CcUC09G182510 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGGGAAGGTCGCCAACATGGCATGGTAAGAACCTGTCGGATCATCCCTTCCCCATGGAATCCAAGACCCGAAACCCGATTCGTTAACCAGCTTGATTTCCCTCCTACTGCTGGCCTTTTCACAAAGGTCTCATCCAAGCCTACCAACCACTCTAAGTTCACCGGAAAATGCGGCAAGCCTCGATGTTCTGGCTGCAGGCTACACCCGGTTCAAAAGGCCAAGGATAAAACCAAGGGATCTCATAAGTTCAAGTCACACCATCTCCTCATTGACTGCTCACTGGATGCCTTCGCTGGACGCCCTGGTTTCATCGACGATGATGGGGATGATCAGTTATTGGAAGAAATAGATATTGAATTGAGGGTTGGAGATATTCATCGCCACGATGACGGTGATAATCAGCCACAGAGAGTAACAGATTTTGAATTGAAGGTCGAAGATATTCATCATCAAGTGGATGATGAAGATGAAATGAGTTACTACGGAGTTGAGTTCGTCGTGGACGAAACCATAGAGGGAGATGATGGTTGGTGTTTGATAGAAGAAAGACAAACAATCTAA ATGAAGAGGGAAGGTCGCCAACATGGCATGGTAAGAACCTGTCGGATCATCCCTTCCCCATGGAATCCAAGACCCGAAACCCGATTCGTTAACCAGCTTGATTTCCCTCCTACTGCTGGCCTTTTCACAAAGGTCTCATCCAAGCCTACCAACCACTCTAAGTTCACCGGAAAATGCGGCAAGCCTCGATGTTCTGGCTGCAGGCTACACCCGGTTCAAAAGGCCAAGGATAAAACCAAGGGATCTCATAAGTTCAAGTCACACCATCTCCTCATTGACTGCTCACTGGATGCCTTCGCTGGACGCCCTGGTTTCATCGACGATGATGGGGATGATCAGTTATTGGAAGAAATAGATATTGAATTGAGGGTTGGAGATATTCATCGCCACGATGACGGTGATAATCAGCCACAGAGAGTAACAGATTTTGAATTGAAGGTCGAAGATATTCATCATCAAGTGGATGATGAAGATGAAATGAGTTACTACGGAGTTGAGTTCGTCGTGGACGAAACCATAGAGGGAGATGATGGTTGGTGTTTGATAGAAGAAAGACAAACAATCTAA ATGAAGAGGGAAGGTCGCCAACATGGCATGGTAAGAACCTGTCGGATCATCCCTTCCCCATGGAATCCAAGACCCGAAACCCGATTCGTTAACCAGCTTGATTTCCCTCCTACTGCTGGCCTTTTCACAAAGGTCTCATCCAAGCCTACCAACCACTCTAAGTTCACCGGAAAATGCGGCAAGCCTCGATGTTCTGGCTGCAGGCTACACCCGGTTCAAAAGGCCAAGGATAAAACCAAGGGATCTCATAAGTTCAAGTCACACCATCTCCTCATTGACTGCTCACTGGATGCCTTCGCTGGACGCCCTGGTTTCATCGACGATGATGGGGATGATCAGTTATTGGAAGAAATAGATATTGAATTGAGGGTTGGAGATATTCATCGCCACGATGACGGTGATAATCAGCCACAGAGAGTAACAGATTTTGAATTGAAGGTCGAAGATATTCATCATCAAGTGGATGATGAAGATGAAATGAGTTACTACGGAGTTGAGTTCGTCGTGGACGAAACCATAGAGGGAGATGATGGTTGGTGTTTGATAGAAGAAAGACAAACAATCTAA MKREGRQHGMVRTCRIIPSPWNPRPETRFVNQLDFPPTAGLFTKVSSKPTNHSKFTGKCGKPRCSGCRLHPVQKAKDKTKGSHKFKSHHLLIDCSLDAFAGRPGFIDDDGDDQLLEEIDIELRVGDIHRHDDGDNQPQRVTDFELKVEDIHHQVDDEDEMSYYGVEFVVDETIEGDDGWCLIEERQTI Homology
BLAST of CcUC09G182510 vs. NCBI nr
Match: KAA0037631.1 (putative Calcium-binding site [Cucumis melo var. makuwa] >TYK22778.1 putative Calcium-binding site [Cucumis melo var. makuwa]) HSP 1 Score: 323.9 bits (829), Expect = 8.9e-85 Identity = 154/188 (81.91%), Postives = 164/188 (87.23%), Query Frame = 0
BLAST of CcUC09G182510 vs. NCBI nr
Match: XP_008458858.1 (PREDICTED: uncharacterized protein LOC103498137 [Cucumis melo]) HSP 1 Score: 323.6 bits (828), Expect = 1.2e-84 Identity = 154/188 (81.91%), Postives = 163/188 (86.70%), Query Frame = 0
BLAST of CcUC09G182510 vs. NCBI nr
Match: XP_038890912.1 (uncharacterized protein LOC120080342 [Benincasa hispida]) HSP 1 Score: 318.5 bits (815), Expect = 3.7e-83 Identity = 157/189 (83.07%), Postives = 164/189 (86.77%), Query Frame = 0
BLAST of CcUC09G182510 vs. NCBI nr
Match: XP_011655376.1 (uncharacterized protein LOC105435520 [Cucumis sativus] >KGN51328.1 hypothetical protein Csa_008960 [Cucumis sativus]) HSP 1 Score: 316.2 bits (809), Expect = 1.9e-82 Identity = 151/189 (79.89%), Postives = 163/189 (86.24%), Query Frame = 0
BLAST of CcUC09G182510 vs. NCBI nr
Match: XP_022134475.1 (uncharacterized protein LOC111006711 [Momordica charantia]) HSP 1 Score: 264.6 bits (675), Expect = 6.4e-67 Identity = 134/190 (70.53%), Postives = 142/190 (74.74%), Query Frame = 0
BLAST of CcUC09G182510 vs. ExPASy TrEMBL
Match: A0A5A7T7S1 (Putative Calcium-binding site OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00150 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 4.3e-85 Identity = 154/188 (81.91%), Postives = 164/188 (87.23%), Query Frame = 0
BLAST of CcUC09G182510 vs. ExPASy TrEMBL
Match: A0A1S3CA33 (uncharacterized protein LOC103498137 OS=Cucumis melo OX=3656 GN=LOC103498137 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 5.6e-85 Identity = 154/188 (81.91%), Postives = 163/188 (86.70%), Query Frame = 0
BLAST of CcUC09G182510 vs. ExPASy TrEMBL
Match: A0A0A0KNY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517750 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 9.0e-83 Identity = 151/189 (79.89%), Postives = 163/189 (86.24%), Query Frame = 0
BLAST of CcUC09G182510 vs. ExPASy TrEMBL
Match: A0A6J1BYE3 (uncharacterized protein LOC111006711 OS=Momordica charantia OX=3673 GN=LOC111006711 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 3.1e-67 Identity = 134/190 (70.53%), Postives = 142/190 (74.74%), Query Frame = 0
BLAST of CcUC09G182510 vs. ExPASy TrEMBL
Match: A0A6J1GUS5 (uncharacterized protein LOC111457115 OS=Cucurbita moschata OX=3662 GN=LOC111457115 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 3.1e-67 Identity = 134/189 (70.90%), Postives = 144/189 (76.19%), Query Frame = 0
BLAST of CcUC09G182510 vs. TAIR 10
Match: AT5G40690.1 (CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 142.5 bits (358), Expect = 3.4e-34 Identity = 89/216 (41.20%), Postives = 119/216 (55.09%), Query Frame = 0
BLAST of CcUC09G182510 vs. TAIR 10
Match: AT2G41730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24640.1); Has 25 Blast hits to 25 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-14 Identity = 44/101 (43.56%), Postives = 56/101 (55.45%), Query Frame = 0
BLAST of CcUC09G182510 vs. TAIR 10
Match: AT5G24640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 9.7e-13 Identity = 44/117 (37.61%), Postives = 56/117 (47.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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