CcUC09G174610 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G174610
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionReceptor-like protein kinase
LocationCicolChr09: 11197696 .. 11201332 (+)
RNA-Seq ExpressionCcUC09G174610
SyntenyCcUC09G174610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGTAGTTACCTAATAAGAAATTTTGATATTTTAAAAAACTAAATATTATCCTTTAATTTGAAAGTCAACATATTTGTTTGTTAGTTATTATTATATATATATATATTTTTTTTTCTTTTTATGAAAAATAATTGCTTTATATAAATGTTGAAAAATAATTCGTCAAAAAGAAAAAAAAAAAAAAATGCATCGGATACTGAACTCTGAAGCATCCGCGGCCGCCGAGGAAGGGACGCTACCAAAGAAAGCTGAAGAAGGCAAAGTCTGTGGCTGCATAGAAAATAATTTAAAGTGACAGTCAGTGACCATTCTCTTTTTAACACCTGAATTCCTCCCCCTTTTCTCTTCCCAAATTGCCCTTTTCTCTTTTCACTTCTTTGTTTTTTAGGAACTACCATTGTCCCAATTTCATGCTTATAAATGTTGTTTGACTAACATTTTTAAAATAACCAACAATAAAGCCTTGCTCGGTTCAGAATTGTTTTCATACTTAATTTTAGTAAATGTGTGTTTAAGCAAACAATCGAAATTCTTTTTTGGACGGAGGAATTCGAGTGGTGCAATTTCTACAAATAATATTTAATTTTCATGTTTTTATTGTATCTAAATTTTAAATGCAAATTTATATTAAATAAAGATAAAAATATTTAAATATACACTACGTTCTTTATATAAATTCAATTTATTTTCTAAAAAATATAATATGTATTGTGTAATGTATTATAAATTATATAATATTACAACATAACAATTATGTAAATTTTTGTAACATAAATCATATTCATAAATAAATCAACGATGGTTTATTGTCAACTAAATACTAGTTTTGTGATGTAACAACCCCAAATCGTTGGGGTAAATCCTCTTAGTAAATAAGTTTAAGTTATTATGTGTGAAAAAAAAAAGATAATAATAATAAAAATATAGTTATCCTTATATATTCATGCCTTTATTTAAGCTAAGTTGGAATTTAGAAATTTGAGCTAAGGAAAAATTTGGAATTTAGAAAAAAAAAAAAAAAAGATAATTTTATCTTAGGGCAAGTAAAATAAGGTGATTAATTTTGGTGGGATTGGATAATTGAAGTAAATCTTGGTTGTAGAAGATTTTATTTGATTTTATTTGGATAATTGAAGTAAATCTTGGTTGTAGAAGATTTTATTTGATTTTATTTTGTTTGGTTGGAAAAGAAAAGGGGAAAGGAGGAAGGAATAGGGAATTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGGTCCTTCGGGGTCACCAGAGGTTGTGTTCCTTCGGGTTCACCAGATTTTGTGGTCCTTCGGGGTCACCAGAGGTTGTGATCCTTCGGGTTCACCAGATATTGTGGTCCTTCGGGGTCACCATAGGTTGTGTTCCTTCGGGTTCACCAGAGGTTTGTGGTCTTTCGGGATCACCAGAGGTTTGTGTTCCTTCGGGATCACCAGAGGTTGAGTTCCTTCGGGGCTCCAGAGGTTAGTGGACATCCAAAACCAACTGTAGGGCGAGTATAACCAGTTCCCTATAAAAGTTTGTTAGATGCGCATGTCTTATTGTTGTTGCACTTAAAGGACTTGGGTGCGAGCCAGTCCCCTATGAAAGTATGTTAGATATGCCTGTCTTAAGGCTAATGCACTTAAAGGACTTGGGTGCCAGTATAACCAGTTTCCTATTGAAGTATGTTGATATGCCTGTTGTATGACTAATGCACTTAAAGGACTTGGGTGCCTAGCCTGGCTCCGGTAGTGGGGTCACTTACTGAGCAATATAATTGCTCACCCTTTCATCTTATTTTTTTCAGGTAAGGGAAAGAACATGCTGGCGAATGACAAGAGGAATCCTTGATGGCTTCACGGGACCCATAGTAGCTTCCGCCTAGCACTGCATTTTTTTTTAGGCTTGTCTTTTATTTTGTATATGGATTTTGTTTTTGTTTTTTGTTCATGGAATTTTGTTGATTTTATTAGGGGTACCCCAAACCAAAAATTCTTTCTATATGGGATTAAATAAAACAGAAATTTCCGTAAGTAGCATTGTTTCTTTCTTATTACTCAGCGTCGGGTCTTTTCTTGAAATTTGCATGCATTGAGTAATGGTCTGATTAGGATGTATTAGTCGGGTCGTTACATGTGATGTATAAATATATAGTGTTGAACACATTTTAAACAATTGTTTAAATTAGAATCTAATTTCTAATTCTGCTACTGAATACATATGTGAAAACATGAAATATAACTATGTTTTCATTAAATCTCTTGTTTTCAAATTCTCTATCAAACATGCCCTAACTTTTTGCTAATGTTTCGAATCACTTGTCTACTTTTGAAGTGCAGTCCACGAGCACGAAAGAGTAAAGAAAGAAGGGCTCAAACGTGTGAGAGCAGTATTATATTAGATTAGTTGAACACAAGAGAGAGTGAATGCAAAAGTGTGATGGCAATAAAATATTATACATCCTTCTTTTCAAAATGTGGGCCAAAGAGCACTTCAATGGTGAAATTTAGGTAATCCGTGTGAAATCTATAAGGTTTGCAAGTTTAAAAAATAAGGATGTAGCTATAACTATTTTGTATTTTTTATACAACAACTAGACTATTGGAGATAAATTAAATTAGCAAAAATTGCAAAAACCATCCCTAAACTATTGGGTTGACTATAATCACACTCTTGAATTTTCAATTTGATCAATTAACCCCTTGTAGTTTCATGATGGTTGCAATCAGGCGCTTCTATTGAATTAAATTTTATCTGTGGATATTTGTGTTTCTCCTCCTCTCTATTATTCTTTCTCCTCCCTCTTCATCATCTTCATTCTCATCTCTCTTTTTAATTCTACAACAATTAATTAATGAGACACTTCCCGTGGGATTAAGAAATCTTACGAGGCTTAAGAATTTTGATGCTTCCTTGAATCAAATTCATGGTGATTTATCAAAGTTGAGGTTTTTGACAAACTTGATTTCTTTGCAGCTGTTTGAAAGTCAAATCTCCAGCAAATTCTAGTGGAGTTTGATGAATTGAAGTCGCTTGTGAATATCTCCTTTTACAAGAACAAACTTATGAGGCCTCTTCTGCAATTAATTGGTTCTTTGATGGCGTTTGACTTCATAGATGTATCCAAAAATTTCTTGACAGGGTTGATTCCTCCTGGAGATGATGCGGAAGCTTCTCATTCTTTAAAACAACTTCATCAATGA

mRNA sequence

ATGTTTGCATCCGCGGCCGCCGAGGAAGGGACGCTACCAAAGAAAGCTGAAGAAGGCAAATCAAATCTCCAGCAAATTCTAGTGGAGTTTGATGAATTGAAGTCGCTTGTGAATATCTCCTTTTACAAGAACAAACTTATGAGGCCTCTTCTGCAATTAATTGGTTCTTTGATGGCGTTTGACTTCATAGATGTATCCAAAAATTTCTTGACAGGGTTGATTCCTCCTGGAGATGATGCGGAAGCTTCTCATTCTTTAAAACAACTTCATCAATGA

Coding sequence (CDS)

ATGTTTGCATCCGCGGCCGCCGAGGAAGGGACGCTACCAAAGAAAGCTGAAGAAGGCAAATCAAATCTCCAGCAAATTCTAGTGGAGTTTGATGAATTGAAGTCGCTTGTGAATATCTCCTTTTACAAGAACAAACTTATGAGGCCTCTTCTGCAATTAATTGGTTCTTTGATGGCGTTTGACTTCATAGATGTATCCAAAAATTTCTTGACAGGGTTGATTCCTCCTGGAGATGATGCGGAAGCTTCTCATTCTTTAAAACAACTTCATCAATGA

Protein sequence

MFASAAAEEGTLPKKAEEGKSNLQQILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPPGDDAEASHSLKQLHQ
Homology
BLAST of CcUC09G174610 vs. NCBI nr
Match: XP_038897449.1 (receptor-like protein kinase 7 [Benincasa hispida])

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-10
Identity = 39/52 (75.00%), Postives = 42/52 (80.77%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           +I VEF E KSLVN+S YKNKL  PL Q IGS  AFDFIDVS+NFLTGLIPP
Sbjct: 298 EIPVEFGEFKSLVNLSLYKNKLTGPLPQSIGSWTAFDFIDVSENFLTGLIPP 349

BLAST of CcUC09G174610 vs. NCBI nr
Match: KAA0038638.1 (receptor-like protein kinase HAIKU2 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 3.9e-09
Identity = 36/52 (69.23%), Postives = 40/52 (76.92%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           Q+ VEF E KSLVN+S YKNKL  PL Q IGS   FD+IDVS+NFLTG IPP
Sbjct: 299 QVPVEFGEFKSLVNLSLYKNKLTGPLPQSIGSWTEFDYIDVSENFLTGSIPP 350

BLAST of CcUC09G174610 vs. NCBI nr
Match: XP_008466102.1 (PREDICTED: receptor-like protein kinase HAIKU2 [Cucumis melo] >TYK31239.1 receptor-like protein kinase HAIKU2 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 3.9e-09
Identity = 36/52 (69.23%), Postives = 40/52 (76.92%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           Q+ VEF E KSLVN+S YKNKL  PL Q IGS   FD+IDVS+NFLTG IPP
Sbjct: 299 QVPVEFGEFKSLVNLSLYKNKLTGPLPQSIGSWTEFDYIDVSENFLTGSIPP 350

BLAST of CcUC09G174610 vs. NCBI nr
Match: XP_004136412.1 (receptor-like protein kinase 7 [Cucumis sativus] >KGN60296.1 hypothetical protein Csa_000768 [Cucumis sativus])

HSP 1 Score: 71.2 bits (173), Expect = 5.0e-09
Identity = 36/52 (69.23%), Postives = 40/52 (76.92%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           QI VEF E KSLVN+S YKNKL  P+ Q IGS   FD+IDVS+NFLTG IPP
Sbjct: 299 QIPVEFGEFKSLVNLSLYKNKLTGPIPQSIGSWTEFDYIDVSENFLTGSIPP 350

BLAST of CcUC09G174610 vs. NCBI nr
Match: KAG7024597.1 (Receptor-like protein kinase HAIKU2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 70.5 bits (171), Expect = 8.6e-09
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0

Query: 28  VEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           VEF E KSLVN+S Y+N+L  PL Q IGS  AFDFIDVS+NFLTG IPP
Sbjct: 300 VEFGEFKSLVNLSLYRNRLTGPLPQSIGSWAAFDFIDVSENFLTGSIPP 348

BLAST of CcUC09G174610 vs. ExPASy Swiss-Prot
Match: F4I2N7 (Receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=RLK7 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-08
Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           +I +EF E K LVN+S Y NKL   L Q +GSL  FDFID S+N LTG IPP
Sbjct: 305 EIPLEFGEFKDLVNLSLYTNKLTGSLPQGLGSLADFDFIDASENLLTGPIPP 356

BLAST of CcUC09G174610 vs. ExPASy Swiss-Prot
Match: Q9LJM4 (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana OX=3702 GN=IKU2 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.4e-06
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           +I  EF + KSL  +S Y+N+L   L + +GS  AF +IDVS+NFL G IPP
Sbjct: 307 EIPKEFGDFKSLAALSLYRNQLTGKLPRRLGSWTAFKYIDVSENFLEGQIPP 358

BLAST of CcUC09G174610 vs. ExPASy TrEMBL
Match: A0A5D3E5X6 (Receptor-like protein kinase HAIKU2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005270 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 36/52 (69.23%), Postives = 40/52 (76.92%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           Q+ VEF E KSLVN+S YKNKL  PL Q IGS   FD+IDVS+NFLTG IPP
Sbjct: 299 QVPVEFGEFKSLVNLSLYKNKLTGPLPQSIGSWTEFDYIDVSENFLTGSIPP 350

BLAST of CcUC09G174610 vs. ExPASy TrEMBL
Match: A0A5A7T707 (Receptor-like protein kinase HAIKU2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001710 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 36/52 (69.23%), Postives = 40/52 (76.92%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           Q+ VEF E KSLVN+S YKNKL  PL Q IGS   FD+IDVS+NFLTG IPP
Sbjct: 299 QVPVEFGEFKSLVNLSLYKNKLTGPLPQSIGSWTEFDYIDVSENFLTGSIPP 350

BLAST of CcUC09G174610 vs. ExPASy TrEMBL
Match: A0A1S3CQF8 (receptor-like protein kinase HAIKU2 OS=Cucumis melo OX=3656 GN=LOC103503626 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 36/52 (69.23%), Postives = 40/52 (76.92%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           Q+ VEF E KSLVN+S YKNKL  PL Q IGS   FD+IDVS+NFLTG IPP
Sbjct: 299 QVPVEFGEFKSLVNLSLYKNKLTGPLPQSIGSWTEFDYIDVSENFLTGSIPP 350

BLAST of CcUC09G174610 vs. ExPASy TrEMBL
Match: A0A0A0LJT1 (Receptor protein kinase CLAVATA1 OS=Cucumis sativus OX=3659 GN=Csa_3G893950 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.4e-09
Identity = 36/52 (69.23%), Postives = 40/52 (76.92%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           QI VEF E KSLVN+S YKNKL  P+ Q IGS   FD+IDVS+NFLTG IPP
Sbjct: 299 QIPVEFGEFKSLVNLSLYKNKLTGPIPQSIGSWTEFDYIDVSENFLTGSIPP 350

BLAST of CcUC09G174610 vs. ExPASy TrEMBL
Match: A0A6J1FAA2 (receptor-like protein kinase HAIKU2 OS=Cucurbita moschata OX=3662 GN=LOC111443714 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.1e-09
Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = 0

Query: 28  VEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           VEF E KSLVN+S Y+N+L  PL   IGS  AFDFIDVS+NF TGLIPP
Sbjct: 300 VEFGEFKSLVNLSLYRNRLTGPLPHAIGSWAAFDFIDVSENFFTGLIPP 348

BLAST of CcUC09G174610 vs. TAIR 10
Match: AT1G09970.1 (Leucine-rich receptor-like protein kinase family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-09
Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           +I +EF E K LVN+S Y NKL   L Q +GSL  FDFID S+N LTG IPP
Sbjct: 305 EIPLEFGEFKDLVNLSLYTNKLTGSLPQGLGSLADFDFIDASENLLTGPIPP 356

BLAST of CcUC09G174610 vs. TAIR 10
Match: AT1G09970.2 (Leucine-rich receptor-like protein kinase family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-09
Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           +I +EF E K LVN+S Y NKL   L Q +GSL  FDFID S+N LTG IPP
Sbjct: 305 EIPLEFGEFKDLVNLSLYTNKLTGSLPQGLGSLADFDFIDASENLLTGPIPP 356

BLAST of CcUC09G174610 vs. TAIR 10
Match: AT3G19700.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 51.6 bits (122), Expect = 3.9e-07
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0

Query: 25  QILVEFDELKSLVNISFYKNKLMRPLLQLIGSLMAFDFIDVSKNFLTGLIPP 77
           +I  EF + KSL  +S Y+N+L   L + +GS  AF +IDVS+NFL G IPP
Sbjct: 307 EIPKEFGDFKSLAALSLYRNQLTGKLPRRLGSWTAFKYIDVSENFLEGQIPP 358

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038897449.11.6e-1075.00receptor-like protein kinase 7 [Benincasa hispida][more]
KAA0038638.13.9e-0969.23receptor-like protein kinase HAIKU2 [Cucumis melo var. makuwa][more]
XP_008466102.13.9e-0969.23PREDICTED: receptor-like protein kinase HAIKU2 [Cucumis melo] >TYK31239.1 recept... [more]
XP_004136412.15.0e-0969.23receptor-like protein kinase 7 [Cucumis sativus] >KGN60296.1 hypothetical protei... [more]
KAG7024597.18.6e-0971.43Receptor-like protein kinase HAIKU2, partial [Cucurbita argyrosperma subsp. argy... [more]
Match NameE-valueIdentityDescription
F4I2N71.5e-0859.62Receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=RLK7 PE=1 SV=1[more]
Q9LJM45.4e-0650.00Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana OX=3702 GN=IKU2 PE=1... [more]
Match NameE-valueIdentityDescription
A0A5D3E5X61.9e-0969.23Receptor-like protein kinase HAIKU2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7T7071.9e-0969.23Receptor-like protein kinase HAIKU2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A1S3CQF81.9e-0969.23receptor-like protein kinase HAIKU2 OS=Cucumis melo OX=3656 GN=LOC103503626 PE=3... [more]
A0A0A0LJT12.4e-0969.23Receptor protein kinase CLAVATA1 OS=Cucumis sativus OX=3659 GN=Csa_3G893950 PE=3... [more]
A0A6J1FAA27.1e-0969.39receptor-like protein kinase HAIKU2 OS=Cucurbita moschata OX=3662 GN=LOC11144371... [more]
Match NameE-valueIdentityDescription
AT1G09970.11.1e-0959.62Leucine-rich receptor-like protein kinase family protein [more]
AT1G09970.21.1e-0959.62Leucine-rich receptor-like protein kinase family protein [more]
AT3G19700.13.9e-0750.00Leucine-rich repeat protein kinase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 11..91
e-value: 2.1E-5
score: 26.0
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 29..75

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G174610.1CcUC09G174610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006950 response to stress
cellular_component GO:0005886 plasma membrane
molecular_function GO:0016301 kinase activity
molecular_function GO:0000166 nucleotide binding