CcUC09G175640 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAACACTGCCCATTTCAATTCATCTCCATATCTTCAAACTCCTTCTTTTGTCTTTCTTCAATAACATTCTTAAAGCTTGTGCTGTTTGTTTAATCATGGCTGTCTCTTCTTTCTCTTCTGTTTCTGTTTTCGTAATAACTTTGCTTCTCATGCAAAGGCTCTCAGACAGTGCCACATGTAACGATTGTTTCACACGCTCTCGAGCTGCCCATTACCCTAATTCGGAGGAGCAAGGAACAGATCGTAAGTGTTCGCTCTTAGTCTCACATTAGTTCAATTGCAAGTTTAGTACCTGAAATTTCAAGCTCATGTTGATTTAATCTTTCAACTTTAAAAATCTTTGATGTCGTGTGAACTTTCAATTTTATGTTGATAGTAGATTCGTAAATTTTTTTTTAAAAATGTTAAATACAATAAACTAAACATTAGACACAAAAGTGAAAGTTTAAGAGTTTAAGACCTATTCTATACAAGCTTGAAAGTTTAAAAAGTCTATTATATGTTTTTCAAAATCTATCACTAAGAGATAGAAGTTTATCGTGGTCTATCGTCCAATCTATTGCTGATATTTGTAAATATTTTGACTTATTTTGCTATATTTGAAAACATCACTAATTTTTTTTTTTTTTTTAAAAAAAAAAACTTCTTGGTTTTTTTAAAACATTGGTAGAAAGAGGGGGAAAAAATAACAAAAAAAAAAAAAAAAAAAAAATTTAGAGGAAAAAAAAAAATTAGAAAATTTAGTTTTAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTAGAGGTGAAAGTAGAGTTTGCAAATTTAGTTTTCAAAAACTAAAAACAAAAAATGAATTAGGTTATAAAAAGGGACTGGGAAACTAAACTTGTAACTTGGAATTTTTTCTCTCAATACGGCACCATTTGTATAATGTTGTTAATTTTAGTTGAAATTTGGAATTTTTTTTTCTTCTTCTTCTTCTCAGATGGAGCGTGTGGGTATGGATCTTTTGGAGCAACGATTAACGGTGGAGATGTTGCAACTGCCTCTGATCTTTACAGAAATGGCCTTGGTTGTGGAGCTTGTTACCAGGTCAAATATCAAATAAAAATTCAACATATATCTCTCCTACAAATTTTGGATTTTTCATATTTAATAGGTCTAAATTTGGATTTTGGTCTTTATACTCTTAACTTTCGTTCATTTTAGTCCTTGAATTTTAAAAAGTAACAATTTTGGTCCCTTAAGAATGATATAGACATGAAAATAAATGGATCAAAACGGTTACTTTTTTAAAGTATCAACGACCAAAACGAACACTATAAAAGTATATTGACTAAAATAGTACTTAAAACTAGACTATATTGTTGTTGAAATTGGCCTTCTTTTTCCACTAGGATAAGACACCTATTATCATCTTAAAAAGTCGATGATTCCATCACGTTCCACGCCCGCTAAACTTTCATTTTGAAAACGTCATTTCCAAATTCTCGACCAGATCCATTATAGTCTTAATAAAACGAATCAGGATCGGTGATAATCGTAGTTCATCATGAGTAATAATTGTATTGTGTTGGGAATATTGAATAGATAAGATGCATAGACAGTGAATTGTGCTCGGAGAAGGGAACAATGGTGGTGATAACGGATCAAGGGTCAGGGCCAGGTGATTTTATAATGAGCCAAAGAGCCTATGCTGGGTTGGCTCAAACCCCTTATGCTGCTGCTTCTCTGATGGCACTTGGTGTCATTGACATTGAATACAAACGGTTAGTTTTCTCCAACGATCTTTGCATTTCCATTTTAATAATTTCTACTTTGTCATTCACTGCAATTATTTGAGTCCAAGTGATGAGTTCTTTTGTATATGGATATCATCCAAACCATAAATATGAAACATTACGATCTAACAGTGAATATATGTTTGAATAATTAAACAATCATGTCTTTTGTTAAGTTACAACTATTCGAGTTGAAGTAGTTACATGACGAAGTGATATGTTGATACAAATATCAGCGTGTGTGATATAGACCGTAGATATAAAACGTTTAAATTTAATAATAGAGACATATTTGAATAAATAATCACGTTTTTTGTCATTTAAAATTTCATTTTTTTTTTTTTTTTAAAGTTTAAAGTTGTTCTTTTGATGGTGTGTCAGCAATCTTCTCTCTTTTAAATTTTAAAGTGAAAACTATTCACACCCTCTTAAAAAGAAAAAGAAAAGGAAAGAAAAAGAAAAAGCTCCACTTTAGACAAAATTTTTTTTTTTTTTTTTTTTTGTTTCTTTTAGATCGATGGTAACATCATCTTTTGTTTTTCTTTTTTAGGAAAATAATTTTGAATTTTGGCCTACAAAAAGCATAAAGACTTTTTTCTCCCTCTTTTAATTACTAATGTATGAGAAAAACTACGTATCGTGTAAATTTTTTAATCTGCACTTCCAATAGTTATTAAGAGACAACCGCAATTATTGAATAATTTTTCTTTGGTTTCTCTTTGGGTGAAAAAGATTAACTCAAAGAGTGAAGAGATAACCATTAGAAGAAATACACTTTTATTAGAAAATAAAAGTATAAAGATGGACACTTTTGAGAGTCTCTCCTCATTCACTTTTTTCTTATTATATATATAATAGCTTACTTATGGACAAGGTTTTTTTTTTATTTTTTAATTTTTATGTTTCGTGGATTTTTCTACAATACAATGAAAATACCCTCATGTCGATGTGGATGTAGAACCCATCGAAACATGGAAATATCAATAGAAACGTTGCTATGCTTATGGGGTACGTACAAGTCCTATTTATTTATACTCTAAACCGAAACTAAAATATCTTAGATTTGGAGGTATTTAGTGGAAAAAAGGTTTTGGTGGATAGTTAGGATTAGGATTACATTGGTGTTTATAATTATTGTAACCCTATTTTTGTTGTGTTTGTGGAAAAGAGTGGGTTGCAGCTACCCAAACAGAAACATAACAATAAAGATCGATGAAAACAGTAATGCTCCTCATTATTTGGCCTTTGTCATAAGATTTCAACAAGGCAAAAATGATATCACCGCCGTTCAACTTTGCGAGGTATCTTTCAATATCATCATAATACTCTTTCTGTTTAAATTCTTCTTCTGTCTCTTAAAAATATTAGTAATTAAGATATTTCAAGTTTAACGAACAAAGGCCTCAACTATTTAATCTCAACTACTCAAACTTATTAATATGGTGAGCTATTTGCAGACGAAGAACTTCGTGTGCAAGCTATTAGATCGGAGCTACGGTACCGTGTGGACGACGGCTTCCCCGCCGAGGGGACCGTTGTCGTTGAGAATGTTGCTGACAAATGACGATGGAGATGAGCAATGGATAGTCCCCATTAATGATATTCCTCGTGACTGGAAGGCTGGGGATATCTACGACACTGGAGTTCAAGTTAATTAAATCCATCATTCTATATATATATATATAATATTCTTCATAGTTTTATTTCAAATAAATCTCCCACTGGGCAATTGTTGTTTTCCCAGATGAGAATATTCAAATTCTTCTTACATTTTGTTTGGTTTTGAAATTGGAATATTTGGCTAAGTATAGTTATTGATCATGTATAATCATTCTATTTATTTGATTGGGTGTATGCCATTTTTTA CAAAAACACTGCCCATTTCAATTCATCTCCATATCTTCAAACTCCTTCTTTTGTCTTTCTTCAATAACATTCTTAAAGCTTGTGCTGTTTGTTTAATCATGGCTGTCTCTTCTTTCTCTTCTGTTTCTGTTTTCGTAATAACTTTGCTTCTCATGCAAAGGCTCTCAGACAGTGCCACATGTAACGATTGTTTCACACGCTCTCGAGCTGCCCATTACCCTAATTCGGAGGAGCAAGGAACAGATCATGGAGCGTGTGGGTATGGATCTTTTGGAGCAACGATTAACGGTGGAGATGTTGCAACTGCCTCTGATCTTTACAGAAATGGCCTTGGTTGTGGAGCTTGTTACCAGATAAGATGCATAGACAGTGAATTGTGCTCGGAGAAGGGAACAATGGTGGTGATAACGGATCAAGGGTCAGGGCCAGGTGATTTTATAATGAGCCAAAGAGCCTATGCTGGGTTGGCTCAAACCCCTTATGCTGCTGCTTCTCTGATGGCACTTGGTGTCATTGACATTGAATACAAACGATCGATGTTACTAATAGTGGGTTGCAGCTACCCAAACAGAAACATAACAATAAAGATCGATGAAAACAGTAATGCTCCTCATTATTTGGCCTTTGTCATAAGATTTCAACAAGGCAAAAATGATATCACCGCCGTTCAACTTTGCGAGACGAAGAACTTCGTGTGCAAGCTATTAGATCGGAGCTACGGTACCGTGTGGACGACGGCTTCCCCGCCGAGGGGACCGTTGTCGTTGAGAATGTTGCTGACAAATGACGATGGAGATGAGCAATGGATAGTCCCCATTAATGATATTCCTCGTGACTGGAAGGCTGGGGATATCTACGACACTGGAGTTCAAGTTAATTAAATCCATCATTCTATATATATATATATAATATTCTTCATAGTTTTATTTCAAATAAATCTCCCACTGGGCAATTGTTGTTTTCCCAGATGAGAATATTCAAATTCTTCTTACATTTTGTTTGGTTTTGAAATTGGAATATTTGGCTAAGTATAGTTATTGATCATGTATAATCATTCTATTTATTTGATTGGGTGTATGCCATTTTTTA ATGGCTGTCTCTTCTTTCTCTTCTGTTTCTGTTTTCGTAATAACTTTGCTTCTCATGCAAAGGCTCTCAGACAGTGCCACATGTAACGATTGTTTCACACGCTCTCGAGCTGCCCATTACCCTAATTCGGAGGAGCAAGGAACAGATCATGGAGCGTGTGGGTATGGATCTTTTGGAGCAACGATTAACGGTGGAGATGTTGCAACTGCCTCTGATCTTTACAGAAATGGCCTTGGTTGTGGAGCTTGTTACCAGATAAGATGCATAGACAGTGAATTGTGCTCGGAGAAGGGAACAATGGTGGTGATAACGGATCAAGGGTCAGGGCCAGGTGATTTTATAATGAGCCAAAGAGCCTATGCTGGGTTGGCTCAAACCCCTTATGCTGCTGCTTCTCTGATGGCACTTGGTGTCATTGACATTGAATACAAACGATCGATGTTACTAATAGTGGGTTGCAGCTACCCAAACAGAAACATAACAATAAAGATCGATGAAAACAGTAATGCTCCTCATTATTTGGCCTTTGTCATAAGATTTCAACAAGGCAAAAATGATATCACCGCCGTTCAACTTTGCGAGACGAAGAACTTCGTGTGCAAGCTATTAGATCGGAGCTACGGTACCGTGTGGACGACGGCTTCCCCGCCGAGGGGACCGTTGTCGTTGAGAATGTTGCTGACAAATGACGATGGAGATGAGCAATGGATAGTCCCCATTAATGATATTCCTCGTGACTGGAAGGCTGGGGATATCTACGACACTGGAGTTCAAGTTAATTAA