CcUC09G182570 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G182570
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ribosomal RNA large subunit methyltransferase E
Location	CicolChr09: 34024928 .. 34026621 (-)
RNA-Seq Expression	CcUC09G182570
Synteny	CcUC09G182570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGGGCGGGGGCACCCGATTTCTTCTACAGAGAGGCTCAACGCCTTGGCTATGTCGCAAGATCCGCCTTCAAGGTATAATCTACTTCCCCTCACTCTTTTTCCTCCTCCTTATAATCTTCGAGCCTCGCCAATCCTAATTATATGTCTTTATCCTCCTCTGCTCATAACAGTTGCTTCAGATTCAGAACCAATTCAAATTGATTACTTCAGGCTCCTCTGTTTTGGACCTTGGTTGTGCTCCCGGTGCCTGGCTTCAGGTCTGTTTTCTGCACTCTTCACCTCCATTCCGCTAACTTTTCCCTCCTTTTCACTTCCCAAATATTTCTCTGTTGGTGTCAGGTAGCTTGCCAGAGTCTGGGGCCTCTGAGAAATGGAGGTTCTGTTTTGGGTATTGATATCAAGGTGAACTGTTTTTCTTCTTCTGGGTTCCTTATTTATGCTGATTTTCATTTATCAGGAAGTAATAATTTGTAAAAGAAAATGTGGGTCGTGCAGAACAGAAGGTAAAGGTTCCTCATGTGCATTGTGACTCGAGGGTTCAAACTGTTTGTGCTGATGTAATGAACCTTCCCAAAAACAAATTGAAGTCACTATCTCCTAAGGTAACTTCACTTATCAAAAGTAGGAAATGTCTTGTAGTATTTCTTTTTGCCAATGTCATTAACGTTGAAAATTCTTTCTTCCAGTCTCTTATCTTTGAATGACGTTATTATTATATCGCCCATTAACTCAATTACTAGAATTCTATGTCCCAATTGGAATGTGTTCATCTCTTCAGTTTAATAGTGTTTTTATGTATCAAGTCTTATGATGTATGTATTACTAAGAGAGCTTTATATTTTGATTAAGGATGTTGTTTGGGTTTAGGATATGATGATGGCACTAAGGTTGTGTCAACTTAGTTGAGACTAGTGTGCCTGAAGATCCTTATTTATGTTTTAATTTTCTTTGATCTCTATGTATGTCTGCTTGTGTTTTGAGCATTAGTCTTTTTGCATTATATCAATGAAAAGTTTGTTTACATTTAGAAAAAAAAAAAAAACTAGAATTCAATTGTGCAAGTTTTTTTGTGAAATGGTTTGGTTTAGGGAATACAATATTCGCTCTTTACCTTAGAAAATTAAAGTTAAAGTTGTTAAACAAAAAAGTATGAAGAGAATGTGCAGTAGTGACTGGGAAGAAAATGTTACACTGTCTAAATCCTGTTATTTGCTTGGTTCTGTAGGAGAAGGGATTTTCTGTAATACTCTCAGACATGTGCCCCTTAGTATCTGGAATCACCACTAGAGATGCGACATTATCAGTTGAATTAGGGATGCAAGCAGTTAATTTGGCTCTTGGAGAAGCTGCGTTAGGTGTTGGAGATGCTATACTTGGAAAGGACAAGGACAATTTGGATGATTCAACTTCAGTTTCAGATTGTGATGGCGTGTTACAACAAGGAGGCCACCTCGTTATAAAACTATTGGAGAGTGAAGATTCCCAAGGTATAATTTTAATTCCACATAAAGTCTATAGCTGGTTTTGTAGTTGGTTTGTCTTTACATCTTCCTCTATTCTTTATCTCAGAATTCAGCCGGATGTTGAAACCACTCTTCAGAAAGGCATCCTGGTTGAGGCCTAAGGCGACTAGATCGTCGTCAAGAGAGATTTATCTGATATGTCAAAGCTTGAAGGCAAGAACATAA

mRNA sequence

ATGAGTGGGGCGGGGGCACCCGATTTCTTCTACAGAGAGGCTCAACGCCTTGGCTATGTCGCAAGATCCGCCTTCAAGTTGCTTCAGATTCAGAACCAATTCAAATTGATTACTTCAGGCTCCTCTGTTTTGGACCTTGGTTGTGCTCCCGGTGCCTGGCTTCAGGTAGCTTGCCAGAGTCTGGGGCCTCTGAGAAATGGAGGTTCTGTTTTGGGTATTGATATCAAGAAGGTAAAGGTTCCTCATGTGCATTGTGACTCGAGGGTTCAAACTGTTTGTGCTGATGTAATGAACCTTCCCAAAAACAAATTGAAGTCACTATCTCCTAAGGAGAAGGGATTTTCTGTAATACTCTCAGACATGTGCCCCTTAGTATCTGGAATCACCACTAGAGATGCGACATTATCAGTTGAATTAGGGATGCAAGCAGTTAATTTGGCTCTTGGAGAAGCTGCGTTAGGTGTTGGAGATGCTATACTTGGAAAGGACAAGGACAATTTGGATGATTCAACTTCAGTTTCAGATTGTGATGGCGTGTTACAACAAGGAGGCCACCTCGTTATAAAACTATTGGAGAGTGAAGATTCCCAAGAATTCAGCCGGATGTTGAAACCACTCTTCAGAAAGGCATCCTGGTTGAGGCCTAAGGCGACTAGATCGTCGTCAAGAGAGATTTATCTGATATGTCAAAGCTTGAAGGCAAGAACATAA

Coding sequence (CDS)

ATGAGTGGGGCGGGGGCACCCGATTTCTTCTACAGAGAGGCTCAACGCCTTGGCTATGTCGCAAGATCCGCCTTCAAGTTGCTTCAGATTCAGAACCAATTCAAATTGATTACTTCAGGCTCCTCTGTTTTGGACCTTGGTTGTGCTCCCGGTGCCTGGCTTCAGGTAGCTTGCCAGAGTCTGGGGCCTCTGAGAAATGGAGGTTCTGTTTTGGGTATTGATATCAAGAAGGTAAAGGTTCCTCATGTGCATTGTGACTCGAGGGTTCAAACTGTTTGTGCTGATGTAATGAACCTTCCCAAAAACAAATTGAAGTCACTATCTCCTAAGGAGAAGGGATTTTCTGTAATACTCTCAGACATGTGCCCCTTAGTATCTGGAATCACCACTAGAGATGCGACATTATCAGTTGAATTAGGGATGCAAGCAGTTAATTTGGCTCTTGGAGAAGCTGCGTTAGGTGTTGGAGATGCTATACTTGGAAAGGACAAGGACAATTTGGATGATTCAACTTCAGTTTCAGATTGTGATGGCGTGTTACAACAAGGAGGCCACCTCGTTATAAAACTATTGGAGAGTGAAGATTCCCAAGAATTCAGCCGGATGTTGAAACCACTCTTCAGAAAGGCATCCTGGTTGAGGCCTAAGGCGACTAGATCGTCGTCAAGAGAGATTTATCTGATATGTCAAAGCTTGAAGGCAAGAACATAA

Protein sequence

MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSDMCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLQQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART

Homology

[Close]

BLAST of CcUC09G182570 vs. NCBI nr
Match: XP_038889598.1 (ribosomal RNA large subunit methyltransferase E isoform X1 [Benincasa hispida])

HSP 1 Score: 443.0 bits (1138), Expect = 1.7e-120
Identity = 225/236 (95.34%), Postives = 230/236 (97.46%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGID+KKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCPLVSGITTRDA LSVELGMQAVNLALGEAALGVGD I GKD DN+DDSTSVSDCDGVL
Sbjct: 121 MCPLVSGITTRDAALSVELGMQAVNLALGEAALGVGDVIHGKDNDNVDDSTSVSDCDGVL 180

Query: 181 QQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART 237
           +QGGHLVIKLLESED+QEFSRMLKPLFRK+S LRPKATRSSSREIYLICQSLKART
Sbjct: 181 RQGGHLVIKLLESEDTQEFSRMLKPLFRKSSLLRPKATRSSSREIYLICQSLKART 236

[Close]

BLAST of CcUC09G182570 vs. NCBI nr
Match: XP_008458862.1 (PREDICTED: ribosomal RNA large subunit methyltransferase E isoform X3 [Cucumis melo])

HSP 1 Score: 434.5 bits (1116), Expect = 5.9e-118
Identity = 220/238 (92.44%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPK+KLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCP+VSGITTRDA LSVELGMQAVNLALGEAALGVG+ I GKDKD++DDSTS SDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 QQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS--LKART 237
           ++GGHLV+KLLESED+QEFSRMLKPLFRK+SWLRPKATRSSSREIYLICQS  L+ART
Sbjct: 181 RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 238

[Close]

BLAST of CcUC09G182570 vs. NCBI nr
Match: XP_004142767.1 (uncharacterized protein LOC101216412 isoform X2 [Cucumis sativus] >KGN51324.1 hypothetical protein Csa_007820 [Cucumis sativus])

HSP 1 Score: 434.1 bits (1115), Expect = 7.7e-118
Identity = 222/238 (93.28%), Postives = 230/238 (96.64%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGIDIKKVKVPH+HCDSRVQTV ADVMNLPK+KLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCPLVSGITTRDA LSVELGMQAVNLALGEAALGVGD I GKDKD++DDSTS SDCDGVL
Sbjct: 121 MCPLVSGITTRDAALSVELGMQAVNLALGEAALGVGDVIHGKDKDSVDDSTSASDCDGVL 180

Query: 181 QQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS--LKART 237
           +QGGHLV+KLLESED+QEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS  L+ART
Sbjct: 181 RQGGHLVLKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLHLQART 238

[Close]

BLAST of CcUC09G182570 vs. NCBI nr
Match: KAG6602386.1 (hypothetical protein SDJN03_07619, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 422.2 bits (1084), Expect = 3.0e-114
Identity = 215/238 (90.34%), Postives = 230/238 (96.64%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGPL+NGGSV+GID+KKVKVPHVHCDSRVQTVCADVMNLPKNKLK+LSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAIL-GKDK-DNLDDSTSVSDCDG 180
           MCP+VSGITTRDA+LSVELGMQAVNLALGEAAL  GD ++ GK+K DN+DDS SVSD DG
Sbjct: 121 MCPMVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSASVSDYDG 180

Query: 181 VLQQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART 237
           +LQ+GGHLVIKLLESED+QEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL+A+T
Sbjct: 181 LLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

[Close]

BLAST of CcUC09G182570 vs. NCBI nr
Match: XP_022960605.1 (uncharacterized protein LOC111461336 [Cucurbita moschata])

HSP 1 Score: 421.8 bits (1083), Expect = 3.9e-114
Identity = 216/238 (90.76%), Postives = 229/238 (96.22%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGPL+NGGSV+GID+KKVKVPHVHCDSRVQTVCADVMNLPKNKLK+LSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAIL-GKDK-DNLDDSTSVSDCDG 180
           MCPLVSGITTRDA+LSVELGMQAVNLALGEAAL  GD ++ GK+K DN+DDS  VSD DG
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSALVSDYDG 180

Query: 181 VLQQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART 237
           VLQ+GGHLVIKLLESED+QEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL+A+T
Sbjct: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

[Close]

BLAST of CcUC09G182570 vs. ExPASy Swiss-Prot
Match: A8ZT18 (Ribosomal RNA large subunit methyltransferase E OS=Desulfococcus oleovorans (strain DSM 6200 / JCM 39069 / Hxd3) OX=96561 GN=rlmE PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-23
Identity = 76/235 (32.34%), Postives = 113/235 (48.09%), Query Frame = 0


Query: 3   GAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLG 62
           G   PD + R+A+   Y ARS +KL +IQ +  ++  G++VLDLGC PG+W+  A +++G
Sbjct: 8   GRKTPDHYARKAKTEHYPARSVYKLQEIQKKHNVLKPGNAVLDLGCFPGSWMMFAAETVG 67

Query: 63  PLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLK-SLSPKEKGFSVILSDM 122
               GG V GID+KKV     H  ++  ++  D+  + +  L  +L P      V+LSDM
Sbjct: 68  ---RGGKVTGIDLKKVA---THMPAQATSLQEDIYEIDREALAGTLGP----LDVVLSDM 127

Query: 123 CPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLQ 182
            P   G    DA  S  L   A++LAL                              +L+
Sbjct: 128 APDTMGNKFTDAARSFHLAAAALDLAL-----------------------------FLLK 187

