CcUC09G178580 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G178580
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr09: 27348533 .. 27353188 (-)
RNA-Seq ExpressionCcUC09G178580
SyntenyCcUC09G178580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACTTAGACGCAGCCAAAACCACCAATCTGTTGGACTCTCTAATCATTACTCCCATTCCCATTCTCTTCAAATCAGGGTGGCAAGATGCATTGATGTTGAGCTTGAAATCCCCACACGGTGGCAACAACCAGACCGAGAAACTCCAGCAACAGGTGCCTGAGCCTCCCAAAACTCATTGAGATTCACTAACACCTAGTTCGCCTTGATCGAAGCCTCAGCAGTCGGGATCTTGCAAGCCCAACTACTTCTATCCATCCACAAAACCTAACATCCCAACAAGGCTTGTTACAAGAAGCTCTAGGAACTCTGATCATGTTTTCTCTAGTATATGCGCCAACTTCCTCTAAGTATACAATGAAGCCTATTGTTAAATATAAAGTATATAAGATATATTACTAATATACATGTTAATTTAATACACCAATGAGGATAACATTTTAGAAAATTGCATTGGGTAGCAAAAAAAACATAATGATATTTGCGAACATAGCAATGATTTTCTAAAATTGTAAATATAGCAAAAATTTAAACCTGATTCTCAGTTTTTTTATTATTACGATTTTATGCTTATCAGTAGTATATATCTAATATACTTTATATTTGGGTATGTTTATCAGATGCTCTGTATTTGGTACATTAATCAATAGATATATTTTAGGTATTCTTGCAGATTGAACAAAATAAGTTAAAAAAAATTAGGCACATAGCCCAAAGTTATTACTTTTGCAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAATGAACCCACATGATACACCTAATGCATCTAAAACACTTGATACCCCTGATATATGCCTGATATATACATTGTTGATACACACTTAATATACTGTTGATAGACACTTGATACATTGATACCCACTTAATATACTATCGATAGACATTTGATACATTTGATACAATTGGATACAATTGATATACTATTGATATGTACACTACAAGAAATTTGGTTTTTAGAGACGAAATATTAGCGACAATTTCAAATCGTAGCACCATTAGCGACGCATTTGTATTTCGTCGCACCTGTATGCGACGATCAATTTTTCGTCGCAAATTTATGTGACGATTTCATCTTTCGTCGCAAAATCTTTACGACGATATATAAATATGTCGCACAATGCGACGAAACTGACGTTCGACGCATAAGTTTGCGACGATTTGCATCTTAGTCACAGACCCCAATTAATTGGGCGGGAGGTTTAGTGCTTTGAAGGTAGGCGACGATTCTGGTTTTCGTTGCATCATATTGCGACGATGGCATGTTGCGTCGCATTTTTATACAACGATTCCATTTTGCGTCGCACAACGCTGCGACGAGTTTGCATTTTGTCACAAATGTCATTTCACTTTTCACTCTTATCCTTTTTTTCTCTTTTCACAAATAGGGTGAAATTTTCACTCTTATCCTTTTTTTCTCTTTTCACAAATAGGGTTTTTTCACCGACGCTCTTTTTCGGCTGCTGATCTCTGCCCTCCACCATTCGAATCTCAGCCAACATCTCGCTGCTGGTTGCTCCGCCGTTCGTCGCCGTCACCGAAAGCATCACACATCTGGTAGATCTCCTCCATCCACCGCTGTTTTGCCGCCGTCACCAGTACGTAATTTCCATCTCTCTCTCCCTTTTTTTTTTCTTCCTCTCTCTTTAACTGTTGTGTCTCAACATATTCATTTAGAGTTGCAGTCATCAAGCACATTTGTCGTTGCTGTCAAATTTGTAATGGAAGCTGCCGATTTGTACTGGAAGACATCATCATCGACGAGGTATTTATTCAATATATATCTACATATATCTACATATTTTCTTAAAAATATTGCATTACATTATATATATATATATGTAGTTGTCCGGTCAGGATGGATTTATTCAGGGAAAGCAAAATTATAGTTTGCACACAATCTTTAAGGTTGAAATATATGTTTTAAATTTGTACTCAGATTGATGATGCGATTATTAAAGGAATTTTAATAGTTAAAACATTATTGTTTATACTAGAATCATTTGATTTTGAATCTATTATTGATTTCAAGGTTACTCTTAAATTTGAATGGCTTTCCATTACTATTGAATGATCACATGGTTTATACTCAATCAAGAAAACCCCTTCACTCCACATTCTTTCTTTCTCATTATTGGAAGAAATCAATTTTAAAAACTTTCTATTACAAGTGACATCATAGAGACTAAAACATATATATATATACGCACATAGCTCATCCTACATTGAGATGAAAAGTAGAAAATATGTAGTAAAATAAAAAGCTACAAATTACCTAAGAAATTAGGTAAGTATTAGATAAATATGAGATTTTAATATGAGTAATTTATGTAAGTTATAAAAATGGTTAAATATTTGATGTTATGAAAAGGAGAGGAGTTTGGAAAGAAGAAAAAGAAATGATTGATGGAAATAAGAGGTGTGTATTCCATGGTTGGTTGTGTGTTTAGAAACTATAAATTAATAACCATTTGGAGGATGAGAAAGAGACCGACAGAAAGCATCTTTTGTGGTGCATGAGTTTGTGTTCATGGAAGTAGCAAACTCAGAACAAAAAGAAAAAAAGAAAAGAAAGAGATAAATTTATCTTTTCTTTGAGAAATGGTTGCAAATACTAAGGATATGTTTACCCATACGAGTTCGTCCTTTTTTACCAGCAAATGTCAGTGGTGCAATTGTTGAGTTATCAAACTTTTTCAAGGAATTGACTGCGAAGACATTAAAAGTTGAGACTTTGAATAAACTACAAGAGTCGATTGTGATAAGTCTTTGTAAGCCTGAAAGAAAGAGTGGTAAAAAGTTTTGATGTTATGATTCATCTAGCTGTCCATCTACTAGAGGAAGCCAAACTTGTTGAACCTGTCGTTTATAGTTGGATGTATCCAATTGAGAGGTATGTTTATTTCTTTTTAGTTGATTATTAAACTAAAAATGTTTAGGGTCCAACCACCACTTTCTAACATACATATATATATATGTAGGAGTTTGAGAACACTAAAACAATATGTAAGAAATAAAGTTTGACCTGAAGGTTCAATTGCAGAAGCATTTATAGCAAATGAATCATTGACATTTTGTTCAATGTACTTCCATGGATTTGAAACAAAATTCAGTAGGACAGTTCGAAATGATGATAAATAGACTATGGTACATCAAAGAGTAATGGACATCTACCTATATTTTCACAAAAAGCACGTCCAATCGGTAGTTCATGATTGAAGGAACTATCACATGATGAATTACATAATGCTCATTGGTATGTCCTAACCACTTGTGAAGTAGTAGATCCATATCGAAGGTATGAACTTATGAAAAATCAAAACTTTTTACCATTCTTTCTTTTATTTACTAATCATATTTTTTCATAGAAAACATGAGATTGAGCTACAGAACAGAAATCTTTCTCATGATCTTGAGATGCATGAAGCACAATTTGCAGATTGCTTTAAAGATAAACTGAGTACTCCACTATTTGTCTTATTTTTCCTTTGATAATGACACTCATAATTTCATAGTGATTGTGAATTTCTTAATCATTTCTAGATGCAAATGCAAATTCAGTCAACATCTAATGAGGTTGTGCGTGACTTGTATGCACTTTTGCGTGGTCCTGATATTCGGATTAGTTCGTATACTGGGTGTATTATAAATGGTGTACGATTCAACTCAAAAGATCGAGATGATCGTTGCACAACTCAAAACAATGGTGCACAACTCAAAACAATGGAGTTTATGTTTTTGGTGGACATGATAGTGATGGGGTCAATTACTATGGTATCCTAACTGAAGTGATTGAATTAAAATATGTTGATAGGAAACAAGTTATTCTATTTCGGTGTGATTGCTATGATACAAATCCCAAAAATAACCGAATTCATGAAGATCATCATTTTACAAGCATAGATACTGGATACTTTTGGTATAAAAATGAACCATTTATTCTTGCCTCCCAAGCACAACAGGTATTTTATGTTGATGATATTCAGTTAAGGAATGGTTGAAAAATAGTCCAAACAATGCAACATAGACATTTATGGGATGTACCTGAAATAGAAGAAGTTGATGAACCTGAAGTAGATGTATATCAATGCGTAGATCAAGTTGGAGATTTTGAACCTCAAACACTACATAGATATGATGTAGATCCAACTGTAGTTTGTGATGACGGTGATTTGATTGAGATAGTATTAGATTTTGATGAATGAGTGAAAGACAAATTAGAAGACGATGAGAATGAGAGTGACGAGGAAGATAAAGAAGTTGAAGAAAATGATGGAGATGAAATCGAGGACGATGATGAAAATGAAGAAGATTATTGATAATAATAGGCTTAATGTGGACATATAGTTAGTATATTGAACTTTTTTATCTTTATTTTTCTAATATAATTTTATGTTTAAAATATAATTTTATGTTTTATAGGAAAGAATGTCATCAAGTAATGAAGAGAACATCGTAAACACAAGTAACACTCCCACTAATAACTAAGTTCGTGGTGTTACACGACGAGTCGAATTACATCGTGTGATTGAGGCAAGTGGAGGAAGAATTCCTATCTCATGGGATCCCTTCCCCGGGAAACCAGTTGGGAAAGTTGCGAATCTCTTTAGCAATGAGATTGGTACATTGGTAA

mRNA sequence

ATGCACTTAGACGCAGCCAAAACCACCAATCTGTTGGACTCTCTAATCATTACTCCCATTCCCATTCTCTTCAAATCAGGGTGGCAAGATGCATTGATGTTGAGCTTGAAATCCCCACACGGTGGCAACAACCAGACCGAGAAACTCCAGCAACAGTTGCAGTCATCAAGCACATTTGTCGTTGCTGTCAAATTTGTAATGGAAGCTGCCGATTTGTACTGGAAGACATCATCATCGACGAGATGCAAATGCAAATTCAGTCAACATCTAATGAGGTTGTGCGTGACTTGTATGCACTTTTGCGTGGTCCTGATATTCGGATTAGTTCGTATACTGGGTGTATTATAAATGGTGTACGATTCAACTCAAAAGATCGAGATGATCGTTGCACAACTCAAAACAATGTTTATGTTTTTGGTGGACATGATAGTGAGGATGTACCTGAAATAGAAGAAGTTGATGAACCTGAAGTAGATGTATATCAATGCGTAGATCAAGTTGGAGATTTTGAACCTCAAACACTACATAGATATGATGTAGATCCAACTGTAGTTTGTGATGACGATTTTGATGAATGAGTGAAAGACAAATTAGAAGACGATGAGAATGAGAGTGACGAGGAAGATAAAGAAGTTGAAGAAAATGATGGAGATGAAATCGAGGACGATGATGAAAATGAAGAAGATTATTGATAATAATAGGCTTAATGTGGACATATAGAAAGAATGTCATCAAGTAATGAAGAGAACATCGTAAACACAAGTAACACTCCCACTAATAACTAAGTTCGTGGTGTTACACGACGAGTCGAATTACATCGTGTGATTGAGGCAAGTGGAGGAAGAATTCCTATCTCATGGGATCCCTTCCCCGGGAAACCAGTTGGGAAAGTTGCGAATCTCTTTAGCAATGAGATTGGTACATTGGTAA

Coding sequence (CDS)

ATGCACTTAGACGCAGCCAAAACCACCAATCTGTTGGACTCTCTAATCATTACTCCCATTCCCATTCTCTTCAAATCAGGGTGGCAAGATGCATTGATGTTGAGCTTGAAATCCCCACACGGTGGCAACAACCAGACCGAGAAACTCCAGCAACAGTTGCAGTCATCAAGCACATTTGTCGTTGCTGTCAAATTTGTAATGGAAGCTGCCGATTTGTACTGGAAGACATCATCATCGACGAGATGCAAATGCAAATTCAGTCAACATCTAATGAGGTTGTGCGTGACTTGTATGCACTTTTGCGTGGTCCTGATATTCGGATTAGTTCGTATACTGGGTGTATTATAA

Protein sequence

MHLDAAKTTNLLDSLIITPIPILFKSGWQDALMLSLKSPHGGNNQTEKLQQQLQSSSTFVVAVKFVMEAADLYWKTSSSTRCKCKFSQHLMRLCVTCMHFCVVLIFGLVRILGVL
Homology
The following BLAST results are available for this feature:
BLAST of CcUC09G178580 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC09G178580 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC09G178580 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC09G178580 vs.
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G178580.1CcUC09G178580.1mRNA