MAVSSFSSVSVFVITLLLMQRLSDSATCNDCFTRSRAAHYPNSEEQGTDHGACGYGSFGATINGGDVATASDLYRNGLGCGACYQIRCIDSELCSEKGTMVVITDQGSGPGDFIMSQRAYAGLAQTPYAAASLMALGVIDIEYKRSMLLIVGCSYPNRNITIKIDENSNAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTASPPRGPLSLRMLLTNDDGDEQWIVPINDIPRDWKAGDIYDTGVQVN Homology
BLAST of CcUC09G175640 vs. NCBI nr
Match: XP_038887480.1 (expansin-like B1 [Benincasa hispida]) HSP 1 Score: 498.0 bits (1281), Expect = 4.8e-137 Identity = 242/260 (93.08%), Postives = 248/260 (95.38%), Query Frame = 0
BLAST of CcUC09G175640 vs. NCBI nr
Match: XP_004148502.1 (expansin-like B1 [Cucumis sativus] >KGN60430.1 hypothetical protein Csa_001387 [Cucumis sativus]) HSP 1 Score: 497.3 bits (1279), Expect = 8.1e-137 Identity = 242/260 (93.08%), Postives = 249/260 (95.77%), Query Frame = 0
BLAST of CcUC09G175640 vs. NCBI nr
Match: XP_016903525.1 (PREDICTED: expansin-like B1 [Cucumis melo] >QDL52564.1 expansin B1-like protein [Cucumis melo]) HSP 1 Score: 492.3 bits (1266), Expect = 2.6e-135 Identity = 239/260 (91.92%), Postives = 248/260 (95.38%), Query Frame = 0
BLAST of CcUC09G175640 vs. NCBI nr
Match: XP_022971994.1 (expansin-like B1 [Cucurbita maxima]) HSP 1 Score: 485.3 bits (1248), Expect = 3.2e-133 Identity = 236/260 (90.77%), Postives = 248/260 (95.38%), Query Frame = 0
BLAST of CcUC09G175640 vs. NCBI nr
Match: KAG7011513.1 (Expansin-like B1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 481.9 bits (1239), Expect = 3.5e-132 Identity = 234/260 (90.00%), Postives = 248/260 (95.38%), Query Frame = 0
BLAST of CcUC09G175640 vs. ExPASy Swiss-Prot
Match: Q850K7 (Expansin-like B1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLB1 PE=2 SV=2) HSP 1 Score: 271.2 bits (692), Expect = 1.2e-71 Identity = 128/237 (54.01%), Postives = 170/237 (71.73%), Query Frame = 0
BLAST of CcUC09G175640 vs. ExPASy Swiss-Prot
Match: Q10S70 (Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.8e-46 Identity = 102/253 (40.32%), Postives = 152/253 (60.08%), Query Frame = 0
BLAST of CcUC09G175640 vs. ExPASy Swiss-Prot
Match: Q7XCL0 (Expansin-like A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA2 PE=2 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 3.2e-43 Identity = 101/261 (38.70%), Postives = 148/261 (56.70%), Query Frame = 0
BLAST of CcUC09G175640 vs. ExPASy Swiss-Prot
Match: O23547 (Expansin-like B1 OS=Arabidopsis thaliana OX=3702 GN=EXLB1 PE=2 SV=2) HSP 1 Score: 174.5 bits (441), Expect = 1.6e-42 Identity = 103/249 (41.37%), Postives = 138/249 (55.42%), Query Frame = 0
BLAST of CcUC09G175640 vs. ExPASy Swiss-Prot
Match: Q9SVE5 (Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 9.6e-40 Identity = 87/253 (34.39%), Postives = 144/253 (56.92%), Query Frame = 0
BLAST of CcUC09G175640 vs. ExPASy TrEMBL
Match: A0A0A0LEH3 (Major pollen allergen Ory s 1 OS=Cucumis sativus OX=3659 GN=Csa_3G910670 PE=4 SV=1) HSP 1 Score: 497.3 bits (1279), Expect = 3.9e-137 Identity = 242/260 (93.08%), Postives = 249/260 (95.77%), Query Frame = 0
BLAST of CcUC09G175640 vs. ExPASy TrEMBL
Match: A0A1S4E6D3 (Expansin B1-like protein OS=Cucumis melo OX=3656 GN=LOC103503501 PE=2 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 1.3e-135 Identity = 239/260 (91.92%), Postives = 248/260 (95.38%), Query Frame = 0
BLAST of CcUC09G175640 vs. ExPASy TrEMBL
Match: A0A6J1IA62 (expansin-like B1 OS=Cucurbita maxima OX=3661 GN=LOC111470646 PE=3 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133 Identity = 236/260 (90.77%), Postives = 248/260 (95.38%), Query Frame = 0
BLAST of CcUC09G175640 vs. ExPASy TrEMBL
Match: A0A6J1GJE5 (expansin-like B1 OS=Cucurbita moschata OX=3662 GN=LOC111454830 PE=3 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 6.5e-132 Identity = 233/260 (89.62%), Postives = 247/260 (95.00%), Query Frame = 0
BLAST of CcUC09G175640 vs. ExPASy TrEMBL
Match: A0A5A7TAB6 (Expansin-like B1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004070 PE=3 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 6.7e-129 Identity = 224/242 (92.56%), Postives = 232/242 (95.87%), Query Frame = 0
BLAST of CcUC09G175640 vs. TAIR 10
Match: AT4G17030.1 (expansin-like B1 ) HSP 1 Score: 174.5 bits (441), Expect = 1.1e-43 Identity = 103/249 (41.37%), Postives = 138/249 (55.42%), Query Frame = 0
BLAST of CcUC09G175640 vs. TAIR 10
Match: AT4G38400.1 (expansin-like A2 ) HSP 1 Score: 165.2 bits (417), Expect = 6.8e-41 Identity = 87/253 (34.39%), Postives = 144/253 (56.92%), Query Frame = 0
BLAST of CcUC09G175640 vs. TAIR 10
Match: AT3G45970.1 (expansin-like A1 ) HSP 1 Score: 163.3 bits (412), Expect = 2.6e-40 Identity = 89/254 (35.04%), Postives = 146/254 (57.48%), Query Frame = 0
BLAST of CcUC09G175640 vs. TAIR 10
Match: AT3G45960.2 (expansin-like A3 ) HSP 1 Score: 159.1 bits (401), Expect = 4.9e-39 Identity = 82/253 (32.41%), Postives = 141/253 (55.73%), Query Frame = 0
BLAST of CcUC09G175640 vs. TAIR 10
Match: AT3G45960.1 (expansin-like A3 ) HSP 1 Score: 141.7 bits (356), Expect = 8.1e-34 Identity = 67/199 (33.67%), Postives = 112/199 (56.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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