Query: 183 QGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART 237
            GGH V K+ + ED Q F  M+K  F +    +P+  R  S+E Y+I  S K  T
Sbjct: 188 PGGHFVCKVFQGEDFQNFVNMVKAEFERHKVFKPETCRKDSKETYVIGFSKKEST 203

[Close]

BLAST of CcUC09G182570 vs. ExPASy Swiss-Prot
Match: B8FL12 (Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum aliphaticivorans OX=218208 GN=rlmE PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-22
Identity = 75/226 (33.19%), Postives = 110/226 (48.67%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLRNG 67
           D +  +AQ+ G+ ARS FKL ++Q ++K++  G  VLDLGCAPG+WL+ A Q +G   + 
Sbjct: 13  DHYTDKAQKAGFPARSVFKLEEMQKRWKILRPGQKVLDLGCAPGSWLKYASQIVG---DS 72

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSDMCPLVSG 127
           G V+G+D+K +  P        Q +  D   L +  L  +    + F V+LSDM P  +G
Sbjct: 73  GRVIGLDLKPMDQPD---KPNAQFIQGDAFELTQEFLDEIG---RDFDVVLSDMAPNTTG 132

Query: 128 ITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLQQGGHLV 187
           I   DA  S          AL E+AL                         VL+ GG  V
Sbjct: 133 IKNVDALKSA---------ALCESALAAAVT--------------------VLKPGGSFV 192

Query: 188 IKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLK 234
            K+ + E    F + +K  F K    +P++TR  SREIY++  S K
Sbjct: 193 CKIFQGEGFDAFIKDVKKYFTKHKIFKPESTRKQSREIYVVGWSKK 200

[Close]

BLAST of CcUC09G182570 vs. ExPASy Swiss-Prot
Match: B9LSX2 (Ribosomal RNA large subunit methyltransferase E OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) OX=416348 GN=rlmE PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-21
Identity = 68/225 (30.22%), Postives = 109/225 (48.44%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLRNG 67
           D +Y ++++ GY ARSA+KL QI  +  L   G +V+DLG APG WLQVA + +G     
Sbjct: 5   DEYYNKSKQQGYRARSAYKLKQIDEEANLFERGDTVVDLGAAPGGWLQVAAEEVG---ES 64

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSDMCPLVSG 127
           G+V+G+D++++       D  V+T+  D+           +  E+G  V++SDM P ++G
Sbjct: 65  GTVVGVDLQRIDDLD---DHDVETIRGDMTEERTRHYLREAIGERGADVVISDMAPNMTG 124

Query: 128 ITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLQQGGHLV 187
               D   SV L  QA ++A                             + +L  GG  V
Sbjct: 125 EYALDHARSVHLARQAFDVA-----------------------------EELLAPGGDFV 184

Query: 188 IKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL 233
           +K+ + ED   F   ++  F     + P A+R SS E+YL+ + L
Sbjct: 185 VKVFQGEDLDAFREDVRAEFEYLRTVSPPASRDSSSEVYLVAKGL 194

[Close]

BLAST of CcUC09G182570 vs. ExPASy Swiss-Prot
Match: Q58771 (Ribosomal RNA large subunit methyltransferase E OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=rlmE PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.0e-21
Identity = 68/224 (30.36%), Postives = 113/224 (50.45%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLRNG 67
           DF+Y+ A++L Y +R++FKL+Q+  +F +I  G  VLDLGCAPG W+QVA + +G   + 
Sbjct: 15  DFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVAREIVG---DK 74

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPK-EKGFSVILSDMCPLVS 127
           G V+GID++ VK      D+ V       +    NK++ L P  EK   V++SD  P +S
Sbjct: 75  GFVIGIDLQPVK--PFEYDNVVAIKGDFTLEENLNKIRELIPNDEKKVDVVISDASPNIS 134

Query: 128 GITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLQQGGHL 187
           G    D   S++L   A+ +A                               +L++ G+ 
Sbjct: 135 GYWDIDHARSIDLVTTALQIA-----------------------------TEMLKERGNF 194

Query: 188 VIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQ 231
           V K+   +   ++  ++K  F K    +P+A+R  S E+Y+I +
Sbjct: 195 VAKVFYGDMIDDYVNLVKKYFEKVYITKPQASRKESAEVYVIAK 204

[Close]

BLAST of CcUC09G182570 vs. ExPASy Swiss-Prot
Match: O28228 (Ribosomal RNA large subunit methyltransferase E OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) OX=224325 GN=rlmE PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.6e-20
Identity = 71/223 (31.84%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLRNG 67
           D++Y +A++ GY +R+A+KLLQ+   FKLI  G  VLDLG  PG W QVA         G
Sbjct: 6   DYYYWKAKKEGYRSRAAYKLLQMNRTFKLIREGDLVLDLGATPGGWSQVAALL------G 65

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPK--NKLKSLSPKEKGFSVILSDMCPLV 127
             V+ +DI  +K         V  +  D+  LP+   K++ +SP    + V++SD  P +
Sbjct: 66  ARVVAVDINPMKPL-----ENVTFIRGDI-TLPETLEKIREISP---DYDVVMSDASPKI 125

Query: 128 SGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLQQGGH 187
           SG  T D   S++L   + ++A                               VL+ GG+
Sbjct: 126 SGKWTIDHLRSIDLARASFSIA-----------------------------KEVLKPGGN 184

Query: 188 LVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLI 229
            V+K+ + E+ Q+F   LKP FR   +  P+A+R  S E+Y I
Sbjct: 186 FVVKVFQGEEIQKFFNELKPHFRFKKFHSPQASRKRSAEVYFI 184

[Close]

BLAST of CcUC09G182570 vs. ExPASy TrEMBL
Match: A0A1S3C9F1 (ribosomal RNA large subunit methyltransferase E isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498139 PE=3 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 2.8e-118
Identity = 220/238 (92.44%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPK+KLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCP+VSGITTRDA LSVELGMQAVNLALGEAALGVG+ I GKDKD++DDSTS SDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 QQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS--LKART 237
           ++GGHLV+KLLESED+QEFSRMLKPLFRK+SWLRPKATRSSSREIYLICQS  L+ART
Sbjct: 181 RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 238

[Close]

BLAST of CcUC09G182570 vs. ExPASy TrEMBL
Match: A0A0A0KQZ0 (FtsJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517710 PE=3 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.7e-118
Identity = 222/238 (93.28%), Postives = 230/238 (96.64%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGIDIKKVKVPH+HCDSRVQTV ADVMNLPK+KLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCPLVSGITTRDA LSVELGMQAVNLALGEAALGVGD I GKDKD++DDSTS SDCDGVL
Sbjct: 121 MCPLVSGITTRDAALSVELGMQAVNLALGEAALGVGDVIHGKDKDSVDDSTSASDCDGVL 180

Query: 181 QQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS--LKART 237
           +QGGHLV+KLLESED+QEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS  L+ART
Sbjct: 181 RQGGHLVLKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLHLQART 238

[Close]

BLAST of CcUC09G182570 vs. ExPASy TrEMBL
Match: A0A6J1H9J8 (uncharacterized protein LOC111461336 OS=Cucurbita moschata OX=3662 GN=LOC111461336 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.9e-114
Identity = 216/238 (90.76%), Postives = 229/238 (96.22%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGPL+NGGSV+GID+KKVKVPHVHCDSRVQTVCADVMNLPKNKLK+LSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAIL-GKDK-DNLDDSTSVSDCDG 180
           MCPLVSGITTRDA+LSVELGMQAVNLALGEAAL  GD ++ GK+K DN+DDS  VSD DG
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSALVSDYDG 180

Query: 181 VLQQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART 237
           VLQ+GGHLVIKLLESED+QEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL+A+T
Sbjct: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

[Close]

BLAST of CcUC09G182570 vs. ExPASy TrEMBL
Match: A0A1S3C8U8 (ribosomal RNA large subunit methyltransferase E isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498139 PE=3 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.5e-114
Identity = 220/261 (84.29%), Postives = 231/261 (88.51%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPK+KLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCP+VSGITTRDA LSVELGMQAVNLALGEAALGVG+ I GKDKD++DDSTS SDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 QQGGHLVIKLLESEDSQ-----------------------EFSRMLKPLFRKASWLRPKA 237
           ++GGHLV+KLLESED+Q                       EFSRMLKPLFRK+SWLRPKA
Sbjct: 181 RKGGHLVLKLLESEDTQGRILFPQLFYTWFCLPSQSSFISEFSRMLKPLFRKSSWLRPKA 240

[Close]

BLAST of CcUC09G182570 vs. ExPASy TrEMBL
Match: A0A6J1JHT1 (uncharacterized protein LOC111487116 OS=Cucurbita maxima OX=3661 GN=LOC111487116 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 4.0e-112
Identity = 214/239 (89.54%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGPL+NGGSV+GID+KKVKVPHV+CDSRVQTVCADVMNLPKNKLK+LSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVYCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAA-LGVGDAIL-GKDK-DNLDDSTSVSDCD 180
           MCPLVSGITTRDA+LSVELGMQAVN+ALGEAA L  GD ++ GK+K DN+DDS  VSD D
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNMALGEAALLSHGDDVMHGKNKEDNVDDSALVSDYD 180

Query: 181 GVLQQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART 237
           GVLQ+GGHLVIKLLESED+QEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL+A+T
Sbjct: 181 GVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 239

[Close]

BLAST of CcUC09G182570 vs. TAIR 10
Match: AT5G13830.1 (FtsJ-like methyltransferase family protein )

HSP 1 Score: 321.2 bits (822), Expect = 6.8e-88
Identity = 165/233 (70.82%), Postives = 189/233 (81.12%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFKLLQIQ Q+KLI  GSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGPLR+GG V+G+DIKKVKVP   CDSRVQT+ ADV+N P+ K++ LSP++ GFSVILSD
Sbjct: 61  LGPLRSGGIVVGMDIKKVKVP-PQCDSRVQTIAADVLNFPRQKIRELSPQQLGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MC  VSGITTRDA LS ELGM+A++LA+G+AA+            N DD        GVL
Sbjct: 121 MCHSVSGITTRDAALSAELGMRALDLAVGQAAI--------SQSPNDDDGGPNESRPGVL 180

Query: 181 QQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLK 234
           + GGHLVIKLLESED+Q+F+R+ KP+F KASWLRPKATR SSREIYLICQ  +
Sbjct: 181 RHGGHLVIKLLESEDAQDFARICKPIFNKASWLRPKATRPSSREIYLICQGFR 224

[Close]

BLAST of CcUC09G182570 vs. TAIR 10
Match: AT4G25730.1 (FtsJ-like methyltransferase family protein )

HSP 1 Score: 82.8 bits (203), Expect = 4.0e-16
Identity = 66/223 (29.60%), Postives = 105/223 (47.09%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLRNG 67
           D +YR A+  G+ +R+++KLLQ+  ++ L+ S  +VLDL  APG W+QVA + + P+  G
Sbjct: 11  DKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKV-PV--G 70

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKE--KGFSVILSDMCPLV 127
             VLGID+  + +P   C +  Q +        K+K+K +  +     F+++L D  P V
Sbjct: 71  SLVLGIDLVPI-LPVRGCVTMTQDITRTEC---KSKIKQVMEQHGVSAFNLVLHDGSPNV 130

Query: 128 SGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLQQGGH 187
            G   ++A     L + +V LA                                L + G+
Sbjct: 131 GGAWAQEAMSQNALVIDSVRLA-----------------------------TEFLARNGN 190

Query: 188 LVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLI 229
           LV K+  S D       L  LF K    +P A+RS+S E YL+
Sbjct: 191 LVTKVFRSRDYNSVLYCLGRLFEKVEVFKPPASRSASAETYLV 197

[Close]

BLAST of CcUC09G182570 vs. TAIR 10
Match: AT5G01230.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 7.9e-12
Identity = 55/233 (23.61%), Postives = 102/233 (43.78%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLG-PLRN 67
           D +YR+A+  G+ ARSAFKLLQI  +F +      V+DL  APG+W QV  + L  P ++
Sbjct: 10  DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLYLPAKS 69

Query: 68  GGS--------VLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVIL 127
                      ++ ID++    P    +  +Q V  D+ N    ++           +++
Sbjct: 70  SAESKDGDLPLIVAIDLQ----PMAPIEGVIQ-VQGDITNARTAEVVIRHFDGCKADLVV 129

Query: 128 SDMCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDG 187
            D  P V+G+   D  +  +L +  + +                                
Sbjct: 130 CDGAPDVTGLHDMDEFVQSQLILAGLTIV-----------------------------TH 189

Query: 188 VLQQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS 232
           +L++GG  + K+   +D+      LK  F   ++ +PK++R+SS E + +C++
Sbjct: 190 ILKEGGKFIAKIFRGKDTSLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCEN 208

[Close]

BLAST of CcUC09G182570 vs. TAIR 10
Match: AT5G01230.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 7.7e-07
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 8  DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQ 56
          D +YR+A+  G+ ARSAFKLLQI  +F +      V+DL  APG+W Q
Sbjct: 10 DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQ 57

The following BLAST results are available for this feature:

BLAST of CcUC09G182570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889598.1	1.7e-120	95.34	ribosomal RNA large subunit methyltransferase E isoform X1 [Benincasa hispida]	[more]
XP_008458862.1	5.9e-118	92.44	PREDICTED: ribosomal RNA large subunit methyltransferase E isoform X3 [Cucumis m...	[more]
XP_004142767.1	7.7e-118	93.28	uncharacterized protein LOC101216412 isoform X2 [Cucumis sativus] >KGN51324.1 hy...	[more]
KAG6602386.1	3.0e-114	90.34	hypothetical protein SDJN03_07619, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960605.1	3.9e-114	90.76	uncharacterized protein LOC111461336 [Cucurbita moschata]	[more]

BLAST of CcUC09G182570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8ZT18	1.5e-23	32.34	Ribosomal RNA large subunit methyltransferase E OS=Desulfococcus oleovorans (str...	[more]
B8FL12	1.3e-22	33.19	Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum aliphaticiv...	[more]
B9LSX2	1.4e-21	30.22	Ribosomal RNA large subunit methyltransferase E OS=Halorubrum lacusprofundi (str...	[more]
Q58771	7.0e-21	30.36	Ribosomal RNA large subunit methyltransferase E OS=Methanocaldococcus jannaschii...	[more]
O28228	2.6e-20	31.84	Ribosomal RNA large subunit methyltransferase E OS=Archaeoglobus fulgidus (strai...	[more]

BLAST of CcUC09G182570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9F1	2.8e-118	92.44	ribosomal RNA large subunit methyltransferase E isoform X3 OS=Cucumis melo OX=36...	[more]
A0A0A0KQZ0	3.7e-118	93.28	FtsJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517710 PE=3 S...	[more]
A0A6J1H9J8	1.9e-114	90.76	uncharacterized protein LOC111461336 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A1S3C8U8	2.5e-114	84.29	ribosomal RNA large subunit methyltransferase E isoform X1 OS=Cucumis melo OX=36...	[more]
A0A6J1JHT1	4.0e-112	89.54	uncharacterized protein LOC111487116 OS=Cucurbita maxima OX=3661 GN=LOC111487116...	[more]

BLAST of CcUC09G182570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13830.1	6.8e-88	70.82	FtsJ-like methyltransferase family protein	[more]
AT4G25730.1	4.0e-16	29.60	FtsJ-like methyltransferase family protein	[more]
AT5G01230.1	7.9e-12	23.61	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT5G01230.2	7.7e-07	50.00	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 15..236 e-value: 4.4E-51 score: 175.3
None	No IPR available	PANTHER	PTHR10920:SF18	RRNA METHYLTRANSFERASE 2, MITOCHONDRIAL	coord: 5..234
None	No IPR available	PANTHER	PTHR10920	RIBOSOMAL RNA METHYLTRANSFERASE	coord: 5..234
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 43..122 e-value: 0.00730184 score: 33.1723
IPR002877	Ribosomal RNA methyltransferase FtsJ domain	PFAM	PF01728	FtsJ	coord: 19..230 e-value: 1.6E-44 score: 152.1
IPR015507	Ribosomal RNA large subunit methyltransferase E	PIRSF	PIRSF005461	23S_rRNA_mtase	coord: 166..236 e-value: 1.5E-11 score: 42.1 coord: 3..161 e-value: 1.6E-35 score: 120.5
IPR015507	Ribosomal RNA large subunit methyltransferase E	HAMAP	MF_01547	RNA_methyltr_E	coord: 3..233 score: 28.674076
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 8..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G182570.1	CcUC09G182570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0032259	methylation
biological_process	GO:0001510	RNA methylation
molecular_function	GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity