CcUC09G176710 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACATTTGGGGAATGTAATATTTACCACATTACTATCTGGCTGAATACGTGATATCTTTCCTGATGGAACTTGTGTGCATATCCTTCCCTTGTGGATCCAACTTTCTCATTATCCTAGTGTTTTCTCTGGTAGTACAAAAACAATAGTAGTGTACCATTCTGGTTAGTCAAAGAAGTGCGTGAACTAATACTGATTTTCTTGATACAGAAGGACAAAGTCAATTTGCACATATTGTTGCATTTCTGCGCACGTGGTTGATAAGTGTTATAAGTTGCATGGAAATTCTCCTGGGTACAAGTTCAGACAGTGGAACAATTCGTGCGGCGTCCATTCTCCAAGAGTGGTTGATTTTCACAACAGTGAAAATGATTTGGAAAATCTAGCTTCTGCTGCCATGGCTGATGGAAAGAGTTCCACCGAGAGTTTTGTTTCATCTCTCAGCCAAGGGCAATGTCAAAACCAGACCTTGATGTTAAGTGGTCGTCAATCAGCTGCTAAGGTTTACACTGACACTACAGTTGAAGAATAAAAGGATAGGGAAGTACACAATATCCAGCCTCTTCTTGATTCCTCAAGTACTATTTTTTATTTTTTATTTTTTCTCTTTGACGCATATTCTGGATGTTTTTACTATATTGTCAAATCATGATAACACATTTTTGTTGCACACGTTGGTGAAGCTCGAATATCAT ATGCACATTTGGGGAATAAGGACAAAGTCAATTTGCACATATTGTTGCATTTCTGCGCACGTGGTTGATAAGTGTTATAAGTTGCATGGAAATTCTCCTGGGTACAAGTTCAGACAGTGGAACAATTCGTGCGGCGTCCATTCTCCAAGAGTGGTTGATTTTCACAACAGTGAAAATGATTTGGAAAATCTAGCTTCTGCTGCCATGGCTGATGGAAAGAGTTCCACCGAGAGTTTTGTTTCATCTCTCAGCCAAGGGCAATGTCAAAACCAGACCTTGATGTTAAGTGGTCGTCAATCAGCTGCTAAGGTTTACACTGACACTACAGTTGAAGAATAAAAGGATAGGGAAGTACACAATATCCAGCCTCTTCTTGATTCCTCAAGTACTATTTTTTATTTTTTATTTTTTCTCTTTGACGCATATTCTGGATGTTTTTACTATATTGTCAAATCATGATAACACATTTTTGTTGCACACGTTGGTGAAGCTCGAATATCAT ATGCACATTTGGGGAATAAGGACAAAGTCAATTTGCACATATTGTTGCATTTCTGCGCACGTGGTTGATAAGTGTTATAAGTTGCATGGAAATTCTCCTGGGTACAAGTTCAGACAGTGGAACAATTCGTGCGGCGTCCATTCTCCAAGAGTGGTTGATTTTCACAACAGTGAAAATGATTTGGAAAATCTAGCTTCTGCTGCCATGGCTGATGGAAAGAGTTCCACCGAGAGTTTTGTTTCATCTCTCAGCCAAGGGCAATGTCAAAACCAGACCTTGATGTTAAGTGGTCGTCAATCAGCTGCTAAGGTTTACACTGACACTACAGTTGAAGAATAA MHIWGIRTKSICTYCCISAHVVDKCYKLHGNSPGYKFRQWNNSCGVHSPRVVDFHNSENDLENLASAAMADGKSSTESFVSSLSQGQCQNQTLMLSGRQSAAKVYTDTTVEE Homology
BLAST of CcUC09G176710 vs. NCBI nr
Match: KAA8536734.1 (hypothetical protein F0562_029212 [Nyssa sinensis]) HSP 1 Score: 60.8 bits (146), Expect = 8.4e-06 Identity = 38/101 (37.62%), Postives = 51/101 (50.50%), Query Frame = 0
BLAST of CcUC09G176710 vs. NCBI nr
Match: XP_022145891.1 (uncharacterized protein LOC111015239 [Momordica charantia]) HSP 1 Score: 60.5 bits (145), Expect = 1.1e-05 Identity = 40/108 (37.04%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of CcUC09G176710 vs. NCBI nr
Match: XP_022856063.1 (uncharacterized protein LOC111377235, partial [Olea europaea var. sylvestris]) HSP 1 Score: 57.4 bits (137), Expect = 9.3e-05 Identity = 39/107 (36.45%), Postives = 54/107 (50.47%), Query Frame = 0
BLAST of CcUC09G176710 vs. NCBI nr
Match: XP_022158788.1 (uncharacterized protein LOC111025254 [Momordica charantia]) HSP 1 Score: 56.6 bits (135), Expect = 1.6e-04 Identity = 35/103 (33.98%), Postives = 48/103 (46.60%), Query Frame = 0
BLAST of CcUC09G176710 vs. NCBI nr
Match: XP_022878639.1 (uncharacterized protein LOC111396434 [Olea europaea var. sylvestris]) HSP 1 Score: 56.2 bits (134), Expect = 2.1e-04 Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0
BLAST of CcUC09G176710 vs. ExPASy TrEMBL
Match: A0A5J5B2C5 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_029212 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 4.1e-06 Identity = 38/101 (37.62%), Postives = 51/101 (50.50%), Query Frame = 0
BLAST of CcUC09G176710 vs. ExPASy TrEMBL
Match: A0A6J1CXR2 (uncharacterized protein LOC111015239 OS=Momordica charantia OX=3673 GN=LOC111015239 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 5.3e-06 Identity = 40/108 (37.04%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of CcUC09G176710 vs. ExPASy TrEMBL
Match: A0A6J1DX32 (uncharacterized protein LOC111025254 OS=Momordica charantia OX=3673 GN=LOC111025254 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 7.7e-05 Identity = 35/103 (33.98%), Postives = 48/103 (46.60%), Query Frame = 0
BLAST of CcUC09G176710 vs. ExPASy TrEMBL
Match: A0A5J4ZHF9 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_017116 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.3e-04 Identity = 38/100 (38.00%), Postives = 47/100 (47.00%), Query Frame = 0
BLAST of CcUC09G176710 vs. ExPASy TrEMBL
Match: A0A5J5A1K4 (Retrotrans_gag domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_010359 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.9e-04 Identity = 36/101 (35.64%), Postives = 49/101 (48.51%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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