CcUC09G178280 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G178280
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionLA RNA-binding protein
LocationCicolChr09: 26197630 .. 26216198 (+)
RNA-Seq ExpressionCcUC09G178280
SyntenyCcUC09G178280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGTTTGCAGAGCACCAATTAGAGCTCGTCGTTGTCGTCCGTCGCCCGACGTTGCCAATCGTCTTTTGCCTTGGTTGGGTTAGCCTCGTTCGTCCGCTCGCTCATTGATCCCGCAGCCAATCAACAAGCTTCATGTGGTTCTGTCCTACATTCTCTACGCCGTCGTCGATCTTCAACCAGTCATCGCTGCCGCACAGTAGCTGTTGTGTGCTTGCTGGAATCTTGCATTTGGGTATGGTTTTTGTGTGATTTTGGCAAGTGTTTATGGATTTTCTTGGTGATTCTTGAATATTCTTTTGTTTGTGACCCAAATTGGTTAATGCTCATTATATTTTAGCTTTAGATTCAAGTTTTGAAGGAGTTTTACAATCAGAAGTGTGTTATCCAGCGGGAGTCAAAAAGTCGATTTTGTCAATTTTGGTAAGTATTTAAGATTGTATAAGTTTTCAAGGATTTATGGTTTGATTATTGATACTGGAAAATTGGGTTCTTAACCCTTAATATTGAATTTGTCTAGATTGGACTCGTTGTTTGGAGTTTGGAAGAGAATTAGAACTTAGTTGCATTTTAGGTGAAGTTGTTTGAACTTGTTTGGTTATTTTATTTTATTTTTTTTTTATTGGAATTAGCCCCTTAATGTTGAACTTAATTTTGATTAATGTGTTAAGGATTGATTCAAGAATTTCACCCAAAGACAAAAAGGGTTTGGATTGCTAATTCAATTGATCTTAAATTTGAGGTAAGTGACTCTACTACTAAAATGTCTTAGAGCCAGGTGAAAGTTAGACATTTGTTAGTGTACATGTTTTATGTTGTTTTTTTAAAGTATATATAGCCATGTGATTCACTACGAAATTATGAATGTTTTGTTATGTATCTAAACTAGTGCATGAAAGTGATGCACTGATATCGATTCGTTACTATGATATTATATGCATGTTTATCAAGACTGTTTAACATGACATTATTTACGAGACATTATGTGGGACACACGCCTATGATAATATTACATGAAATTATGAGATTGAGTGCAATATCTTTTCCTTCCACAAAAGTGGTGCATGTCCAAGGGTTCCAGTGCATGAAAGTTATGTGCTAGGATTGATATGTGTGAAAGTGACACACATCCAAAGGGAATTGGGGTATATGAAAGTGGTGCACGCACGGTTATGTGTATTGATCGGCCAAAAGTGTATGAGTAGTCTTAGTGCAAGCATCCACTATCGGTGAAGGTAACCTTGAAGTATTCCAAAGGTTGAATCCCACAAGACTAGCTACCTAATTGAGTTTGTTTTAAAGCAATGCAATCAAGTGACCTACTATAACCAAGGTGAAATTGTTGTGAGTTGATGTGAATAAAGTTTACAAAGATAAAGACAATCAATGATGGAAGTAGGGTTTCAACTATATTTTGCCGAAGTTCATGAAAACCTGAGTGATGTAGTTGCATCATGCCGACACATTGCTTTACACATGAGCATGATCTTCACCTATTCAGTCTTGTTTCAAGATCTTTTAGAAGCCTAAGGAGCTAATCCTGTATCTCTATGGTTAGCTAGACCTTAAATTAATTTCATACATATTCTTTACCCTAAGGTGCCATTTATCTCTAAGGTTGCATGGTGATTCTATTTCTAGGCTTTAATCCCATATTCCCATGTGAAATCCGCTTACACCCTAACTTTCTCATTATTAAGACTCCACTATATTGCTAACTGGTCAATTCAAATTAACAATGTAATTCAAATTAACAATGTGTTCCATATAATCAATAAGGGAAATGCGCAATTAATGCAAAATATGACAATTTAACAATTACTCAATCCATGAATCCCTAGGGCATTCACATAATTAACCCCTTGATGGATTTAGCTCATGATAAAGAACAAATGAATCATTTTCATTAATTTCATAATTATAAGGACAATGAATGTGCAAGAGTAGCAAATGAAGAAATGAAATGAAGTTTAGTGTTAGAACATACAGTAACACTCCTCAAAATGGATTCCTCACTCTCTAATAAACTCTAGGGAGAGATTTTCCTCTCTCTACACACGCTCTTTGGGACATCCCAAATTTTCAGGTAACTTTAAGCTAATTATCTTGAATTAATTTGGGTTAATTGTTGAATTTATAAGGTTTAATTTAATTATGTGGAAAAACAATTCATTCAAAGTTAACAAGACCAAAGTTTTGGGAATTAAATTTAATTGGTGGAATTTCAATGTAATTTGGGATCTAGAAGTTGATTTCAAATTGAGGAGTTGGAGTTTGGTGGATTTAAGAGAAAAAGTGATTTAAAGGTGGAAATTTTGGTTTGAGACATTAAGTAATTTATTTGGTATTTGGGAGAGTAGTTTTGATTGTTGGAATTTGTAGTAATTAAGTGAAAACTTGTGTTGGGAAAAGAAAAAGGAAAAAGTAATAAATATTTATTTTTGTTTTAATTGATTAGGGTTTTTGAGGGTTAGAGTAGGTGTGGTTATTTATACCAAGGGTTTCTTGGTTTGCATGCAGAATTAAAAAAAAAAAAAATGGAAAAGAGAAAATGTCTTCCCTTCCCTTCTTTCTTCTCGTCGACTTCACCGTGCGCCACCCCCTGAGATTTTCCTTCTTTTGTCTTATGCCTTCGTTTGCCTGCTGAGTGTCACAATCGCTTACTTTCGAATACGGGGTGGGCGATTGTGCGGCACTGCTCTAACCCGGTGAGCAAGTCAGCCGTATAAAAACCGCGGGTTGCGGGCAAACTCGGGGTATGATGTAGCCTCTACTCGCGTTTTGAGAGAAAATGGTTTTATAAAACGAGAGAAATGGAAAGCTTTGAAAACATCATTAAATAAAGCATTGAGGACTGACAAATGCAAGAAAGCTTGTTTGTAAAGAGTACGACAATACTTGGTCGGGGAGTCAACTAGTGGGGTTCCCCTATAGTACATTCTAAGCAAAAACTAGTCTGCCAGCCTTGCATATCAAAACTGGCGAAATGTCACTCGAAAGAAAAACATCATTAAAATGAAAACAACTTCCTAAGCTACTTACAAGACATAAATATAAGCTGGTTGAGGGTGGTTTGGGCATGCGACCATAGGCAAACACTTCTTGGACAAGCATGCTCAAGACACTAAGCTCGCCATCTGCCACTAGCCACCATCGATCGGCATCGCCAGCCGTTGTTAGTAAACTTCCATCGCAGGTTTTAGTGTGGTCAGGCCTCTCTCCCTCTCGTCTTCGCGTCTACCGGTGCCGCCGATTGCAACCGCCGTCTGTCGCCGCCTTTGCCAACCGCTAGCAATTCCCTCTTCGTCGAATTCTAGGGTTTTGGTGGGTTTTCGTAAGAAAATTGGTCCTCTTATTGATTTGTCATGATTGCCTATCATGTTGGCTTAGCCATTGTTACCTTTGTGTTGGTTTTTGGAATCAATTTTTTAAGGAGCTCGGGAACCAGAAGCAAGGTCGATTTTGGAGGAACTTTTGGTGGGTAAGAGCTACTATGTAACTATTGTGGGTGGCTGAAAATTAGGTTTTGACCCCTAATTGATTTTTTATTTGTAGGTTGGTCTCACCATGGGAAGTTGGGAAATTTTGGAACCCAACTGTGCTTGGGGTAAGGCTACTGTGTTTAATTAGTTGTGAATTATTTTGGCTTTTTGCCAAAAGGCTTACTGACTTACTACTGCTGTCTGCATTTTGGTTCCCTGGTTGCATTATTTACAATTAAGATTACCGTCTGCCTATCCCATAAGCATGCATATCTGTTGGGTTACTGTATTTATGAGACCTGTATTATCTGTTCTGTGTTATATGTTGGGGTACTGTATCTTTGAGATCTATGTTACCAGTTGGGCTATTTATTGATTACTGTATTTACTGAAATAGGAGTTCTAAGACTAAATGTTGCCACGATGGACTGGAAACTCTAACTATGTAATGATGACTGATTATGTTAATGGTGATTGTTATCCTATTTATGAAGCCCTGCACCCTCTGTTGACATGAACCTTTGGGTTTATGACTGTGACCTTCGAGATCACTGCGTGCGTCTAGGTTCACTACTTATGCTTATATCTATGTTTGGTACACTGGTGCATGTGATAAAAAGGACAACAAATTCACCTGGTGGGCCAAGTAGTGTCACACCCCCTCCCAGACTACTCTACCCAACCCGAGAAGAGATGTGAAGACAACATACATCACCCCTTTTGTGACGCATACTATCCACTAACATACTTATCCTATACTGTTCACAACATACATAACACTCTTAAATATATATCAACCATAACATATAGGAAATTATATATATAACGATAATTCAGAATACAATTCTTCCATAAAGCCCTTATACAAAATCATGTTTCAACTCCCAGTAAATGTGCAACTAGGTCTACATGCCACCTATATAAGGTTTTATATACAAGCAACTTTGCAAAATAGGACAATTTTCTGGAAACTCGAAACTTAAGCAGGGCGAGTTGGAGTAGGCAAAGCACCAGGAACGTCCTTGCTACCTGGGAGGAAAAGAAAACATGGAAAGCGTGAGCTAAAAGCCCCGTGAGTGACTAATTTTGTAAAACCATCTTTTTTTCGAAAACAGGCATGTTAAAATCGTTATAACACATATATGTAAACGTGATCCAAATAATCATTTATGTAAAATCATAATTTTCAACAACGTAATCAAATCACATATGTTCATGCCAAAATGATCGTACACGAAAATCAATTCGTTCTCAAAACTTTCCCTTAGTCAGGGCGGCGCGAGACTCAACGCACCCGACGTCGAAAACATCCTTAGTTGAGGCGGAGTAAAACTCAACGCACTCAACGTCGATAACAACCTTAGTTGGGGTGGAGCAAGACTCAACACACCCAACGTCACAACCTCCATGTGCACATAGAAATATCGCGAGTTGCCCAAGTACCTTCTACGAGTCCTTCAGTACTGGGTCCCGAGGAAACTCACATGCCTTCTCATGTCCTTCAGCATTGAGCCTCCTCTAAAACATTTTAGAAACCAGTATTCTACATAAATAGTTCACATGAAAACTAATTTGAGCCATGCGTTCAACGCATAATAATAATAGAATAACAATAAAAATATTTCTTTAGACAAACAACTCCGCTGACATCGCATAAAATTAGCCTGTTAAAAGTTGAGTTGAGAATAACTCTTTTAACACCCCATAATCAAAGGTGAGAGTCCAAGATCAGCGCAAAGTAAATAAATGGTACCACTCTCGACGCAACCAAAAAGGAACGCGATAAGTGCCAAGTTGTGAAAGGGTATTTGCTCGATGTTGGCTGCCTCCATGCATCCCATCGTTGGTATTTCAAAATGAAGGTAGATAGCCCGGATCAACGCAAGTCCATTATTCTCTTTAAAAAAAAAAAAAAAATGGTCCCGTTGCCGGGACTCTCAAGCATGCTCAAGATCTTATAAAAAAATCAGATATATCATGATAAACAACATTTCACAACACACCATTCAACATCTTATAGAAAACGTATAAAACATGCCTTGTGAACAATATCATCAAACATCATGCTTTTCAAGAAAACAATTCATCTCAAAGTTATATCTCATAAGAAAAACCAAACTAAACATTTTCAATAAACTTCATTTTCAAAGAAGAAAAAGTGTCCCTCACAATTTGTCCTTAGGCCCTGAGCGGATTATATGCCTTTCCGAGCTCTTCTTGGCCTGTAAGAACACATTCCTCACGTTACGCTTTCCTTAAACTTCCTTTACATGATCGTTAAATGTGCATACTTAAACTCTAATCATGATTCACCACCGAGACTCCCTTTCTTTTCTAAAATAAACATAATAAGCGAGATTCTATGTCACTAGCGAGATTACCAACGAGATTTCACCTTACTAGCGAGATTACTAACGAAATTACACAACAGATACACGGCACTAGCGACACCAGAATAAGCGAGACTAGCGAGATTACCTGAGTAGCGACACCAAGTGAGAGTCAGCGAGATTTGTGAGACAAAAACCTCCTCTACTCACGCTCCAATTTCTTAGTGATACCAGCTTCCTAACGACATCCGACAGCAAAGTTTCCTCCTTTTCTTTTTGTTCTCAATCTGTCAGTTCAAAGTTATATTTTCAGCCAGATTTAGAACTTCTTTCCTTCTACAAACTTGTAGAGAAACATGTTTTCTAGCTTACGTCAAATTTTCGTGGCTTAACTCGTCCTGGTTCGTCAAATATTGCAAGTTTTCTCCGGGCTACTCCAGATTGCACAGAAATTCTTCCAACTAAAAGTTTACATGTTTCTATTCCTTTTCAACTCAGGCATCCTTTATAAAAGTTGTTCAAAATTGAGTTAACTTACTAACCTTAAAATTTCAGTCCAAAATTCAATCTCTTCAGCTCGATATTCACCAAACACCAAACCTAATTCGGACTATGTGACAGCAGATGAAGCTTCTGTTTCAGCTTTAGTTTTATCATGAAACTGTCCAAAACCTTGCACGAATTTGCCCTAGAACTCTTCTTCAACCTCTCCACGACGTGCAGCTAAAAGATAGCATAGAAATGAGTTTGGAAATGAAGAAAAATAAGTCGGCAAAATTTTCCTTTCAATAAAAAGCTTTAACCGACTTCTCCCATCCTTATCTTCTCTTCTTTCTTTTTCTTTTTTCTTCTCTTTTCTTTTTGCTAATTTCCTTTTTTTTCTGTCTTCTTTCCCTTTTGGTTTCCTCTTCCTTTTTTTTTTTTTTTAATTTACAAAATAAGATTATTAATACTAATTCGCTTAAAGCTTTTGAACGTGCTTACAAATTAGGTGCTTACAAGTAGTGGGTCACTTACTGAGTATTGTAATTTTCTTAAGTAAGTGTCGGGATAGACAGACACATGATAAGAGGAATCCATGATTGTGCCATGGGACGTTGCTTCTGCATTATAGGCTCATATTTTCTTTTCTTAGGGTATAGGATTTGTTGTTGATGGACAATTTAAAGTGTTTGACTATTTATTTATTTAATTATTTATTTAATTCTTTATTATCTTCTTATTTGACTTAAATAAATCGTTCAAATTAATTTTTATCTTGCATTATGATCAAATGTGTAATATTGCCTAAGTTCCAAAGTGCTTTACAAAATTATGCATGCATAGAGTAGTGTCTTATCGTTCTTGGAGGAAGGCGGACAAGTTGAGCGGAGAATCTTCTTGGAATGGACTGATTTTCGATGGAAGAAGCTAAATGCTTGAAAGAAAGGCTCCAATCCCTTTTATAGGCTTCAAAAGAGGTTAAGTAGGCCGAAATCCATGTTCCTGAGGAGACCGAGTAAATCACAAATGGTTCATCCTATTTTGATGTAACAAAAACTATAGTTTAAGACGCATTCCCACCTCACAATTTTATTAATGAGTTAATACAAAACTTTAACGTCATAGACTAAAATAAATCTTTCTTTTAAGTTTAAGGACTAGAAGAAACGTTTTTAAAAACTAAACTAAAACAACAGTCAAATTAATGGATTAAAATAGGATTTAAACCATGAAAAATTAATTTTTTTTTTTTAAAAGGGCTTCTAGATAAAAAGCCTTAATATAAGGTCTATATTACGTTAATGTCTACAACATCCCATCTTTTACATAAAAGGCCTTCTTGCTAGACCTTTTTCATTACTGTCATAGGCTATTTACCATTTAAGGCTTATATATATATAAATGTTTCTCTCTCCTCCATGCACAAAGTTTTTCTCTCTCCTCCATGCACATGCTTAGGGCTTCACACCCATTGATTCTTTTTAAAAAAGAAAAAATGTTAAATTCTTAAATTTCTCCTTTCTTCCTTTTCCCTTTCTTTTCTCTAGCCGCTGCTTCCTTCCCTCAATCCACCCCACCACTGAACATGACATCATTGTCGCCATTCCCGTCATTCAACTCGTTGTCTGCCGTTTCCATCGTTCAAGTTCCGGTCGTCGTTCAACTCGTTGTTCCCACTATTCTAGGCATTCGTGTCTGCACCAGTGGCCGCTGTTTCGACCATCCTTGTTTTCATCTTTTTTTTTTTCTTTATCATATTTCTTCTTTATATATTCATTTATATATTTAGATTTCTTGTTCTATGATATATATACTTATATATATTGAACATTCAGTACATCAATAATTATATATACTGTGGTATATAACTTTGTTTATTTAAACATTATGTGGTTTGGAAATGAATTTGAAGTTGTCACATTAATTGGAATTAGCAAGGGAGTTTATGTTAAGTTTTGATTTATTGGAATTTCTAGCTACTTAATCAGAATTTATGATATATACTGGAATTTATGATATATAATGTGGTTTTATGTTGAATGTATAGTCAATCTTACCAGTATATTTTATATATTGGTTGGAATATTTGCAAACATACAAGATAAAACATACATATCAATACTTGGGATATATACACCAAATAAACACTAGAATATATAGGCACAAACAATATCACCTAATTAGAAATGTATACATATCTGATTACTTAGGATAGATACCCAAAACAAACGGTTGAATATATTGTCATACCTATCAAAACATCGAAATACTTAATATATAGAATATGTACACCAAATAAACAATAGAATTTGATCTCTACAAATTTGGTTTGTTTTTTTTTATTTAAATTTGATAATCCATCAATCTTAGTTTATGGTCTAATTTGTAGCATATAATATGAGGTATACATTTACAAAGTAACTAAATATACATGTATATATATGACAAAAAATGTGGAATATATAACTCAATGAAACAATACTATGATTAAAATTTGGAGTATATATTATATAACAATATTAAATATATACTTCTAAATATATTTGGAATAATGTCATATATATTTGAAATATATCGTTGTGTATATTTGAAATAAGCCTTTGTATATAAATATAAAAATAAAATAGCAAAAAATATTTCTTACGTGAAAATTGGATCGAAAATCATATAATTACAAATGAAAAAAAAATCTCAACTAATTAATATTCTATAATAAATGCATATTCTTTTTCCAGCATATTAATTAATATAAAATTAGTCAAATCTCATCATTAACCCTACCTAAAACACAATAATCAAGGCTAAAAGAATAAGAAAGAACAAAAAAGTACGTAAAAAGGTGACTCTCATTAATAACAATTTATAAATATAAAAAAAAATAAAATGGAAAAACGGGAAAAAAAATGGAAGGATAATTTAATCCAAAAAAAATTGCTAAATTCCTTTTTTGAAAAAATACACATTCAAATCACATCCTTGAAATATAAAACCTAAAAAGGTGATTTATGTAAAAATCTCAAATTTTTTTTTTTTTTTTTTTTTTTTTAATTTAACAAAATTGGGCCTTTATTAGCGTTCTTCTCAGTTCTCAATTGTGATTTGTGAAGACAGAGCTGGTTGGTTGCCCTAGAAAAATCAAAAACCCTAGTCTATTTAAACGGTTTATTGGCGCAGCCGTTCATATACGAAAGCCTTGCTTCCATTCCGCCTTCTATATTTTCCTCCCTTCGACTTTGCCATACTTGTTCTTTTCGGCTCACAGTATTGATTAATTTTGTTCAAACTATTTTCTATGTCATTGATCTTTCCAAACATCTAAAGATGTTTTCGATGTAGCTTTGCAATCAACTACACTACAAACTCGCTACCGAAATCCATGCTTTGTTCTCCCTGCTGTTCTTGTTTCTTCTGTTTTCCTAATTGTTTGATTGCTGACATGATCGCCCATTCTCCCTCCGCTTTCGATTTTCTCTTCCAGTTGTGATTTTTGTTTCTACTTTTTGGTTCTTGCTAATTCTAGTAAGATGATTCTCTTTATTGTTTGGTTTCTTCGTGTTGAGTTTTTAAATGTTTTTATGATTCAAATCCTGAAGAATGAAATGATGAGCTTTATTGTCTTGATTGCCGTGATGATGGCTATTTTAGTATTAGCGATTGATTTTGTTATTGTCTCCAATATTGGTTTTCCTTTCAGTTTTAATATTCTGAAGGTTCAAATCGTTAAGAATGAAATGAGGAACATTGTTGTTTTGATTGCTGTGATGATGGCAATTGTTGTATTAGCTCTATCTGATCATTCTTAATACTATTTTGGGCTTCCTTTAATCTCCTTTATTGAATTTTTCTTTCTTTCTTTTTGAACTTGAAATTCTCGGTTAAATGTTATTGAGGACGTTTTGGGTTAATGTCTTCGCTTGCTAACTTTGTATTTCACTTGCTGATTATTTTTGGTGCCATTGATTTTGATATTCTGGGTCTCGTCTTACATCCTCAATTCTCGTTAGTCTTGTATATTTGTCTTCCCTTCAGTTGAAATATTTTTAGTGTTTAAAATCATCAAGAATGAAATGAGGAACATTGTTGTTTTGATTGCTGTGATGATGGCAATTATTGTATTAGCTCTATCTGATCATTCTTGATACTATTTTGGGCGTCCATGTCCTTTTATCTCCTTTGTTAATTGTTTTATTTCTTCTTGCTTTTTTGGCTTTAAAATTCTCGATTTTTAGTATGTTCATTGTCTATTTCTTTGTCTCCTTTATGGTCATTACGGATGTTGTATTGCTAACTTAGTATTTCTTCAACTACATTGAAACTTGTAAATAGAAAAAAAGAACTACATCAATTCTTTGGTCGTTGTCATCCTTTTAAGCAAAGTAGCTTTTATGTTTATCATTTTTACTTTTTAAAAATAGTAGTGCGAAGGAGGTGGAATGAGCTTTATTTCTAAAAACTAAGAACGAAATGTAAAAAATTTAATGGTTACCAAATAATTGAGAAAATTGTTAGGAAAGAAAAACTGAACTTTGAAATACCTGACAGTATAGAATCAAGTAGGTAATTTATATTAATGCTTCTAATAGCTCCACATTTTATAATGAAAGCAGCAATTGAGGGCTAAGTTTACTGTTGAACATGAATGAAATTGAAAGTTACGAGATTATGGGATATTTATATGGATGATCCATTTTGAGAGACCCACTCTACTGATGTTATTATTGTGTATTAGTTGTGTGAATTTGCTCCTTTAACTCTTGTTTCTTCTTTTTTTGAATTTACTGATGTTATTATTGTGTATTAGTTGTGTGAACTCTTGTTTCTTCTTTTTTTTGAATTTATCACATTAACTGTACTTTCTTCTTGTGCCATTTTGTTCTTGTAGCTTTTTTTCTTTTTCTTTTTTGNCATCAGATTTGCCGCATGTTAATACAAGTCCTATATATTCTGTTTATTTATTCAATGTTGAATCTTTTGTTCTTTTTTGTTGAAAATAACTTCCCCCGAAATGATGAAAAGAGACTAATGCTCAAGATACACAAGCCCTTCCACAACAAAGCTCTTCCACAACAGAACGTAAAATTAAAGCAGAGAAAATTAAAACAATGTAAATAAAACATTAGAACTTTTCATTGAATGCTTTGTTGTACCTGGATTTTGGAAATGTTTGTGCTTAACCTTTTGTTTTATTTTTGGGTGGATTATTATTTTATTACACTTAGCCAAGTATTTCATTTCTACTGAATGTAGTCTTGTTATTTATATTTTCGTTTGGCCTTATAATTCCAGTTGGAGCAGCTCTTTGACAGCTCCCTTGCTGGTTGAGTATTACTCATCTATTTGTAGCTTTCCGCTTGTCAATGGATATTTTCTCGTTTCTTATCTAAAATTTCTGCCTTCAGCTAATCTTGGATTTTTCTTTATATTTTGGTTGCAGCGATGAAAATCTGAAGAATGACCATTACCTAATATCTTTGATGGATGACCATGGATGGGTTCCAATATCAGCCATTGCTGAATTCAAAAGGGTATAGTTTAATATTTATTGGAGTGTTTCAGAAAATGAGCCTTTTTTCCATCCAGAAGATCTGTCCCATGGATTCATGATATATATAGTCATGATAGAATGGAACACTGTGTTGTATTGATAGGTTAAAAGATTGGACCTTGTCGATATATTTGGCTTAGAAATTTCACCTTTCAGTTATCACGTTCTAGTAATTTGAAGATTTATTTGTCGTTAACATTTTTTTTTTTGGAGATTTTGATCTATGTTGCACTATTTTTCTTTTTTGTCTTTTTTCATTTTTTTGGCAAGACTTTCGTAATTAGAATGAGAGGATTCTTAACCAAAATGAGAGGAAGAAATGAGAAGGATTAAATGAATGGTCATCTCATTCCTTTCTTCGTGTTCACGTCAAGGGCTATTTAATGATCTTGTATGAATTTTCCATAAAATGTAAATAATTATGATTTGACTAAGGCTGTAATGCTTTCAAATCAATTTAAGAAGGATGTGTATATAAAACAAACAACAAAAGAAAAAAAAGAGATTGAATGAAAGAACTCTTGCAGCGGAGGAAGGTATGTTGTTGAATAGAAAATGGGTTTTTTGTTTTGTATACATATCCTCCTTAAATTGATTTGAAAGCATTATGACCTTAGTCAAAATTGTGCCTCTAAAGTCGAACAAGAATGAGTAGCATCGTGGAACAAGAACGAGTAGCCAGAGATTGTAGAAAGGAATGAGATGACCATTCATTTAATTCTTCTTGCTGATCTGATCTCGGTCTTGTTGATCTTGGTCTCGCTCTTTTTGTTCAGTGTCTATTCAAGTCTCTAAAAAAAGTCTCTGAGAAGATGAATGAAAAGAAAAATGCTGCAGGCAGAAGAAGAAAGAAGAAAAGGGTTAAAGTGGTAAATTTATGCAGTGAGACATTTCAGTGTACAAATTTCCCCAAGATTATCTAAGAACTGAAATTTTCCTTAATATTTTTGTGTCACACTTTATACTCCCACGAGCATAATTATGTATCATCTCCTGTTGAAATGGAATTTAAGTTAGTGGTACAATCTACTCTTCCTCTTGCACTCTAGATCATCGGCTCTTACATTTTGATTGATTAGTACTTGGGTGCTTCATTCTCAACTTCAATTTCTTCCCTACAAAATTTCGTCTCACACAAGGAGCGAGCAAGGTAATTCAACCTTCAACCCTTTGGGAGGGAGGGTATAAGATGTCTAACCAATTGAGCTATTTTCATGTTGCCTTCTTGTATGAAGCAATACAACTTGATAGTTCAAGGATTACATTGTATTAGTTCCACTCTTACATTTTGTATGTAGCTGTGCAGTGCTGGTAATACCGTACAGTGACGATACAAACTCAAGGTTGTTAAGTTTGTAACTTCTTTTCTATGTAATCTAGTTATATGCATTTTGAGGACAGGACAACATCAAGGGAGTTCAAATTGAACTTCAATATTCAAAGCTCACCAAGTCCGTAAGTAACATATTTTCATTTTATGATTCATTGAACAAGTAAGATTGGGCTGTTAGATGGATGCTAAATTCATTGGACTTTTTGTTCATTGTATATTTAGAAGAAAAGGTTTCAATTTTAGAGTGATTGATAGTATTCAACTGCTTTGAATTCTATTATCTACATCATTTAGAATTTGCAAGGTTGACATGAATGTTAGAAGGTTAAATGTTGTTGATGTTGGTACATTCGAAACATTTCCTTTATCCATAGCCCTCCATTATAGGCCCACGGTGTTAGTAGGCAAGCCAACAAAGTCCTAAGGGTTTTCCTATTTGGATGATGTTTTGAGACTGAATTTTCACTTTAGATTTCATTTCAGCAGGACCTTCAGTTCTAGAAGACGTTGTTACCTAATTTGGGGCAACTTCATTATGTGATTAGAGAATCTTAAGATCTATTATTTATATAATATTTATGTTTGTTTTACAACATACCTAACTTTTCATTAAGGAAATAAAAAGAGACTTATTGGAATACAAAGAAACCAGATAGGATGTCTTAGAACGAAGATCTAGTGGAACATGCTCTAGAATTCCAAACAATTCCATATCGGAAGTGTTTTGTTTTGAAATCATGGATCTGAATTTTAGTCAACTTCGAATTACCAATATTGATGGGTAAGATCTTGTATACATGAAAACTCAAATTGAAGGTTCAAACAATTTTATTTGAGAATTTTTGCTTATTTATTTATTTTTATATTATTGTTCCAATTTTTAAACAATCTAACTTTTGCTCCATTGGTATGGGTGCCCAAGCCATCCATTTTTGCTCCCCTAGTCTTGGGTTCGAGACCTAACTAATTCTCCTTTTTTTTTTTTAATATAATATTTTTCTTTGAAAAAATTAGGAAAATTATTTTAAATGACAAAATTGTTGAAAATATTTACAACCAATAGCAAAATACATCGTCTATCTGCGATAGACTACTATCTGTGTCAATCGCCAAAGCGTTGTAAATATTAGGCATTGCCCAACGGAACCAACGGAAAAGCTACATCTAGTATTGGACCAATGATTTGAACGATACGTAAACTTCAGGACTAGACGTTGTAGGATTTATTCTTATAATAAAATGCAATATGTCAAAGTTTTTTTGTTTCAAAAAGTATTGAAATCCAAATTAAATATTCGATGGAAAAGCAAGTTGATCGGTTAATTTAATAAAAAATGAAATGGGAATTTGCACTCGATTTTGTTGATACCGTCCAATGGAATCAATAGTGACACGAATAGTAGTATATTGTGGTCTATTGGTGAAATTTTGCTATATTTGTAAATATATTGGTTTCTTTTGCTATATTTGAAAATAACCCTATTTCTTTTGTATTTTTTTTAAAGATATTTCTTTTTGTTAACATTTTTTTTGACCTTTTCATTTCTATATAGTATTGTTCTTTTATTTATTATATTTCCTAAGTTTGCTACATATATATATTAGTTTAAATATATTTTTTAAAATTTTTGAATATTAAATTTTGTAGATTAGTATTTGAGTTAGATATTTTTGTTTCTTATTTTCAAGAAATAAGAAATAAAAATAGTTATCAAACATATTACATTTTCTAGTTCTTAAAAAATAGGAAACGAGAAACGGAAATAGGAAATGGAAAATAAGAAATGGGAACATTATAAAATGGTCCCTTATGTCTATATGAAATCCTATGGTAATATATGTGAAACAAACAAACCCTTCGGGTAAGTTCTATCAAACAACTATCACTACAACAAAAGCAGACTTCTATGACTTTAAAAAACTGTCATTAGCATATTTATTGACTTTTTTTTAGTCTTTGAATCCACCGTCATCTAAGGTGTATAGATGACACATGAGAAATCAATCATCACTATAGTTTCATGACTTTTAAATACAATCAACAAAGAACATGTATTGACATTTATTATATTTCATGAAAACAATGTTTAATGACAATTTTCTGTAGTCAATAAATGACCAAAACGTTGACTTTTTCTGTCAATTAAAGCGCTATATTGACATTAAAATTCTATCACTGAACAAGAAATAATGTCACATTTACAGTGTTAAAGACACTTTTTAAACGTCATTGAATTACGCACATTATCACTTTTTTGTAGTCATTGAAATTTGATTGATGACACCATTTCATGGTTATAAAACTACATTTCATGACTTTGTCAAATGTCAAACAAACCATTTCAATGATACATGTTATTACATTTCATGACTTTTGTCAAATGTCAAACAAACCATTTCAATGATACATGTTATTACACCTGTGTTTCCTCCAATTTTAACACAAAATATGTACACAAACATATTTATAAACTTTCATATATAACAATAGAGTTTGTAACGTTAATCCAAGGAAACTATATACAACAACACTAGTAACCAAACTTTGGGTAAGTCATTTACAAATTTAGTAATTACAACTAAGTGTTGGCACAATATAAAAAAAAAAATTACAACACCTATATAAACATCTTGCTTGGTGGGATTCCTTGCTTCAATAGCCTTGTCCAAGAACCTAGTAAACAAAACATTTATTTCAGAATTTAACTCAATATAGCAAGGTGAACAATAATAACAATATGTAGGTTATATATGTTTATCGTAACATAACGATATTATTCTATTAAGTACATTTACACTAAAAAACCCACTTTAATCATACTAAGCTTCAAATAACACTTTAAAACAAAAATGATACATAGAGTCAAAATATAATCACATAAATAGGCTCAAAATCAACTTTAATAACATAGATAACCTCCAAATTTAATTCATTGCTTAGTTACTACAAAGCTAACAAACTTTTGACATTAAATGTTAACATAGAAATCATGTAAGAAGTATTGTAAGTTGTCCAACTTTTTAAGGGTATAACTACTAAAAATATAGAAATACTCATACATTAGTCTACTAGAAAGAATAGGGGTCAAATAAAAAAACTTTAGCTCTGAAAATATTTATCACAAAACAAGAATATCTTCCAAGAAACAAGTTGGGTAAATGACAACTTGTTTCTCAAAACAACAAAAAAATGCCCAAGCGCCACTTTAGCTCTGAAAACCAACCTAATAATTTTTGAAAAGTGTGTAAGTGACACATTGATTCTAAAAAAAAAACATAAAATGCTTAGGTGCTTTTACTCTCCAACCAAACCTAAAAACCATCTAAAAGTGTCTAAGTGACACTTTCACTCTCAAACCAACATAACAAATACCTAAAAGTTTTCCAAGAAACAAATTAACTCCCCAAACAACCAAAATAGTTCATATGTGCACTTTGATTATCAAAACAAACTATAGAGTTTCAAAAAAGTGTGTAAATGACCATTTGTTTCTCAAAACAACAACAAAAAAAATGTTCAAGTGCCACTTTAGCTCTAAAAACCAACCCAATAGTTTTCCAGTAAATGACACATTGGTTCTCAAAACAACCTAAAATGCTTAAGTGCAACTTTTACTCCAAAACAACTTTAAAATGCCTAAGTATGACTTTCAAACTCAACACACCTAAAAAGTGTCTAAGTGAAAGCTTTCACCTGCAAAACAACTTAAAAAGTTCCTAAAAAGTGTCCAAGAGACTTGTTAACTCCCAAACGACCCTAAATAGTACTTAAGTGTCTTTTTGATATTCAAAACCAACTAAAAAGTAACTAAAACAATATCTAAATGACACTTTAACTCCCAAAACAACCTCAAAATGTTTAAGTATGAATTTCAAACTCAAAACCAACCTAAAAAGTGTTTAAGTGACACTTTCACCCACAAAACAACTTAAAAAGTTCTTGAAAAGTGTTCAAAAGACTTGTAAACTCCCAAAACAACCTAAATAGTTCTTAAGTGTCTTCACAATATTCAAAACCAACTAAGAAGTACCTAAAAAGTGTCTAAATGACACTTTAACTCCCAAAATAACTTCAAAATGCCTAAGTATGACTTTCAAACTCAAGACTAACCTAAAAAGTGTCTAAGTGACATTTTCACCCTCAAAACAATTTAAAAAGTTCCTAAAAAGTGTGCAAGAGACTTGTTAACTCCAAACACCCGAAATAGTACTTACGGTTTTTTTTTATTTTTTTTATTTTTTTTATATTCAAAACCAACTAAAAAGTCTAAAAAGTGTCTAAATGACACTTTAACTCCCAAAACAACTTCAAAATGTCTAAGTGTGACTTTCAAACTCAAAACCAACCTAGAAAGTGTCTAAGTAACTTGTTAACTTCTAAAACAACCTAAATAGTTCTTAAGTGTCTTTTTGATATTCAAAATCAACTAAAAAGCACCTAAAAAGTGTCTAAATGATACTTTAACTCCTAAAACAACTTCAAAATGCCTAAGTATGACTTCAAACTCAAGATCAACCTAAAAAATGTCTAAGTGACACTTTCACCTTCAAAACAATTGAAAAAGTTCATAAAAAGTGTGCAAGAGACTCCCAAAACACCCAAAATAGTACTTAAGTGTCTTTTTCATATTCAAAACCAACTAAAAAGTACCTAAAAAGTGTCTAAATAACACTTTAACTCCCAAGACAACTTCAAAATGTCTAAGTGTGACTTTCAAACTCAAAACCAACCTAAAAAGTGTCTAAGTGACTTGTTAACTCCTAAAACAACCTAAATAGTTCCTAAGTGTCTTTTTTATATTCAGAACCATCTACAAAATACCTAAAAAGTGTCTAAATGACACTTTAACTCCCAAGGCAACTTCAAAATGCCTTAAGTTCCTAAAATGTGTCAAAGAGAATTTTGTGCCATGTTAATTAATAGAAAAGTTACACTTGAAAGTCTTATTTGTCCAACTACAAACCATTAATTTTGTGCCATGTTGATTAATAAAAATGTCTTACTGTCCAACTACAAGAGTGTTTCATTATCGATAATTCTCTAAACAACCTAATCATGAAAATTCATATAGTTTTTATTTTAGTTTAAATCTTTTACTAGAATAATAAACGAAAGTAAACAAGTAAAAAACCCAAAAACAAGTTGGAGAAAAACAAAGCAACGCAACTAAAATAGAATGGATAAAAATGGTTACTTATCTAGTTATTTGACTTATGTCATGTGCATTGTGATTGAGGTGTGCAATATGTGCATTGTGATTGAGGTGTGCAATATGTGTTGTGTTTTGGGATACAGTAGAGAGAAGGGAAACCTAGACATATTGAGAAAGAGAATAAGCTCGCAACCTTGCACGCTGAGGCCGAATATTTCATATATATAGCTAGGTTGAATTGA

mRNA sequence

ATGGTCCCTCGTTCGTCCGCTCGCTCATTGATCCCGCAGCCAATCAACAAGCTTCATGTGGTTCTGTCCTACATTCTCTACGCCGTCGTCGATCTTCAACCAGTCATCGCTGCCGCACACGATGAAAATCTGAAGAATGACCATTACCTAATATCTTTGATGGATGACCATGGATGGGTTCCAATATCAGCCATTGCTGAATTCAAAAGGAGAGAAGGGAAACCTAGACATATTGAGAAAGAGAATAAGCTCGCAACCTTGCACGCTGAGGCCGAATATTTCATATATATAGCTAGGTTGAATTGA

Coding sequence (CDS)

ATGGTCCCTCGTTCGTCCGCTCGCTCATTGATCCCGCAGCCAATCAACAAGCTTCATGTGGTTCTGTCCTACATTCTCTACGCCGTCGTCGATCTTCAACCAGTCATCGCTGCCGCACACGATGAAAATCTGAAGAATGACCATTACCTAATATCTTTGATGGATGACCATGGATGGGTTCCAATATCAGCCATTGCTGAATTCAAAAGGAGAGAAGGGAAACCTAGACATATTGAGAAAGAGAATAAGCTCGCAACCTTGCACGCTGAGGCCGAATATTTCATATATATAGCTAGGTTGAATTGA

Protein sequence

MVPRSSARSLIPQPINKLHVVLSYILYAVVDLQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAEFKRREGKPRHIEKENKLATLHAEAEYFIYIARLN
Homology
[Close]
BLAST of CcUC09G178280 vs. NCBI nr
Match: XP_022986432.1 (la-related protein 1A-like [Cucurbita maxima])

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-08
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0 

Query: 10  LIPQPINKLHVVLSYILYAVVD--LQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAE 69
           LIP P+N    +L   + A+ D  ++ +     DENLK DHYLISLMDDHGWVPISAIAE
Sbjct: 278 LIPHPLNARASMLPPDMLALRDNLVKQIEYYFSDENLKKDHYLISLMDDHGWVPISAIAE 337

Query: 70  FKR 71
           FKR
Sbjct: 338 FKR 340

[Close]
BLAST of CcUC09G178280 vs. NCBI nr
Match: KAG6570320.1 (Protein argonaute 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 68.2 bits (165), Expect = 4.7e-08
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 11  IPQPINKLHVVLSYILYAVVD--LQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAEF 70
           IP P+N    +L   + A+ D  ++ +     DENLK DHYLISLMDDHGWVPISAIAEF
Sbjct: 279 IPHPLNARASMLPPDMLALRDNLVKQIEYYFSDENLKKDHYLISLMDDHGWVPISAIAEF 338

[Close]
BLAST of CcUC09G178280 vs. NCBI nr
Match: XP_023512713.1 (la-related protein 1A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512714.1 la-related protein 1A-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 68.2 bits (165), Expect = 4.7e-08
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 11  IPQPINKLHVVLSYILYAVVD--LQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAEF 70
           IP P+N    +L   + A+ D  ++ +     DENLK DHYLISLMDDHGWVPISAIAEF
Sbjct: 279 IPHPLNARASMLPPDMLALRDNLVKQIEYYFSDENLKKDHYLISLMDDHGWVPISAIAEF 338

[Close]
BLAST of CcUC09G178280 vs. NCBI nr
Match: XP_022944219.1 (LOW QUALITY PROTEIN: la-related protein 1A-like [Cucurbita moschata])

HSP 1 Score: 68.2 bits (165), Expect = 4.7e-08
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 11  IPQPINKLHVVLSYILYAVVD--LQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAEF 70
           IP P+N    +L   + A+ D  ++ +     DENLK DHYLISLMDDHGWVPISAIAEF
Sbjct: 279 IPHPLNARASMLPPDMLALRDNLVKQIEYYFSDENLKKDHYLISLMDDHGWVPISAIAEF 338

[Close]
BLAST of CcUC09G178280 vs. NCBI nr
Match: KAG7010213.1 (La-related protein 1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 68.2 bits (165), Expect = 4.7e-08
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 11  IPQPINKLHVVLSYILYAVVD--LQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAEF 70
           IP P+N    +L   + A+ D  ++ +     DENLK DHYLISLMDDHGWVPISAIAEF
Sbjct: 279 IPHPLNARASMLPPDMLALRDNLVKQIEYYFSDENLKKDHYLISLMDDHGWVPISAIAEF 338

[Close]
BLAST of CcUC09G178280 vs. ExPASy Swiss-Prot
Match: Q940X9 (La-related protein 1A OS=Arabidopsis thaliana OX=3702 GN=LARP1A PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.2e-07
Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 0 

Query: 12  PQPINKLHVVLSYILYAVVD--LQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAEFK 71
           P P+N+   +LS     + D  L+ V     DENL+NDHYLISLMD+ GWVP   IA FK
Sbjct: 261 PYPVNQGPPILSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFK 320

[Close]
BLAST of CcUC09G178280 vs. ExPASy TrEMBL
Match: A0A6J1J7I3 (la-related protein 1A-like OS=Cucurbita maxima OX=3661 GN=LOC111484179 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.0e-08
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0 

Query: 10  LIPQPINKLHVVLSYILYAVVD--LQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAE 69
           LIP P+N    +L   + A+ D  ++ +     DENLK DHYLISLMDDHGWVPISAIAE
Sbjct: 278 LIPHPLNARASMLPPDMLALRDNLVKQIEYYFSDENLKKDHYLISLMDDHGWVPISAIAE 337

Query: 70  FKR 71
           FKR
Sbjct: 338 FKR 340

[Close]
BLAST of CcUC09G178280 vs. ExPASy TrEMBL
Match: A0A6J1FWB7 (LOW QUALITY PROTEIN: la-related protein 1A-like OS=Cucurbita moschata OX=3662 GN=LOC111448734 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-08
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 11  IPQPINKLHVVLSYILYAVVD--LQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAEF 70
           IP P+N    +L   + A+ D  ++ +     DENLK DHYLISLMDDHGWVPISAIAEF
Sbjct: 279 IPHPLNARASMLPPDMLALRDNLVKQIEYYFSDENLKKDHYLISLMDDHGWVPISAIAEF 338

[Close]
BLAST of CcUC09G178280 vs. ExPASy TrEMBL
Match: A0A6J1K7U3 (la-related protein 1A OS=Cucurbita maxima OX=3661 GN=LOC111490961 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.9e-08
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 41  DENLKNDHYLISLMDDHGWVPISAIAEFKR 71
           DENLKNDHYLISLM+DHGWVPISAIAEFKR
Sbjct: 312 DENLKNDHYLISLMNDHGWVPISAIAEFKR 341

[Close]
BLAST of CcUC09G178280 vs. ExPASy TrEMBL
Match: A0A6J1H0Y5 (la-related protein 1A OS=Cucurbita moschata OX=3662 GN=LOC111459403 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.9e-08
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 41  DENLKNDHYLISLMDDHGWVPISAIAEFKR 71
           DENLKNDHYLISLM+DHGWVPISAIAEFKR
Sbjct: 312 DENLKNDHYLISLMNDHGWVPISAIAEFKR 341

[Close]
BLAST of CcUC09G178280 vs. ExPASy TrEMBL
Match: A0A0A0KWS8 (HTH La-type RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G269710 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.7e-08
Identity = 36/62 (58.06%), Postives = 42/62 (67.74%), Query Frame = 0 

Query: 11  IPQPINKLHVVLSYILYAVVD--LQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAEF 70
           IP PIN    +L   + A+    ++ +     DENLK DHYLISLMDDHGWVPISAIAEF
Sbjct: 279 IPHPINPRASMLPPDMLALRTNIIKQIEYYFSDENLKTDHYLISLMDDHGWVPISAIAEF 338

[Close]
BLAST of CcUC09G178280 vs. TAIR 10
Match: AT5G21160.1 (LA RNA-binding protein )

HSP 1 Score: 55.5 bits (132), Expect = 3.0e-08
Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 0 

Query: 12  PQPINKLHVVLSYILYAVVD--LQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAEFK 71
           P P+N+   +LS     + D  L+ V     DENL+NDHYLISLMD+ GWVP   IA FK
Sbjct: 261 PYPVNQGPPILSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFK 320

[Close]
BLAST of CcUC09G178280 vs. TAIR 10
Match: AT5G21160.3 (LA RNA-binding protein )

HSP 1 Score: 55.5 bits (132), Expect = 3.0e-08
Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 0 

Query: 12  PQPINKLHVVLSYILYAVVD--LQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAEFK 71
           P P+N+   +LS     + D  L+ V     DENL+NDHYLISLMD+ GWVP   IA FK
Sbjct: 261 PYPVNQGPPILSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFK 320

[Close]
BLAST of CcUC09G178280 vs. TAIR 10
Match: AT5G21160.2 (LA RNA-binding protein )

HSP 1 Score: 55.5 bits (132), Expect = 3.0e-08
Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 0 

Query: 12  PQPINKLHVVLSYILYAVVD--LQPVIAAAHDENLKNDHYLISLMDDHGWVPISAIAEFK 71
           P P+N+   +LS     + D  L+ V     DENL+NDHYLISLMD+ GWVP   IA FK
Sbjct: 261 PYPVNQGPPILSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFK 320

The following BLAST results are available for this feature:
BLAST of CcUC09G178280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022986432.12.1e-0858.73la-related protein 1A-like [Cucurbita maxima][more]
KAG6570320.14.7e-0858.06Protein argonaute 4, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023512713.14.7e-0858.06la-related protein 1A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512714... [more]
XP_022944219.14.7e-0858.06LOW QUALITY PROTEIN: la-related protein 1A-like [Cucurbita moschata][more]
KAG7010213.14.7e-0858.06La-related protein 1A, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CcUC09G178280 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q940X94.2e-0750.82La-related protein 1A OS=Arabidopsis thaliana OX=3702 GN=LARP1A PE=1 SV=1[more]
BLAST of CcUC09G178280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J7I31.0e-0858.73la-related protein 1A-like OS=Cucurbita maxima OX=3661 GN=LOC111484179 PE=4 SV=1[more]
A0A6J1FWB72.3e-0858.06LOW QUALITY PROTEIN: la-related protein 1A-like OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1K7U33.9e-0896.67la-related protein 1A OS=Cucurbita maxima OX=3661 GN=LOC111490961 PE=4 SV=1[more]
A0A6J1H0Y53.9e-0896.67la-related protein 1A OS=Cucurbita moschata OX=3662 GN=LOC111459403 PE=4 SV=1[more]
A0A0A0KWS86.7e-0858.06HTH La-type RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=... [more]
BLAST of CcUC09G178280 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G21160.13.0e-0850.82LA RNA-binding protein [more]
AT5G21160.33.0e-0850.82LA RNA-binding protein [more]
AT5G21160.23.0e-0850.82LA RNA-binding protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 16..91
e-value: 1.3E-9
score: 39.6
NoneNo IPR availablePANTHERPTHR22792:SF101LA-RELATED PROTEIN 1Acoord: 41..70
NoneNo IPR availablePANTHERPTHR22792LUPUS LA PROTEIN-RELATEDcoord: 41..70
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 41..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G178280.1CcUC09G178280.1mRNA