CcUC09G179550 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G179550
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	DNA double-strand break repair Rad50 ATPase
Location	CicolChr09: 29785961 .. 29789721 (-)
RNA-Seq Expression	CcUC09G179550
Synteny	CcUC09G179550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTGAGCAGCAACCGAAGCGCCCGTCAGTTGGTCCTACGGCGGTCTCCTGCCTTCCATCGCTGGCCAATCTCCCGTCTCCGCCGGTTGTAGAAACACCGGCGAGTGGGTTTCTTTTTTCTCTCTCTCCCTCGGTTACTGCTTGCAGCCGCTACCACGCCACCGCCCTTGCACGTCTCCGGTCACAATCGCCGCCGGTTCAAGTGTTGTGCAGTGTGTGAGGTTTTGGGCTCCTTCGAGTTTTCTTAATTGGTCTTGAATACCTTTAAGTTCTTGGCCTAAAATTTATTTTCCCATGATGCTTTTGTCTTAGAAAGTTGAGTCGATTCGTTGGACTTTATGAAATTAGTTGATATTCAAACCCAAATGTAAGGTGGAATGCTGAGAATACATCTAAAGAATTAAATAAATCCTAACTTAATAACTTAAAACTTCTGGATTTAGAGTGATTTAACATCTCTACATTAATTCTCTTGCAGAATTGAAATGGAAAAAAAAATTGATCACGAGTCAAACGAGAAGATTCTTGAGATTTTTAAAGAGTTCATGGCTAGGTAATTTTAGCTCCATTTTTTCACTTAGTTAACACTGAAGGAAGAGTCTATTGCCATTTTCTGAATTGCTTTTAAAGACTTTTCAGGAAAGAAAATTTTCAACTCTCTACTCATTGGTATATGGTATATTGGCTGGTTTAGAAAATCTTATCTGTAATCAGTTCATATTACTCAAACTTATGTCATGTTGCTTCACATAATAAGGAAACTCTCGCCCATGACTTAGCTTTGTGCATCCTTTCTCTTATTTTGTTCGACTTGATCGGAATTTTTGGTATCATTAATTTTCTAGTGTTGCAAAGCTTGAGGAATTGGGGACTTCAGGGAACCAGTTGCTTTCTGGCATTCAGCAAGGACTTGGTTTGTGTCCTGCATCTGAAATAATACTTGTCATGCTTCTACTGCTTGAATGAATTGGTGTTGTGTAGTGATTTTTTAACCCTTGCAGAGCTTCTTCGACGACCTCCGATAAACAGAACATCGAAGTTGATTGAGAATGTCATTGAAACGAACAACACGGAGAATCTTAGATCATACATTGAAGCTGGATGCATCAATACTCATGATGCTGTGCAAAGTACAAAGAAGTGTATGTTTAACTTTAAGTAAGATAGTTTTCTGTTAATTCAATGCTTGTTTTGGTGACATTGTTGTCTTGTGTTCTACAAATAAATGTAAGGGTAGTCTCAATTCTCTTACTTCACATTCCTGTTCTTTTCTATCTCAGAATGTGTTTATTTCAATTAGATACATACTTCGTAACTAACCAATAGCTTAAACAGATAACGTTTGGTCCTTACTTTTCTTTTTATTTGTCATGGATGCATCATTATCTTCCTTATCCATTTTTTTGGTCTAACTACAATTTATTTTTCACATATGTAGTGCATACATGTCGGGTTGGCCTGGATGATCATTTGAGAAAAGGTAAATAAGCAGTCTCTATGAAGGTTTAAGCCGTTTGCTAGTTGTTACATTTTGTAACCATATATGTGTTGTAACGATAATGCCACACATTTGTGCTTGATTTCGATATGCCTTGCATAGCTTTTGTGGAAATTTGTGTCCCTATGTTCTATGGCACATTCTTTTCCTCTTTGCTATTAGCGAGTTTTATTCTCATAGAAAGATATTTCTTGTTCTGCTTCATGTATGATAGTACTTTGGGTACATTATCTTATGTCATATTGATATCTAATTTTTTATGGGAACAAACAGCAAGGCGCCTAATCAATGAACTCGAACGCCTAGTCAATGATGTAAATATTGCACTGGAAACTGAGAATCCCCTGTGCACTTCAACAGTTTCAGATGAAGATTTAGAATTGAATGAAGAAGAAGCAACTGTTCCTAATAAGGCAAACTGCAACTTCCATTTTCTTTATGTTTTCTGTAATGGTCATAATTATATTTCTTTCAATTTTTGTATATTGTTACTTAGATGTTGAAATTGCCCTGTGGTTTACTGTTTAATCAATTTCTGCCTTTTCTTGTTCAGAAACCTGGTGCTAGTGAATATGCTTTATTAATGGGGATCATCAAAGTTATGGTCGGGAAAGACCATAGAATGCAGGTCATCTACCATTTTTGTTATTTGTCCATGTGAACATAACATACTGTCATTTTGCCAACACCCACCTGGCAAAGTGGCACGGTGTTGGAGTTTGATCCTGCACTTTGCAGTTTGTTGTTAATTTAATAGCAATACTATCGTTTTCTTTTCGTTATAACTGTATATTTGGGCCTATGAAACATAGATACTTCATGTGAGGCATAGAACCAGTATCTTACACTTATTAGATAATGATACTCCCCGGTACTTCCTAGATATGTATTTGATACGCGATTTGGCGTATTTGTTCTTTTGTTTTTTGTCATAAATAACAGATATGCATATACCATTCCAGAACTAAGCAGCATACTTAAAAAGTCCATTGCCCCAACCCAAAACTAAAATAAAAGAATAAAAAACTAAACCCTAGAGTCATGTAATCTTCATCCACTCCTGAGTCCCCACAAAATCACGCAAAAAATAACCCACTTGATTATCTTCAACAATTCAACAAAGAAGTTCATTTATCTGCGTACTTCTCTCTTTAATCTTCTTCTTCTCTAGTTGATTTGACTCCAATGCGCCACCAACCTTTTCTATTGTATTTTATTTACTATTGTATTTCAATATCTCTAGTGCTGCCTTTTGTATTGTGATAAGGTCTCAACCACAATTTATTTATCAACATCAGAGGGAGAATTCGAGAGCTCCCTTTTCTCTCCCAGATCTCTTCAAGAGAATATTTACAAGCAAAAAAGATGCCCCTCTTCTCACAACTCAACCGTTTACATACCCTCTCATACATGACCTATAACTAACAAATATTCCTAGGGTCCTCACATTACCTATTTCCTTTACCCGATATTACCCCTCTTCTCTTTATCATGTCTACAAACATACACCTTAGTTATTTTAGGCCTATCATATTGTATTTTAGTATTTGTACTTTTACTGTCATTAACTTGACATTTTATGCGAATTTAATTTAGTATCTTTATGTTCAATTTACAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCCACATATTGAAATTGACATATTTGCATCCTAGTTTTTTAGGAATTGACATATTACCATAACTGTGTGTCTGTGCTTCATAGATTTGAACGCTACTCCTTGCATCTATGATTATCTTTGTTTTGATTTCTTGGTCTTGGAGATAATCAAAAGTGTAACTTGTTGCAGGAGAAGATTGTTTCTGGTTTAGGTCTCAAATCATCCTCAGGGGAACTTGAAACATACCGCCTAATGTGGTCTTTACGACCATATATTGACGATGAAATAATGCATCGGGCTTGGAAGCTTGTTTGATGACTGGTAACAACTTTAACTCTAAATGAATTTGTCTACAGGATATTCATAAGTTGTTGCAGTGAATTAATCAAGCCAAAGTCTGATAGTTGGAGTTGGAGTTTTCTTTTGAATCAATATCATCTCCAGGAGCATCAAAATCTTTAAGTTGAACTGTTTGCTTAATCTGTGAAAATATTTTTTATAGATTAAATGA

mRNA sequence

ATGCCTTGGTCCTACGGCGGTCTCCTGCCTTCCATCGCTGGCCAATCTCCCGTCTCCGCCGGTTGTAGAAACACCGGCGAGTGGGTTTCTTTTTTCTCTCTCTCCCTCGGTTACTGCTTGCAGCCGCTACCACGCCACCGCCCTTGCACGTCTCCGGTCACAATCGCCGCCGGTTCAAGTGTTGTGCAAATTGAAATGGAAAAAAAAATTGATCACGAGTCAAACGAGAAGATTCTTGAGATTTTTAAAGAGTTCATGGCTAGTGTTGCAAAGCTTGAGGAATTGGGGACTTCAGGGAACCAGTTGCTTTCTGGCATTCAGCAAGGACTTGAGCTTCTTCGACGACCTCCGATAAACAGAACATCGAAGTTGATTGAGAATGTCATTGAAACGAACAACACGGAGAATCTTAGATCATACATTGAAGCTGGATGCATCAATACTCATGATGCTGTGCAAACAAGGCGCCTAATCAATGAACTCGAACGCCTAGTCAATGATGTAAATATTGCACTGGAAACTGAGAATCCCCTGTGCACTTCAACAGTTTCAGATGAAGATTTAGAATTGAATGAAGAAGAAGCAACTATGTTGAAATTGCCCTGTGGTTTACTGTTTAATCAATTTCTGCCTTTTCTTGTTCAGAAACCTGGTGCTAGTGAATATGCTTTATTAATGGGGATCATCAAAGTTATGGTCGGGAAAGACCATAGAATGCAGGAGAAGATTGTTTCTGGTTTAGGTCTCAAATCATCCTCAGGGGAACTTGAAACATACCGCCTAATGTGGTCTTTACGACCATATATTGACGATGAAATAATGCATCGGGCTTGGAAGCTTATTAAATGA

Coding sequence (CDS)

ATGCCTTGGTCCTACGGCGGTCTCCTGCCTTCCATCGCTGGCCAATCTCCCGTCTCCGCCGGTTGTAGAAACACCGGCGAGTGGGTTTCTTTTTTCTCTCTCTCCCTCGGTTACTGCTTGCAGCCGCTACCACGCCACCGCCCTTGCACGTCTCCGGTCACAATCGCCGCCGGTTCAAGTGTTGTGCAAATTGAAATGGAAAAAAAAATTGATCACGAGTCAAACGAGAAGATTCTTGAGATTTTTAAAGAGTTCATGGCTAGTGTTGCAAAGCTTGAGGAATTGGGGACTTCAGGGAACCAGTTGCTTTCTGGCATTCAGCAAGGACTTGAGCTTCTTCGACGACCTCCGATAAACAGAACATCGAAGTTGATTGAGAATGTCATTGAAACGAACAACACGGAGAATCTTAGATCATACATTGAAGCTGGATGCATCAATACTCATGATGCTGTGCAAACAAGGCGCCTAATCAATGAACTCGAACGCCTAGTCAATGATGTAAATATTGCACTGGAAACTGAGAATCCCCTGTGCACTTCAACAGTTTCAGATGAAGATTTAGAATTGAATGAAGAAGAAGCAACTATGTTGAAATTGCCCTGTGGTTTACTGTTTAATCAATTTCTGCCTTTTCTTGTTCAGAAACCTGGTGCTAGTGAATATGCTTTATTAATGGGGATCATCAAAGTTATGGTCGGGAAAGACCATAGAATGCAGGAGAAGATTGTTTCTGGTTTAGGTCTCAAATCATCCTCAGGGGAACTTGAAACATACCGCCTAATGTGGTCTTTACGACCATATATTGACGATGAAATAATGCATCGGGCTTGGAAGCTTATTAAATGA

Protein sequence

MPWSYGGLLPSIAGQSPVSAGCRNTGEWVSFFSLSLGYCLQPLPRHRPCTSPVTIAAGSSVVQIEMEKKIDHESNEKILEIFKEFMASVAKLEELGTSGNQLLSGIQQGLELLRRPPINRTSKLIENVIETNNTENLRSYIEAGCINTHDAVQTRRLINELERLVNDVNIALETENPLCTSTVSDEDLELNEEEATMLKLPCGLLFNQFLPFLVQKPGASEYALLMGIIKVMVGKDHRMQEKIVSGLGLKSSSGELETYRLMWSLRPYIDDEIMHRAWKLIK

Homology

[Close]

BLAST of CcUC09G179550 vs. NCBI nr
Match: XP_038887975.1 (uncharacterized protein LOC120077932 isoform X1 [Benincasa hispida] >XP_038887976.1 uncharacterized protein LOC120077932 isoform X1 [Benincasa hispida])

HSP 1 Score: 303.9 bits (777), Expect = 1.4e-78
Identity = 166/233 (71.24%), Postives = 184/233 (78.97%), Query Frame = 0


Query: 67  EKKIDHESNEKILEIFKEFMASVAKLEELGTSGNQLLSGIQQGLELLRRPPINRTSKLIE 126
           E K D +S EKI EIFKEFMASVAKLEELGT G+QLLSGIQQGLELLRRP INRTSKLIE
Sbjct: 3   EVKFDLDSKEKIFEIFKEFMASVAKLEELGTLGSQLLSGIQQGLELLRRPAINRTSKLIE 62

Query: 127 NVIETNNTENLRSYIEAGCINTHDAVQT------------------RRLINELERLVNDV 186
           NVIETNNTE+LRSYIEAGCINTHDAVQ+                  R +I++LERL+NDV
Sbjct: 63  NVIETNNTESLRSYIEAGCINTHDAVQSTKKLHSCRVGLDDHLKKARSIIDKLERLLNDV 122

Query: 187 NIALETENPLCTSTVSDEDLELNEEEATMLKLPCGLLFNQFLPFLVQKPGASEYALLMGI 246
           NIALETENP C+STVSDEDLE NE+EAT+                 +KP A+EYALLMGI
Sbjct: 123 NIALETENPPCSSTVSDEDLEFNEDEATVPN---------------KKPDANEYALLMGI 182

Query: 247 IKVMVGKDHRMQEKIVSGLGLKSSSGELETYRLMWSLRPYIDDEIMHRAWKLI 282
           IKVMV K+HRMQEKI+SGL LKSSSGELETY LMWSL+PYIDDEIMH+AWKL+
Sbjct: 183 IKVMVKKNHRMQEKIISGLSLKSSSGELETYCLMWSLQPYIDDEIMHQAWKLV 220

[Close]

BLAST of CcUC09G179550 vs. NCBI nr
Match: XP_008455091.1 (PREDICTED: uncharacterized protein LOC103495347 isoform X3 [Cucumis melo])

HSP 1 Score: 285.8 bits (730), Expect = 4.0e-73
Identity = 157/233 (67.38%), Postives = 177/233 (75.97%), Query Frame = 0


Query: 67  EKKIDHESNEKILEIFKEFMASVAKLEELGTSGNQLLSGIQQGLELLRRPPINRTSKLIE 126
           E K DHES EKI EIFKEFMASVAKL+ELGT G+QLLSG++QGLELLRRP IN TSKLIE
Sbjct: 3   EVKFDHESKEKIFEIFKEFMASVAKLDELGTQGSQLLSGLKQGLELLRRPSINGTSKLIE 62

Query: 127 NVIETNNTENLRSYIEAGCINTHDAVQT------------------RRLINELERLVNDV 186
           NVIET+NTENLR+YIEAGCINTHD  Q+                  R LI+ELERL NDV
Sbjct: 63  NVIETSNTENLRAYIEAGCINTHDGAQSTKKLHTCRVGLDDHLKKARSLIDELERLHNDV 122

Query: 187 NIALETENPLCTSTVSDEDLELNEEEATMLKLPCGLLFNQFLPFLVQKPGASEYALLMGI 246
           NI LETENPLCTST+SDEDLEL+EEEAT+                 +K  A++YALLMGI
Sbjct: 123 NIELETENPLCTSTMSDEDLELDEEEATVPS---------------KKLDANDYALLMGI 182

Query: 247 IKVMVGKDHRMQEKIVSGLGLKSSSGELETYRLMWSLRPYIDDEIMHRAWKLI 282
           +KVM+ K+H MQEKI+SGL LKSSSGELETY LMWSL+PYIDD IM  AWKL+
Sbjct: 183 VKVMIKKNHIMQEKIISGLSLKSSSGELETYCLMWSLQPYIDDGIMSWAWKLV 220

[Close]

BLAST of CcUC09G179550 vs. NCBI nr
Match: XP_004136915.2 (uncharacterized protein LOC101209598 [Cucumis sativus] >XP_011658847.1 uncharacterized protein LOC101209598 [Cucumis sativus] >KGN43815.1 hypothetical protein Csa_017359 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 6.9e-73
Identity = 155/233 (66.52%), Postives = 177/233 (75.97%), Query Frame = 0


Query: 67  EKKIDHESNEKILEIFKEFMASVAKLEELGTSGNQLLSGIQQGLELLRRPPINRTSKLIE 126
           E + DHES EKI +IFKEFMASVAKL+ELGT G+QLLSG++QGLELLRRP IN TSKLIE
Sbjct: 3   EVQFDHESKEKIFQIFKEFMASVAKLDELGTLGSQLLSGLRQGLELLRRPSINGTSKLIE 62

Query: 127 NVIETNNTENLRSYIEAGCINTHDAVQT------------------RRLINELERLVNDV 186
           NVIE +NTENLRSYIEAGCINTHD  Q+                  R LI+ELERL NDV
Sbjct: 63  NVIEMSNTENLRSYIEAGCINTHDGAQSTKKLHTCRVGLDDHLKKARSLIDELERLHNDV 122

Query: 187 NIALETENPLCTSTVSDEDLELNEEEATMLKLPCGLLFNQFLPFLVQKPGASEYALLMGI 246
           NI LETENPLC ST+SDEDLEL+EEEAT+                 +KP A++YA+LMGI
Sbjct: 123 NIELETENPLCNSTMSDEDLELDEEEATVPS---------------KKPDANDYAVLMGI 182

Query: 247 IKVMVGKDHRMQEKIVSGLGLKSSSGELETYRLMWSLRPYIDDEIMHRAWKLI 282
           +KVM+ K+H MQEKI+SGL LKSSSGELETY LMWSL+PYIDDEIM  AWKL+
Sbjct: 183 VKVMIKKNHIMQEKIISGLSLKSSSGELETYCLMWSLQPYIDDEIMRWAWKLV 220

[Close]

BLAST of CcUC09G179550 vs. NCBI nr
Match: XP_038887977.1 (uncharacterized protein LOC120077932 isoform X2 [Benincasa hispida])

HSP 1 Score: 281.2 bits (718), Expect = 9.9e-72
Identity = 153/214 (71.50%), Postives = 170/214 (79.44%), Query Frame = 0


Query: 86  MASVAKLEELGTSGNQLLSGIQQGLELLRRPPINRTSKLIENVIETNNTENLRSYIEAGC 145
           MASVAKLEELGT G+QLLSGIQQGLELLRRP INRTSKLIENVIETNNTE+LRSYIEAGC
Sbjct: 1   MASVAKLEELGTLGSQLLSGIQQGLELLRRPAINRTSKLIENVIETNNTESLRSYIEAGC 60

Query: 146 INTHDAVQT------------------RRLINELERLVNDVNIALETENPLCTSTVSDED 205
           INTHDAVQ+                  R +I++LERL+NDVNIALETENP C+STVSDED
Sbjct: 61  INTHDAVQSTKKLHSCRVGLDDHLKKARSIIDKLERLLNDVNIALETENPPCSSTVSDED 120

Query: 206 LELNEEEATMLKLPCGLLFNQFLPFLVQKPGASEYALLMGIIKVMVGKDHRMQEKIVSGL 265
           LE NE+EAT+                 +KP A+EYALLMGIIKVMV K+HRMQEKI+SGL
Sbjct: 121 LEFNEDEATVPN---------------KKPDANEYALLMGIIKVMVKKNHRMQEKIISGL 180

Query: 266 GLKSSSGELETYRLMWSLRPYIDDEIMHRAWKLI 282
            LKSSSGELETY LMWSL+PYIDDEIMH+AWKL+
Sbjct: 181 SLKSSSGELETYCLMWSLQPYIDDEIMHQAWKLV 199

[Close]

BLAST of CcUC09G179550 vs. NCBI nr
Match: XP_016901720.1 (PREDICTED: uncharacterized protein LOC103495347 isoform X2 [Cucumis melo])

HSP 1 Score: 279.3 bits (713), Expect = 3.8e-71
Identity = 157/239 (65.69%), Postives = 177/239 (74.06%), Query Frame = 0


Query: 67  EKKIDHESNEKILEIFKEFMASVAKLEELGTSGNQLLSGIQQGL------ELLRRPPINR 126
           E K DHES EKI EIFKEFMASVAKL+ELGT G+QLLSG++QGL      ELLRRP IN 
Sbjct: 3   EVKFDHESKEKIFEIFKEFMASVAKLDELGTQGSQLLSGLKQGLVICTLAELLRRPSING 62

Query: 127 TSKLIENVIETNNTENLRSYIEAGCINTHDAVQT------------------RRLINELE 186
           TSKLIENVIET+NTENLR+YIEAGCINTHD  Q+                  R LI+ELE
Sbjct: 63  TSKLIENVIETSNTENLRAYIEAGCINTHDGAQSTKKLHTCRVGLDDHLKKARSLIDELE 122

Query: 187 RLVNDVNIALETENPLCTSTVSDEDLELNEEEATMLKLPCGLLFNQFLPFLVQKPGASEY 246
           RL NDVNI LETENPLCTST+SDEDLEL+EEEAT+                 +K  A++Y
Sbjct: 123 RLHNDVNIELETENPLCTSTMSDEDLELDEEEATVPS---------------KKLDANDY 182

Query: 247 ALLMGIIKVMVGKDHRMQEKIVSGLGLKSSSGELETYRLMWSLRPYIDDEIMHRAWKLI 282
           ALLMGI+KVM+ K+H MQEKI+SGL LKSSSGELETY LMWSL+PYIDD IM  AWKL+
Sbjct: 183 ALLMGIVKVMIKKNHIMQEKIISGLSLKSSSGELETYCLMWSLQPYIDDGIMSWAWKLV 226

[Close]

BLAST of CcUC09G179550 vs. ExPASy TrEMBL
Match: A0A1S3C0U3 (uncharacterized protein LOC103495347 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495347 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 2.0e-73
Identity = 157/233 (67.38%), Postives = 177/233 (75.97%), Query Frame = 0


Query: 67  EKKIDHESNEKILEIFKEFMASVAKLEELGTSGNQLLSGIQQGLELLRRPPINRTSKLIE 126
           E K DHES EKI EIFKEFMASVAKL+ELGT G+QLLSG++QGLELLRRP IN TSKLIE
Sbjct: 3   EVKFDHESKEKIFEIFKEFMASVAKLDELGTQGSQLLSGLKQGLELLRRPSINGTSKLIE 62

Query: 127 NVIETNNTENLRSYIEAGCINTHDAVQT------------------RRLINELERLVNDV 186
           NVIET+NTENLR+YIEAGCINTHD  Q+                  R LI+ELERL NDV
Sbjct: 63  NVIETSNTENLRAYIEAGCINTHDGAQSTKKLHTCRVGLDDHLKKARSLIDELERLHNDV 122

Query: 187 NIALETENPLCTSTVSDEDLELNEEEATMLKLPCGLLFNQFLPFLVQKPGASEYALLMGI 246
           NI LETENPLCTST+SDEDLEL+EEEAT+                 +K  A++YALLMGI
Sbjct: 123 NIELETENPLCTSTMSDEDLELDEEEATVPS---------------KKLDANDYALLMGI 182

Query: 247 IKVMVGKDHRMQEKIVSGLGLKSSSGELETYRLMWSLRPYIDDEIMHRAWKLI 282
           +KVM+ K+H MQEKI+SGL LKSSSGELETY LMWSL+PYIDD IM  AWKL+
Sbjct: 183 VKVMIKKNHIMQEKIISGLSLKSSSGELETYCLMWSLQPYIDDGIMSWAWKLV 220

[Close]

BLAST of CcUC09G179550 vs. ExPASy TrEMBL
Match: A0A0A0K2B6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G069170 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 3.3e-73
Identity = 155/233 (66.52%), Postives = 177/233 (75.97%), Query Frame = 0


Query: 67  EKKIDHESNEKILEIFKEFMASVAKLEELGTSGNQLLSGIQQGLELLRRPPINRTSKLIE 126
           E + DHES EKI +IFKEFMASVAKL+ELGT G+QLLSG++QGLELLRRP IN TSKLIE
Sbjct: 3   EVQFDHESKEKIFQIFKEFMASVAKLDELGTLGSQLLSGLRQGLELLRRPSINGTSKLIE 62

Query: 127 NVIETNNTENLRSYIEAGCINTHDAVQT------------------RRLINELERLVNDV 186
           NVIE +NTENLRSYIEAGCINTHD  Q+                  R LI+ELERL NDV
Sbjct: 63  NVIEMSNTENLRSYIEAGCINTHDGAQSTKKLHTCRVGLDDHLKKARSLIDELERLHNDV 122

Query: 187 NIALETENPLCTSTVSDEDLELNEEEATMLKLPCGLLFNQFLPFLVQKPGASEYALLMGI 246
           NI LETENPLC ST+SDEDLEL+EEEAT+                 +KP A++YA+LMGI
Sbjct: 123 NIELETENPLCNSTMSDEDLELDEEEATVPS---------------KKPDANDYAVLMGI 182

Query: 247 IKVMVGKDHRMQEKIVSGLGLKSSSGELETYRLMWSLRPYIDDEIMHRAWKLI 282
           +KVM+ K+H MQEKI+SGL LKSSSGELETY LMWSL+PYIDDEIM  AWKL+
Sbjct: 183 VKVMIKKNHIMQEKIISGLSLKSSSGELETYCLMWSLQPYIDDEIMRWAWKLV 220

[Close]

BLAST of CcUC09G179550 vs. ExPASy TrEMBL
Match: A0A1S4E157 (uncharacterized protein LOC103495347 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495347 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.8e-71
Identity = 157/239 (65.69%), Postives = 177/239 (74.06%), Query Frame = 0


Query: 67  EKKIDHESNEKILEIFKEFMASVAKLEELGTSGNQLLSGIQQGL------ELLRRPPINR 126
           E K DHES EKI EIFKEFMASVAKL+ELGT G+QLLSG++QGL      ELLRRP IN 
Sbjct: 3   EVKFDHESKEKIFEIFKEFMASVAKLDELGTQGSQLLSGLKQGLVICTLAELLRRPSING 62

Query: 127 TSKLIENVIETNNTENLRSYIEAGCINTHDAVQT------------------RRLINELE 186
           TSKLIENVIET+NTENLR+YIEAGCINTHD  Q+                  R LI+ELE
Sbjct: 63  TSKLIENVIETSNTENLRAYIEAGCINTHDGAQSTKKLHTCRVGLDDHLKKARSLIDELE 122

Query: 187 RLVNDVNIALETENPLCTSTVSDEDLELNEEEATMLKLPCGLLFNQFLPFLVQKPGASEY 246
           RL NDVNI LETENPLCTST+SDEDLEL+EEEAT+                 +K  A++Y
Sbjct: 123 RLHNDVNIELETENPLCTSTMSDEDLELDEEEATVPS---------------KKLDANDY 182

Query: 247 ALLMGIIKVMVGKDHRMQEKIVSGLGLKSSSGELETYRLMWSLRPYIDDEIMHRAWKLI 282
           ALLMGI+KVM+ K+H MQEKI+SGL LKSSSGELETY LMWSL+PYIDD IM  AWKL+
Sbjct: 183 ALLMGIVKVMIKKNHIMQEKIISGLSLKSSSGELETYCLMWSLQPYIDDGIMSWAWKLV 226

[Close]

BLAST of CcUC09G179550 vs. ExPASy TrEMBL
Match: A0A1S3C033 (uncharacterized protein LOC103495347 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495347 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 6.5e-69
Identity = 157/261 (60.15%), Postives = 177/261 (67.82%), Query Frame = 0


Query: 67  EKKIDHESNEKILEIFKEFMASVAKLEELGTSGNQLLSGIQQGL---------------- 126
           E K DHES EKI EIFKEFMASVAKL+ELGT G+QLLSG++QGL                
Sbjct: 3   EVKFDHESKEKIFEIFKEFMASVAKLDELGTQGSQLLSGLKQGLGLCPASEIILVFASTV 62

Query: 127 ------------ELLRRPPINRTSKLIENVIETNNTENLRSYIEAGCINTHDAVQT---- 186
                       ELLRRP IN TSKLIENVIET+NTENLR+YIEAGCINTHD  Q+    
Sbjct: 63  LMKCCVVICTLAELLRRPSINGTSKLIENVIETSNTENLRAYIEAGCINTHDGAQSTKKL 122

Query: 187 --------------RRLINELERLVNDVNIALETENPLCTSTVSDEDLELNEEEATMLKL 246
                         R LI+ELERL NDVNI LETENPLCTST+SDEDLEL+EEEAT+   
Sbjct: 123 HTCRVGLDDHLKKARSLIDELERLHNDVNIELETENPLCTSTMSDEDLELDEEEATVPS- 182

Query: 247 PCGLLFNQFLPFLVQKPGASEYALLMGIIKVMVGKDHRMQEKIVSGLGLKSSSGELETYR 282
                         +K  A++YALLMGI+KVM+ K+H MQEKI+SGL LKSSSGELETY 
Sbjct: 183 --------------KKLDANDYALLMGIVKVMIKKNHIMQEKIISGLSLKSSSGELETYC 242

[Close]

BLAST of CcUC09G179550 vs. ExPASy TrEMBL
Match: A0A6J1D9B8 (uncharacterized protein LOC111018794 OS=Momordica charantia OX=3673 GN=LOC111018794 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 9.4e-68
Identity = 149/233 (63.95%), Postives = 170/233 (72.96%), Query Frame = 0


Query: 67  EKKIDHESNEKILEIFKEFMASVAKLEELGTSGNQLLSGIQQGLELLRRPPINRTSKLIE 126
           E   DH S EKI +IF+EFMASVAKLEELGT G++ LSG QQGLELLRRP INR+SKLIE
Sbjct: 3   EVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIE 62

Query: 127 NVIETNNTENLRSYIEAGCINTHDAVQT------------------RRLINELERLVNDV 186
           +VIETNNTENL+SY EAGCINTHD VQ+                  R LI+ELE L+N+ 
Sbjct: 63  DVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNA 122

Query: 187 NIALETENPLCTSTVSDEDLELNEEEATMLKLPCGLLFNQFLPFLVQKPGASEYALLMGI 246
           NIALETEN    STVSDED+EL+EEEAT+                 +K  A+EYAL MGI
Sbjct: 123 NIALETENSPRASTVSDEDVELDEEEATVPD---------------EKLDANEYALFMGI 182

Query: 247 IKVMVGKDHRMQEKIVSGLGLKSSSGELETYRLMWSLRPYIDDEIMHRAWKLI 282
           IK MV KD+ MQEKI+SGL LKSSSGELETY +MWSLRPYIDDEI+ RAWKL+
Sbjct: 183 IKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV 220

[Close]

BLAST of CcUC09G179550 vs. TAIR 10
Match: AT3G49645.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 176.0 bits (445), Expect = 4.2e-44
Identity = 105/234 (44.87%), Postives = 140/234 (59.83%), Query Frame = 0


Query: 66  MEKKIDHESNEKILEIFKEFMASVAKLEELGTSGNQLLSGIQQGLELLRRPPINRTSKLI 125
           ME +I  E  +KI EIFK+FM  + +LEELG + N  L   QQGL  L+RPPI  +SKLI
Sbjct: 1   METRI--ELKKKISEIFKDFMTVITQLEELGNAANNFLLRFQQGLSFLQRPPIVTSSKLI 60

Query: 126 ENVIETNNTENLRSYIEAGCINTHDAVQTRR------------------LINELERLVND 185
           EN+I+ N T  L+SYIEAGCIN HDA Q+ R                  L+ ELERL ++
Sbjct: 61  ENIIKKNETRRLKSYIEAGCINIHDAAQSTRALHTSLSGLSDHLIKAKNLLIELERLTDE 120

Query: 186 VNIALETENPLCTSTVSDEDLELNEEEATMLKLPCGLLFNQFLPFLVQKPGASEYALLMG 245
             +A+E+   L   +         +EE   ++LP             Q P  +EYA L+ 
Sbjct: 121 AALAIESATQLDKDSSDGLQQVTCDEENETVQLP-------------QGPEVTEYAALIA 180

Query: 246 IIKVMVGKDHRMQEKIVSGLGLKSSSGELETYRLMWSLRPYIDDEIMHRAWKLI 282
           +I  M+ +++ MQ+KIV  L LKSSSGELETY LMWSLRP+++DEI++RAWK I
Sbjct: 181 VIYSMMKQNYVMQDKIVRSLSLKSSSGELETYSLMWSLRPFVEDEIVNRAWKWI 219

The following BLAST results are available for this feature:

BLAST of CcUC09G179550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887975.1	1.4e-78	71.24	uncharacterized protein LOC120077932 isoform X1 [Benincasa hispida] >XP_03888797...	[more]
XP_008455091.1	4.0e-73	67.38	PREDICTED: uncharacterized protein LOC103495347 isoform X3 [Cucumis melo]	[more]
XP_004136915.2	6.9e-73	66.52	uncharacterized protein LOC101209598 [Cucumis sativus] >XP_011658847.1 uncharact...	[more]
XP_038887977.1	9.9e-72	71.50	uncharacterized protein LOC120077932 isoform X2 [Benincasa hispida]	[more]
XP_016901720.1	3.8e-71	65.69	PREDICTED: uncharacterized protein LOC103495347 isoform X2 [Cucumis melo]	[more]

BLAST of CcUC09G179550 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC09G179550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C0U3	2.0e-73	67.38	uncharacterized protein LOC103495347 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0K2B6	3.3e-73	66.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G069170 PE=4 SV=1	[more]
A0A1S4E157	1.8e-71	65.69	uncharacterized protein LOC103495347 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C033	6.5e-69	60.15	uncharacterized protein LOC103495347 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1D9B8	9.4e-68	63.95	uncharacterized protein LOC111018794 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of CcUC09G179550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49645.1	4.2e-44	44.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35305	FAD-BINDING PROTEIN	coord: 66..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G179550.1	CcUC09G179550.1	mRNA