CcUC09G182590 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G182590
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	transcription initiation factor TFIID subunit 7
Location	CicolChr09: 34035444 .. 34038525 (+)
RNA-Seq Expression	CcUC09G182590
Synteny	CcUC09G182590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAATAAGATGGAATTTTCTGGATCTGTGTCTCGCGACTCCCTCCCCCGCGCCATCGATATCCCTCCATCTCTATATCTTGCTCAACTATCCGTTGATTCGTGTCTCGCCGGCGGAAATCATCAAAAGAGGGGAACATTTCTAATCTCTCTGGTACGAGGGCTCTTTCAAGCTCAAAGGAAAGGACAGAAAACTTCACACCAATCACAACCTTCGAGCATTCAAGGTAATTGGGATAAAAATTGAACGAATTGAACGAATTTTTTGTTTAGAGACCCATTTGTGTCAAGATTTGATAACCCAAATGGCACTATTTTTAGAACCCCATTTCTAAGTTCTCAGCTTTTTTGAAGTCTAGATCCGAAAATTGAATCCGTGAGGCTAAGGTGTAGCCTTTTTATGAGACCAGAAAGTAGCGGAGCTCGGAGGACGGAGGTATTTTTATTCTCATCGCATTGTGTAAGGAGTTCTTTTGCTAGATAATTGATGCGTTTTCTTCGTTTCCCCCTACTTTCTCTATTGCGGATGGATTTTATTAAATCCGAGTAATTTTTCGTCAGATAATGTTTCTTCCCCTTTTGTTTGATTAGGTCAAATTTTCTTTCACTATCCTCTTACTGTCCAAATTTTGATTGTGGGCTGTTGCTAATTGGATGTTTATTGGTTGGACTATTTTCCCTGCTGTTTTCCCTGCTGTTTTCCCTTGGGAGTGATAACTGATATTGTATTATTTGTGTTTTTTTCCCTCTTTCTATGTTTATGTGTGCTGAAATTTTAGGATCATATTCGTCTACAACCTTATAGTCAATGAAATTAGTTTCCTAAAGAAGTCTTTAAAGGACAGGCATAATTTTTTTTTTCTTTGTCAAATGATAATTTTGTTTTTCAATCTTTGAAAGAATGAAAATGCTTTTATGGAAATTCTTGCGAGCCTGGTTCCACTTATGATGGTTGAGCTTCTCTGTGCTGCAGTTTTGTTGATTTAGACTCTGAAGTTATGGAGGAGCAGTTTGTACTGAGGGTTCCACCTTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGAAGATGCTTCATTGGATTTGTCTTTCTCTGGTAAAAGAACTTATACAGTCATCTTCTGATTCATTCTGTGCGTTCTGTGCTTTTTCCATTACATTTGCTGTGATGTTTGATGAACGGAAGAAGTAGAACTTTTAGATTTTTGGACAGTTTAGCTTTATAGCCTCTTAAAGAAACAAAAGTGACTTCTGGTACAAACCTTTTTTTTTACTCTAAACTTTTTTCTTTTATTGATGATTGCCAGTGTGTGCTTCTTAGACTGAATCTCGTACATAGTTGATTTTACTTTTGCCATGTGCCTTTCTGGTTCCTTAAGGAAGCATTTTCATTCTACTTTTGGTATAGCTGTAGATGTTAGTTATTGTGTATGGATTTCTATCTGATTCTTAAATTAACCAAGTATTTGTTTGCTATAGTACTTTATGGAAAAGAAATTTGGCAGTGATATCGGCAGGTAGAGGGGGATTTGCAAAAAAAAAAACAAAATCAAATTGTGCTGTATGGTTTTGTTTTAATTCAAGGCTTATCTCAATTGCCTATATATGGCCTCTTATATTGTCATCCAGAGGATGGGAGAAGTGGCACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTAGTGGAATCCTATAAAACATACGATGATACTGTTCTAATCAAAACTGCAGACATTGGCCAGGTAAAATGGTGTTAAAATAGTTGGCACATGCATGTTGAAAGACACGACCAGTCCATTTCTTATGTTTTATGTTTTATGGGACGGTGTTGTCTCAACAGATGATCATGGTTAGAGAACCGGGTGACCCTGCTCCAGAGTCGACTGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAACGTAGATTTCGAAGAGAGCCAGATTTAAATGTATGAATTTTCTTATCCCTCTTCCTATTAGTTTTTTGTGTAGGATTTTCTTATGAGTAGACATAATTTGCTGCAACATCGTAATAAATTGACATTTCTACTAATACAATGAGTAGGTAGTTGGGGGGATAAATTATTGAGTGATGCAAGTACAATATAGTTACATAGTTTGTGCTTTACATGTTTGTTTCATATATAAAGCTTAGATTAGCATTAGTCTCTTAATTTTTTTGGTCGATAGTGACATGTTAAGCTCCCTTTTCTTTTCCCCATCTTTTCCATAATAGTAAGTCTACATTTGCATTTGGTCTTCATATCAAAATTTGTTGCATCTAGAAAGGTGTCTCTTGACTCTTGATTCTAACATACTTGATTCTCAAGGTTGTTAAATCGTGAAACGGGACACGTTTCGAAATGGAATTTTAATGTGTCATGTATCGTTAATAACATTGAAATATAAATAACGGATTCTGCTTCTTTTTTTTTCCTTTTTGACAGCCTGAGCTTGTACGGCGAGTGGAGAAAGATTTACTAAACATCATGGCAGGAGGAACTACCGAAAATGCAGATATCCTTGATAGTTTATGTTTTTCAGTTTCATTTGTGTTTTAAACTCAATAGCATTTTAGTTTATGAAACAAAACATGCATCCATCCCCACCTCAACCTGCATCGTAAAGATTGTTTGATTGAGAATTATATTAATTGGCCCTCACATGAAATTCTTGATTAAAAAATTTGATAAAACGTACGGGAGCAGGAAGTGACAATTGTTATCATTTAATTGTTTTCTGTCACAATATGCCTTTTTGCTCGTCTTCTTCTAACATAAGTTTAAAGTTATATGATCTTATGCTGCAATTTTACTTTAGAAGTTCCTTGACTGAGCATTCTCACATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGATAATCCTCATCATGCAAGTGCAAAGCCTGCATCCGCACCTGCAGCAAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGGGAGCCAGAAAGGAGCGACTCTGATGACTCTGATCATTCAATTGATGAGATGTTATTATCCACTTCTTAA

mRNA sequence

TTTAAATAAGATGGAATTTTCTGGATCTGTGTCTCGCGACTCCCTCCCCCGCGCCATCGATATCCCTCCATCTCTATATCTTGCTCAACTATCCGTTGATTCGTGTCTCGCCGGCGGAAATCATCAAAAGAGGGGAACATTTCTAATCTCTCTGGTACGAGGGCTCTTTCAAGCTCAAAGGAAAGGACAGAAAACTTCACACCAATCACAACCTTCGAGCATTCAAGATCCGAAAATTGAATCCGTGAGGCTAAGTTTTGTTGATTTAGACTCTGAAGTTATGGAGGAGCAGTTTGTACTGAGGGTTCCACCTTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGAAGATGCTTCATTGGATTTGTCTTTCTCTGAGGATGGGAGAAGTGGCACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTAGTGGAATCCTATAAAACATACGATGATACTGTTCTAATCAAAACTGCAGACATTGGCCAGATGATCATGGTTAGAGAACCGGGTGACCCTGCTCCAGAGTCGACTGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAACGTAGATTTCGAAGAGAGCCAGATTTAAATCCTGAGCTTGTACGGCGAGTGGAGAAAGATTTACTAAACATCATGGCAGGAGGAACTACCGAAAATGCAGATATCCTTGATACATTCTCACATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGATAATCCTCATCATGCAAGTGCAAAGCCTGCATCCGCACCTGCAGCAAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGGGAGCCAGAAAGGAGCGACTCTGATGACTCTGATCATTCAATTGATGAGATGTTATTATCCACTTCTTAA

Coding sequence (CDS)

ATGGAATTTTCTGGATCTGTGTCTCGCGACTCCCTCCCCCGCGCCATCGATATCCCTCCATCTCTATATCTTGCTCAACTATCCGTTGATTCGTGTCTCGCCGGCGGAAATCATCAAAAGAGGGGAACATTTCTAATCTCTCTGGTACGAGGGCTCTTTCAAGCTCAAAGGAAAGGACAGAAAACTTCACACCAATCACAACCTTCGAGCATTCAAGATCCGAAAATTGAATCCGTGAGGCTAAGTTTTGTTGATTTAGACTCTGAAGTTATGGAGGAGCAGTTTGTACTGAGGGTTCCACCTTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGAAGATGCTTCATTGGATTTGTCTTTCTCTGAGGATGGGAGAAGTGGCACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTAGTGGAATCCTATAAAACATACGATGATACTGTTCTAATCAAAACTGCAGACATTGGCCAGATGATCATGGTTAGAGAACCGGGTGACCCTGCTCCAGAGTCGACTGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAACGTAGATTTCGAAGAGAGCCAGATTTAAATCCTGAGCTTGTACGGCGAGTGGAGAAAGATTTACTAAACATCATGGCAGGAGGAACTACCGAAAATGCAGATATCCTTGATACATTCTCACATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGATAATCCTCATCATGCAAGTGCAAAGCCTGCATCCGCACCTGCAGCAAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGGGAGCCAGAAAGGAGCGACTCTGATGACTCTGATCATTCAATTGATGAGATGTTATTATCCACTTCTTAA

Protein sequence

MEFSGSVSRDSLPRAIDIPPSLYLAQLSVDSCLAGGNHQKRGTFLISLVRGLFQAQRKGQKTSHQSQPSSIQDPKIESVRLSFVDLDSEVMEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKTADIGQMIMVREPGDPAPESTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENADILDTFSHVGVAEQQDDRDDNPHHASAKPASAPAAKPDVMETETNVGEPERSDSDDSDHSIDEMLLSTS

Homology

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BLAST of CcUC09G182590 vs. NCBI nr
Match: XP_022990128.1 (transcription initiation factor TFIID subunit 7 isoform X2 [Cucurbita maxima])

HSP 1 Score: 402.9 bits (1034), Expect = 2.5e-108
Identity = 227/301 (75.42%), Postives = 238/301 (79.07%), Query Frame = 0


Query: 1   MEFSG-SVSRDSLPRAIDIPPSLYLAQLSVDSCLAGGNHQKRGT--FLISLVRGLFQAQR 60
           MEFS  SVS DS P AI  P  L      +DS LAGGN Q  G    ++ LV+GL +AQ 
Sbjct: 1   MEFSRFSVSLDSFPGAIGTPRFLSHC-YPLDSSLAGGNRQLWGDSFCILDLVQGLLKAQS 60

Query: 61  KGQKTSHQSQPSSIQDPKIESVRLSFVDLDSEVMEEQFVLRVPPSVAERIERLLNENASS 120
            G +    + P             SF+D DSE MEEQFVLRVPPSVAERIERLLNENASS
Sbjct: 61  TGYEKPDTNTPFK---------NTSFIDFDSEFMEEQFVLRVPPSVAERIERLLNENASS 120

Query: 121 SEDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKTADIGQMIMV 180
           SED SLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIK ADI QMIMV
Sbjct: 121 SEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIAQMIMV 180

Query: 181 REPGDPAPESTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD 240
           REPGDPAP+STEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD
Sbjct: 181 REPGDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD 240

Query: 241 ILDTFSHVGVAEQQDDRDDNPHHASAKPASAPAAKPDVMETETNVGEPERSDSDDSDHSI 299
                  VGVAE QDD+ +N HHASAKPAS PAAKPDVMETET VGEPERSDSDDSDHSI
Sbjct: 241 -------VGVAEHQDDKHENSHHASAKPASTPAAKPDVMETETTVGEPERSDSDDSDHSI 284

[Close]

BLAST of CcUC09G182590 vs. NCBI nr
Match: XP_022990127.1 (transcription initiation factor TFIID subunit 7 isoform X1 [Cucurbita maxima])

HSP 1 Score: 401.7 bits (1031), Expect = 5.5e-108
Identity = 227/301 (75.42%), Postives = 238/301 (79.07%), Query Frame = 0


Query: 1   MEFSG-SVSRDSLPRAIDIPPSLYLAQLSVDSCLAGGNHQKRGT--FLISLVRGLFQAQR 60
           MEFS  SVS DS P AI  P  L      +DS LAGGN Q  G    ++ LV+GL +AQ 
Sbjct: 1   MEFSRFSVSLDSFPGAIGTPRFLSHC-YPLDSSLAGGNRQLWGDSFCILDLVQGLLKAQS 60

Query: 61  KGQKTSHQSQPSSIQDPKIESVRLSFVDLDSEVMEEQFVLRVPPSVAERIERLLNENASS 120
            G +    + P             SF+D DSE MEEQFVLRVPPSVAERIERLLNENASS
Sbjct: 61  TGYEKPDTNTPFKNTS--------SFIDFDSEFMEEQFVLRVPPSVAERIERLLNENASS 120

Query: 121 SEDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKTADIGQMIMV 180
           SED SLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIK ADI QMIMV
Sbjct: 121 SEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIAQMIMV 180

Query: 181 REPGDPAPESTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD 240
           REPGDPAP+STEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD
Sbjct: 181 REPGDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD 240

Query: 241 ILDTFSHVGVAEQQDDRDDNPHHASAKPASAPAAKPDVMETETNVGEPERSDSDDSDHSI 299
                  VGVAE QDD+ +N HHASAKPAS PAAKPDVMETET VGEPERSDSDDSDHSI
Sbjct: 241 -------VGVAEHQDDKHENSHHASAKPASTPAAKPDVMETETTVGEPERSDSDDSDHSI 285

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BLAST of CcUC09G182590 vs. NCBI nr
Match: KAG6602385.1 (Expansin-A6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 380.6 bits (976), Expect = 1.3e-101
Identity = 205/257 (79.77%), Postives = 213/257 (82.88%), Query Frame = 0


Query: 42  GTFLISLVRGLFQAQRKGQKTSHQSQPSSIQDPKIESVRLSFVDLDSEVMEEQFVLRVPP 101
           G  ++ LV+GL +A   G K    + P             SF+D DSE MEEQFVLRVPP
Sbjct: 230 GFCIVDLVQGLLKAHSTGYKKPDTNTPFK---------NTSFIDFDSEFMEEQFVLRVPP 289

Query: 102 SVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYD 161
           SVAERIERLLNENASSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYD
Sbjct: 290 SVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYD 349

Query: 162 DTVLIKTADIGQMIMVREPGDPAPESTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVE 221
           DTVLIK ADI QMIMVREPGDPAP+STEYRHGLTPPMRDARKRRFRREPDLNPELVRRVE
Sbjct: 350 DTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVE 409

Query: 222 KDLLNIMAGGTTENADILDTFSHVGVAEQQDDRDDNPHHASAKPASAPAAKPDVMETETN 281
           KDLLNIMAGGTTENAD       VGVAE QDDR +N HHASAKPAS PAAKPDVMETET 
Sbjct: 410 KDLLNIMAGGTTENAD-------VGVAEHQDDRHENSHHASAKPASTPAAKPDVMETETT 469

Query: 282 VGEPERSDSDDSDHSID 299
           V EPERSDSDDSDHSID
Sbjct: 470 VREPERSDSDDSDHSID 470

[Close]

BLAST of CcUC09G182590 vs. NCBI nr
Match: XP_008458871.1 (PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo] >XP_008458872.1 PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo])

HSP 1 Score: 375.9 bits (964), Expect = 3.2e-100
Identity = 195/208 (93.75%), Postives = 198/208 (95.19%), Query Frame = 0


Query: 91  MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 150
           MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 151 PCVVESYKTYDDTVLIKTADIGQMIMVREPGDPAPESTEYRHGLTPPMRDARKRRFRREP 210
           PCVVESYKTYDDTVLIK ADIGQMIMVREPGDPAP+STEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 211 DLNPELVRRVEKDLLNIMAGGTTENADILDTFSHVGVAEQQDDRDDNPHHASAKPASAPA 270
           DLNPELVRRVEKDLLNIMAGGTTENAD       VGVAEQQDDRD+NPHH +AKPASAPA
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENAD-------VGVAEQQDDRDENPHHTNAKPASAPA 180

Query: 271 AKPDVMETETNVGEPERSDSDDSDHSID 299
            KPDVMETETNVGEPERSDSDDSDHSID
Sbjct: 181 PKPDVMETETNVGEPERSDSDDSDHSID 201

[Close]

BLAST of CcUC09G182590 vs. NCBI nr
Match: XP_038891097.1 (transcription initiation factor TFIID subunit 7 [Benincasa hispida] >XP_038891098.1 transcription initiation factor TFIID subunit 7 [Benincasa hispida])

HSP 1 Score: 375.6 bits (963), Expect = 4.2e-100
Identity = 195/208 (93.75%), Postives = 199/208 (95.67%), Query Frame = 0


Query: 91  MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 150
           MEEQFVLRVPPSVAERIERLLNE+ASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNESASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 151 PCVVESYKTYDDTVLIKTADIGQMIMVREPGDPAPESTEYRHGLTPPMRDARKRRFRREP 210
           PCVVESYKTYDDTVLIKTADIGQMIMVREPGD AP+STEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKTADIGQMIMVREPGDAAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 211 DLNPELVRRVEKDLLNIMAGGTTENADILDTFSHVGVAEQQDDRDDNPHHASAKPASAPA 270
           DLNPELVRRVEKDLLNIMAGGTTENAD       VGVAEQQDDRD+NPHHASAKPAS PA
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENAD-------VGVAEQQDDRDENPHHASAKPASVPA 180

Query: 271 AKPDVMETETNVGEPERSDSDDSDHSID 299
           AKPDVMETETNVGEPERSDSDDSDHS+D
Sbjct: 181 AKPDVMETETNVGEPERSDSDDSDHSVD 201

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BLAST of CcUC09G182590 vs. ExPASy Swiss-Prot
Match: B9DG24 (Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.3e-63
Identity = 118/155 (76.13%), Postives = 137/155 (88.39%), Query Frame = 0


Query: 91  MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 150
           MEEQF+LRVPPSV+ERI+RLL+E+AS+S++  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 151 PCVVESYKTYDDTVLIKTADIGQMIMVREPGDPAPESTEYRHGLTPPMRDARKRRFRREP 210
           P VVES+KTYDD  L+KTADIGQMIMVREPGDPAP + EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 211 DLNPELVRRVEKDLLNIMAGGTTENADILDTFSHV 246
           DLNPELV+RVE+DLLNI++GGT EN      F H+
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVENVSFSFYFRHM 155

[Close]

BLAST of CcUC09G182590 vs. ExPASy Swiss-Prot
Match: Q9D3R9 (Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN=Taf7l PE=1 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-15
Identity = 59/189 (31.22%), Postives = 98/189 (51.85%), Query Frame = 0


Query: 58  KGQKTSHQSQPSSIQDPKIES-VRLSFVDLDSEVMEEQFVLRVPPSVAERIERLLNENAS 117
           K QKT  Q    + +   +ES +R   V L+   +EEQF+LR+PP  A  + ++++   +
Sbjct: 75  KSQKTPRQ---GTARCQTLESAMRSMSVRLECHDVEEQFILRLPPEQAYAVRKIIHSRNA 134

Query: 118 SSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKTADIGQMIM 177
           + +D  L + FS DG      + +   PA L++LPCV+ S KT D     KTAD+ QM++
Sbjct: 135 AWKD-KLKIDFSPDGHHAVVQVDNVSLPAKLVNLPCVIGSLKTIDRKTFYKTADVSQMLV 194

Query: 178 VREPGDP--APEST---------------------EYRHGLTPPMRDARKRRFRREPDLN 223
               G+P   PE                        ++HG+TPP+++ RK+RFR+     
Sbjct: 195 CSPEGEPHSPPEEPVVSTGPTVIGISEGKAERKKYNWKHGITPPLKNVRKKRFRKTTKKL 254

[Close]

BLAST of CcUC09G182590 vs. ExPASy Swiss-Prot
Match: Q9R1C0 (Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.2e-14
Identity = 53/163 (32.52%), Postives = 74/163 (45.40%), Query Frame = 0


Query: 91  MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 150
           +E QF+LR+PP  A  + R +     + +D  L +    DGR G   +      A L+DL
Sbjct: 12  LESQFILRLPPEYAATVRRAVQSGHVNLKD-KLSIELHPDGRHGIVRVDRVPLAAKLVDL 71

Query: 151 PCVVESYKTYDDTVLIKTADIGQMIMVREPGDPAPESTE--------------------- 210
           PCV ES KT D     KTADI QM++    GD  P   E                     
Sbjct: 72  PCVTESLKTIDKKTFYKTADISQMLVATVDGDLYPPVEEAAATADPKANKKKDKDKEKKF 131

Query: 211 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 224
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 VWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]

BLAST of CcUC09G182590 vs. ExPASy Swiss-Prot
Match: Q6R1L1 (Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-13
Identity = 55/163 (33.74%), Postives = 81/163 (49.69%), Query Frame = 0


Query: 91  MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 150
           +E QF+LR+PP  A  + R +     + +D  L +    DGR G   +      A L+DL
Sbjct: 12  LESQFILRLPPEYASTVRRAVQSGHVNLKD-RLTIELHPDGRHGIVRVDRVPLAAKLVDL 71

Query: 151 PCVVESYKTYDDTVLIKTADIGQMIM----------VREPGDPA-PESTE---------- 210
           PCV+ES KT D     KTADI QM++          V EP  PA P++++          
Sbjct: 72  PCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVAPADPKASKKKDKDKEKKF 131

Query: 211 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 224
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 VWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]

BLAST of CcUC09G182590 vs. ExPASy Swiss-Prot
Match: Q15545 (Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.3e-13
Identity = 52/163 (31.90%), Postives = 75/163 (46.01%), Query Frame = 0


Query: 91  MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 150
           +E QF+LR+PP  A  + R +     + +D  L +    DGR G   +      + L+DL
Sbjct: 12  LESQFILRLPPEYASTVRRAVQSGHVNLKD-RLTIELHPDGRHGIVRVDRVPLASKLVDL 71

Query: 151 PCVVESYKTYDDTVLIKTADIGQMIMVREPGDPAPESTE--------------------- 210
           PCV+ES KT D     KTADI QM++    GD  P   E                     
Sbjct: 72  PCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVASTDPKASKKKDKDKEKKF 131

Query: 211 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 224
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 IWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]

BLAST of CcUC09G182590 vs. ExPASy TrEMBL
Match: A0A6J1JSC8 (transcription initiation factor TFIID subunit 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.2e-108
Identity = 227/301 (75.42%), Postives = 238/301 (79.07%), Query Frame = 0


Query: 1   MEFSG-SVSRDSLPRAIDIPPSLYLAQLSVDSCLAGGNHQKRGT--FLISLVRGLFQAQR 60
           MEFS  SVS DS P AI  P  L      +DS LAGGN Q  G    ++ LV+GL +AQ 
Sbjct: 1   MEFSRFSVSLDSFPGAIGTPRFLSHC-YPLDSSLAGGNRQLWGDSFCILDLVQGLLKAQS 60

Query: 61  KGQKTSHQSQPSSIQDPKIESVRLSFVDLDSEVMEEQFVLRVPPSVAERIERLLNENASS 120
            G +    + P             SF+D DSE MEEQFVLRVPPSVAERIERLLNENASS
Sbjct: 61  TGYEKPDTNTPFK---------NTSFIDFDSEFMEEQFVLRVPPSVAERIERLLNENASS 120

Query: 121 SEDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKTADIGQMIMV 180
           SED SLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIK ADI QMIMV
Sbjct: 121 SEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIAQMIMV 180

Query: 181 REPGDPAPESTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD 240
           REPGDPAP+STEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD
Sbjct: 181 REPGDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD 240

Query: 241 ILDTFSHVGVAEQQDDRDDNPHHASAKPASAPAAKPDVMETETNVGEPERSDSDDSDHSI 299
                  VGVAE QDD+ +N HHASAKPAS PAAKPDVMETET VGEPERSDSDDSDHSI
Sbjct: 241 -------VGVAEHQDDKHENSHHASAKPASTPAAKPDVMETETTVGEPERSDSDDSDHSI 284

[Close]

BLAST of CcUC09G182590 vs. ExPASy TrEMBL
Match: A0A6J1JHS5 (transcription initiation factor TFIID subunit 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.6e-108
Identity = 227/301 (75.42%), Postives = 238/301 (79.07%), Query Frame = 0


Query: 1   MEFSG-SVSRDSLPRAIDIPPSLYLAQLSVDSCLAGGNHQKRGT--FLISLVRGLFQAQR 60
           MEFS  SVS DS P AI  P  L      +DS LAGGN Q  G    ++ LV+GL +AQ 
Sbjct: 1   MEFSRFSVSLDSFPGAIGTPRFLSHC-YPLDSSLAGGNRQLWGDSFCILDLVQGLLKAQS 60

Query: 61  KGQKTSHQSQPSSIQDPKIESVRLSFVDLDSEVMEEQFVLRVPPSVAERIERLLNENASS 120
            G +    + P             SF+D DSE MEEQFVLRVPPSVAERIERLLNENASS
Sbjct: 61  TGYEKPDTNTPFKNTS--------SFIDFDSEFMEEQFVLRVPPSVAERIERLLNENASS 120

Query: 121 SEDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKTADIGQMIMV 180
           SED SLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIK ADI QMIMV
Sbjct: 121 SEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIAQMIMV 180

Query: 181 REPGDPAPESTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD 240
           REPGDPAP+STEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD
Sbjct: 181 REPGDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD 240

Query: 241 ILDTFSHVGVAEQQDDRDDNPHHASAKPASAPAAKPDVMETETNVGEPERSDSDDSDHSI 299
                  VGVAE QDD+ +N HHASAKPAS PAAKPDVMETET VGEPERSDSDDSDHSI
Sbjct: 241 -------VGVAEHQDDKHENSHHASAKPASTPAAKPDVMETETTVGEPERSDSDDSDHSI 285

[Close]

BLAST of CcUC09G182590 vs. ExPASy TrEMBL
Match: A0A0A0KSB3 (TAFII55_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517200 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.5e-103
Identity = 219/293 (74.74%), Postives = 232/293 (79.18%), Query Frame = 0


Query: 8   SRDSLPRAIDIP--PSLYLAQLSVDSCLAGGNHQKRGTFLISLVRGLFQAQRKGQKTSHQ 67
           S  SLPRAI I   PSL LA+ S  S +     ++R  F   L    F+ +   +K    
Sbjct: 27  SLHSLPRAIGIHILPSLSLARRSPPSII-----KRREQFYSLLCEACFKFEPNNRKLH-- 86

Query: 68  SQPSSIQDPKIESVRLSFVDLDSEVMEEQFVLRVPPSVAERIERLLNENASSSEDASLDL 127
                     I     SFV+LDSEVMEEQFVLRVPPSVAERIERLLNENASSS+DASLDL
Sbjct: 87  ---------TITFQHSSFVNLDSEVMEEQFVLRVPPSVAERIERLLNENASSSDDASLDL 146

Query: 128 SFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKTADIGQMIMVREPGDPAP 187
           SFS+DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIK ADIGQMIMVREP DPAP
Sbjct: 147 SFSDDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAP 206

Query: 188 ESTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENADILDTFSHV 247
           +STEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD       V
Sbjct: 207 DSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENAD-------V 266

Query: 248 GVAEQQDDRDDNPHHASAKPASAPAAKPDVMETETNVGEPERSDSDDSDHSID 299
           GVAEQQDDRD+NP H +AKPASAPA KPDVMETETNVGEPERSDSDDSD SID
Sbjct: 267 GVAEQQDDRDENPDHTNAKPASAPAPKPDVMETETNVGEPERSDSDDSDRSID 296

[Close]

BLAST of CcUC09G182590 vs. ExPASy TrEMBL
Match: A0A1S3C8V9 (transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC103498146 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.6e-100
Identity = 195/208 (93.75%), Postives = 198/208 (95.19%), Query Frame = 0


Query: 91  MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 150
           MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 151 PCVVESYKTYDDTVLIKTADIGQMIMVREPGDPAPESTEYRHGLTPPMRDARKRRFRREP 210
           PCVVESYKTYDDTVLIK ADIGQMIMVREPGDPAP+STEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 211 DLNPELVRRVEKDLLNIMAGGTTENADILDTFSHVGVAEQQDDRDDNPHHASAKPASAPA 270
           DLNPELVRRVEKDLLNIMAGGTTENAD       VGVAEQQDDRD+NPHH +AKPASAPA
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENAD-------VGVAEQQDDRDENPHHTNAKPASAPA 180

Query: 271 AKPDVMETETNVGEPERSDSDDSDHSID 299
            KPDVMETETNVGEPERSDSDDSDHSID
Sbjct: 181 PKPDVMETETNVGEPERSDSDDSDHSID 201

[Close]

BLAST of CcUC09G182590 vs. ExPASy TrEMBL
Match: A0A6J1JR83 (transcription initiation factor TFIID subunit 7 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 8.0e-97
Identity = 190/208 (91.35%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 91  MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 150
           MEEQFVLRVPPSVAERIERLLNENASSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 151 PCVVESYKTYDDTVLIKTADIGQMIMVREPGDPAPESTEYRHGLTPPMRDARKRRFRREP 210
           PCVVESYKTYDDTVLIK ADI QMIMVREPGDPAP+STEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 211 DLNPELVRRVEKDLLNIMAGGTTENADILDTFSHVGVAEQQDDRDDNPHHASAKPASAPA 270
           DLNPELVRRVEKDLLNIMAGGTTENAD       VGVAE QDD+ +N HHASAKPAS PA
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENAD-------VGVAEHQDDKHENSHHASAKPASTPA 180

Query: 271 AKPDVMETETNVGEPERSDSDDSDHSID 299
           AKPDVMETET VGEPERSDSDDSDHSID
Sbjct: 181 AKPDVMETETTVGEPERSDSDDSDHSID 201

[Close]

BLAST of CcUC09G182590 vs. TAIR 10
Match: AT1G55300.1 (TBP-associated factor 7 )

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-67
Identity = 141/214 (65.89%), Postives = 171/214 (79.91%), Query Frame = 0


Query: 91  MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 150
           MEEQF+LRVPPSV+ERI+RLL+E+AS+S++  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 151 PCVVESYKTYDDTVLIKTADIGQMIMVREPGDPAPESTEYRHGLTPPMRDARKRRFRREP 210
           P VVES+KTYDD  L+KTADIGQMIMVREPGDPAP + EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 211 DLNPELVRRVEKDLLNIMAGGTTENADILDTFSHVGVAEQQDD-RDDNPHHASAKPASA- 270
           DLNPELV+RVE+DLLNI++GGT EN           V EQ++   ++N  +AS K +S+ 
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVEN-----------VHEQEEPATNENASNASKKVSSSS 180

Query: 271 --PAAKPDVMETETN--VG-EPERSDSDDSDHSI 298
             P  KP+  ET T+   G EPERS+S+DSD S+
Sbjct: 181 PTPVEKPEAPETGTSNPTGVEPERSESEDSDDSM 203

[Close]

BLAST of CcUC09G182590 vs. TAIR 10
Match: AT1G55300.2 (TBP-associated factor 7 )

HSP 1 Score: 243.0 bits (619), Expect = 3.0e-64
Identity = 118/155 (76.13%), Postives = 137/155 (88.39%), Query Frame = 0


Query: 91  MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 150
           MEEQF+LRVPPSV+ERI+RLL+E+AS+S++  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 151 PCVVESYKTYDDTVLIKTADIGQMIMVREPGDPAPESTEYRHGLTPPMRDARKRRFRREP 210
           P VVES+KTYDD  L+KTADIGQMIMVREPGDPAP + EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 211 DLNPELVRRVEKDLLNIMAGGTTENADILDTFSHV 246
           DLNPELV+RVE+DLLNI++GGT EN      F H+
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVENVSFSFYFRHM 155

The following BLAST results are available for this feature:

BLAST of CcUC09G182590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990128.1	2.5e-108	75.42	transcription initiation factor TFIID subunit 7 isoform X2 [Cucurbita maxima]	[more]
XP_022990127.1	5.5e-108	75.42	transcription initiation factor TFIID subunit 7 isoform X1 [Cucurbita maxima]	[more]
KAG6602385.1	1.3e-101	79.77	Expansin-A6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008458871.1	3.2e-100	93.75	PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo] >XP_00...	[more]
XP_038891097.1	4.2e-100	93.75	transcription initiation factor TFIID subunit 7 [Benincasa hispida] >XP_03889109...	[more]

BLAST of CcUC09G182590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DG24	4.3e-63	76.13	Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9D3R9	1.1e-15	31.22	Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN...	[more]
Q9R1C0	6.2e-14	32.52	Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7...	[more]
Q6R1L1	1.4e-13	33.74	Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 G...	[more]
Q15545	5.3e-13	31.90	Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 ...	[more]

BLAST of CcUC09G182590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSC8	1.2e-108	75.42	transcription initiation factor TFIID subunit 7 isoform X2 OS=Cucurbita maxima O...	[more]
A0A6J1JHS5	2.6e-108	75.42	transcription initiation factor TFIID subunit 7 isoform X1 OS=Cucurbita maxima O...	[more]
A0A0A0KSB3	1.5e-103	74.74	TAFII55_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517200 P...	[more]
A0A1S3C8V9	1.6e-100	93.75	transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JR83	8.0e-97	91.35	transcription initiation factor TFIID subunit 7 isoform X3 OS=Cucurbita maxima O...	[more]

BLAST of CcUC09G182590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55300.1	1.3e-67	65.89	TBP-associated factor 7	[more]
AT1G55300.2	3.0e-64	76.13	TBP-associated factor 7	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006751	TAFII55 protein, conserved region	SMART	SM01370	TAFII55_N_2	coord: 91..235 e-value: 2.1E-62 score: 223.3
IPR006751	TAFII55 protein, conserved region	PFAM	PF04658	TAFII55_N	coord: 91..225 e-value: 2.0E-32 score: 112.2
IPR006751	TAFII55 protein, conserved region	CDD	cd08047	TAF7	coord: 92..238 e-value: 1.09569E-44 score: 147.801
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..298
None	No IPR available	PANTHER	PTHR12228:SF0	TAF7 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR	coord: 87..296
IPR037817	Transcription initiation factor TFIID subunit 7	PANTHER	PTHR12228	TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED	coord: 87..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G182590.1	CcUC09G182590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0003743	translation initiation factor activity