CcUC09G177790 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G177790
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein TIC 214
Location	CicolChr09: 23609673 .. 23610261 (-)
RNA-Seq Expression	CcUC09G177790
Synteny	CcUC09G177790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAATCTAGTATCCTTATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACTACCAGAAACTCANCATTGGAGTAGCTACACGACTAACTTTAAGTATAAGAAGCCGAGTAGGCGGATTGGTCCGAGTGGAGAAAAAAAAAAAAAGGATTGAACTCAAAATATTTTCTGGAGATATACATTTTCCTCGAGAGATGGATAAGATATCCCGACACAATGGCATCTTGATACCACCTGAAAGAGTAAAAAAAAATTCTAAGAAATCAAAAAAATTGAAAAATTGGATTTATGTCCAGTGGATCACACATTTAAACAAACTG

mRNA sequence

GTAATCTAGTATCCTTATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCCCGAGTAGGCGGATTGGTCCGAGTGGAGAAAAAAAAAAAAAGGATTGAACTCAAAATATTTTCTGGAGATATACATTTTCCTCGAGAGATGGATAAGATATCCCGACACAATGGCATCTTGATACCACCTGAAAGAGTAAAAAAAAATTCTAAGAAATCAAAAAAATTGAAAAATTGGATTTATGTCCAGTGGATCACACATTTAAACAAACTG

Coding sequence (CDS)

ATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCCCGAGTAGGCGGATTGGTCCGAGTGGAGAAAAAAAAAAAAAGGATTGAACTCAAAATATTTTCTGGAGATATACATTTTCCTCGAGAGATGGATAAGATATCCCGACACAATGGCATCTTGATACCACCTGAAAGAGTAAAAAAAAATTCTAAGAAATCAAAAAAATTGAAAAATTGGATTTATGTCCAGTGGATCACACATTTAAACAAACTG

Protein sequence

MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPRVGGLVRVEKKKKRIELKIFSGDIHFPREMDKISRHNGILIPPERVKKNSKKSKKLKNWIYVQWITHLNKL

Homology

[Close]

BLAST of CcUC09G177790 vs. NCBI nr
Match: YP_009753666.1 (Ycf1 protein [Trichosanthes wallichiana] >QIT04685.1 Ycf1 protein [Trichosanthes wallichiana])

HSP 1 Score: 159.5 bits (402), Expect = 2.4e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 17 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 76

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 77 YYAPLHLALGRPHTITVLALP 97

[Close]

BLAST of CcUC09G177790 vs. NCBI nr
Match: QJD26342.1 (Ycf1 [Trichosanthes kirilowii] >QJD26429.1 Ycf1 [Trichosanthes kirilowii])

HSP 1 Score: 159.5 bits (402), Expect = 2.4e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. NCBI nr
Match: YP_009430686.1 (photosystem I assembly protein Ycf1 [Gynostemma cardiospermum] >ART65049.1 photosystem I assembly protein Ycf1 [Gynostemma cardiospermum])

HSP 1 Score: 159.5 bits (402), Expect = 2.4e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. NCBI nr
Match: YP_009738261.1 (Ycf1 [Siraitia siamensis] >QIB71654.1 Ycf1 [Siraitia siamensis])

HSP 1 Score: 159.5 bits (402), Expect = 2.4e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. NCBI nr
Match: YP_009440204.1 (hypothetical chloroplast RF19-like protein [Gynostemma longipes] >ATG86915.1 hypothetical chloroplast RF19-like protein [Gynostemma longipes])

HSP 1 Score: 159.5 bits (402), Expect = 2.4e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. ExPASy Swiss-Prot
Match: A6MM95 (Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.1e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. ExPASy Swiss-Prot
Match: A0A393 (Protein TIC 214 OS=Coffea arabica OX=13443 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.1e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. ExPASy Swiss-Prot
Match: Q3C1P6 (Protein TIC 214 OS=Nicotiana sylvestris OX=4096 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-37
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA VMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRALVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. ExPASy Swiss-Prot
Match: Q33BW4 (Protein TIC 214 OS=Nicotiana tomentosiformis OX=4098 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-37
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA VMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRALVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. ExPASy Swiss-Prot
Match: Q2MIC9 (Protein TIC 214 OS=Solanum bulbocastanum OX=147425 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-37
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA VMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRALVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. ExPASy TrEMBL
Match: A0A6M3S424 (Protein TIC 214 OS=Trichosanthes kirilowii OX=3677 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.1e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. ExPASy TrEMBL
Match: A0A6M3RWE9 (Protein TIC 214 OS=Trichosanthes kirilowii OX=3677 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.1e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. ExPASy TrEMBL
Match: A0A1S4EU51 (Protein TIC 214 OS=Cucumis melo OX=3656 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.1e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. ExPASy TrEMBL
Match: A0A1S4EU70 (Protein TIC 214 OS=Cucumis melo OX=3656 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.1e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. ExPASy TrEMBL
Match: A0A249RZD8 (Protein TIC 214 OS=Cucumis melo var. cantalupensis OX=3658 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.1e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI 75

Query: 61 YYAPLHLALGRPHTITVLALP 82
          YYAPLHLALGRPHTITVLALP
Sbjct: 76 YYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of CcUC09G177790 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-37
Identity = 80/84 (95.24%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1   MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMF 60
           MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM   EEGTEKKVSATTGFI GQLMMF
Sbjct: 17  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMMF 76

Query: 61  ISIYYAPLHLALGRPHTITVLALP 82
           ISIYYAPLHLALGRPHTITVLALP
Sbjct: 77  ISIYYAPLHLALGRPHTITVLALP 100

[Close]

BLAST of CcUC09G177790 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein )

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-37
Identity = 80/84 (95.24%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1   MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMF 60
           MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM   EEGTEKKVSATTGFI GQLMMF
Sbjct: 17  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMMF 76

Query: 61  ISIYYAPLHLALGRPHTITVLALP 82
           ISIYYAPLHLALGRPHTITVLALP
Sbjct: 77  ISIYYAPLHLALGRPHTITVLALP 100

[Close]

BLAST of CcUC09G177790 vs. TAIR 10
Match: ATMG00370.1 (Ycf1 protein )

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-37
Identity = 80/84 (95.24%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMF 60
          MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM   EEGTEKKVSATTGFI GQLMMF
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMMF 75

Query: 61 ISIYYAPLHLALGRPHTITVLALP 82
          ISIYYAPLHLALGRPHTITVLALP
Sbjct: 76 ISIYYAPLHLALGRPHTITVLALP 99

[Close]

BLAST of CcUC09G177790 vs. TAIR 10
Match: AT2G07739.1 (Ycf1 protein )

HSP 1 Score: 149.8 bits (377), Expect = 1.7e-36
Identity = 79/84 (94.05%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1  MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMF 60
          MKIINSVVVVGLYYGFLTTFSIGP YLFLLRARVM   EEGTEKKVSATTGFI GQLMMF
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPFYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMMF 75

Query: 61 ISIYYAPLHLALGRPHTITVLALP 82
          ISIYYAPLHLALGRPHTITVLALP
Sbjct: 76 ISIYYAPLHLALGRPHTITVLALP 99

[Close]

BLAST of CcUC09G177790 vs. TAIR 10
Match: ATCG00170.1 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25
Identity = 58/83 (69.88%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 69  LGRPHTITVLALPRVGGLVRVEKKKKRIELKIFSGDIHFPREMDKISRHNGILIPPERVK 128
           +G    +T+    +VGGL+RVEKKKKRIELKIFSGDIHFP + DKISRH+GILIPP R K
Sbjct: 689 IGVDTRLTLNIRSQVGGLIRVEKKKKRIELKIFSGDIHFPDKTDKISRHSGILIPPGRGK 748

Query: 129 KNSKKSKKLKNWIYVQWITHLNK 152
           KNSK+SKK KNWIYVQ IT   K
Sbjct: 749 KNSKESKKFKNWIYVQRITPTKK 771

The following BLAST results are available for this feature:

BLAST of CcUC09G177790 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009753666.1	2.4e-35	100.00	Ycf1 protein [Trichosanthes wallichiana] >QIT04685.1 Ycf1 protein [Trichosanthes...	[more]
QJD26342.1	2.4e-35	100.00	Ycf1 [Trichosanthes kirilowii] >QJD26429.1 Ycf1 [Trichosanthes kirilowii]	[more]
YP_009430686.1	2.4e-35	100.00	photosystem I assembly protein Ycf1 [Gynostemma cardiospermum] >ART65049.1 photo...	[more]
YP_009738261.1	2.4e-35	100.00	Ycf1 [Siraitia siamensis] >QIB71654.1 Ycf1 [Siraitia siamensis]	[more]
YP_009440204.1	2.4e-35	100.00	hypothetical chloroplast RF19-like protein [Gynostemma longipes] >ATG86915.1 hyp...	[more]

BLAST of CcUC09G177790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A6MM95	3.1e-38	100.00	Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1	[more]
A0A393	3.1e-38	100.00	Protein TIC 214 OS=Coffea arabica OX=13443 GN=TIC214 PE=3 SV=1	[more]
Q3C1P6	2.0e-37	98.77	Protein TIC 214 OS=Nicotiana sylvestris OX=4096 GN=TIC214 PE=3 SV=1	[more]
Q33BW4	2.0e-37	98.77	Protein TIC 214 OS=Nicotiana tomentosiformis OX=4098 GN=TIC214 PE=3 SV=1	[more]
Q2MIC9	2.0e-37	98.77	Protein TIC 214 OS=Solanum bulbocastanum OX=147425 GN=TIC214 PE=3 SV=1	[more]

BLAST of CcUC09G177790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6M3S424	1.1e-35	100.00	Protein TIC 214 OS=Trichosanthes kirilowii OX=3677 GN=ycf1 PE=3 SV=1	[more]
A0A6M3RWE9	1.1e-35	100.00	Protein TIC 214 OS=Trichosanthes kirilowii OX=3677 GN=ycf1 PE=3 SV=1	[more]
A0A1S4EU51	1.1e-35	100.00	Protein TIC 214 OS=Cucumis melo OX=3656 GN=ycf1 PE=3 SV=1	[more]
A0A1S4EU70	1.1e-35	100.00	Protein TIC 214 OS=Cucumis melo OX=3656 GN=ycf1 PE=3 SV=1	[more]
A0A249RZD8	1.1e-35	100.00	Protein TIC 214 OS=Cucumis melo var. cantalupensis OX=3658 GN=ycf1 PE=3 SV=1	[more]

BLAST of CcUC09G177790 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01130.1	3.5e-37	95.24	Ycf1 protein	[more]
ATCG01000.1	3.5e-37	95.24	Ycf1 protein	[more]
ATMG00370.1	3.5e-37	95.24	Ycf1 protein	[more]
AT2G07739.1	1.7e-36	94.05	Ycf1 protein	[more]
ATCG00170.1	1.4e-25	69.88	DNA-directed RNA polymerase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PFAM	PF05758	Ycf1	coord: 6..82 e-value: 9.2E-49 score: 166.2
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 1..150
None	No IPR available	PANTHER	PTHR33163:SF13	PROTEIN TIC 214-RELATED	coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G177790.1	CcUC09G177790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane