLD 329

Query: 324 WFHTLPEKIHIEFLKSSTGRN 342
             HT PE+IH+EFLKS TG +
Sbjct: 330 GLHTFPEEIHVEFLKSGTGNS 350

BLAST of CcUC09G182920 vs. NCBI nr
Match: OAY83273.1 (NAD-specific glutamate dehydrogenase [Ananas comosus])

HSP 1 Score: 224.2 bits (570), Expect = 2.1e-54
Identity = 112/255 (43.92%), Postives = 177/255 (69.41%), Query Frame = 0

Query: 95  IVLQRVLSFNFLLVFFIVGLVFLCFLHHLLNLFLRQPPFVVGDCDLVLLSRGFILGRNIQ 154
           +VLQRVL  + LLV  +V LV L  L H L+L   +PP VVGD DLVL++RG +LG +++
Sbjct: 163 VVLQRVLGVDLLLVLLVVLLVLLRLLDHPLDLLFAEPPLVVGDGDLVLVARGLVLGGDVE 222

Query: 155 NTVGINVEADCDLRNTSRGWRDSGKLKFSKQVVVASSCSLTFIDLDQNTRLIVRVCRENL 214
           + VG++VEAD DLR+   G  D+G+L+ +++VVV     L  +DLD++  L+V V  E+L
Sbjct: 223 DAVGVDVEADVDLRHAPGGRGDAGELELAEEVVVLGPGPLALVDLDEDAGLVVGVGGEDL 282

Query: 215 FFLGGDGGIPWNQDSHNTASCFESKG---NIQKQKILNLLITLTAQDGSLDSSSIGNSFI 274
             LGGDGG+P ++D H+ A   E++G   +++++++L+LL+ L A+DG LDS  +G+  +
Sbjct: 283 LLLGGDGGVPGDEDGHDAAGGLEAEGERRDVEEEQVLHLLVALAAEDGGLDSGPVGDGLV 342

Query: 275 RVDTLAKLFATEEILQQLLHLGNSSGTTNKNNIMDTAFVHLSISQALLNWFHTLPEKIHI 334
            VD LA+L A EE+LQ+LLHLG++ G  ++++++D A VHL ++QALL+  H   E++H+
Sbjct: 343 GVDALAELLAVEEVLQELLHLGDAGGAADEDDVVDVALVHLGVAQALLDGLHAAAEEVHV 402

Query: 335 EFLKSSTGRNSDDGV 347
           + L++  G   D GV
Sbjct: 403 QLLEAGAG---DGGV 414

BLAST of CcUC09G182920 vs. NCBI nr
Match: THU52808.1 (hypothetical protein C4D60_Mb10t07840 [Musa balbisiana])

HSP 1 Score: 222.6 bits (566), Expect = 6.2e-54
Identity = 124/265 (46.79%), Postives = 182/265 (68.68%), Query Frame = 0

Query: 91  VFLIIVLQRVLSFNFLL---VFFIVGLVF---LCFLHHLLNLFLRQPPFVVGDCDLVLLS 150
           ++L++V +R L  + ++   V  +VG+V    L F   L+ L LR PP VVGD DLVL+ 
Sbjct: 86  LYLLLVTRRKLGADLVVPDGVPHVVGVVLQGVLRFHLFLVLLVLRLPPLVVGDGDLVLVP 145

Query: 151 RGFILGRNIQNTVGINVEADCDLRNTSRGWRDSGKLKFSKQVVVASSCSLTFIDLDQNTR 210
            G +L R++Q+ +G+++EAD DLR+ + G RD+G+L+F++QVVV     L  +DLDQ++R
Sbjct: 146 GGLVLRRHVQDPIGVDIEADVDLRHAAGGGRDAGELEFAEQVVVPGPRPLALVDLDQDSR 205

Query: 211 LIVRVCRENLFFLGGDGGIPWNQDSHNTASCFESKG---NIQKQKILNLLITLTAQDGSL 270
           L+V V RE+L FLGGDG +P NQD H+ AS  + +G   ++Q+Q+IL+LL+ L+AQD  L
Sbjct: 206 LVVGVGREDLLFLGGDGRVPRNQDGHHAASGLQPEGERSDVQQQQILHLLVALSAQDRGL 265

Query: 271 DSSSIGNSFIRVDTLAKLFATEEILQQLLHLGNSSGTTNKNNIMDTAFVHLSISQALLNW 330
              + G+S + VD LAKL   EE+LQQLLHLGN   T +++++MD A VHL + QALL+W
Sbjct: 266 HRRTAGDSLVGVDALAKLLPIEEVLQQLLHLGNPGRTPDEDDVMDAALVHLGVPQALLHW 325

Query: 331 FHTLPEKIHIEFLKSSTGRNSDDGV 347
            H LPE++H+E L+    R  D GV
Sbjct: 326 LHALPEQVHVELLEP---RARDAGV 347

BLAST of CcUC09G182920 vs. NCBI nr
Match: KAF3791349.1 (NAD-specific glutamate dehydrogenase [Nymphaea thermarum])

HSP 1 Score: 214.5 bits (545), Expect = 1.7e-51
Identity = 111/243 (45.68%), Postives = 168/243 (69.14%), Query Frame = 0

Query: 96  VLQRVLSFNFLLVFFIVGLVFLCFLHHLLNLFLRQPPFVVGDCDLVLLSRGFILGRNIQN 155
           +L  +L    LL   ++ LV L FLHHL ++ L QP  VV D DLVL    F+ G +IQ+
Sbjct: 133 LLLGILCLYLLLHLLVLRLVPLRFLHHLFDVLLAQPSLVVCDGDLVLHPSRFVFGGDIQD 192

Query: 156 TVGINVEADCDLRNTSRGWRDSGKLKFSKQVVVASSCSLTFIDLDQNTRLIVRVCRENLF 215
           +VG+NVEA+ DL +  R  RD+G+L+F +Q+VV   C L F+ L+Q++RL+V V  E+LF
Sbjct: 193 SVGVNVEANVDLGDAPRSRRDTGELEFPEQIVVLGPCPLPFVHLNQDSRLVVGVGGEDLF 252

Query: 216 FLGGDGGIPWNQDSHNTASCFESKG---NIQKQKILNLLITLTAQDGSLDSSSIGNSFIR 275
            LGGDGG+ W++  H++A   E++    +++++++L+LL+ LTAQDG LD  ++G+ FI 
Sbjct: 253 LLGGDGGVAWDEHCHDSAGSLETQAERRDVEEEEVLHLLVALTAQDGRLDGGAVGDGFIG 312

Query: 276 VDTLAKLFATEEILQQLLHLGNSSGTTNKNNIMDTAFVHLSISQALLNWFHTLPEKIHIE 335
           +D LA+L   EEILQQLL+LG  SG+ +K+NIM+   V L ++QAL +  H LPE++HI+
Sbjct: 313 IDALAELLPIEEILQQLLNLGYPSGSPDKHNIMNRGLVDLGVTQALFDGLHALPEQVHIK 372

BLAST of CcUC09G182920 vs. ExPASy Swiss-Prot
Match: P41755 (NAD-specific glutamate dehydrogenase OS=Achlya klebsiana OX=4767 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.0e-44
Identity = 109/256 (42.58%), Postives = 159/256 (62.11%), Query Frame = 0

Query: 95  IVLQRVLSFNFLLVFFIVGLVFLCFLHHLLNLFLRQPPFVVGDCDLVLLSRGFILGRNIQ 154
           +V + VL FN  +V FI  LV   FLHH  N+ L +   VVG+ +LV  +     GR++Q
Sbjct: 496 VVFKTVLGFNADVVGFIFRLVLFSFLHHAFNIILGEATLVVGNGNLVFFTSRLFDGRHVQ 555

Query: 155 NTVGINVEADCDLRNTSRGWRDSGKLKFSKQVVVASSCSLTFIDLDQNTRLIVRVCRENL 214
           +TVGINVE D +L NT+R WR++ + +  +QVVV    +LTF  L+Q+TRL+V V  E+L
Sbjct: 556 DTVGINVEGDINLWNTTRHWRNTIEGELPEQVVVTGHRTLTFKHLNQHTRLVVSVGGESL 615

Query: 215 FFLGGDGGIPWNQDSHNTASCFESK---GNIQKQKILNLL-ITLTAQDGSLDSSSIGNSF 274
             LG    +  ++ SH+T S F++K    +I+KQ++L L    +TAQ+GSLD  +  NSF
Sbjct: 616 RLLGWHSSVTLDEGSHDTTSSFQTKRERSDIKKQQVLELFRRVVTAQNGSLDCGTESNSF 675

Query: 275 IRVDTLAKLFATEEILQQLLHLGNSSGTTNKNNIMDTAFVHLSISQALLNWFHTLPEKIH 334
           IRVD LA   A EE+ +QLL L ++ GTT+K++ MD A   L +++ L N FH+L E + 
Sbjct: 676 IRVDRLAWFLAVEEVRKQLLDLWDTGGTTDKDDFMDLALGELRVTEDLFNRFHSLAEVVT 735

Query: 335 IEFLKSSTGRNSDDGV 347
               ++ TG   D GV
Sbjct: 736 AHVFETGTG---DGGV 748

BLAST of CcUC09G182920 vs. ExPASy TrEMBL
Match: A0A2P5C6B9 (Glutamate dehydrogenase, NAD-specific OS=Parasponia andersonii OX=3476 GN=PanWU01x14_180290 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-72
Identity = 155/250 (62.00%), Postives = 190/250 (76.00%), Query Frame = 0

Query: 93  LIIVLQRVLSFNFLLVFFIVGLVFLCFLHHLLNLFLRQPPFVVGDCDLVLLSRGFILGRN 152
           +++VLQ +L  N LLV  I+ LVFL  L+HLLN  L Q   VVGD DLVLLS G +L RN
Sbjct: 98  VVVVLQGILGINLLLVLLILCLVFLRLLNHLLNFILGQSSLVVGDGDLVLLSCGLVLSRN 157

Query: 153 IQNTVGINVEADCDLRNTSRGWRDSGKLKFSKQVVVASSCSLTFIDLDQNTRLIVRVCRE 212
           I +T+GINV+AD DLRNT   WR++ KLK S+QVVV  S SLT I+LDQ+TRL+VRVC E
Sbjct: 158 INDTIGINVKADIDLRNTPGSWRNARKLKLSEQVVVPGSGSLTLINLDQHTRLVVRVCGE 217

Query: 213 NLFFLGGDGGIPWNQDSHNTASCFESKG---NIQKQKILNLLITLTAQDGSLDSSSIGNS 272
           +L  LGG+G +P NQ SHNT+S  ++K    NIQKQ+ILNLL++   Q+ SLDS +I NS
Sbjct: 218 HLLLLGGNGCVPGNQYSHNTSSGLQTKRQRCNIQKQQILNLLVSFPTQNSSLDSGTISNS 277

Query: 273 FIRVDTLAKLFATEEILQQLLHLGNSSGTTNKNNIMDTAFVHLSISQALLNWFHTLPEKI 332
            IRV+ LAKL + EEILQQLL+L NSSGTTNK+ IM+ A VHLSISQ LL+ FHT PE+I
Sbjct: 278 LIRVNALAKLLSIEEILQQLLNLWNSSGTTNKHYIMNGALVHLSISQTLLDGFHTFPEEI 337

Query: 333 HIEFLKSSTG 340
           H+EFLKS TG
Sbjct: 338 HVEFLKSGTG 347

BLAST of CcUC09G182920 vs. ExPASy TrEMBL
Match: A0A2P5ET30 (Glutamate dehydrogenase, NAD-specific OS=Trema orientale OX=63057 GN=TorRG33x02_154070 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.1e-72
Identity = 156/261 (59.77%), Postives = 194/261 (74.33%), Query Frame = 0

Query: 84  LNFSSLTVFLIIVLQRVLSFNFLLVFFIVGLVFLCFLHHLLNLFLRQPPFVVGDCDLVLL 143
           L   S+   + +VLQ +L  N LLV  I+ LVFL  L+HLLN  L Q   VVGD DLVLL
Sbjct: 90  LVLDSVPHVVCVVLQGILGINLLLVLLILCLVFLRLLNHLLNFILGQSSLVVGDGDLVLL 149

Query: 144 SRGFILGRNIQNTVGINVEADCDLRNTSRGWRDSGKLKFSKQVVVASSCSLTFIDLDQNT 203
           S G +L RNI++T+GINV+AD DLRNT   WR++ KLK S+QVVV  S SLT I+LDQ+T
Sbjct: 150 SCGLVLSRNIKDTIGINVKADIDLRNTPGSWRNARKLKLSEQVVVPGSGSLTLINLDQHT 209

Query: 204 RLIVRVCRENLFFLGGDGGIPWNQDSHNTASCFESKG---NIQKQKILNLLITLTAQDGS 263
           RL+VRVC E+L  LGG+G +P NQ SHNT+S  ++K    NIQKQ+ILNLL++   Q+ S
Sbjct: 210 RLVVRVCGEHLLLLGGNGCVPGNQYSHNTSSGLQTKRQRCNIQKQQILNLLVSFPTQNSS 269

Query: 264 LDSSSIGNSFIRVDTLAKLFATEEILQQLLHLGNSSGTTNKNNIMDTAFVHLSISQALLN 323
           LDS +I NS IRV+ LAKL + EE+LQQLL+LGNSSGTTNK+ IM+ A VHLSISQ LL+
Sbjct: 270 LDSGTISNSLIRVNALAKLLSIEEVLQQLLNLGNSSGTTNKHYIMNGALVHLSISQTLLD 329

Query: 324 WFHTLPEKIHIEFLKSSTGRN 342
             HT PE+IH+EFLKS TG +
Sbjct: 330 GLHTFPEEIHVEFLKSGTGNS 350

BLAST of CcUC09G182920 vs. ExPASy TrEMBL
Match: A0A199W237 (NAD-specific glutamate dehydrogenase OS=Ananas comosus OX=4615 GN=ACMD2_15694 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-54
Identity = 112/255 (43.92%), Postives = 177/255 (69.41%), Query Frame = 0

Query: 95  IVLQRVLSFNFLLVFFIVGLVFLCFLHHLLNLFLRQPPFVVGDCDLVLLSRGFILGRNIQ 154
           +VLQRVL  + LLV  +V LV L  L H L+L   +PP VVGD DLVL++RG +LG +++
Sbjct: 163 VVLQRVLGVDLLLVLLVVLLVLLRLLDHPLDLLFAEPPLVVGDGDLVLVARGLVLGGDVE 222

Query: 155 NTVGINVEADCDLRNTSRGWRDSGKLKFSKQVVVASSCSLTFIDLDQNTRLIVRVCRENL 214
           + VG++VEAD DLR+   G  D+G+L+ +++VVV     L  +DLD++  L+V V  E+L
Sbjct: 223 DAVGVDVEADVDLRHAPGGRGDAGELELAEEVVVLGPGPLALVDLDEDAGLVVGVGGEDL 282

Query: 215 FFLGGDGGIPWNQDSHNTASCFESKG---NIQKQKILNLLITLTAQDGSLDSSSIGNSFI 274
             LGGDGG+P ++D H+ A   E++G   +++++++L+LL+ L A+DG LDS  +G+  +
Sbjct: 283 LLLGGDGGVPGDEDGHDAAGGLEAEGERRDVEEEQVLHLLVALAAEDGGLDSGPVGDGLV 342

Query: 275 RVDTLAKLFATEEILQQLLHLGNSSGTTNKNNIMDTAFVHLSISQALLNWFHTLPEKIHI 334
            VD LA+L A EE+LQ+LLHLG++ G  ++++++D A VHL ++QALL+  H   E++H+
Sbjct: 343 GVDALAELLAVEEVLQELLHLGDAGGAADEDDVVDVALVHLGVAQALLDGLHAAAEEVHV 402

Query: 335 EFLKSSTGRNSDDGV 347
           + L++  G   D GV
Sbjct: 403 QLLEAGAG---DGGV 414

BLAST of CcUC09G182920 vs. ExPASy TrEMBL
Match: A0A4S8IVE8 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb10t07840 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.0e-54
Identity = 124/265 (46.79%), Postives = 182/265 (68.68%), Query Frame = 0

Query: 91  VFLIIVLQRVLSFNFLL---VFFIVGLVF---LCFLHHLLNLFLRQPPFVVGDCDLVLLS 150
           ++L++V +R L  + ++   V  +VG+V    L F   L+ L LR PP VVGD DLVL+ 
Sbjct: 86  LYLLLVTRRKLGADLVVPDGVPHVVGVVLQGVLRFHLFLVLLVLRLPPLVVGDGDLVLVP 145

Query: 151 RGFILGRNIQNTVGINVEADCDLRNTSRGWRDSGKLKFSKQVVVASSCSLTFIDLDQNTR 210
            G +L R++Q+ +G+++EAD DLR+ + G RD+G+L+F++QVVV     L  +DLDQ++R
Sbjct: 146 GGLVLRRHVQDPIGVDIEADVDLRHAAGGGRDAGELEFAEQVVVPGPRPLALVDLDQDSR 205

Query: 211 LIVRVCRENLFFLGGDGGIPWNQDSHNTASCFESKG---NIQKQKILNLLITLTAQDGSL 270
           L+V V RE+L FLGGDG +P NQD H+ AS  + +G   ++Q+Q+IL+LL+ L+AQD  L
Sbjct: 206 LVVGVGREDLLFLGGDGRVPRNQDGHHAASGLQPEGERSDVQQQQILHLLVALSAQDRGL 265

Query: 271 DSSSIGNSFIRVDTLAKLFATEEILQQLLHLGNSSGTTNKNNIMDTAFVHLSISQALLNW 330
              + G+S + VD LAKL   EE+LQQLLHLGN   T +++++MD A VHL + QALL+W
Sbjct: 266 HRRTAGDSLVGVDALAKLLPIEEVLQQLLHLGNPGRTPDEDDVMDAALVHLGVPQALLHW 325

Query: 331 FHTLPEKIHIEFLKSSTGRNSDDGV 347
            H LPE++H+E L+    R  D GV
Sbjct: 326 LHALPEQVHVELLEP---RARDAGV 347

BLAST of CcUC09G182920 vs. ExPASy TrEMBL
Match: A0A287G6D9 (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.3e-53
Identity = 115/255 (45.10%), Postives = 176/255 (69.02%), Query Frame = 0

Query: 95  IVLQRVLSFNFLLVFFIVGLVFLCFLHHLLNLFLRQPPFVVGDCDLVLLSRGFILGRNIQ 154
           +VLQRVL  + LLV  ++ LV L  LHHLL+L L QPP +VGD DLVLL R  +L R++Q
Sbjct: 137 VVLQRVLGVHLLLVLLVLRLVPLRLLHHLLDLLLAQPPLIVGDGDLVLLPRRLVLRRHVQ 196

Query: 155 NTVGINVEADCDLRNTSRGWRDSGKLKFSKQVVVASSCSLTFIDLDQNTRLIVRVCRENL 214
           + VG++VEA  DL + +    D+G+L+ +++VVV    +L  + LDQ+ RL+VRV  E+L
Sbjct: 197 DAVGVDVEAHRDLGHAAGRRGDAGQLELAQEVVVLGPGALALVHLDQDARLVVRVGGEDL 256

Query: 215 FFLGGDGGIPWNQDSHNTASCFESKG---NIQKQKILNLLITLTAQDGSLDSSSIGNSFI 274
             LGGDGG+P ++  H+ A   +++G   N+Q+Q++L+LL+ L AQDG LD  ++ +  +
Sbjct: 257 LLLGGDGGVPRDERRHDAAGRLQAQGQRRNVQQQQVLHLLVALAAQDGGLDGGAVRHGLV 316

Query: 275 RVDTLAKLFATEEILQQLLHLGNSSGTTNKNNIMDTAFVHLSISQALLNWFHTLPEKIHI 334
            VD LA+L A EE+L+QLLHLG + G  ++++++  A VHL +++ALL+  H L E++H+
Sbjct: 317 GVDALAQLLAVEEVLEQLLHLGYTGGAADQHHVVHGALVHLGVAKALLHRLHALAEEVHV 376

Query: 335 EFLKSSTGRNSDDGV 347
           E L++S G   D GV
Sbjct: 377 ELLEASPG---DGGV 388

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON56616.12.3e-7262.00LOW QUALITY PROTEIN: Glutamate dehydrogenase, NAD-specific [Parasponia andersoni... [more]
PON88701.18.6e-7259.77Glutamate dehydrogenase, NAD-specific [Trema orientale][more]
OAY83273.12.1e-5443.92NAD-specific glutamate dehydrogenase [Ananas comosus][more]
THU52808.16.2e-5446.79hypothetical protein C4D60_Mb10t07840 [Musa balbisiana][more]
KAF3791349.11.7e-5145.68NAD-specific glutamate dehydrogenase [Nymphaea thermarum][more]
Match NameE-valueIdentityDescription
P417556.0e-4442.58NAD-specific glutamate dehydrogenase OS=Achlya klebsiana OX=4767 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A2P5C6B91.1e-7262.00Glutamate dehydrogenase, NAD-specific OS=Parasponia andersonii OX=3476 GN=PanWU0... [more]
A0A2P5ET304.1e-7259.77Glutamate dehydrogenase, NAD-specific OS=Trema orientale OX=63057 GN=TorRG33x02_... [more]
A0A199W2371.0e-5443.92NAD-specific glutamate dehydrogenase OS=Ananas comosus OX=4615 GN=ACMD2_15694 PE... [more]
A0A4S8IVE83.0e-5446.79Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb10t07840 PE=4 SV=... [more]
A0A287G6D93.3e-5345.10Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019651Glutamate dehydrogenase, NAD-specificPFAMPF10712NAD-GHcoord: 339..414
e-value: 6.3E-8
score: 31.6
coord: 107..339
e-value: 4.1E-52
score: 177.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G182920.1CcUC09G182920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane