CcUC09G181390 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTTTCTACGTTCCCGGTTCTTTCTTCATTGAGCGCCAGTGTTAATATCTCTTCGGATCTTAGCTCGTTTTCGCTGAATATTCCACTCGTCAATATCTGTTCCAAACCGAGCACTCAACCTTCGCCTTCTATTATCGTTTGCTCTTACAGTGAGTTCCTGCATTTTGTTGTATCCATTATTTTGCTGTAATTGAACTTTTAATTATGCGTTGGTTTTAGAATCTGGCAATAATACGGTGACGGAGCGGAAGAAAAAGTTGTTGGAACAATATGGACTTGATCCTAACGAGTTTTTGTCTGAACCTTCCATTAATGTTGGTTCTCCCTCTCTCTGATGGTTGTTTATCTATAATTTCTTTTCAAGCCCGAATAGTTTGGAGACGAGTGACTGATATTGTTCATTTTTATCGTTAATTTGCCTTATAGCGAAAAAGAGAAACGCGAAAATCGGGTAAAGGCAAGCAGATTTCAGCTGAGGATCCTAAACCTCAGCGGCAGACCCATAAGTTACTTCAGGTACGAGTTGTGTTACTTTTTCCATTTTGTTTGGTGCTTTGCGCTGTGATAATTCAATTCAGTCTACCCTCGGAAGTGAAAGTGACAATCATTCGCTGGCCTAACTGGGCGCTACTATCCACTATATATCTTCCAAAGTAGAGAAGGCATCCTTCATAGGGGATATCGCTCTCTGCCATAGAGATTACTCCTTCAAATTCCGAAATAAAGTGAAAGGGGAGAGAAATGCTTGTGTAATTTGATATTTAAGGTCTTTTGGTAATGAACTTTTCTTACACGGTGGTTGAACAAATGCTTTATTTGGATTAAAGACATTCCCTCTTAAATATCAATTTACACAAATTGAAAGGTATAGATAATCCAGATCAATACATAGTAACTACCTGCCTAGATTTAATATCTTACGACCAAATGTTGTAAGGTCGGATGTGTTGTCTCGTTATATTAGTGGAGGTGTCCATAAGCTGGGCCTCTCGAACATTGGGAAAAAAAAAATGAAAGCTGTAGTATTAGTTTAATTCTGTAAGTTGATGGAATAATTTCATTTTGGATTTATTCTAGTCACATCTACACCAAGTTAATCATTTTCAATTGGCCAATTTGCCACACTTAAAAATTTTAGTCTAGAGAGAATATTGCGCTGGTTGGTAGAATTTATCACGTTAATGATACCATCCTCCAATGCCTACACATCACGTGTACCACACATATATCGGAATTATATTCATAAGGTTCCTTGTTTTTCTTTCAAGAACAACTCAATCAATATGTTGGCTACCTTAGGTGCTTGGAGGAAGTGCTCGGAGAATGAAGCTACTCTCACCAAAGGGCTTGGATGTACGCCCAATGATGGAAGTTGTGAAAGGTGCAGCTTTTGATATTTTGCAGGTTGGAGTTGTAGTTTAAATATTAGTTTCTTTAATGTTACCAGATCATTCAGCTAGCTTATCAAATGATTTAGGTTTGTAGATTTCTAGTTCAAGAGCTCGTATGGTAGTATAATATTTTATATAGTCGTACTTTTCTTGGGTAGGTTGCTGCTAGCCATCCTCTCACCTAAAAAAAAGTGTAATGTAATTTGAAAATGCAGGCTGCTGGTGGCTGTCCAGCATCTTTAAGGCCTGGTCGTTGGTTAGACTTGTATAGTGGTACCGGATCAGTTGGTATTGAAGCTATGAGCCGTGGATGTTCTGAGGTACCAGTTCAATTGAGAATTTAGCGTGGGATAACATTTTCCATAATTTTTTAAAAGCAACTAATTGATTAAGCAGCTTTTGAACTAACTATGTTTAGACAGGATTGGCTTGATATACAAAATTGTCAATTTCATGATATTTATTCTCTATATCTCTTTTCTTTTTCATATACTATCTGCTCCTTCAACTTCCAGGTGCATTTTGTTGAGATGGATCCATGGGTTGTTTCTGATGTTCTAAGGCCAAATCTGGAATCTACTGGATTTTTTGATGATTCAGTCATTCACACAATTCAGGTCGAGAATTTTATAGAACGAGCTGAGCAACTTATTGGTACCCCATCTAAACTTTAGTTTTCTCCTTGTTTCTCCTTGTTTCTTGTTTCATCCAAAGACTTATGGGCACAAACATGGACATGAGGTACATTGTTTCTAGCAAACTAAGGGTTAGTTTGTGATTGTTGTAGCTTTTAAAATATTTGTTGGCAATTGTGATTTGTGAGACAAATCAACTCTTCCATGAAGTAATTTAATGTTTGCAAAATATCAATTAAAACACTTGAAAAAACATCTTACCGTTTTTGGTAAATTAACGTTAAATTGTTTTGATTTAGCTATCATGACCAAATTAGACATATTATTTTAATCATTTTTATATTGATTCTTAATATCTAATGTATTATAAGACAAAAATGTAAAAATTTATATGATTTAAATTGCGAGTAATATTGTTTAATTTAAATTATTTGATAAATTCTAAGAAAAACAATTGTTCTAAAAAATTGAAGCAATCAAATTTTGTTGATTCTGAAGGCATAGATTTGAAAAGAAAAATGATGTATGGAAGCGTAGAATTGAAATTTTTAAATTTGTTAGAGAAGATAGAAAACTTTTTGGAAAGCTGATTTCTAAGGCTACCATCTATGTGATTTAGTAGCTAGAGTAAATTGAGAAATAATTTTGGATAAATTATTAGATAATCAATTTTACCAAACAACTGAGACAGTTAAACTTGCATTAACTGTAAATGAAAATGGTAAATGTAAATGGTCTACGCTTGTCTCACCTTGGTAGGAATAAAGAATCAGTAAAATCAAACAAATTCTCATTTTTGTTTAAGAATAATAAATGGTAGTGAAGTCAAATTCTTATGTTATAGTTCAATTGAATGATTAAGCTTCTATAATTTATGATTTTAAGGCTACCAATTATTGTTTCAAGTATATTGTCTTGTCTAGGTAATGACAGACCATTTGATTATATTAGTGTTACCCCACCGTACACACAAGTTGATTATGGGGTACTCATGGGGCAATTATCAAAGTCATCCTTAGTTGGAGAAGATACCTTCATTGTAAGTTGTATTTTTCTTGTTCTTATTTAAAAAGTCAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCAGAAAAATCAGAAAGTTTTATGAAACCGTGTGCTATGGTTCAAATCCATAGTCAATCCTATATTTATTTACATATGGTTTACCTTCCTTTCTCTCACTTTGATCTTTGTGATCTAGGTGGTTGAATATCCATTAAGGACTGACATGCTAGATTCCTGCGGATGCCTTATTAAGGTAATTTAATCATGCAGGTATTTTACATTATTAATGTTATGAATGAATAAAATCATCAGTAGGACAAGATTGTATTTCATCTGAAATTTGTTTAGCCTGATGGAATTTCGCGAGAAGGTATGGGTATGAATACTGGGCAACTATATCTTTTGTAATAGGGGGTCCAGTTAAATGTAGTCTGTAATGTAACCAACACCCTGAGTACTTTCTCAAAAATATATATACAAGAAGAGATCAGAGGTCTGATATCTTACAAATTTCTGCATTTTTTTTAATGTCACACTGGATCATCATTTAAAGAGAATTATTTAGGGTTTTACTCATAATGTCTTTCCCTATTGAGTAACAAATATAATTGTATCTAATTGCAGATTACTGACCGACGGTTTGGTCGGACACACTTGGCAATTTATGGACCCACATGGGCTGAGAAGAAAAAGAAGGAAAAAAATTAA ATGGCGGTTTCTACGTTCCCGGTTCTTTCTTCATTGAGCGCCAGTGTTAATATCTCTTCGGATCTTAGCTCGTTTTCGCTGAATATTCCACTCGTCAATATCTGTTCCAAACCGAGCACTCAACCTTCGCCTTCTATTATCGTTTGCTCTTACAAATCTGGCAATAATACGGTGACGGAGCGGAAGAAAAAGTTGTTGGAACAATATGGACTTGATCCTAACGAGTTTTTGTCTGAACCTTCCATTAATCGAAAAAGAGAAACGCGAAAATCGGGTAAAGGCAAGCAGATTTCAGCTGAGGATCCTAAACCTCAGCGGCAGACCCATAAGTTACTTCAGGTGCTTGGAGGAAGTGCTCGGAGAATGAAGCTACTCTCACCAAAGGGCTTGGATGTACGCCCAATGATGGAAGTTGTGAAAGGTGCAGCTTTTGATATTTTGCAGGCTGCTGGTGGCTGTCCAGCATCTTTAAGGCCTGGTCGTTGGTTAGACTTGTATAGTGGTACCGGATCAGTTGGTATTGAAGCTATGAGCCGTGGATGTTCTGAGGTGCATTTTGTTGAGATGGATCCATGGGTTGTTTCTGATGTTCTAAGGCCAAATCTGGAATCTACTGGATTTTTTGATGATTCAGTCATTCACACAATTCAGGTCGAGAATTTTATAGAACGAGCTGAGCAACTTATTGGTAATGACAGACCATTTGATTATATTAGTGTTACCCCACCGTACACACAAGTTGATTATGGGGTACTCATGGGGCAATTATCAAAGTCATCCTTAGTTGGAGAAGATACCTTCATTGTGGTTGAATATCCATTAAGGACTGACATGCTAGATTCCTGCGGATGCCTTATTAAGATTACTGACCGACGGTTTGGTCGGACACACTTGGCAATTTATGGACCCACATGGGCTGAGAAGAAAAAGAAGGAAAAAAATTAA ATGGCGGTTTCTACGTTCCCGGTTCTTTCTTCATTGAGCGCCAGTGTTAATATCTCTTCGGATCTTAGCTCGTTTTCGCTGAATATTCCACTCGTCAATATCTGTTCCAAACCGAGCACTCAACCTTCGCCTTCTATTATCGTTTGCTCTTACAAATCTGGCAATAATACGGTGACGGAGCGGAAGAAAAAGTTGTTGGAACAATATGGACTTGATCCTAACGAGTTTTTGTCTGAACCTTCCATTAATCGAAAAAGAGAAACGCGAAAATCGGGTAAAGGCAAGCAGATTTCAGCTGAGGATCCTAAACCTCAGCGGCAGACCCATAAGTTACTTCAGGTGCTTGGAGGAAGTGCTCGGAGAATGAAGCTACTCTCACCAAAGGGCTTGGATGTACGCCCAATGATGGAAGTTGTGAAAGGTGCAGCTTTTGATATTTTGCAGGCTGCTGGTGGCTGTCCAGCATCTTTAAGGCCTGGTCGTTGGTTAGACTTGTATAGTGGTACCGGATCAGTTGGTATTGAAGCTATGAGCCGTGGATGTTCTGAGGTGCATTTTGTTGAGATGGATCCATGGGTTGTTTCTGATGTTCTAAGGCCAAATCTGGAATCTACTGGATTTTTTGATGATTCAGTCATTCACACAATTCAGGTCGAGAATTTTATAGAACGAGCTGAGCAACTTATTGGTAATGACAGACCATTTGATTATATTAGTGTTACCCCACCGTACACACAAGTTGATTATGGGGTACTCATGGGGCAATTATCAAAGTCATCCTTAGTTGGAGAAGATACCTTCATTGTGGTTGAATATCCATTAAGGACTGACATGCTAGATTCCTGCGGATGCCTTATTAAGATTACTGACCGACGGTTTGGTCGGACACACTTGGCAATTTATGGACCCACATGGGCTGAGAAGAAAAAGAAGGAAAAAAATTAA MAVSTFPVLSSLSASVNISSDLSSFSLNIPLVNICSKPSTQPSPSIIVCSYKSGNNTVTERKKKLLEQYGLDPNEFLSEPSINRKRETRKSGKGKQISAEDPKPQRQTHKLLQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDDSVIHTIQVENFIERAEQLIGNDRPFDYISVTPPYTQVDYGVLMGQLSKSSLVGEDTFIVVEYPLRTDMLDSCGCLIKITDRRFGRTHLAIYGPTWAEKKKKEKN Homology
BLAST of CcUC09G181390 vs. NCBI nr
Match: XP_038890433.1 (putative rRNA methyltransferase YlbH [Benincasa hispida]) HSP 1 Score: 589.0 bits (1517), Expect = 2.5e-164 Identity = 293/313 (93.61%), Postives = 305/313 (97.44%), Query Frame = 0
BLAST of CcUC09G181390 vs. NCBI nr
Match: XP_004148680.1 (uncharacterized protein LOC101209883 [Cucumis sativus] >XP_031741881.1 uncharacterized protein LOC101209883 [Cucumis sativus] >KGN52426.1 hypothetical protein Csa_007850 [Cucumis sativus]) HSP 1 Score: 568.2 bits (1463), Expect = 4.5e-158 Identity = 286/313 (91.37%), Postives = 297/313 (94.89%), Query Frame = 0
BLAST of CcUC09G181390 vs. NCBI nr
Match: XP_008458705.1 (PREDICTED: putative rRNA methyltransferase YlbH [Cucumis melo] >KAA0037420.1 putative rRNA methyltransferase YlbH [Cucumis melo var. makuwa] >TYK00211.1 putative rRNA methyltransferase YlbH [Cucumis melo var. makuwa]) HSP 1 Score: 563.5 bits (1451), Expect = 1.1e-156 Identity = 284/314 (90.45%), Postives = 297/314 (94.59%), Query Frame = 0
BLAST of CcUC09G181390 vs. NCBI nr
Match: XP_022133703.1 (uncharacterized protein LOC111006220 [Momordica charantia]) HSP 1 Score: 550.8 bits (1418), Expect = 7.5e-153 Identity = 275/313 (87.86%), Postives = 292/313 (93.29%), Query Frame = 0
BLAST of CcUC09G181390 vs. NCBI nr
Match: XP_022993553.1 (uncharacterized protein LOC111489523 isoform X1 [Cucurbita maxima] >XP_022993554.1 uncharacterized protein LOC111489523 isoform X1 [Cucurbita maxima]) HSP 1 Score: 530.8 bits (1366), Expect = 8.0e-147 Identity = 272/316 (86.08%), Postives = 289/316 (91.46%), Query Frame = 0
BLAST of CcUC09G181390 vs. ExPASy Swiss-Prot
Match: O34331 (Putative rRNA methyltransferase YlbH OS=Bacillus subtilis (strain 168) OX=224308 GN=ylbH PE=3 SV=2) HSP 1 Score: 80.9 bits (198), Expect = 2.9e-14 Identity = 51/190 (26.84%), Postives = 92/190 (48.42%), Query Frame = 0
BLAST of CcUC09G181390 vs. ExPASy Swiss-Prot
Match: P0ADY0 (Ribosomal RNA small subunit methyltransferase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=rsmD PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 5.4e-05 Identity = 39/169 (23.08%), Postives = 75/169 (44.38%), Query Frame = 0
BLAST of CcUC09G181390 vs. ExPASy Swiss-Prot
Match: P0ADX9 (Ribosomal RNA small subunit methyltransferase D OS=Escherichia coli (strain K12) OX=83333 GN=rsmD PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 5.4e-05 Identity = 39/169 (23.08%), Postives = 75/169 (44.38%), Query Frame = 0
BLAST of CcUC09G181390 vs. ExPASy Swiss-Prot
Match: P57136 (Ribosomal RNA small subunit methyltransferase D OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=rsmD PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 7.1e-05 Identity = 33/160 (20.62%), Postives = 76/160 (47.50%), Query Frame = 0
BLAST of CcUC09G181390 vs. ExPASy Swiss-Prot
Match: Q9ZD05 (Uncharacterized methylase RP545 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=RP545 PE=4 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 7.1e-05 Identity = 49/229 (21.40%), Postives = 93/229 (40.61%), Query Frame = 0
BLAST of CcUC09G181390 vs. ExPASy TrEMBL
Match: A0A0A0KX89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633240 PE=4 SV=1) HSP 1 Score: 568.2 bits (1463), Expect = 2.2e-158 Identity = 286/313 (91.37%), Postives = 297/313 (94.89%), Query Frame = 0
BLAST of CcUC09G181390 vs. ExPASy TrEMBL
Match: A0A5D3BK68 (Putative rRNA methyltransferase YlbH OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1582G00020 PE=4 SV=1) HSP 1 Score: 563.5 bits (1451), Expect = 5.4e-157 Identity = 284/314 (90.45%), Postives = 297/314 (94.59%), Query Frame = 0
BLAST of CcUC09G181390 vs. ExPASy TrEMBL
Match: A0A1S3C8K7 (putative rRNA methyltransferase YlbH OS=Cucumis melo OX=3656 GN=LOC103498032 PE=4 SV=1) HSP 1 Score: 563.5 bits (1451), Expect = 5.4e-157 Identity = 284/314 (90.45%), Postives = 297/314 (94.59%), Query Frame = 0
BLAST of CcUC09G181390 vs. ExPASy TrEMBL
Match: A0A6J1BZW0 (uncharacterized protein LOC111006220 OS=Momordica charantia OX=3673 GN=LOC111006220 PE=4 SV=1) HSP 1 Score: 550.8 bits (1418), Expect = 3.6e-153 Identity = 275/313 (87.86%), Postives = 292/313 (93.29%), Query Frame = 0
BLAST of CcUC09G181390 vs. ExPASy TrEMBL
Match: A0A6J1K2L1 (uncharacterized protein LOC111489523 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489523 PE=4 SV=1) HSP 1 Score: 530.8 bits (1366), Expect = 3.9e-147 Identity = 272/316 (86.08%), Postives = 289/316 (91.46%), Query Frame = 0
BLAST of CcUC09G181390 vs. TAIR 10
Match: AT3G28460.1 (methyltransferases ) HSP 1 Score: 363.2 bits (931), Expect = 2.1e-100 Identity = 189/305 (61.97%), Postives = 231/305 (75.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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